View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18034_high_16 (Length: 251)

Name: NF18034_high_16
Description: NF18034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18034_high_16
NF18034_high_16
[»] chr2 (11 HSPs)
chr2 (1-242)||(36452346-36452582)
chr2 (82-154)||(37153924-37153996)
chr2 (82-153)||(7833325-7833396)
chr2 (82-153)||(44587673-44587744)
chr2 (82-151)||(25903729-25903798)
chr2 (87-156)||(45651020-45651089)
chr2 (88-140)||(4860275-4860326)
chr2 (83-151)||(8996794-8996862)
chr2 (87-123)||(12486065-12486101)
chr2 (94-122)||(41120030-41120058)
chr2 (106-154)||(41464756-41464804)
[»] chr1 (12 HSPs)
chr1 (62-156)||(101516-101610)
chr1 (63-156)||(101492-101584)
chr1 (63-156)||(40212293-40212386)
chr1 (72-152)||(35944074-35944154)
chr1 (91-154)||(22819176-22819239)
chr1 (88-156)||(39514974-39515042)
chr1 (77-145)||(50105685-50105753)
chr1 (65-112)||(897091-897138)
chr1 (90-122)||(8174165-8174197)
chr1 (63-155)||(22819174-22819266)
chr1 (92-156)||(35944090-35944154)
chr1 (87-155)||(51590471-51590539)
[»] chr4 (17 HSPs)
chr4 (82-154)||(12766883-12766955)
chr4 (82-156)||(54357924-54357998)
chr4 (95-156)||(6724914-6724975)
chr4 (45-153)||(50533369-50533475)
chr4 (91-150)||(10554940-10554999)
chr4 (91-156)||(12766884-12766949)
chr4 (87-151)||(20114104-20114168)
chr4 (87-122)||(21861120-21861155)
chr4 (87-122)||(21916983-21917018)
chr4 (91-154)||(56491115-56491178)
chr4 (87-153)||(26066412-26066478)
chr4 (106-156)||(54673350-54673400)
chr4 (82-151)||(4698668-4698737)
chr4 (87-156)||(20459055-20459124)
chr4 (87-123)||(15794799-15794835)
chr4 (105-153)||(30206525-30206573)
chr4 (82-138)||(45828473-45828529)
[»] chr8 (18 HSPs)
chr8 (91-154)||(30112380-30112443)
chr8 (90-153)||(27976764-27976827)
chr8 (90-153)||(28034033-28034096)
chr8 (87-153)||(27976765-27976831)
chr8 (87-153)||(28034034-28034100)
chr8 (62-151)||(325222-325311)
chr8 (87-156)||(9420626-9420695)
chr8 (54-113)||(41175193-41175252)
chr8 (82-156)||(14547793-14547867)
chr8 (87-152)||(27870980-27871045)
chr8 (92-153)||(27870980-27871041)
chr8 (90-123)||(28872189-28872222)
chr8 (89-153)||(27789320-27789384)
chr8 (91-155)||(43409877-43409941)
chr8 (94-156)||(1364161-1364223)
chr8 (91-153)||(10107319-10107377)
chr8 (87-123)||(289152-289188)
chr8 (87-151)||(10396831-10396895)
[»] chr3 (9 HSPs)
chr3 (65-156)||(45361988-45362079)
chr3 (87-149)||(36750790-36750852)
chr3 (87-156)||(28406506-28406575)
chr3 (87-156)||(32711242-32711311)
chr3 (82-151)||(48593187-48593256)
chr3 (91-153)||(32711245-32711307)
chr3 (65-154)||(45362013-45362101)
chr3 (82-146)||(1755893-1755957)
chr3 (82-122)||(26331248-26331288)
[»] chr7 (11 HSPs)
chr7 (82-156)||(47681557-47681631)
chr7 (91-156)||(47612330-47612395)
chr7 (91-156)||(35436262-35436327)
chr7 (57-154)||(37002870-37002967)
chr7 (89-153)||(7430087-7430151)
chr7 (62-150)||(37489783-37489871)
chr7 (82-153)||(37489812-37489883)
chr7 (102-156)||(28838165-28838219)
chr7 (82-156)||(35436256-35436330)
chr7 (87-156)||(40362009-40362078)
chr7 (54-114)||(26422114-26422173)
[»] chr5 (2 HSPs)
chr5 (82-154)||(12442276-12442348)
chr5 (65-154)||(6761051-6761140)
[»] scaffold0025 (1 HSPs)
scaffold0025 (82-156)||(65984-66058)
[»] chr6 (6 HSPs)
chr6 (91-156)||(20703440-20703505)
chr6 (87-151)||(1158284-1158348)
chr6 (98-150)||(2284822-2284874)
chr6 (87-146)||(29938661-29938720)
chr6 (82-156)||(6686855-6686929)
chr6 (82-155)||(20703434-20703507)
[»] scaffold0032 (1 HSPs)
scaffold0032 (94-156)||(47270-47332)


Alignment Details
Target: chr2 (Bit Score: 150; Significance: 2e-79; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 36452582 - 36452346
Alignment:
Q  1 cttagaaaatatttacatgaatgacagtgtcaatcttagacatgtactacattcggtctcatatatatatgaaaagattagttttctagattcattgaat 100  Q
    |||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  36452582 cttagaaaatatttacatgaatgaaagtgtcacccttagacatgtactacattcggtctcatatatat--gaaaagattagttttctagattcattgaat 36452485  T
Q  101 aattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacctnnnnnnng-aatatttttcttcatagctaattttatatttattt 199  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||       | || |  ||||||||||||||||||||    |||||    
T  36452484 aattgatgtatctgatctatattgttaaccagatacattacttatttaatgaacctaaaaaaagaaaaaaatttcttcatagctaatttta----tattt 36452389  T
Q  200 ctagtgttgtgagatattgaagtatattttgaatgagaataat 242  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  36452388 ctagtgttgtgagatattgaagtatattttgaatgagaataat 36452346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 154
Target Start/End: Original strand, 37153924 - 37153996
Alignment:
Q  82 ttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaac 154  Q
    |||| |||||||||||||||| |||||||| |||| |  ||||| |  ||| |||||||||||||||||||||    
T  37153924 ttttttagattcattgaataaataatgtatatggttttcattgtaagtcaggtacattacttattcaatgaac 37153996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 7833396 - 7833325
Alignment:
Q  82 ttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaa 153  Q
    |||| |||||| ||| |||| |||||||||||| |||||||| | || ||||||||| | ||||||||||||    
T  7833396 ttttttagatttattaaatagttaatgtatctgatctatattttaaatcagatacatcaattattcaatgaa 7833325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 44587673 - 44587744
Alignment:
Q  82 ttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaa 153  Q
    |||| ||| |||||||||||| | |||||| |||||||||||| | |||| |||||| ||| ||||||||||    
T  44587673 ttttttaggttcattgaataaatgatgtatgtggtctatattgatgaccacatacatcactcattcaatgaa 44587744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 25903798 - 25903729
Alignment:
Q  82 ttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatg 151  Q
    |||| ||||| |||| ||||||||||||||||  |||  ||||| ||| |||||||||| ||||||||||    
T  25903798 ttttttagatacatttaataattaatgtatctactcttcattgtaaacgagatacattaattattcaatg 25903729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 45651089 - 45651020
Alignment:
Q  87 tagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    ||||||| |||||||||| |||||||||||||||||| |  | ||||| ||| | ||||||||| |||||    
T  45651089 tagattctttgaataattgatgtatctggtctatattatagaacagattcatcagttattcaataaacct 45651020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 4860275 - 4860326
Alignment:
Q  88 agattcattgaataattaatgtatctggtctatattgttaaccagatacatta 140  Q
    ||||||||||||||| | |||||||||||||||| | | ||||||||||||||    
T  4860275 agattcattgaataactgatgtatctggtctata-tataaaccagatacatta 4860326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 8996862 - 8996794
Alignment:
Q  83 tttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatg 151  Q
    ||||||||| ||||||||||| ||||||| | |||| |||| |  || |||||||||| ||||||||||    
T  8996862 tttctagatacattgaataatcaatgtatatagtctttattatagactagatacattaattattcaatg 8996794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 12486101 - 12486065
Alignment:
Q  87 tagattcattgaataattaatgtatctggtctatatt 123  Q
    |||||||||||||||||| |||||| |||||||||||    
T  12486101 tagattcattgaataattgatgtatttggtctatatt 12486065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 122
Target Start/End: Complemental strand, 41120058 - 41120030
Alignment:
Q  94 attgaataattaatgtatctggtctatat 122  Q
    |||||||||||||||||||||||||||||    
T  41120058 attgaataattaatgtatctggtctatat 41120030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 41464804 - 41464756
Alignment:
Q  106 atgtatctggtctatattgttaaccagatacattacttattcaatgaac 154  Q
    |||||||| |||||||||  |||| |||||||||| |||||||||||||    
T  41464804 atgtatctagtctatatttataacgagatacattaattattcaatgaac 41464756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 101610 - 101516
Alignment:
Q  62 tatatatatgaaaagattagttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    |||||||| |||||||||  |||  ||| |||||||||||||||||||||||||| || ||||| |||||||||||||| |||||||||||||||    
T  101610 tatatatacgaaaagattcttttcgtaggttcattgaataattaatgtatctggtttacattgtaaaccagatacattaattattcaatgaacct 101516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 156
Target Start/End: Original strand, 101492 - 101584
Alignment:
Q  63 atatatatgaaaagattagttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    ||||||| |||||||||  |||| ||| |||||||||||||||||||||||||| || | ||| |||||||||||||| |||||||||||||||    
T  101492 atatataagaaaagattcttttt-taggttcattgaataattaatgtatctggtttacaatgtaaaccagatacattaattattcaatgaacct 101584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 156
Target Start/End: Original strand, 40212293 - 40212386
Alignment:
Q  63 atatatatgaaaagattagttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    ||||||| ||||| |||| |||||||  || |||||||||||||| ||||||||||||||||| ||  | |||||||| |||||||||| ||||    
T  40212293 atatataagaaaatattatttttctaagtttattgaataattaatatatctggtctatattgtaaaaaaaatacattaattattcaatggacct 40212386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 152
Target Start/End: Original strand, 35944074 - 35944154
Alignment:
Q  72 aaaagattagttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatga 152  Q
    ||||||||  |||| ||| ||| |||||||||||||||||||| |||| ||||| || ||||||||||| |||||||||||    
T  35944074 aaaagattcattttttaggttcgttgaataattaatgtatctgatctacattgtaaagcagatacattaattattcaatga 35944154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 22819176 - 22819239
Alignment:
Q  91 ttcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaac 154  Q
    ||||||||||||||||||||| ||||||  ||||| || |||||||||||  ||||||||||||    
T  22819176 ttcattgaataattaatgtatatggtcttcattgtaaatcagatacattaactattcaatgaac 22819239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 39515042 - 39514974
Alignment:
Q  88 agattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    ||||||||| ||||| || |||||||| | |||||| | |||||||||||||| |||||||| ||||||    
T  39515042 agattcattaaataactattgtatctgatatatattataaaccagatacattagttattcaacgaacct 39514974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 50105685 - 50105753
Alignment:
Q  77 attagttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttat 145  Q
    |||| |||| ||||||||||||||||| |||||||||| |||||| | | ||| |||||||||| ||||    
T  50105685 attaattttttagattcattgaataatcaatgtatctgatctataatataaactagatacattaattat 50105753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 897138 - 897091
Alignment:
Q  65 atatatgaaaagattagttttctagattcattgaataattaatgtatc 112  Q
    ||||| |||||||||| |||| ||||| ||||||||||||||||||||    
T  897138 atataagaaaagattatttttttagatacattgaataattaatgtatc 897091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 8174197 - 8174165
Alignment:
Q  90 attcattgaataattaatgtatctggtctatat 122  Q
    ||||||||||| |||||||||||||||||||||    
T  8174197 attcattgaatgattaatgtatctggtctatat 8174165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 155
Target Start/End: Complemental strand, 22819266 - 22819174
Alignment:
Q  63 atatatatgaaaagattagttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacc 155  Q
    ||||||| |||||||||  |||| ||  ||||||||||| |||||||||||| | || | ||   |||| |||||||| ||||||||||||||    
T  22819266 atatataagaaaagattctttttttacgttcattgaatagttaatgtatctgatttacaatgaagaccatatacattaattattcaatgaacc 22819174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 35944154 - 35944090
Alignment:
Q  92 tcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    ||||||||||||||||||||||| | || | |||  | ||||||||||| |||||||| ||||||    
T  35944154 tcattgaataattaatgtatctgctttacaatgtagatcagatacattaattattcaacgaacct 35944090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 155
Target Start/End: Complemental strand, 51590539 - 51590471
Alignment:
Q  87 tagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacc 155  Q
    |||||||||||  ||| | |||||||| |||||||||  |||| |||||||||| |||||| |||||||    
T  51590539 tagattcattgtgtaagtgatgtatctagtctatatttataacaagatacattaattattctatgaacc 51590471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 12766955 - 12766883
Alignment:
Q  82 ttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaac 154  Q
    |||| ||| ||||||||||||||||||||||||||||| ||||| ||  |||||||||| |||||||||||||    
T  12766955 ttttttaggttcattgaataattaatgtatctggtctacattgtaaagtagatacattaattattcaatgaac 12766883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 54357924 - 54357998
Alignment:
Q  82 ttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    |||| ||| |||||||| || ||||||||||||||||| ||||| || ||||||||||| ||||| |||||||||    
T  54357924 ttttttaggttcattgagtagttaatgtatctggtctacattgtaaaacagatacattaattattaaatgaacct 54357998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 6724914 - 6724975
Alignment:
Q  95 ttgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    ||||||||||||||||||||||||| ||||  || |||||| |||| |||||||||||||||    
T  6724914 ttgaataattaatgtatctggtctacattgaaaaacagatatattaattattcaatgaacct 6724975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 153
Target Start/End: Complemental strand, 50533475 - 50533369
Alignment:
Q  45 tactacattcggtctcatatatatatgaaaagattagttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattactta 144  Q
    |||| |||||||||||| |||||   ||||| |||| |||| ||| |||||||| || ||||||||||||||||| ||||| || |||||| |||| |||    
T  50533475 tacttcattcggtctcaaatataa--gaaaatattatttttttaggttcattgagtagttaatgtatctggtctacattgtaaagcagatatattaatta 50533378  T
Q  145 ttcaatgaa 153  Q
    || ||||||    
T  50533377 tttaatgaa 50533369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 10554999 - 10554940
Alignment:
Q  91 ttcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaat 150  Q
    ||||||||||||||||||||||||||||  ||||| ||  |||||||||| |||||||||    
T  10554999 ttcattgaataattaatgtatctggtcttcattgtaaagtagatacattaattattcaat 10554940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 12766884 - 12766949
Alignment:
Q  91 ttcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    |||||||||||||||||||||||  | || | |||  ||||||||||||| |||||||||||||||    
T  12766884 ttcattgaataattaatgtatctactttacaatgtagaccagatacattaattattcaatgaacct 12766949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 20114168 - 20114104
Alignment:
Q  87 tagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatg 151  Q
    |||||| ||||||||| |||||||| ||||||||||| | ||||| |||||| | ||||||||||    
T  20114168 tagattaattgaataactaatgtatatggtctatattctaaaccaaatacataaattattcaatg 20114104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 21861155 - 21861120
Alignment:
Q  87 tagattcattgaataattaatgtatctggtctatat 122  Q
    |||||||||| |||||||||||||||||||||||||    
T  21861155 tagattcattaaataattaatgtatctggtctatat 21861120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 122
Target Start/End: Complemental strand, 21917018 - 21916983
Alignment:
Q  87 tagattcattgaataattaatgtatctggtctatat 122  Q
    |||||||||| |||||||||||||||||||||||||    
T  21917018 tagattcattaaataattaatgtatctggtctatat 21916983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 56491115 - 56491178
Alignment:
Q  91 ttcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaac 154  Q
    ||||||| |||| |||||||||| |||||||||  |||| || ||||||| |||||||||||||    
T  56491115 ttcattgtataagtaatgtatctagtctatatttataacgaggtacattaattattcaatgaac 56491178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 26066478 - 26066412
Alignment:
Q  87 tagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaa 153  Q
    |||||||||| ||||| | |||||||||||||||||| |  ||| ||||||| | ||||||||||||    
T  26066478 tagattcattaaataactgatgtatctggtctatattctagaccggatacatcaattattcaatgaa 26066412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 156
Target Start/End: Complemental strand, 54673400 - 54673350
Alignment:
Q  106 atgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    |||||||| |||||||||  |||| |||| |||||||||||||||||||||    
T  54673400 atgtatctagtctatatttataacgagatgcattacttattcaatgaacct 54673350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 4698737 - 4698668
Alignment:
Q  82 ttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatg 151  Q
    |||| ||||| |||||||||||| |||||| ||||||| | | | |||||||||||| | ||||||||||    
T  4698737 ttttttagatacattgaataatttatgtatatggtctagaatctaaaccagatacataaattattcaatg 4698668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 20459124 - 20459055
Alignment:
Q  87 tagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    |||||||||||| || ||||||||||||||||| ||| | || || ||| |||| ||||| |||||||||    
T  20459124 tagattcattgagtagttaatgtatctggtctacattttaaaacatatatattaattatttaatgaacct 20459055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 15794799 - 15794835
Alignment:
Q  87 tagattcattgaataattaatgtatctggtctatatt 123  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  15794799 tagatacattgaataattaatgtatctggtctttatt 15794835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 30206525 - 30206573
Alignment:
Q  105 aatgtatctggtctatattgttaaccagatacattacttattcaatgaa 153  Q
    ||||||| ||||||||||| | |||||||||||| | ||||||||||||    
T  30206525 aatgtatttggtctatattataaaccagatacatcaattattcaatgaa 30206573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 45828529 - 45828473
Alignment:
Q  82 ttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacat 138  Q
    |||| |||||||||||| |||||||||||| ||||||||| | | ||||| ||||||    
T  45828529 ttttttagattcattgagtaattaatgtatttggtctataatataaaccaaatacat 45828473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 30112380 - 30112443
Alignment:
Q  91 ttcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaac 154  Q
    ||||||||||||||||||||| ||||||| ||||||||  |||||||||| |||||||||||||    
T  30112380 ttcattgaataattaatgtatttggtctacattgttaaatagatacattaattattcaatgaac 30112443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 27976764 - 27976827
Alignment:
Q  90 attcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaa 153  Q
    ||||||| ||||||||||| |||||||||||| |||  ||||||||||||| ||||||||||||    
T  27976764 attcattaaataattaatgcatctggtctataatgtagaccagatacattaattattcaatgaa 27976827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 28034033 - 28034096
Alignment:
Q  90 attcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaa 153  Q
    ||||||| ||||||||||| |||||||||||| |||  ||||||||||||| ||||||||||||    
T  28034033 attcattaaataattaatgcatctggtctataatgtagaccagatacattaattattcaatgaa 28034096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 27976831 - 27976765
Alignment:
Q  87 tagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaa 153  Q
    ||||||||||||||||||||||||||||||||| ||| |  ||||||| ||||| ||||| ||||||    
T  27976831 tagattcattgaataattaatgtatctggtctacattatagaccagatgcattaattatttaatgaa 27976765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 28034100 - 28034034
Alignment:
Q  87 tagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaa 153  Q
    ||||||||||||||||||||||||||||||||| ||| |  ||||||| ||||| ||||| ||||||    
T  28034100 tagattcattgaataattaatgtatctggtctacattatagaccagatgcattaattatttaatgaa 28034034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 325222 - 325311
Alignment:
Q  62 tatatatatgaaaagattagttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatg 151  Q
    |||||||| ||||| |||  |||| ||||| |||| |||||||||||||||| ||||  ||||| ||| |||||||||| ||||||||||    
T  325222 tatatataagaaaatattctttttttagatacatttaataattaatgtatctagtcttcattgtaaacgagatacattaattattcaatg 325311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 9420626 - 9420695
Alignment:
Q  87 tagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    ||||||||||| |||| ||||||||||||||||||||  |||| || ||||||| |||||||| ||||||    
T  9420626 tagattcattgtataagtaatgtatctggtctatatttataacgaggtacattaattattcaaagaacct 9420695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 41175193 - 41175252
Alignment:
Q  54 cggtctcatatatatatgaaaagattagttttctagattcattgaataattaatgtatct 113  Q
    |||||||||||||||| |||||| ||  |||| |||||||||||||||||||| ||||||    
T  41175193 cggtctcatatatataagaaaagtttccttttttagattcattgaataattaacgtatct 41175252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 14547793 - 14547867
Alignment:
Q  82 ttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    |||| ||| |||||||| || ||||| ||||||||||| ||||| || ||||||||||| ||||| |||||||||    
T  14547793 ttttttaggttcattgagtagttaatctatctggtctacattgtaaagcagatacattaattatttaatgaacct 14547867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 27871045 - 27870980
Alignment:
Q  87 tagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatga 152  Q
    ||||||||||||||||||||||||||||||||| ||| |  ||||||| | ||| ||||| |||||    
T  27871045 tagattcattgaataattaatgtatctggtctacattatagaccagatgctttaattatttaatga 27870980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 153
Target Start/End: Original strand, 27870980 - 27871041
Alignment:
Q  92 tcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaa 153  Q
    ||||| ||||||||| | |||||||||||| |||  ||||||||||||| ||||||||||||    
T  27870980 tcattaaataattaaagcatctggtctataatgtagaccagatacattaattattcaatgaa 27871041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 123
Target Start/End: Complemental strand, 28872222 - 28872189
Alignment:
Q  90 attcattgaataattaatgtatctggtctatatt 123  Q
    ||||||||||||||||||||||||||||||||||    
T  28872222 attcattgaataattaatgtatctggtctatatt 28872189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 27789320 - 27789384
Alignment:
Q  89 gattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaa 153  Q
    |||||||||||||||| ||||||||||| |||| | || |||| |||||| | ||||||||||||    
T  27789320 gattcattgaataattgatgtatctggtatataatattgaccaaatacatcagttattcaatgaa 27789384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 43409877 - 43409941
Alignment:
Q  91 ttcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacc 155  Q
    ||||||| |||| |||||||||| |||||||||  |||| || ||||||| ||||||||||||||    
T  43409877 ttcattgtataagtaatgtatctagtctatatttataacgaggtacattaattattcaatgaacc 43409941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 1364161 - 1364223
Alignment:
Q  94 attgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    |||||||||||||||||| ||| ||| | ||| ||| | |||||||| |||||||||||||||    
T  1364161 attgaataattaatgtatttggactacaatgtaaactaaatacattatttattcaatgaacct 1364223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 153
Target Start/End: Complemental strand, 10107377 - 10107319
Alignment:
Q  91 ttcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaa 153  Q
    |||||||||||| | ||||||||||||||||||    |||| |||||||| ||||||||||||    
T  10107377 ttcattgaataactgatgtatctggtctatatt----accatatacattaattattcaatgaa 10107319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 289152 - 289188
Alignment:
Q  87 tagattcattgaataattaatgtatctggtctatatt 123  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  289152 tagattcattgaatatttaatgtatttggtctatatt 289188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 10396831 - 10396895
Alignment:
Q  87 tagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatg 151  Q
    |||||| ||||||||| |||||||| ||||||||||| | ||||| |||||| | || |||||||    
T  10396831 tagattaattgaataactaatgtatatggtctatattctaaaccaaatacataaattgttcaatg 10396895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 156
Target Start/End: Original strand, 45361988 - 45362079
Alignment:
Q  65 atatatgaaaagattagttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    ||||| |||||||||  |||| ||  |||||||| |||||||||||||||||||| ||||| || ||||||||||| ||||||||| |||||    
T  45361988 atataagaaaagattcattttttaagttcattgagtaattaatgtatctggtctacattgtaaagcagatacattaattattcaattaacct 45362079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 36750852 - 36750790
Alignment:
Q  87 tagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaa 149  Q
    |||||||||||| || |||||||||||| |||| ||||| || ||||||||||| ||||||||    
T  36750852 tagattcattgagtagttaatgtatctgatctacattgtaaagcagatacattaattattcaa 36750790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 28406506 - 28406575
Alignment:
Q  87 tagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    ||||||| ||||||||||||||||| ||||||||||| |  ||| | ||||| | |||||||||||||||    
T  28406506 tagattcgttgaataattaatgtatttggtctatattctagaccgggtacataaattattcaatgaacct 28406575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 32711311 - 32711242
Alignment:
Q  87 tagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    |||||||||||||||||| |||||||||||||||| | |   ||| |||||| | |||||||||||||||    
T  32711311 tagattcattgaataattgatgtatctggtctataatataggccaaatacatcaattattcaatgaacct 32711242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 48593256 - 48593187
Alignment:
Q  82 ttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatg 151  Q
    |||| |||||||||||||||||| |||||| ||||||||||| |  ||| ||||||| | ||||||||||    
T  48593256 ttttttagattcattgaataatttatgtatttggtctatattctagacccgatacatcaattattcaatg 48593187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 32711245 - 32711307
Alignment:
Q  91 ttcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaa 153  Q
    |||||||||||||| |||||| ||| ||||||| |  ||||||||||| | ||||||||||||    
T  32711245 ttcattgaataattgatgtatttggcctatattatagaccagatacatcaattattcaatgaa 32711307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 45362101 - 45362013
Alignment:
Q  65 atatatgaaaagattagttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaac 154  Q
    ||||| |||||||||  |||| ||| || ||||||||||||||||||||| | || | |||  ||||||||||||| ||| |||||||||    
T  45362101 atataagaaaagattcttttt-taggttaattgaataattaatgtatctgctttacaatgtagaccagatacattaattactcaatgaac 45362013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 1755893 - 1755957
Alignment:
Q  82 ttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttatt 146  Q
    ||||||||||||||| |||||||||||||| ||||| ||| |    ||||||||||||| |||||    
T  1755893 ttttctagattcattcaataattaatgtatttggtccataatacagaccagatacattagttatt 1755957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 26331248 - 26331288
Alignment:
Q  82 ttttctagattcattgaataattaatgtatctggtctatat 122  Q
    |||||||| |||||||||| | |||||||||||||||||||    
T  26331248 ttttctaggttcattgaatgactaatgtatctggtctatat 26331288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 47681631 - 47681557
Alignment:
Q  82 ttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    |||| |||||||||||| || ||||||||||||||| ||||||| || ||||||||||| ||||| ||| |||||    
T  47681631 ttttttagattcattgagtagttaatgtatctggtcgatattgtaaagcagatacattaattatttaataaacct 47681557  T

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Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 47612395 - 47612330
Alignment:
Q  91 ttcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    ||||||| |||| |||||||||| |||||||||  |||| |||||||||| |||||||||||||||    
T  47612395 ttcattgtataagtaatgtatctagtctatatttataacgagatacattaattattcaatgaacct 47612330  T

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Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 35436327 - 35436262
Alignment:
Q  91 ttcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    |||||||||||||| |||||||| || |||| | || ||||||||||| | |||||||||||||||    
T  35436327 ttcattgaataattgatgtatctagtatataatattgaccagatacataagttattcaatgaacct 35436262  T

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Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 154
Target Start/End: Original strand, 37002870 - 37002967
Alignment:
Q  57 tctcatatatatatgaaaagattagttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaac 154  Q
    ||||||||||||| ||||| |||  |||| ||| ||||||||||||||||| ||| | ||||| ||||| ||  | |||||||| ||||| |||||||    
T  37002870 tctcatatatataagaaaatattctttttataggttcattgaataattaatatattttgtctacattgtaaaataaatacattatttatttaatgaac 37002967  T

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Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 7430151 - 7430087
Alignment:
Q  89 gattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaa 153  Q
    |||||||| ||||| | |||||||||||||||||||| ||||| |||||| | ||||||| ||||    
T  7430151 gattcattaaataactgatgtatctggtctatattgtaaaccaaatacataaattattcactgaa 7430087  T

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Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 37489783 - 37489871
Alignment:
Q  62 tatatatatgaaaagattagttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaat 150  Q
    |||||||| ||||| |||| |||  || |||||||||||||||||| ||||| ||  | ||||| || ||||||||||| |||||||||    
T  37489783 tatatataagaaaatattattttcttaaattcattgaataattaatatatctagttcacattgtaaaacagatacattaattattcaat 37489871  T

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Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 37489883 - 37489812
Alignment:
Q  82 ttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaa 153  Q
    |||| |||||| ||||||||||||||||||||| | || | ||| ||| ||||| |||| ||||||||||||    
T  37489883 ttttttagattgattgaataattaatgtatctgttttacaatgtgaactagatatattaattattcaatgaa 37489812  T

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Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 28838165 - 28838219
Alignment:
Q  102 attaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    |||||||||||||||||  ||||| ||| |||||||||| |||||||||| ||||    
T  28838165 attaatgtatctggtcttcattgtaaacgagatacattaattattcaatgtacct 28838219  T

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Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 35436256 - 35436330
Alignment:
Q  82 ttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    |||| ||| |||||||||||| | |||||||||||| ||||| |  || |||||||| | |||||||||||||||    
T  35436256 ttttttaggttcattgaataacttatgtatctggtcaatattatatactagatacatcaattattcaatgaacct 35436330  T

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Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 40362009 - 40362078
Alignment:
Q  87 tagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    |||||||||||||||||| |||||| || | ||||||||  |||| |||||||| | ||||||| |||||    
T  40362009 tagattcattgaataattgatgtatttgatttatattgtagaccaaatacattaatcattcaataaacct 40362078  T

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Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 26422173 - 26422114
Alignment:
Q  54 cggtctcatatatatatgaaaagattagttttctagattcattgaataattaatgtatctg 114  Q
    |||||||||||||||| | |||||||  |||| ||| || |||||||||||||||||||||    
T  26422173 cggtctcatatatataaggaaagattcttttt-taggttaattgaataattaatgtatctg 26422114  T

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Target: chr5 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 12442348 - 12442276
Alignment:
Q  82 ttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaac 154  Q
    |||| ||| |||||||| || ||||||||||||||||| ||||| || ||||||||||| ||||| |||||||    
T  12442348 ttttttaggttcattgagtagttaatgtatctggtctacattgtaaaacagatacattaattatttaatgaac 12442276  T

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Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 6761051 - 6761140
Alignment:
Q  65 atatatgaaaagattagttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaac 154  Q
    ||||| || |||| || |||| ||| ||||||||||||||||| ||| ||| ||| | ||| ||| | |||||||| |||||||||||||    
T  6761051 atataagagaagaatatttttttaggttcattgaataattaatatatttggactacaatgtaaactaaatacattatttattcaatgaac 6761140  T

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Target: scaffold0025 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 65984 - 66058
Alignment:
Q  82 ttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    |||| ||||||||||||| |||| |||||||| ||||||||| | ||||  |||||| | |||||||||||||||    
T  65984 ttttttagattcattgaaaaattcatgtatctagtctatattttaaaccgaatacataaattattcaatgaacct 66058  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 20703505 - 20703440
Alignment:
Q  91 ttcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    ||||||||||| ||||||||| ||||||||||| |  |||| ||||||||  ||||||||||||||    
T  20703505 ttcattgaatatttaatgtatttggtctatattatagaccaaatacattaaatattcaatgaacct 20703440  T

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Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 1158284 - 1158348
Alignment:
Q  87 tagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatg 151  Q
    |||||||||||||||||||||||||  |||||||||| |  |||| |||||| | ||||||||||    
T  1158284 tagattcattgaataattaatgtattcggtctatattctagaccaaatacatcaattattcaatg 1158348  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 2284874 - 2284822
Alignment:
Q  98 aataattaatgtatctggtctatattgttaaccagatacattacttattcaat 150  Q
    ||||||||||||||||| |||||||| | || ||||||||||| |||||||||    
T  2284874 aataattaatgtatctgatctatattataaatcagatacattaattattcaat 2284822  T

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Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 29938720 - 29938661
Alignment:
Q  87 tagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttatt 146  Q
    ||||| ||||||||||||||||||||| |||| ||||||  || |||||||||| |||||    
T  29938720 tagatacattgaataattaatgtatctagtctttattgtatactagatacattaattatt 29938661  T

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Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 6686929 - 6686855
Alignment:
Q  82 ttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    |||| ||| ||||||||||||||||||||| ||| ||| | ||| ||| | |||||| | |||||||||||||||    
T  6686929 ttttttaggttcattgaataattaatgtatttggactacaatgtaaactaaatacatcatttattcaatgaacct 6686855  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 155
Target Start/End: Original strand, 20703434 - 20703507
Alignment:
Q  82 ttttctagattcattgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacc 155  Q
    |||| ||| ||||||||||| ||||||||| ||||||||| | |  |||| ||||||||  |||||||||||||    
T  20703434 ttttttaggttcattgaatatttaatgtatttggtctataatatagaccaaatacattaaatattcaatgaacc 20703507  T

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Target: scaffold0032 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 47332 - 47270
Alignment:
Q  94 attgaataattaatgtatctggtctatattgttaaccagatacattacttattcaatgaacct 156  Q
    |||||||||||||||||| ||||||| ||| | || |||| | |||| |||||||||||||||    
T  47332 attgaataattaatgtatttggtctacattttaaaacagaaatattaattattcaatgaacct 47270  T

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