View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18035_high_13 (Length: 373)

Name: NF18035_high_13
Description: NF18035
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18035_high_13
NF18035_high_13
[»] chr1 (47 HSPs)
chr1 (9-358)||(35593235-35593602)
chr1 (9-52)||(21056211-21056254)
chr1 (9-52)||(28572817-28572860)
chr1 (9-56)||(38895745-38895792)
chr1 (9-52)||(47137528-47137571)
chr1 (9-52)||(1375653-1375696)
chr1 (9-52)||(1827371-1827414)
chr1 (9-52)||(1828109-1828152)
chr1 (9-52)||(5427253-5427296)
chr1 (9-52)||(19321382-19321425)
chr1 (62-137)||(22198226-22198301)
chr1 (9-52)||(28571326-28571369)
chr1 (62-137)||(33074977-33075052)
chr1 (9-52)||(38896485-38896528)
chr1 (9-52)||(46623705-46623748)
chr1 (9-52)||(50562325-50562368)
chr1 (56-96)||(8256530-8256570)
chr1 (62-138)||(16301279-16301355)
chr1 (61-96)||(1827440-1827475)
chr1 (9-52)||(4892361-4892404)
chr1 (9-52)||(5427985-5428028)
chr1 (9-52)||(16301209-16301252)
chr1 (9-52)||(28950633-28950676)
chr1 (9-52)||(29186083-29186126)
chr1 (9-52)||(33074559-33074602)
chr1 (9-52)||(33075079-33075122)
chr1 (9-52)||(33361964-33362007)
chr1 (9-52)||(33373622-33373665)
chr1 (9-52)||(46624435-46624478)
chr1 (9-52)||(50563142-50563185)
chr1 (9-52)||(51964791-51964834)
chr1 (9-52)||(52311111-52311154)
chr1 (9-52)||(52311893-52311936)
chr1 (14-52)||(4893643-4893681)
chr1 (14-52)||(19320749-19320787)
chr1 (9-43)||(20130618-20130652)
chr1 (62-108)||(28571396-28571442)
chr1 (62-96)||(28572139-28572173)
chr1 (14-52)||(29184806-29184844)
chr1 (14-52)||(33363247-33363285)
chr1 (56-93)||(35598308-35598345)
chr1 (56-93)||(35599401-35599438)
chr1 (62-138)||(19321279-19321355)
chr1 (12-52)||(28572072-28572112)
chr1 (12-52)||(33375366-33375406)
chr1 (62-138)||(50562395-50562471)
chr1 (70-138)||(52311183-52311251)
[»] chr4 (56 HSPs)
chr4 (9-56)||(42348323-42348370)
chr4 (9-138)||(26603397-26603537)
chr4 (9-52)||(8988872-8988915)
chr4 (9-52)||(37351772-37351815)
chr4 (9-52)||(37356671-37356714)
chr4 (9-52)||(43023689-43023732)
chr4 (9-56)||(42348603-42348652)
chr4 (9-49)||(50043008-50043048)
chr4 (9-52)||(3758305-3758348)
chr4 (9-52)||(3758950-3758993)
chr4 (9-52)||(5755268-5755311)
chr4 (9-52)||(8531883-8531926)
chr4 (9-52)||(8987492-8987535)
chr4 (9-52)||(9888355-9888398)
chr4 (9-52)||(13172619-13172662)
chr4 (9-52)||(17741333-17741376)
chr4 (9-52)||(20589989-20590032)
chr4 (9-52)||(20590673-20590716)
chr4 (9-52)||(24548340-24548383)
chr4 (9-52)||(26602642-26602685)
chr4 (9-52)||(29713496-29713539)
chr4 (9-52)||(37350392-37350435)
chr4 (9-52)||(39405663-39405706)
chr4 (9-52)||(47555753-47555796)
chr4 (9-52)||(47556385-47556428)
chr4 (9-44)||(49355408-49355443)
chr4 (9-52)||(50118396-50118439)
chr4 (9-52)||(50119034-50119077)
chr4 (9-56)||(54866886-54866933)
chr4 (14-52)||(8964510-8964548)
chr4 (9-42)||(39404943-39404976)
chr4 (61-138)||(46105261-46105338)
chr4 (11-52)||(46419704-46419745)
chr4 (62-138)||(20590059-20590135)
chr4 (62-138)||(24944893-24944969)
chr4 (9-49)||(46105192-46105232)
chr4 (9-52)||(12680963-12681006)
chr4 (9-52)||(24549093-24549136)
chr4 (9-40)||(36742140-36742171)
chr4 (9-52)||(37061660-37061703)
chr4 (9-52)||(39713824-39713867)
chr4 (9-52)||(52801285-52801328)
chr4 (62-108)||(8987562-8987608)
chr4 (62-96)||(8988194-8988228)
chr4 (62-108)||(37350462-37350508)
chr4 (62-96)||(37351094-37351128)
chr4 (9-39)||(46106092-46106122)
chr4 (14-52)||(52802609-52802647)
chr4 (9-50)||(24944478-24944519)
chr4 (63-108)||(48808426-48808471)
chr4 (62-138)||(2117187-2117263)
chr4 (12-52)||(8988127-8988167)
chr4 (12-52)||(9887612-9887652)
chr4 (62-138)||(24947609-24947685)
chr4 (12-52)||(37351027-37351067)
chr4 (12-52)||(43022956-43022996)
[»] chr3 (33 HSPs)
chr3 (9-93)||(9373953-9374048)
chr3 (9-96)||(36006479-36006577)
chr3 (9-52)||(8527142-8527185)
chr3 (9-52)||(52842856-52842899)
chr3 (9-93)||(9373449-9373544)
chr3 (11-52)||(19893507-19893548)
chr3 (9-46)||(46489283-46489320)
chr3 (9-93)||(51656460-51656555)
chr3 (9-52)||(8396435-8396478)
chr3 (57-123)||(9373182-9373246)
chr3 (9-52)||(19361688-19361731)
chr3 (9-52)||(19367768-19367811)
chr3 (9-52)||(22521923-22521966)
chr3 (9-52)||(29529827-29529870)
chr3 (9-52)||(35855820-35855863)
chr3 (9-52)||(40822058-40822101)
chr3 (9-52)||(48519984-48520027)
chr3 (9-52)||(55290723-55290766)
chr3 (9-93)||(53521729-53521824)
chr3 (62-138)||(35855890-35855966)
chr3 (9-49)||(39093595-39093635)
chr3 (62-138)||(40821955-40822031)
chr3 (9-52)||(19368408-19368451)
chr3 (9-52)||(26101732-26101775)
chr3 (9-52)||(26776764-26776807)
chr3 (9-52)||(29529080-29529123)
chr3 (9-52)||(39094221-39094264)
chr3 (9-52)||(53801512-53801555)
chr3 (62-138)||(55293634-55293710)
chr3 (14-52)||(4138694-4138732)
chr3 (62-140)||(29529722-29529800)
chr3 (56-93)||(9374138-9374175)
chr3 (62-138)||(53801582-53801658)
[»] scaffold0115 (3 HSPs)
scaffold0115 (9-52)||(14682-14725)
scaffold0115 (11-52)||(3683-3724)
scaffold0115 (11-52)||(11423-11464)
[»] chr8 (53 HSPs)
chr8 (9-52)||(8160745-8160788)
chr8 (9-52)||(8762684-8762727)
chr8 (9-52)||(25834325-25834368)
chr8 (9-52)||(32846880-32846923)
chr8 (9-56)||(34894080-34894127)
chr8 (9-56)||(40586766-40586813)
chr8 (9-49)||(41532100-41532140)
chr8 (9-52)||(1943369-1943412)
chr8 (9-52)||(8162217-8162260)
chr8 (9-52)||(8761304-8761347)
chr8 (9-52)||(9473793-9473836)
chr8 (9-52)||(12761160-12761203)
chr8 (9-52)||(24055510-24055553)
chr8 (9-52)||(25346612-25346655)
chr8 (9-52)||(25361185-25361228)
chr8 (9-52)||(25835705-25835748)
chr8 (9-52)||(32844754-32844797)
chr8 (9-44)||(34894267-34894302)
chr8 (9-52)||(36777511-36777554)
chr8 (9-52)||(41157581-41157624)
chr8 (9-52)||(41158317-41158360)
chr8 (9-52)||(44381041-44381084)
chr8 (9-52)||(44381742-44381785)
chr8 (9-42)||(1944859-1944892)
chr8 (9-42)||(44428549-44428582)
chr8 (62-138)||(7390310-7390386)
chr8 (9-52)||(4465427-4465470)
chr8 (9-52)||(7390240-7390283)
chr8 (9-52)||(7390988-7391031)
chr8 (9-52)||(9473155-9473198)
chr8 (9-52)||(25618828-25618871)
chr8 (9-52)||(32846132-32846175)
chr8 (9-52)||(36778150-36778193)
chr8 (9-52)||(41978515-41978558)
chr8 (62-138)||(41978585-41978661)
chr8 (9-52)||(42244664-42244707)
chr8 (62-108)||(1943439-1943485)
chr8 (62-96)||(8161413-8161447)
chr8 (62-108)||(8162144-8162190)
chr8 (62-108)||(8761374-8761420)
chr8 (62-96)||(8762006-8762040)
chr8 (14-52)||(25619736-25619774)
chr8 (62-96)||(25835012-25835046)
chr8 (62-108)||(25835632-25835678)
chr8 (62-96)||(32845569-32845603)
chr8 (62-108)||(32846202-32846248)
chr8 (56-93)||(38295353-38295390)
chr8 (62-138)||(4465324-4465400)
chr8 (12-52)||(8161474-8161514)
chr8 (12-52)||(8761939-8761979)
chr8 (12-52)||(25835073-25835113)
chr8 (12-52)||(32845502-32845542)
chr8 (62-138)||(41532686-41532762)
[»] chr7 (34 HSPs)
chr7 (9-52)||(9151089-9151132)
chr7 (9-52)||(690958-691001)
chr7 (9-52)||(4849374-4849417)
chr7 (9-52)||(7855292-7855335)
chr7 (9-52)||(7856047-7856090)
chr7 (9-52)||(11835303-11835346)
chr7 (9-52)||(21669560-21669603)
chr7 (9-52)||(27733282-27733325)
chr7 (62-137)||(29468439-29468514)
chr7 (9-52)||(29468889-29468932)
chr7 (9-52)||(34872748-34872791)
chr7 (9-52)||(34873490-34873533)
chr7 (9-52)||(35155817-35155860)
chr7 (9-52)||(39277920-39277963)
chr7 (9-52)||(44806248-44806291)
chr7 (9-52)||(49145238-49145281)
chr7 (62-123)||(9150637-9150696)
chr7 (9-42)||(24682629-24682662)
chr7 (61-96)||(4849443-4849478)
chr7 (9-52)||(9150567-9150610)
chr7 (9-52)||(17171287-17171330)
chr7 (9-52)||(24684096-24684139)
chr7 (9-52)||(31897142-31897185)
chr7 (9-52)||(34989411-34989454)
chr7 (9-52)||(35156455-35156498)
chr7 (9-52)||(39648930-39648973)
chr7 (9-52)||(44805500-44805543)
chr7 (14-52)||(17172569-17172607)
chr7 (62-108)||(24684023-24684069)
chr7 (62-140)||(35156350-35156428)
chr7 (62-140)||(44805570-44805648)
chr7 (14-52)||(48527740-48527778)
chr7 (61-138)||(49145004-49145081)
chr7 (9-49)||(29468369-29468409)
[»] chr6 (23 HSPs)
chr6 (9-52)||(9979037-9979080)
chr6 (9-52)||(21055513-21055556)
chr6 (9-52)||(21059285-21059328)
chr6 (9-96)||(4621406-4621504)
chr6 (62-138)||(14832778-14832854)
chr6 (9-49)||(35159791-35159831)
chr6 (9-52)||(4108980-4109023)
chr6 (62-137)||(4896816-4896891)
chr6 (9-52)||(6966566-6966609)
chr6 (9-52)||(9736025-9736068)
chr6 (9-52)||(14832708-14832751)
chr6 (9-52)||(15044156-15044199)
chr6 (9-52)||(35159113-35159156)
chr6 (61-138)||(4109049-4109126)
chr6 (9-49)||(33319884-33319924)
chr6 (9-52)||(1220781-1220824)
chr6 (9-44)||(4896297-4896332)
chr6 (9-52)||(4896918-4896961)
chr6 (9-52)||(21078526-21078569)
chr6 (9-52)||(24446188-24446231)
chr6 (9-52)||(33320508-33320551)
chr6 (9-39)||(4109726-4109756)
chr6 (14-52)||(24447470-24447508)
[»] chr5 (37 HSPs)
chr5 (9-52)||(752397-752440)
chr5 (9-52)||(2182509-2182552)
chr5 (9-56)||(27440905-27440952)
chr5 (9-52)||(33705084-33705127)
chr5 (9-52)||(43136602-43136645)
chr5 (9-93)||(3086692-3086787)
chr5 (9-93)||(38937343-38937438)
chr5 (9-52)||(753888-753931)
chr5 (9-52)||(6304882-6304925)
chr5 (9-52)||(12419521-12419564)
chr5 (9-52)||(17637769-17637812)
chr5 (9-52)||(26601626-26601669)
chr5 (9-52)||(30755410-30755453)
chr5 (9-52)||(33705717-33705760)
chr5 (9-52)||(36885109-36885152)
chr5 (9-52)||(42975718-42975761)
chr5 (9-52)||(42976349-42976392)
chr5 (9-52)||(42976985-42977028)
chr5 (9-52)||(43137982-43138025)
chr5 (11-52)||(17637014-17637055)
chr5 (9-52)||(2181770-2181813)
chr5 (62-140)||(17637665-17637742)
chr5 (9-52)||(25695866-25695909)
chr5 (9-52)||(30180350-30180393)
chr5 (9-56)||(39915362-39915409)
chr5 (9-52)||(41691535-41691578)
chr5 (62-96)||(753084-753118)
chr5 (62-108)||(753815-753861)
chr5 (14-52)||(34719133-34719171)
chr5 (14-52)||(41692817-41692855)
chr5 (62-96)||(43137289-43137323)
chr5 (62-108)||(43137909-43137955)
chr5 (12-52)||(753145-753185)
chr5 (62-138)||(6304779-6304855)
chr5 (62-138)||(26601523-26601599)
chr5 (9-41)||(36886005-36886037)
chr5 (12-52)||(43137350-43137390)
[»] chr2 (26 HSPs)
chr2 (9-52)||(1513188-1513231)
chr2 (9-52)||(6931577-6931620)
chr2 (9-56)||(15783430-15783477)
chr2 (9-52)||(6931055-6931098)
chr2 (9-52)||(10875470-10875513)
chr2 (9-52)||(17838145-17838188)
chr2 (9-52)||(18091676-18091719)
chr2 (9-52)||(19487947-19487990)
chr2 (9-52)||(32676085-32676128)
chr2 (9-52)||(42781597-42781640)
chr2 (9-52)||(42782344-42782387)
chr2 (9-49)||(25235258-25235298)
chr2 (62-138)||(28608941-28609017)
chr2 (62-138)||(28609672-28609748)
chr2 (9-52)||(1513835-1513878)
chr2 (9-52)||(4290631-4290674)
chr2 (9-40)||(10874739-10874770)
chr2 (9-52)||(19485263-19485306)
chr2 (9-52)||(25235412-25235455)
chr2 (9-52)||(28608871-28608914)
chr2 (9-52)||(28609602-28609645)
chr2 (9-52)||(32676609-32676652)
chr2 (14-52)||(4289356-4289394)
chr2 (62-96)||(32676548-32676582)
chr2 (62-138)||(1513732-1513808)
chr2 (9-49)||(19487191-19487231)
[»] scaffold0032 (2 HSPs)
scaffold0032 (61-138)||(3808-3885)
scaffold0032 (9-52)||(10360-10403)
[»] scaffold0484 (2 HSPs)
scaffold0484 (9-52)||(8504-8547)
scaffold0484 (9-52)||(9136-9179)
[»] scaffold0381 (2 HSPs)
scaffold0381 (9-52)||(10146-10189)
scaffold0381 (12-52)||(10892-10932)
[»] scaffold0079 (2 HSPs)
scaffold0079 (9-52)||(8919-8962)
scaffold0079 (9-52)||(9670-9713)
[»] scaffold0009 (4 HSPs)
scaffold0009 (9-52)||(139259-139302)
scaffold0009 (9-52)||(232234-232277)
scaffold0009 (9-52)||(232867-232910)
scaffold0009 (62-96)||(232304-232338)
[»] scaffold0057 (2 HSPs)
scaffold0057 (9-52)||(18363-18406)
scaffold0057 (14-51)||(17731-17768)
[»] scaffold0051 (1 HSPs)
scaffold0051 (9-39)||(55229-55259)


Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 9 - 358
Target Start/End: Complemental strand, 35593602 - 35593235
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgttcat-----------taacaattaacattttgattaaattaaacggggttaattaac 97  Q
    ||||| ||||||||||||||||| ||||||||||||||||| || ||           |||||||||| ||||||||||||||| |  |||||||||||     
T  35593602 atttgcttagtaaaattaaggag-aaaattaggagctatttatttattttaatttccataacaattaatattttgattaaattagatagggttaattaaa 35593504  T
Q  98 tatggctaatatatagtaaaattaagg-aaaagttaggttaa-tttaaaaaataagagatatcaattttatcct--tgaacttagctcaattgtcatgaa 193  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||  ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  35593503 tatggctaatatatagtaaaattaaggaaaaagttaggttaactttaaggaataagagatatcaattttatccttatgaacttagctcaattgtcatgaa 35593404  T
Q  194 ca----atggtataagccgcgaggattgtgaaagaaaattctagagttaacaaaatctcccaacgaaatcaaaaccccaaacaaacctaaaccaaacgcg 289  Q
    ||    || || ||| ||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35593403 caatccatagtgtaaccctggaggattgtgaaagaaaattctggagttaacaaaatctcccaacgaaatcaaaaccccaaacaaacctaaaccaaacgcg 35593304  T
Q  290 attttagattttccccaattcgatcaatcaaacattgcagaaccatcgattcacgattcgttgcaattg 358  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35593303 attttagattttccccaattcgatcaatcaaacattgcagaaccatcgattcacgattcgttgcaattg 35593235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 21056254 - 21056211
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  21056254 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 21056211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 28572817 - 28572860
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  28572817 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 28572860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 38895745 - 38895792
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgttcatt 56  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||    
T  38895745 atttgtttagtaaaattaaggagaaaaattagaagcgatttgttcatt 38895792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 47137528 - 47137571
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  47137528 atttttttagtaaaattaaggagaaaaattaggagctatttgtt 47137571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 1375653 - 1375696
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||| |||||||||||||||||||||||||| |||||||    
T  1375653 atttgtttaataaaattaaggagaaaaattaggagcgatttgtt 1375696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 1827371 - 1827414
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  1827371 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 1827414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 1828109 - 1828152
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||| ||||||||||||| |||||||    
T  1828109 atttgtttagtaaaattaaggataaaaattaggagcgatttgtt 1828152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 5427253 - 5427296
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  5427253 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 5427296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 19321425 - 19321382
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  19321425 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 19321382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 22198301 - 22198226
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggtta 137  Q
    ||||||||||||||||||||||| ||||||||||| || || ||  |||||||||||||||| ||  |||||||||||    
T  22198301 ttaacattttgattaaattaaacagggttaattaaatagggtta--atatagtaaaattaagcaaagaagttaggtta 22198226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 28571326 - 28571369
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  28571326 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 28571369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 33075052 - 33074977
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggtta 137  Q
    ||||||||||||||||||||||| ||||||||||| || || ||  |||||||||||||||| ||  |||||||||||    
T  33075052 ttaacattttgattaaattaaacagggttaattaaatagggtta--atatagtaaaattaagcaaagaagttaggtta 33074977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 38896485 - 38896528
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  38896485 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 38896528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 46623748 - 46623705
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  46623748 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 46623705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 50562325 - 50562368
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  50562325 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 50562368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 8256570 - 8256530
Alignment:
Q  56 taacaattaacattttgattaaattaaacggggttaattaa 96  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  8256570 taacaattaacattttgattaaattaaatagggttaattaa 8256530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 16301279 - 16301355
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    ||||||||||||||||||||||| ||||||||||| || || ||  ||| |||||||||||| ||  ||||||||||||    
T  16301279 ttaacattttgattaaattaaacagggttaattaaatagggtta--atacagtaaaattaagcaaataagttaggttaa 16301355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 1827440 - 1827475
Alignment:
Q  61 attaacattttgattaaattaaacggggttaattaa 96  Q
    |||||||||||||||||||||||| |||||||||||    
T  1827440 attaacattttgattaaattaaacagggttaattaa 1827475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 4892361 - 4892404
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||| |||| |||||||||||||||| |||||||    
T  4892361 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtt 4892404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 5427985 - 5428028
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||||||||||||||| | || |||||||    
T  5427985 atttgtttagtaaaattaaggagaaaaattatgtgcgatttgtt 5428028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 16301209 - 16301252
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||  ||||||||||||||| |||||||    
T  16301209 atttgtttagtaaaattaaaaagaaaaattaggagcgatttgtt 16301252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 28950633 - 28950676
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||| || |||||||||| |||||||    
T  28950633 atttgtttagtaaaattaaggaaaacaattaggagcgatttgtt 28950676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 29186126 - 29186083
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||| |||| |||||||||||||||| |||||||    
T  29186126 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtt 29186083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 33074602 - 33074559
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||| |||||||||||||||||||| ||||| |||||||    
T  33074602 atttgtttaataaaattaaggagaaaaatttggagcgatttgtt 33074559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 33075122 - 33075079
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| | |||||||||||||| |||||||    
T  33075122 atttgtttagtaaaattaaagtgaaaaattaggagcgatttgtt 33075079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 33361964 - 33362007
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||| |||| |||||||||||||||| |||||||    
T  33361964 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtt 33362007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 33373665 - 33373622
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||||||||||||||| || | |||||||    
T  33373665 atttgtttagtaaaattaaggagaaaaattaagaacgatttgtt 33373622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 46624478 - 46624435
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||| ||||||||||||||||||||||||||| ||| |||||||    
T  46624478 atttttttagtaaaattaaggagaaaaattagaagcgatttgtt 46624435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 50563142 - 50563185
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||||||||||||||| |||  |||||||    
T  50563142 atttgtttagtaaaattaaggagaaaaattaagagaaatttgtt 50563185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 51964834 - 51964791
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||| ||||||||| |||||||||||||||| |||||||    
T  51964834 atttgtttaataaaattaaagagaaaaattaggagcgatttgtt 51964791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 52311111 - 52311154
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||| ||||||||| |||||||    
T  52311111 atttgtttagtaaaattaaagagaaagattaggagcgatttgtt 52311154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 52311893 - 52311936
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||| |||||||||||||||||||||||||||| || |||||||    
T  52311893 atttatttagtaaaattaaggagaaaaattaggtgcgatttgtt 52311936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 4893643 - 4893681
Alignment:
Q  14 tttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  4893643 tttagtaaaattaaggagataaattaggagcgatttgtt 4893681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 19320787 - 19320749
Alignment:
Q  14 tttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  19320787 tttagtaaaattaaggagataaattaggagcgatttgtt 19320749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 20130618 - 20130652
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggag 43  Q
    ||||||||||||||| |||||||||||||||||||    
T  20130618 atttgtttagtaaaactaaggagaaaaattaggag 20130652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 108
Target Start/End: Original strand, 28571396 - 28571442
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaata 108  Q
    ||||||||||||||||||||||| | ||||||||| ||||| |||||    
T  28571396 ttaacattttgattaaattaaacagtgttaattaaatatggttaata 28571442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 28572139 - 28572173
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaa 96  Q
    ||||||||||||||||||||||| |||||||||||    
T  28572139 ttaacattttgattaaattaaacagggttaattaa 28572173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 29184844 - 29184806
Alignment:
Q  14 tttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  29184844 tttagtaaaattaaggagataaattaggagcgatttgtt 29184806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 33363247 - 33363285
Alignment:
Q  14 tttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  33363247 tttaataaaattaaggagataaattaggagctatttgtt 33363285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 35598345 - 35598308
Alignment:
Q  56 taacaattaacattttgattaaattaaacggggttaat 93  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  35598345 taacaattaacattttgattaaattaaatagggttaat 35598308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 35599438 - 35599401
Alignment:
Q  56 taacaattaacattttgattaaattaaacggggttaat 93  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  35599438 taacaattaacattttgattaaattaaatagggttaat 35599401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 19321355 - 19321279
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    ||||||||||||| ||||||||| ||||||||||| || || ||  ||| |||||||||||| ||  ||||||||||||    
T  19321355 ttaacattttgatcaaattaaacagggttaattaaatagggtta--atacagtaaaattaagcaaagaagttaggttaa 19321279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 28572072 - 28572112
Alignment:
Q  12 tgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||| ||||||||| |||||||||||||||| |||||||    
T  28572072 tgtttaataaaattaaagagaaaaattaggagcgatttgtt 28572112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 33375406 - 33375366
Alignment:
Q  12 tgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||| ||||||||||||||  |||||||    
T  33375406 tgtttagtaaaattaagcagaaaaattaggagtgatttgtt 33375366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 50562395 - 50562471
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    |||||||||||||||||||||||  |||||||||| || || ||  ||| |||||||||||| ||  ||||||||||||    
T  50562395 ttaacattttgattaaattaaacaaggttaattaaatagggtta--atacagtaaaattaagcaaagaagttaggttaa 50562471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 138
Target Start/End: Original strand, 52311183 - 52311251
Alignment:
Q  70 ttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    ||||||||||||||| ||||||||||| || || ||  |||||||||||||||| ||  ||||||||||||    
T  52311183 ttgattaaattaaacagggttaattaaatagggtta--atatagtaaaattaagcaaagaagttaggttaa 52311251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 42348370 - 42348323
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgttcatt 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42348370 atttgtttagtaaaattaaggagaaaaattaggagctatttgttcatt 42348323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 26603397 - 26603537
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgttcat-----------taacaattaacattttgattaaattaaacggggttaattaac 97  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||           |||||||||||||||||||||||||| |  |||||||||||     
T  26603397 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtttatttcgatttccataacaattaacattttgattaaattagatagggttaattaaa 26603496  T
Q  98 tatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    || || ||  |||||||||||||||| ||  ||||||||||||    
T  26603497 tagggtta--atatagtaaaattaagcaaagaagttaggttaa 26603537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 8988872 - 8988915
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  8988872 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 8988915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 37351772 - 37351815
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  37351772 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 37351815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 37356671 - 37356714
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  37356671 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 37356714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 43023689 - 43023732
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  43023689 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 43023732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 42348652 - 42348603
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagc--tatttgttcatt 56  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  42348652 atttgtttagtaaaattaaggagaaaaattaggagcgatatttgttcatt 42348603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 50043008 - 50043048
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctattt 49  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  50043008 atttgtttagtaaaattaaggagaaaaattaggagcgattt 50043048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 3758305 - 3758348
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  3758305 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 3758348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 3758950 - 3758993
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  3758950 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 3758993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 5755268 - 5755311
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  5755268 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 5755311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 8531883 - 8531926
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||||||||||||||| |||| |||||||    
T  8531883 atttgtttagtaaaattaaggagaaaaattatgagcgatttgtt 8531926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 8987492 - 8987535
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  8987492 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 8987535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 9888398 - 9888355
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  9888398 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 9888355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 13172619 - 13172662
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  13172619 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 13172662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 17741333 - 17741376
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  17741333 atttgtttagtaaaattaagaagaaaaattaggagcgatttgtt 17741376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 20589989 - 20590032
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  20589989 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 20590032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 20590673 - 20590716
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  20590673 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 20590716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 24548340 - 24548383
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  24548340 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 24548383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 26602642 - 26602685
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||| ||||| |||||||    
T  26602642 atttgtttagtaaaattaaggagaaaaatttggagcgatttgtt 26602685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 29713496 - 29713539
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||| |||||||||||||||||||||||||| |||||||    
T  29713496 atttgtttaataaaattaaggagaaaaattaggagcgatttgtt 29713539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 37350392 - 37350435
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  37350392 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 37350435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 39405706 - 39405663
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  39405706 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 39405663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 47555796 - 47555753
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  47555796 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 47555753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 47556428 - 47556385
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  47556428 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 47556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 49355443 - 49355408
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagc 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  49355443 atttgtttagtaaaattaaggagaaaaattaggagc 49355408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 50118439 - 50118396
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  50118439 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 50118396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 50119077 - 50119034
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  50119077 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 50119034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 54866933 - 54866886
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgttcatt 56  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||    
T  54866933 atttgtttagtaaaattaaggagaaaaattatgagtgatttgttcatt 54866886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 8964510 - 8964548
Alignment:
Q  14 tttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  8964510 tttagtaaaattaaggagaaaaattaggagcgatttgtt 8964548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 39404976 - 39404943
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattagga 42  Q
    ||||||||||||||||||||||||||||||||||    
T  39404976 atttgtttagtaaaattaaggagaaaaattagga 39404943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 138
Target Start/End: Original strand, 46105261 - 46105338
Alignment:
Q  61 attaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    |||||||||||||||||||||||| ||||||||||| || || ||  ||| |||||||||||| ||  ||||||||||||    
T  46105261 attaacattttgattaaattaaacagggttaattaaatagggtta--atacagtaaaattaagcaaagaagttaggttaa 46105338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 46419745 - 46419704
Alignment:
Q  11 ttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  46419745 ttgtttagtaaaattaaggagaaagattaggagcgatttgtt 46419704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 20590059 - 20590135
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    ||||||||||||||||||||||| ||||||||||| || || ||  ||| |||||||||||| ||  ||||||||||||    
T  20590059 ttaacattttgattaaattaaacagggttaattaaatagggtta--atacagtaaaattaagcaaagaagttaggttaa 20590135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 24944969 - 24944893
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    ||||||||||||||||||||||| ||||||||||| || || ||  ||| |||||||||||| ||  ||||||||||||    
T  24944969 ttaacattttgattaaattaaacagggttaattaaatagggtta--atacagtaaaattaagcaaagaagttaggttaa 24944893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 46105192 - 46105232
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctattt 49  Q
    ||||||||||||||||||| |||||||||||||||| ||||    
T  46105192 atttgtttagtaaaattaaagagaaaaattaggagcgattt 46105232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 12681006 - 12680963
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||||||||||||||| | || |||||||    
T  12681006 atttgtttagtaaaattaaggagaaaaattacgtgcgatttgtt 12680963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 24549093 - 24549136
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||| |||||||||||||||||||||||| ||| |||||||    
T  24549093 atttgttcagtaaaattaaggagaaaaattagaagcgatttgtt 24549136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 40
Target Start/End: Complemental strand, 36742171 - 36742140
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattag 40  Q
    ||||||||||||||||||||||||||||||||    
T  36742171 atttgtttagtaaaattaaggagaaaaattag 36742140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 37061703 - 37061660
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||    
T  37061703 atttgtctagtaaaattaaggagaaaaattagaagcgatttgtt 37061660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 39713867 - 39713824
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||    
T  39713867 atttttttagtaaaattaaggagataaattaggagcgatttgtt 39713824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 52801285 - 52801328
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||| |||| |||||||||||||||| |||||||    
T  52801285 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtt 52801328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 108
Target Start/End: Original strand, 8987562 - 8987608
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaata 108  Q
    ||||||||||||||||||||||| | ||||||||| ||||| |||||    
T  8987562 ttaacattttgattaaattaaacagtgttaattaaatatggttaata 8987608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 8988194 - 8988228
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaa 96  Q
    ||||||||||||||||||||||| |||||||||||    
T  8988194 ttaacattttgattaaattaaacagggttaattaa 8988228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 108
Target Start/End: Original strand, 37350462 - 37350508
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaata 108  Q
    ||||||||||||||||||||||| | ||||||||| ||||| |||||    
T  37350462 ttaacattttgattaaattaaacagtgttaattaaatatggttaata 37350508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 37351094 - 37351128
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaa 96  Q
    ||||||||||||||||||||||| |||||||||||    
T  37351094 ttaacattttgattaaattaaacagggttaattaa 37351128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 39
Target Start/End: Original strand, 46106092 - 46106122
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaatta 39  Q
    |||||||||||||||||||||||||||||||    
T  46106092 atttgtttagtaaaattaaggagaaaaatta 46106122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 52802609 - 52802647
Alignment:
Q  14 tttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  52802609 tttagtaaaattaaggagataaattaggagcgatttgtt 52802647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 24944519 - 24944478
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttg 50  Q
    |||| ||||||||||||||||| ||||||||||||| |||||    
T  24944519 atttttttagtaaaattaaggataaaaattaggagcgatttg 24944478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 48808471 - 48808426
Alignment:
Q  63 taacattttgattaaattaaacggggttaattaactatggctaata 108  Q
    |||||||||||||||||||||  ||||||||||| || ||||||||    
T  48808471 taacattttgattaaattaaatagggttaattaaatagggctaata 48808426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 2117187 - 2117263
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    |||||||||||||||||||||||  |||||||||| || || ||  ||| |||||||||||| ||  ||||||||||||    
T  2117187 ttaacattttgattaaattaaacatggttaattaaatagggtta--atacagtaaaattaagcaaagaagttaggttaa 2117263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 8988127 - 8988167
Alignment:
Q  12 tgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||| ||||||||| |||||||||||||||| |||||||    
T  8988127 tgtttaataaaattaaagagaaaaattaggagcgatttgtt 8988167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 9887652 - 9887612
Alignment:
Q  12 tgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||| ||||||||| |||||||||||||||| |||||||    
T  9887652 tgtttaataaaattaaagagaaaaattaggagcgatttgtt 9887612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 24947685 - 24947609
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    ||||||||||||||||||||||  ||||||||||| || || ||  ||| |||||||||||| ||  ||||||||||||    
T  24947685 ttaacattttgattaaattaaagagggttaattaaatagggtta--atacagtaaaattaagcaaagaagttaggttaa 24947609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 37351027 - 37351067
Alignment:
Q  12 tgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||| ||||||||| |||||||||||||||| |||||||    
T  37351027 tgtttaataaaattaaagagaaaaattaggagcgatttgtt 37351067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 43022956 - 43022996
Alignment:
Q  12 tgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||| ||||||||| |||||||||||||||| |||||||    
T  43022956 tgtttaataaaattaaagagaaaaattaggagcgatttgtt 43022996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 9373953 - 9374048
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgttcat-----------taacaattaacattttgattaaattaaacggggttaat 93  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||           ||||||||||||||||||||||||||||  ||||||||    
T  9373953 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtttattttgatttccataacaattaacattttgattaaattaaatagggttaat 9374048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 36006479 - 36006577
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgttcat-----------taacaattaacattttgattaaattaaacggggttaattaa 96  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||           |||||||||||||||||||||||||| |  |||||||||||    
T  36006479 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtttattttgattttcataacaattaacattttgattaaattagatagggttaattaa 36006577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 8527185 - 8527142
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  8527185 atttgtttagtaaaattaaagagaaaaattaggagctatttgtt 8527142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 52842856 - 52842899
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  52842856 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 52842899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 9373449 - 9373544
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgttcat-----------taacaattaacattttgattaaattaaacggggttaat 93  Q
    |||||||||||||||||||||||||||||||||||  ||||||| ||           ||||||||||||||||||||||||||||| || |||||    
T  9373449 atttgtttagtaaaattaaggagaaaaattaggagtgatttgtttattttgatttctataacaattaacattttgattaaattaaaccggattaat 9373544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 19893548 - 19893507
Alignment:
Q  11 ttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  19893548 ttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 19893507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 46489283 - 46489320
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagcta 46  Q
    ||||||||||||||||||||||||||||||||||||||    
T  46489283 atttgtttagtaaaattaaggagaaaaattaggagcta 46489320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 51656555 - 51656460
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgttcat-----------taacaattaacattttgattaaattaaacggggttaat 93  Q
    ||||||||||||||||||||||||||||||| |||| ||||||| ||           ||||||||||||||||||||||||||||  ||||||||    
T  51656555 atttgtttagtaaaattaaggagaaaaattaagagcgatttgtttattttgatttccataacaattaacattttgattaaattaaatagggttaat 51656460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 8396435 - 8396478
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  8396435 atttgtttagtaaaattaaggagaaaaattagaagcaatttgtt 8396478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 9373182 - 9373246
Alignment:
Q  57 aacaattaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaag 123  Q
    |||||||||||||||||||||||||||  ||||||||||| || || ||  ||||||||||||||||    
T  9373182 aacaattaacattttgattaaattaaatagggttaattaaatagggtta--atatagtaaaattaag 9373246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 19361731 - 19361688
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  19361731 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 19361688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 19367811 - 19367768
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  19367811 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 19367768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 22521923 - 22521966
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||| ||||||||||||||||| |||||||    
T  22521923 atttgtttagtaaaattatggagaaaaattaggagcgatttgtt 22521966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 29529870 - 29529827
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  29529870 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 29529827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 35855820 - 35855863
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  35855820 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 35855863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 40822101 - 40822058
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||||| |||||||||||||| |||||||    
T  40822101 atttgtttagtaaaattaaggtgaaaaattaggagcgatttgtt 40822058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 48520027 - 48519984
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  48520027 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 48519984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 55290766 - 55290723
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  55290766 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 55290723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 53521729 - 53521824
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgttcat-----------taacaattaacattttgattaaattaaacggggttaat 93  Q
    |||| ||||||||||||||||| ||||||||||||| ||||||| ||           ||||||||||||||||||||||||||||  ||||||||    
T  53521729 atttatttagtaaaattaaggaaaaaaattaggagcgatttgtttatttcgatttccataacaattaacattttgattaaattaaatagggttaat 53521824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 35855890 - 35855966
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    ||||||||||||||||||||||| ||||||||||| || || ||  ||| |||||||||||| ||  ||||||||||||    
T  35855890 ttaacattttgattaaattaaacagggttaattaaatagggtta--atacagtaaaattaagcaaagaagttaggttaa 35855966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 39093595 - 39093635
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctattt 49  Q
    ||||||||||||||||||| |||||||||||||||| ||||    
T  39093595 atttgtttagtaaaattaaagagaaaaattaggagcgattt 39093635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 40822031 - 40821955
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    ||||||||||||||||||||||  ||||||||||| || || ||  |||||||||||||||| ||  ||||||||||||    
T  40822031 ttaacattttgattaaattaaatagggttaattaaatagggtta--atatagtaaaattaagcaaagaagttaggttaa 40821955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 19368451 - 19368408
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||| |||||||||||||| |||||||||||||||| |||||||    
T  19368451 atttatttagtaaaattaaagagaaaaattaggagcgatttgtt 19368408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 26101775 - 26101732
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||  ||| |||||||    
T  26101775 atttgtttagtaaaattaaggagaaaaattaaaagcgatttgtt 26101732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 26776807 - 26776764
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||||||||||||||| | || |||||||    
T  26776807 atttgtttagtaaaattaaggagaaaaattatgtgcgatttgtt 26776764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 29529123 - 29529080
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||    
T  29529123 atttgtttagtaaaattaaggagaaaatttagaagcgatttgtt 29529080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 39094221 - 39094264
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||| |||||||||||||||||| |||| |||||||    
T  39094221 atttgtttagtacaattaaggagaaaaattatgagcgatttgtt 39094264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 53801512 - 53801555
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||    
T  53801512 atttgtttagtaaaattaaagagaaaaattatgagcgatttgtt 53801555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 55293710 - 55293634
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    ||||||||||||||||||||||| ||||||||||| || |||| | ||| |||||||||||| ||  ||||||||||||    
T  55293710 ttaacattttgattaaattaaacagggttaattaaata-ggctta-atacagtaaaattaagcaaagaagttaggttaa 55293634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 4138732 - 4138694
Alignment:
Q  14 tttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  4138732 tttagtaaaattaaagagaaaaattaggagcgatttgtt 4138694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 140
Target Start/End: Complemental strand, 29529800 - 29529722
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaatt 140  Q
    ||||||||||||| ||||||||| ||||||||||| || || ||  ||| |||||||||||| ||  ||||||||||||||    
T  29529800 ttaacattttgatcaaattaaacagggttaattaaatagggtta--atacagtaaaattaagcaaagaagttaggttaatt 29529722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 9374138 - 9374175
Alignment:
Q  56 taacaattaacattttgattaaattaaacggggttaat 93  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  9374138 taacaattaacattttgattaaattaaatagggttaat 9374175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 53801582 - 53801658
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    |||||||||||||||||||||||  |||||||||| || || ||  ||| |||||||||||| ||  ||||||||||||    
T  53801582 ttaacattttgattaaattaaacaaggttaattaaatagggtta--atacagtaaaattaagcaaagaagttaggttaa 53801658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 14682 - 14725
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  14682 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 14725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 3683 - 3724
Alignment:
Q  11 ttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||  ||||||||||||||| |||||||    
T  3683 ttgtttagtaaaattaaacagaaaaattaggagcgatttgtt 3724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 11423 - 11464
Alignment:
Q  11 ttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||  ||||||||||||||| |||||||    
T  11423 ttgtttagtaaaattaaacagaaaaattaggagcgatttgtt 11464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 8160788 - 8160745
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  8160788 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 8160745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 8762684 - 8762727
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  8762684 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 8762727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 25834368 - 25834325
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  25834368 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 25834325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 32846880 - 32846923
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  32846880 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 32846923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 34894080 - 34894127
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgttcatt 56  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||    
T  34894080 atttgtttagtaaaattaaggagaaaaattatgagcgatttgttcatt 34894127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 40586813 - 40586766
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgttcatt 56  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||    
T  40586813 atttgtttagtaaaattaaggagaaaaattagaagcgatttgttcatt 40586766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 41532140 - 41532100
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctattt 49  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  41532140 atttgtttagtaaaattaaggagaaaaattaggagcgattt 41532100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 1943369 - 1943412
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  1943369 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 1943412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 8162260 - 8162217
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  8162260 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 8162217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 8761304 - 8761347
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  8761304 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 8761347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 9473793 - 9473836
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  9473793 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 9473836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 12761160 - 12761203
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  12761160 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 12761203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 24055510 - 24055553
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  24055510 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 24055553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 25346612 - 25346655
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||    
T  25346612 atttgtttagtaaaattaaagagaaaaattaggagatatttgtt 25346655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 25361185 - 25361228
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  25361185 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 25361228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 25835748 - 25835705
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  25835748 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 25835705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 32844754 - 32844797
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  32844754 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 32844797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 34894267 - 34894302
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagc 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  34894267 atttgtttagtaaaattaaggagaaaaattaggagc 34894302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 36777511 - 36777554
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  36777511 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 36777554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 41157581 - 41157624
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  41157581 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 41157624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 41158317 - 41158360
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||||||||||||||| |||| |||||||    
T  41158317 atttgtttagtaaaattaaggagaaaaattatgagcgatttgtt 41158360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 44381084 - 44381041
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  44381084 atttgcttagtaaaattaaggagaaaaattaggagcgatttgtt 44381041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 44381785 - 44381742
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||| | |||||||    
T  44381785 atttgtttagtaaaattaaggagaaaaattaggaccgatttgtt 44381742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 1944859 - 1944892
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattagga 42  Q
    ||||||||||||||||||||||||||||||||||    
T  1944859 atttgtttagtaaaattaaggagaaaaattagga 1944892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 44428582 - 44428549
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattagga 42  Q
    ||||||||||||||||||||||||||||||||||    
T  44428582 atttgtttagtaaaattaaggagaaaaattagga 44428549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 7390310 - 7390386
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    ||||||||||||||||||||||| ||||||||||| || || ||  ||| |||||||||||| ||  ||||||||||||    
T  7390310 ttaacattttgattaaattaaacagggttaattaaatagggtta--atacagtaaaattaagcaaagaagttaggttaa 7390386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 4465470 - 4465427
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||    
T  4465470 atttgtttagtaaaattaaagagaaaaattatgagcgatttgtt 4465427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 7390240 - 7390283
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||    
T  7390240 atttgtttagtaaaattaaagagaaaaattatgagcgatttgtt 7390283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 7390988 - 7391031
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||||||||||||||| | || |||||||    
T  7390988 atttgtttagtaaaattaaggagaaaaattatgtgcgatttgtt 7391031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 9473155 - 9473198
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||| | |||||||    
T  9473155 atttgtttagtaaaattaaagagaaaaattaggaacgatttgtt 9473198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 25618871 - 25618828
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||||||||||||||| | || |||||||    
T  25618871 atttgtttagtaaaattaaggagaaaaattatgtgcgatttgtt 25618828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 32846132 - 32846175
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| || ||||||||||||| |||||||    
T  32846132 atttgtttagtaaaattaaagaaaaaaattaggagcgatttgtt 32846175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 36778150 - 36778193
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||    
T  36778150 atttgtatagtaaaattaaggagaaaaattagaagcgatttgtt 36778193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 41978515 - 41978558
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||    
T  41978515 atttgtttagtaaaattaaagagaaaaattatgagcgatttgtt 41978558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 41978585 - 41978661
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaag-gaa-aagttaggttaa 138  Q
    ||||||||||||||||||||||| ||||||||||| || || ||  ||| |||||||||||| ||| ||||||||||||    
T  41978585 ttaacattttgattaaattaaacagggttaattaaatagggtta--atacagtaaaattaagcgaagaagttaggttaa 41978661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 42244707 - 42244664
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||| ||||||||||||||||||||||||||| ||| |||||||    
T  42244707 atttttttagtaaaattaaggagaaaaattagaagcgatttgtt 42244664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 108
Target Start/End: Original strand, 1943439 - 1943485
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaata 108  Q
    ||||||||||||||||||||||| | ||||||||| ||||| |||||    
T  1943439 ttaacattttgattaaattaaacagtgttaattaaatatggttaata 1943485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 8161447 - 8161413
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaa 96  Q
    ||||||||||||||||||||||| |||||||||||    
T  8161447 ttaacattttgattaaattaaacagggttaattaa 8161413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 8162190 - 8162144
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaata 108  Q
    ||||||||||||||||||||||| | ||||||||| ||||| |||||    
T  8162190 ttaacattttgattaaattaaacagtgttaattaaatatggttaata 8162144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 108
Target Start/End: Original strand, 8761374 - 8761420
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaata 108  Q
    ||||||||||||||||||||||| | ||||||||| ||||| |||||    
T  8761374 ttaacattttgattaaattaaacagtgttaattaaatatggttaata 8761420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 8762006 - 8762040
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaa 96  Q
    ||||||||||||||||||||||| |||||||||||    
T  8762006 ttaacattttgattaaattaaacagggttaattaa 8762040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 25619774 - 25619736
Alignment:
Q  14 tttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  25619774 tttagtaaaattaaagagaaaaattaggagcgatttgtt 25619736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 25835046 - 25835012
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaa 96  Q
    ||||||||||||||||||||||| |||||||||||    
T  25835046 ttaacattttgattaaattaaacagggttaattaa 25835012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 25835678 - 25835632
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaata 108  Q
    ||||||||||||||||||||||| | ||||||||| ||||| |||||    
T  25835678 ttaacattttgattaaattaaacagtgttaattaaatatggttaata 25835632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 32845569 - 32845603
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaa 96  Q
    ||||||||||||||||||||||| |||||||||||    
T  32845569 ttaacattttgattaaattaaacagggttaattaa 32845603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 108
Target Start/End: Original strand, 32846202 - 32846248
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaata 108  Q
    ||||||||||||||||||||||| | ||||||||| ||||| |||||    
T  32846202 ttaacattttgattaaattaaacagtgttaattaaatatggttaata 32846248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 38295353 - 38295390
Alignment:
Q  56 taacaattaacattttgattaaattaaacggggttaat 93  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  38295353 taacaattaacattttgattaaattaaatagggttaat 38295390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 4465400 - 4465324
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    |||||||||||||||||||||||  |||||||||| || || ||  ||| |||||||||||| ||  ||||||||||||    
T  4465400 ttaacattttgattaaattaaacatggttaattaaatagggtta--atacagtaaaattaagcaaagaagttaggttaa 4465324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 8161514 - 8161474
Alignment:
Q  12 tgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||| ||||||||| |||||||||||||||| |||||||    
T  8161514 tgtttaataaaattaaagagaaaaattaggagcgatttgtt 8161474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 8761939 - 8761979
Alignment:
Q  12 tgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||| ||||||||| |||||||||||||||| |||||||    
T  8761939 tgtttaataaaattaaagagaaaaattaggagcgatttgtt 8761979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 25835113 - 25835073
Alignment:
Q  12 tgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||| ||||||||| |||||||||||||||| |||||||    
T  25835113 tgtttaataaaattaaagagaaaaattaggagcgatttgtt 25835073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 32845502 - 32845542
Alignment:
Q  12 tgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||| ||||||||| |||||||||||||||| |||||||    
T  32845502 tgtttaataaaattaaagagaaaaattaggagcgatttgtt 32845542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 41532762 - 41532686
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaag--gaaaagttaggttaa 138  Q
    |||||||||||||||||||||||  |||||||||| || || ||  ||| ||||||||||||   ||||||||||||||    
T  41532762 ttaacattttgattaaattaaacatggttaattaaatagggtta--atacagtaaaattaagcaaaaaagttaggttaa 41532686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 9151089 - 9151132
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  9151089 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 9151132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 690958 - 691001
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  690958 atttgtttagtaaaattaaggagaaaaattagaagcaatttgtt 691001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 4849374 - 4849417
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  4849374 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 4849417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 7855335 - 7855292
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  7855335 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 7855292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 7856090 - 7856047
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  7856090 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 7856047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 11835346 - 11835303
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||| ||||||||||||||||| |||||||    
T  11835346 atttgtttagtaaaattatggagaaaaattaggagcgatttgtt 11835303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 21669603 - 21669560
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||| |||||||||||||||||||| ||||||||||||||    
T  21669603 atttgtttggtaaaattaaggagaaaaatcaggagctatttgtt 21669560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 27733325 - 27733282
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  27733325 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 27733282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 137
Target Start/End: Original strand, 29468439 - 29468514
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggtta 137  Q
    ||||||||||||||||||||||| ||||||||||| || || ||  |||||||||||||||| ||  |||||||||||    
T  29468439 ttaacattttgattaaattaaacagggttaattaaatagggtta--atatagtaaaattaagcaaagaagttaggtta 29468514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 29468889 - 29468932
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||| |||||||||||||||||||||||||| |||||||    
T  29468889 atttgtttaataaaattaaggagaaaaattaggagcgatttgtt 29468932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 34872748 - 34872791
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  34872748 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 34872791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 34873490 - 34873533
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  34873490 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 34873533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 35155860 - 35155817
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  35155860 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 35155817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 39277920 - 39277963
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||| |||||||||||||||||||| ||||||||||||||    
T  39277920 atttgtttggtaaaattaaggagaaaaatcaggagctatttgtt 39277963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 44806248 - 44806291
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  44806248 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 44806291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 49145281 - 49145238
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  49145281 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 49145238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 9150637 - 9150696
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaag 123  Q
    ||||||||||||||||||||||| ||||||||||| || || ||  ||||||||||||||||    
T  9150637 ttaacattttgattaaattaaacagggttaattaaatagggtta--atatagtaaaattaag 9150696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 24682662 - 24682629
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattagga 42  Q
    ||||||||||||||||||||||||||||||||||    
T  24682662 atttgtttagtaaaattaaggagaaaaattagga 24682629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 4849443 - 4849478
Alignment:
Q  61 attaacattttgattaaattaaacggggttaattaa 96  Q
    |||||||||||||||||||||||| |||||||||||    
T  4849443 attaacattttgattaaattaaacagggttaattaa 4849478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 9150567 - 9150610
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||  |||||||    
T  9150567 atttgtttagtaaaattaaagagaaaaattaggagtgatttgtt 9150610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 17171287 - 17171330
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||| |||| |||||||||||||||| |||||||    
T  17171287 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtt 17171330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 24684139 - 24684096
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||| ||| |||||||||||||||| |||||||    
T  24684139 atttgtttagtaaaactaaagagaaaaattaggagcgatttgtt 24684096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 31897185 - 31897142
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||    
T  31897185 atttttttagtaaaattaaggagataaattaggagcgatttgtt 31897142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 34989411 - 34989454
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||| |||||||||||||||||||||||||| |||| |||||||    
T  34989411 atttctttagtaaaattaaggagaaaaattaagagcaatttgtt 34989454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 35156498 - 35156455
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||| | |||||||    
T  35156498 atttgtttagtaaaattaaagagaaaaattaggatcgatttgtt 35156455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 39648973 - 39648930
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||| |||| |||||||||||||||| |||||||    
T  39648973 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtt 39648930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 44805500 - 44805543
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||| |||| |||||||||||||||| |||||||    
T  44805500 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtt 44805543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 17172569 - 17172607
Alignment:
Q  14 tttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  17172569 tttagtaaaattaaggagataaattaggagcgatttgtt 17172607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 24684069 - 24684023
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaata 108  Q
    ||||||||||||||||||||||| | ||||||||| ||||| |||||    
T  24684069 ttaacattttgattaaattaaacagtgttaattaaatatggttaata 24684023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 140
Target Start/End: Complemental strand, 35156428 - 35156350
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaatt 140  Q
    ||||||||||||| ||||||||| ||||||||||| || || ||  ||| |||||||||||| ||  ||||||||||||||    
T  35156428 ttaacattttgatcaaattaaacagggttaattaaatagggtta--atacagtaaaattaagcaaagaagttaggttaatt 35156350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 44805570 - 44805648
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaatt 140  Q
    ||||||||||||| ||||||||| ||||||||||| || || ||  ||| |||||||||||| ||  ||||||||||||||    
T  44805570 ttaacattttgatcaaattaaacagggttaattaaatagggtta--atacagtaaaattaagcaaagaagttaggttaatt 44805648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 48527778 - 48527740
Alignment:
Q  14 tttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  48527778 tttagtaaaattaaggagataaattaggagcgatttgtt 48527740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 138
Target Start/End: Complemental strand, 49145081 - 49145004
Alignment:
Q  61 attaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    ||||||||||||||||||||||||  |||||||||| || || ||  ||| |||||||||||| ||  ||||||||||||    
T  49145081 attaacattttgattaaattaaacatggttaattaaatagggtta--atacagtaaaattaagcaaagaagttaggttaa 49145004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 29468369 - 29468409
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctattt 49  Q
    ||||||||||||||||||| | |||||||||||||| ||||    
T  29468369 atttgtttagtaaaattaaagtgaaaaattaggagcgattt 29468409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 9979080 - 9979037
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  9979080 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 9979037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 21055513 - 21055556
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  21055513 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 21055556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 21059285 - 21059328
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  21059285 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 21059328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 4621504 - 4621406
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgttcat-----------taacaattaacattttgattaaattaaacggggttaattaa 96  Q
    |||||||||||||||||||||||||||||||| ||| ||||||| ||           |||||||||| |||||||||||||||||  |||||||||||    
T  4621504 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccataacaattaatattttgattaaattaaatagggttaattaa 4621406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 14832778 - 14832854
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaag--gaaaagttaggttaa 138  Q
    ||||||||||||||||||||||| ||||||||||| || || ||  ||||||||||||||||   ||||||||||||||    
T  14832778 ttaacattttgattaaattaaacagggttaattaaatagggtta--atatagtaaaattaagcaaaaaagttaggttaa 14832854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 35159791 - 35159831
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctattt 49  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  35159791 atttgtttagtaaaattaaggagaaaaattaggagcgattt 35159831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 4108980 - 4109023
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  4108980 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 4109023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 4896891 - 4896816
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggtta 137  Q
    ||||||||||||||||||||||| ||||||||||| || || ||  |||||||||||||||| ||  |||||||||||    
T  4896891 ttaacattttgattaaattaaacagggttaattaaatagggtta--atatagtaaaattaagcaaagaagttaggtta 4896816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 6966609 - 6966566
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  6966609 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 6966566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 9736068 - 9736025
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  9736068 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 9736025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 14832708 - 14832751
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  14832708 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 14832751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 15044199 - 15044156
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||| |||||||||||||||||||| ||||||||||||||    
T  15044199 atttgtttggtaaaattaaggagaaaaatcaggagctatttgtt 15044156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 35159113 - 35159156
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  35159113 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 35159156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 138
Target Start/End: Original strand, 4109049 - 4109126
Alignment:
Q  61 attaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    |||||||||||||||||||||||| ||||||||||| || || ||  ||| |||||||||||| ||  ||||||||||||    
T  4109049 attaacattttgattaaattaaacagggttaattaaatagggtta--atacagtaaaattaagcaaagaagttaggttaa 4109126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 33319924 - 33319884
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctattt 49  Q
    ||||||||||||||||||||||||||||||| |||| ||||    
T  33319924 atttgtttagtaaaattaaggagaaaaattatgagcgattt 33319884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 1220781 - 1220824
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||| |||| |||||||||||||||| |||||||    
T  1220781 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtt 1220824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 4896332 - 4896297
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagc 44  Q
    ||||||||| ||||||||||||||||||||||||||    
T  4896332 atttgtttaataaaattaaggagaaaaattaggagc 4896297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 4896961 - 4896918
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| | |||||||||||||| |||||||    
T  4896961 atttgtttagtaaaattaaagtgaaaaattaggagcgatttgtt 4896918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 21078526 - 21078569
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||| ||||| ||||||||||||||||||||| |||||||    
T  21078526 atttgtttggtaaagttaaggagaaaaattaggagcgatttgtt 21078569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 24446188 - 24446231
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||| |||| |||||||||||||||| |||||||    
T  24446188 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtt 24446231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 33320551 - 33320508
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||  |||||||    
T  33320551 atttgtttagtaaaattaaagagaaaaattaggagtgatttgtt 33320508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 39
Target Start/End: Original strand, 4109726 - 4109756
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaatta 39  Q
    |||||||||||||||||||||||||||||||    
T  4109726 atttgtttagtaaaattaaggagaaaaatta 4109756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 24447470 - 24447508
Alignment:
Q  14 tttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  24447470 tttagtaaaattaaggagataaattaggagcgatttgtt 24447508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 752440 - 752397
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  752440 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 752397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 2182509 - 2182552
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  2182509 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 2182552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 27440952 - 27440905
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgttcatt 56  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||    
T  27440952 atttgtttagtaaaattaaggagaaaaattaagagcgatttgttcatt 27440905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 33705127 - 33705084
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  33705127 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 33705084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 43136645 - 43136602
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  43136645 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 43136602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 3086787 - 3086692
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgttcat-----------taacaattaacattttgattaaattaaacggggttaat 93  Q
    |||||||||||||||||||||||||||||||| ||| ||||||| ||           ||||||||||||||||||||||||||||  ||||||||    
T  3086787 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacattttgattaaattaaatagggttaat 3086692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 38937343 - 38937438
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgttcat-----------taacaattaacattttgattaaattaaacggggttaat 93  Q
    ||||||||||||||||||||||||||||||||| || ||||||| ||           ||||||||||||||||||||||||||||  ||||||||    
T  38937343 atttgtttagtaaaattaaggagaaaaattaggggcgatttgtttatttcgatttccataacaattaacattttgattaaattaaatagggttaat 38937438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 753931 - 753888
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  753931 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 753888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 6304925 - 6304882
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  6304925 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 6304882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 12419564 - 12419521
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  12419564 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 12419521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 17637812 - 17637769
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  17637812 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 17637769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 26601669 - 26601626
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  26601669 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 26601626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 30755410 - 30755453
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  30755410 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 30755453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 33705760 - 33705717
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  33705760 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 33705717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 36885152 - 36885109
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  36885152 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 36885109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 42975761 - 42975718
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  42975761 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 42975718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 42976392 - 42976349
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  42976392 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 42976349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 42977028 - 42976985
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  42977028 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 42976985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 43138025 - 43137982
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  43138025 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 43137982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 17637055 - 17637014
Alignment:
Q  11 ttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||| ||| |||||||    
T  17637055 ttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 17637014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 2181770 - 2181813
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||  |||||||    
T  2181770 atttgtttagtaaaattaaagagaaaaattaggagtgatttgtt 2181813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 140
Target Start/End: Complemental strand, 17637742 - 17637665
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaatt 140  Q
    ||||||||||||| ||||||||| ||||||||||| || || |||||   |||||||||||| ||  ||||||||||||||    
T  17637742 ttaacattttgatcaaattaaacagggttaattaaatagggttaata---agtaaaattaagcaaagaagttaggttaatt 17637665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 25695909 - 25695866
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||    
T  25695909 atttttttagtaaaattaaggagataaattaggagcgatttgtt 25695866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 30180350 - 30180393
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||| |||| |||||||||||||||| |||||||    
T  30180350 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtt 30180393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 39915362 - 39915409
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgttcatt 56  Q
    ||||| |||||||||||||| | ||||||||||||| |||||||||||    
T  39915362 atttggttagtaaaattaagaaaaaaaattaggagcgatttgttcatt 39915409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 41691535 - 41691578
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||| |||| |||||||||||||||| |||||||    
T  41691535 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtt 41691578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 753118 - 753084
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaa 96  Q
    ||||||||||||||||||||||| |||||||||||    
T  753118 ttaacattttgattaaattaaacagggttaattaa 753084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 753861 - 753815
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaata 108  Q
    ||||||||||||||||||||||| | ||||||||| ||||| |||||    
T  753861 ttaacattttgattaaattaaacagtgttaattaaatatggttaata 753815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 34719133 - 34719171
Alignment:
Q  14 tttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  34719133 tttagtaaaattaaggagataaattaggagcgatttgtt 34719171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 41692817 - 41692855
Alignment:
Q  14 tttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  41692817 tttagtaaaattaaggagataaattaggagcgatttgtt 41692855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 43137323 - 43137289
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaa 96  Q
    ||||||||||||||||||||||| |||||||||||    
T  43137323 ttaacattttgattaaattaaacagggttaattaa 43137289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 43137955 - 43137909
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaata 108  Q
    ||||||||||||||||||||||| | ||||||||| ||||| |||||    
T  43137955 ttaacattttgattaaattaaacagtgttaattaaatatggttaata 43137909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 753185 - 753145
Alignment:
Q  12 tgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||| ||||||||| |||||||||||||||| |||||||    
T  753185 tgtttaataaaattaaagagaaaaattaggagcgatttgtt 753145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 6304855 - 6304779
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    |||||||||||||||||||||||   ||||||||| ||||| ||  ||| |||||||||||| ||  ||||||||||||    
T  6304855 ttaacattttgattaaattaaacaatgttaattaaatatggtta--atacagtaaaattaagcaaagaagttaggttaa 6304779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 26601599 - 26601523
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    |||||||||||||||||||||||  |||||||||| || || ||  ||| |||||||||||| ||  ||||||||||||    
T  26601599 ttaacattttgattaaattaaacatggttaattaaatagggtta--atacagtaaaattaagcaaagaagttaggttaa 26601523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 36886037 - 36886005
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattagg 41  Q
    ||||||||||||||||||| |||||||||||||    
T  36886037 atttgtttagtaaaattaaagagaaaaattagg 36886005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 43137390 - 43137350
Alignment:
Q  12 tgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||| ||||||||| |||||||||||||||| |||||||    
T  43137390 tgtttaataaaattaaagagaaaaattaggagcgatttgtt 43137350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 1513231 - 1513188
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  1513231 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 1513188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 6931577 - 6931620
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  6931577 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt 6931620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 15783430 - 15783477
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgttcatt 56  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||    
T  15783430 atttgtttagtaaaattaaggagaaaaattagaagcaatttgttcatt 15783477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 6931055 - 6931098
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  6931055 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 6931098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 10875513 - 10875470
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  10875513 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 10875470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 17838145 - 17838188
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||| |||||||||||||||||||||||||| |||||||    
T  17838145 atttgtttaataaaattaaggagaaaaattaggagcgatttgtt 17838188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 18091719 - 18091676
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  18091719 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 18091676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 19487947 - 19487990
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  19487947 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 19487990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 32676128 - 32676085
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||| |||||||||||||||||||||||||| |||||||    
T  32676128 atttgtttaataaaattaaggagaaaaattaggagcgatttgtt 32676085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 42781597 - 42781640
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  42781597 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 42781640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 42782344 - 42782387
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  42782344 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 42782387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 25235298 - 25235258
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctattt 49  Q
    |||||||||||||||||||||||||||||||| ||| ||||    
T  25235298 atttgtttagtaaaattaaggagaaaaattagaagcgattt 25235258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 28608941 - 28609017
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    ||||||||||||||||||||||| ||||||||||| || || ||  ||| |||||||||||| ||  ||||||||||||    
T  28608941 ttaacattttgattaaattaaacagggttaattaaatagggtta--atacagtaaaattaagcaaagaagttaggttaa 28609017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 28609672 - 28609748
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    ||||||||||||||||||||||| ||| ||||||| || || ||  |||||||||||||||| ||  ||||||||||||    
T  28609672 ttaacattttgattaaattaaacagggataattaaatagggtta--atatagtaaaattaagcaaagaagttaggttaa 28609748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 1513878 - 1513835
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||| | |||||||    
T  1513878 atttgtttagtaaaattaaagagaaaaattaggaccgatttgtt 1513835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 4290674 - 4290631
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||| |||| |||||||||||||||| |||||||    
T  4290674 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtt 4290631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 40
Target Start/End: Complemental strand, 10874770 - 10874739
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattag 40  Q
    ||||||||||||||||||||||||||||||||    
T  10874770 atttgtttagtaaaattaaggagaaaaattag 10874739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 19485306 - 19485263
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  19485306 atttgtttagtaaaattaaagagaaaaattagcagcgatttgtt 19485263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 25235455 - 25235412
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  25235455 atttgtttagtaaaattaagcagaaaaattaggagtgatttgtt 25235412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 28608871 - 28608914
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||| |||| |||||||||||||||| |||||||    
T  28608871 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtt 28608914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 28609602 - 28609645
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  28609602 atttgtttagtaaaattaaagagaaaaattagaagcaatttgtt 28609645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 32676652 - 32676609
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| | |||||||||||||| |||||||    
T  32676652 atttgtttagtaaaattaaagtgaaaaattaggagcgatttgtt 32676609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 4289394 - 4289356
Alignment:
Q  14 tttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  4289394 tttagtaaaattaaggagataaattaggagcgatttgtt 4289356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 32676582 - 32676548
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaa 96  Q
    ||||||||||||||||||||||| |||||||||||    
T  32676582 ttaacattttgattaaattaaacagggttaattaa 32676548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 1513808 - 1513732
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    |||||||||||||||||||||||  |||||||||| || || ||  ||| |||||||||||| ||  ||||||||||||    
T  1513808 ttaacattttgattaaattaaacatggttaattaaatagggtta--atacagtaaaattaagcaaataagttaggttaa 1513732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 19487191 - 19487231
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctattt 49  Q
    ||||||||||||||||||| || ||||||||||||| ||||    
T  19487191 atttgtttagtaaaattaaagataaaaattaggagcgattt 19487231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 138
Target Start/End: Complemental strand, 3885 - 3808
Alignment:
Q  61 attaacattttgattaaattaaacggggttaattaactatggctaatatatagtaaaattaaggaa--aagttaggttaa 138  Q
    |||||||||||||||||||||||| ||||||||||| || || ||  |||||||||||||||| ||  ||||||||||||    
T  3885 attaacattttgattaaattaaacagggttaattaaatagggtta--atatagtaaaattaagcaaagaagttaggttaa 3808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 10403 - 10360
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  10403 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 10360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 8547 - 8504
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  8547 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 8504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 9179 - 9136
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||    
T  9179 atttgtttagtaaaattaaagagaaaaattaggagatatttgtt 9136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 10146 - 10189
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  10146 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 10189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 10892 - 10932
Alignment:
Q  12 tgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||| ||||||||| |||||||||||||||| |||||||    
T  10892 tgtttaataaaattaaagagaaaaattaggagcgatttgtt 10932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 8962 - 8919
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||||||  |||||||    
T  8962 atttgtttagtaaaattaaggagaaaaattaggagtgatttgtt 8919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 9713 - 9670
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  9713 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtt 9670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 139259 - 139302
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  139259 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtt 139302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 232234 - 232277
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||| |||| |||||||||||||||| |||||||    
T  232234 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtt 232277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 232867 - 232910
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||    
T  232867 atttgtttagtagaattatggagaaaaattaggagcgatttgtt 232910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 232304 - 232338
Alignment:
Q  62 ttaacattttgattaaattaaacggggttaattaa 96  Q
    ||||||||||||||||||||||| |||||||||||    
T  232304 ttaacattttgattaaattaaacagggttaattaa 232338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 18406 - 18363
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaattaggagctatttgtt 52  Q
    |||||||||||||| |||| |||||||||||||||| |||||||    
T  18406 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtt 18363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 17768 - 17731
Alignment:
Q  14 tttagtaaaattaaggagaaaaattaggagctatttgt 51  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  17768 tttagtaaaattaaggagataaattaggagcgatttgt 17731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 39
Target Start/End: Original strand, 55229 - 55259
Alignment:
Q  9 atttgtttagtaaaattaaggagaaaaatta 39  Q
    |||||||||||||||||||||||||||||||    
T  55229 atttgtttagtaaaattaaggagaaaaatta 55259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University