View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18036_low_2 (Length: 470)

Name: NF18036_low_2
Description: NF18036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18036_low_2
NF18036_low_2
[»] chr3 (5 HSPs)
chr3 (8-451)||(32103249-32103702)
chr3 (194-451)||(32117371-32117637)
chr3 (271-451)||(32109093-32109273)
chr3 (110-138)||(52769944-52769972)
chr3 (110-138)||(54990789-54990817)
[»] chr2 (3 HSPs)
chr2 (145-222)||(35993340-35993417)
chr2 (110-138)||(38854423-38854451)
chr2 (153-185)||(43065447-43065479)
[»] chr6 (4 HSPs)
chr6 (137-228)||(34939769-34939860)
chr6 (110-139)||(18263926-18263955)
chr6 (110-139)||(18562599-18562628)
chr6 (145-185)||(9027611-9027651)
[»] chr1 (6 HSPs)
chr1 (145-242)||(28689392-28689489)
chr1 (110-139)||(36124919-36124948)
chr1 (111-139)||(3799992-3800020)
chr1 (110-138)||(12587356-12587384)
chr1 (153-185)||(15687083-15687115)
chr1 (111-139)||(50901667-50901695)
[»] chr4 (8 HSPs)
chr4 (170-242)||(25896842-25896914)
chr4 (145-185)||(30024739-30024779)
chr4 (110-139)||(12793872-12793901)
chr4 (145-185)||(4691881-4691921)
chr4 (110-138)||(7949415-7949443)
chr4 (111-139)||(35818175-35818203)
chr4 (110-138)||(37720175-37720203)
chr4 (110-138)||(47386752-47386780)
[»] scaffold0258 (1 HSPs)
scaffold0258 (110-139)||(15284-15313)
[»] chr8 (5 HSPs)
chr8 (110-139)||(8485085-8485114)
chr8 (111-139)||(968448-968476)
chr8 (110-138)||(7347924-7347952)
chr8 (148-228)||(11569411-11569491)
chr8 (137-185)||(25869263-25869311)
[»] chr7 (5 HSPs)
chr7 (110-139)||(30579421-30579450)
chr7 (110-139)||(41487445-41487474)
chr7 (111-139)||(22932674-22932702)
chr7 (110-138)||(41519226-41519254)
chr7 (111-139)||(48772024-48772052)
[»] chr5 (4 HSPs)
chr5 (110-139)||(15486291-15486320)
chr5 (110-139)||(16773893-16773922)
chr5 (111-139)||(4793042-4793070)
chr5 (110-138)||(17028225-17028253)


Alignment Details
Target: chr3 (Bit Score: 333; Significance: 0; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 8 - 451
Target Start/End: Complemental strand, 32103702 - 32103249
Alignment:
Q  8 agataattctttaacacgatgaaataaagataatattttctcatataagctataaagctgttttcaaagttatacttgagattttatgannnnnnnnnnn 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||               
T  32103702 agataattctttaacacgatgaaataaagataatattttctcatataagctataaagctgttttcaaagttatccttgagattttatgattttttttttt 32103603  T
Q  108 nn---------gaagaagctaaattagccc--acctaaattggagattttatgaatataagctgaaaacaatatatggacatgtcataaactttttctaa 196  Q
               |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32103602 ttttttgttttgaagaagctaaattagcccccacctaaattggagattttatgaatataagctgaaaacaatatatggacatgtcataaactttttctaa 32103503  T
Q  197 aagatcgcctaaacagtatcacaagtgtttatactggtagataaacataaatgagtctatccagacaaacctatatcatgaactttattgtatgcaggcg 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32103502 aagatcgcctaaacagtatcacaagtgtttatactggtagataaacataa-tgagtctatccagacaaacctatatcacgaactttattgtatgcaggcg 32103404  T
Q  297 ttcaaaatagctgtggccgattctgatacagttttgagccctctaatgcgtgaaatcaaggaagttgatcctgatgggaaagcggtgaccaaggtggtac 396  Q
    ||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32103403 ttcaagatagctgtggccaattctgatacggttttgagccctctaatgcgtgaaatcaaggaagttggtcctgatgggaaagcggtgaccaaggtggtac 32103304  T
Q  397 ctgctgtgtctgaagaagtgaagaattctctactgatgaacattagaagacgaat 451  Q
    || |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  32103303 cttctgtgtctgaagaaatgaagaattctctactgatgaacattagaagacgaat 32103249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 194 - 451
Target Start/End: Complemental strand, 32117637 - 32117371
Alignment:
Q  194 taaaagatcgcctaaacagtatcacaagtgtttatactggtagataaac----at---aaatgagtctatccagacaaacctat--atcatgaactttat 284  Q
    ||||||||| ||| ||||| ||||| |||||||||||||||||||||||    ||   ||||||||| ||||| ||| |||  |  |||||  |||||||    
T  32117637 taaaagatctcctgaacaggatcactagtgtttatactggtagataaactcaaatgtcaaatgagtcaatccaaacagacccctgcatcatagactttat 32117538  T
Q  285 tgtatgcaggcgttcaaaatagctgtggccgattctgatacagttttgagccctctaatgcgtgaaatcaaggaagttgatcctgatgggaaagcggtga 384  Q
    ||| | ||||||||||||| || | |||| ||| ||||| | ||||||||| | || | |||||||||||||||||||| |||||||||| |||  ||||    
T  32117537 tgtgtacaggcgttcaaaagagttttggctgatcctgatgcggttttgagcgcactcacgcgtgaaatcaaggaagttggtcctgatgggcaagaagtga 32117438  T
Q  385 ccaaggtggtacctgctgtgtctgaagaagtgaagaattctctactgatgaacattagaagacgaat 451  Q
    | ||||||||||||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||    
T  32117437 ctaaggtggtacctgctgtatctgaagaagtgaaggaatctctactgatgaatattagaagacgaat 32117371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 271 - 451
Target Start/End: Complemental strand, 32109273 - 32109093
Alignment:
Q  271 atcatgaactttattgtatgcaggcgttcaaaatagctgtggccgattctgatacagttttgagccctctaatgcgtgaaatcaaggaagttgatcctga 370  Q
    ||||||||||||||||||||||||| |||||||| | |||||| ||| ||||||  ||||||||| |||| | |||||| ||||||||||||| ||||||    
T  32109273 atcatgaactttattgtatgcaggcattcaaaattgttgtggcagatcctgataaggttttgagcactctcacgcgtgagatcaaggaagttggtcctga 32109174  T
Q  371 tgggaaagcggtgaccaaggtggtacctgctgtgtctgaagaagtgaagaattctctactgatgaacattagaagacgaat 451  Q
    |||| |||  ||||||||||||||||||||||| ||||||||| ||||| |||||||  |||  || ||||||||||||||    
T  32109173 tgggcaagaagtgaccaaggtggtacctgctgtatctgaagaactgaaggattctctggtgaataatattagaagacgaat 32109093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 138
Target Start/End: Original strand, 52769944 - 52769972
Alignment:
Q  110 gaagaagctaaattagcccacctaaattg 138  Q
    |||||||||||||||||||||||||||||    
T  52769944 gaagaagctaaattagcccacctaaattg 52769972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 138
Target Start/End: Complemental strand, 54990817 - 54990789
Alignment:
Q  110 gaagaagctaaattagcccacctaaattg 138  Q
    |||||||||||||||||||||||||||||    
T  54990817 gaagaagctaaattagcccacctaaattg 54990789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 35993417 - 35993340
Alignment:
Q  145 ttatgaatataagctgaaaacaatatatggacatgtcataaactttttctaaaagatcgcctaaacagtatcacaagt 222  Q
    ||||||| |||||||||||||||| |||||||| |||||||||| ||| ||  || || || ||||||||||||||||    
T  35993417 ttatgaaaataagctgaaaacaatttatggacacgtcataaactgtttatatcagctctcccaaacagtatcacaagt 35993340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 138
Target Start/End: Original strand, 38854423 - 38854451
Alignment:
Q  110 gaagaagctaaattagcccacctaaattg 138  Q
    |||||||||||||||||||||||||||||    
T  38854423 gaagaagctaaattagcccacctaaattg 38854451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 43065479 - 43065447
Alignment:
Q  153 ataagctgaaaacaatatatggacatgtcataa 185  Q
    |||||||||||||||| ||||||||||||||||    
T  43065479 ataagctgaaaacaatttatggacatgtcataa 43065447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 228
Target Start/End: Original strand, 34939769 - 34939860
Alignment:
Q  137 tggagattttatgaatataagctgaaaacaatatatggacatgtcataaactttttctaaaagatcgcctaaacagtatcacaagtgtttat 228  Q
    |||||| |||||| | |||||||||||||||| |||||||||||||||| || ||||   ||| || || ||||||| |||||| |||||||    
T  34939769 tggagagtttatggaaataagctgaaaacaatttatggacatgtcataagctgtttccgtaagctctccaaaacagtttcacaaatgtttat 34939860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 139
Target Start/End: Complemental strand, 18263955 - 18263926
Alignment:
Q  110 gaagaagctaaattagcccacctaaattgg 139  Q
    ||||||||||||||||||||||||||||||    
T  18263955 gaagaagctaaattagcccacctaaattgg 18263926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 139
Target Start/End: Original strand, 18562599 - 18562628
Alignment:
Q  110 gaagaagctaaattagcccacctaaattgg 139  Q
    ||||||||||||||||||||||||||||||    
T  18562599 gaagaagctaaattagcccacctaaattgg 18562628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 9027611 - 9027651
Alignment:
Q  145 ttatgaatataagctgaaaacaatatatggacatgtcataa 185  Q
    ||||||| |||||||||||||||  ||||||||||||||||    
T  9027611 ttatgaaaataagctgaaaacaacttatggacatgtcataa 9027651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000007; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 28689489 - 28689392
Alignment:
Q  145 ttatgaatataagctgaaaacaatatatggacatgtcataaactttttctaaaagatcgcctaaacagtatcacaagtgtttatactggtagataaac 242  Q
    ||||||| |||||||||||||||  |||||||||||||||| || ||||   ||| || |  ||||||||||  ||||||| |||| |||||||||||    
T  28689489 ttatgaaaataagctgaaaacaacttatggacatgtcataagctgtttccgtaagttctctaaaacagtatctgaagtgttaataccggtagataaac 28689392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 139
Target Start/End: Complemental strand, 36124948 - 36124919
Alignment:
Q  110 gaagaagctaaattagcccacctaaattgg 139  Q
    ||||||||||||||||||||||||||||||    
T  36124948 gaagaagctaaattagcccacctaaattgg 36124919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 139
Target Start/End: Complemental strand, 3800020 - 3799992
Alignment:
Q  111 aagaagctaaattagcccacctaaattgg 139  Q
    |||||||||||||||||||||||||||||    
T  3800020 aagaagctaaattagcccacctaaattgg 3799992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 138
Target Start/End: Complemental strand, 12587384 - 12587356
Alignment:
Q  110 gaagaagctaaattagcccacctaaattg 138  Q
    |||||||||||||||||||||||||||||    
T  12587384 gaagaagctaaattagcccacctaaattg 12587356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 15687115 - 15687083
Alignment:
Q  153 ataagctgaaaacaatatatggacatgtcataa 185  Q
    |||||||||||||||| ||||||||||||||||    
T  15687115 ataagctgaaaacaatttatggacatgtcataa 15687083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 139
Target Start/End: Complemental strand, 50901695 - 50901667
Alignment:
Q  111 aagaagctaaattagcccacctaaattgg 139  Q
    |||||||||||||||||||||||||||||    
T  50901695 aagaagctaaattagcccacctaaattgg 50901667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000003; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 25896842 - 25896914
Alignment:
Q  170 tatggacatgtcataaactttttctaaaagatcgcctaaacagtatcacaagtgtttatactggtagataaac 242  Q
    |||||||||||||||| || |||||| ||| || |||||||||| ||||||||| | || || ||||||||||    
T  25896842 tatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaac 25896914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 30024739 - 30024779
Alignment:
Q  145 ttatgaatataagctgaaaacaatatatggacatgtcataa 185  Q
    ||||||| |||||||||||||| ||||||||||||||||||    
T  30024739 ttatgaaaataagctgaaaacagtatatggacatgtcataa 30024779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 139
Target Start/End: Original strand, 12793872 - 12793901
Alignment:
Q  110 gaagaagctaaattagcccacctaaattgg 139  Q
    ||||||||||||||||||||||||||||||    
T  12793872 gaagaagctaaattagcccacctaaattgg 12793901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 4691881 - 4691921
Alignment:
Q  145 ttatgaatataagctgaaaacaatatatggacatgtcataa 185  Q
    ||||||| ||||||||||||||| |||||| ||||||||||    
T  4691881 ttatgaaaataagctgaaaacaacatatgggcatgtcataa 4691921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 138
Target Start/End: Original strand, 7949415 - 7949443
Alignment:
Q  110 gaagaagctaaattagcccacctaaattg 138  Q
    |||||||||||||||||||||||||||||    
T  7949415 gaagaagctaaattagcccacctaaattg 7949443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 139
Target Start/End: Complemental strand, 35818203 - 35818175
Alignment:
Q  111 aagaagctaaattagcccacctaaattgg 139  Q
    |||||||||||||||||||||||||||||    
T  35818203 aagaagctaaattagcccacctaaattgg 35818175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 138
Target Start/End: Original strand, 37720175 - 37720203
Alignment:
Q  110 gaagaagctaaattagcccacctaaattg 138  Q
    |||||||||||||||||||||||||||||    
T  37720175 gaagaagctaaattagcccacctaaattg 37720203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 138
Target Start/End: Original strand, 47386752 - 47386780
Alignment:
Q  110 gaagaagctaaattagcccacctaaattg 138  Q
    |||||||||||||||||||||||||||||    
T  47386752 gaagaagctaaattagcccacctaaattg 47386780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 139
Target Start/End: Original strand, 15284 - 15313
Alignment:
Q  110 gaagaagctaaattagcccacctaaattgg 139  Q
    ||||||||||||||||||||||||||||||    
T  15284 gaagaagctaaattagcccacctaaattgg 15313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 30; Significance: 0.0000002; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 139
Target Start/End: Complemental strand, 8485114 - 8485085
Alignment:
Q  110 gaagaagctaaattagcccacctaaattgg 139  Q
    ||||||||||||||||||||||||||||||    
T  8485114 gaagaagctaaattagcccacctaaattgg 8485085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 139
Target Start/End: Complemental strand, 968476 - 968448
Alignment:
Q  111 aagaagctaaattagcccacctaaattgg 139  Q
    |||||||||||||||||||||||||||||    
T  968476 aagaagctaaattagcccacctaaattgg 968448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 138
Target Start/End: Complemental strand, 7347952 - 7347924
Alignment:
Q  110 gaagaagctaaattagcccacctaaattg 138  Q
    |||||||||||||||||||||||||||||    
T  7347952 gaagaagctaaattagcccacctaaattg 7347924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 228
Target Start/End: Complemental strand, 11569491 - 11569411
Alignment:
Q  148 tgaatataagctgaaaacaatatatggacatgtcataaactttttctaaaagatcgcctaaacagtatcacaagtgtttat 228  Q
    |||| |||||||||||||||  |||| ||||||||||| || |||| | ||| || | |||||||| ||||||||| ||||    
T  11569491 tgaaaataagctgaaaacaacttatgtacatgtcataagctgtttccataagctctcttaaacagtctcacaagtggttat 11569411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 25869311 - 25869263
Alignment:
Q  137 tggagattttatgaatataagctgaaaacaatatatggacatgtcataa 185  Q
    |||||| |||||| | |||||||||||||||  ||||||||||||||||    
T  25869311 tggagagtttatggaaataagctgaaaacaacttatggacatgtcataa 25869263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 30; Significance: 0.0000002; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 139
Target Start/End: Complemental strand, 30579450 - 30579421
Alignment:
Q  110 gaagaagctaaattagcccacctaaattgg 139  Q
    ||||||||||||||||||||||||||||||    
T  30579450 gaagaagctaaattagcccacctaaattgg 30579421  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 139
Target Start/End: Complemental strand, 41487474 - 41487445
Alignment:
Q  110 gaagaagctaaattagcccacctaaattgg 139  Q
    ||||||||||||||||||||||||||||||    
T  41487474 gaagaagctaaattagcccacctaaattgg 41487445  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 139
Target Start/End: Original strand, 22932674 - 22932702
Alignment:
Q  111 aagaagctaaattagcccacctaaattgg 139  Q
    |||||||||||||||||||||||||||||    
T  22932674 aagaagctaaattagcccacctaaattgg 22932702  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 138
Target Start/End: Original strand, 41519226 - 41519254
Alignment:
Q  110 gaagaagctaaattagcccacctaaattg 138  Q
    |||||||||||||||||||||||||||||    
T  41519226 gaagaagctaaattagcccacctaaattg 41519254  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 139
Target Start/End: Complemental strand, 48772052 - 48772024
Alignment:
Q  111 aagaagctaaattagcccacctaaattgg 139  Q
    |||||||||||||||||||||||||||||    
T  48772052 aagaagctaaattagcccacctaaattgg 48772024  T

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Target: chr5 (Bit Score: 30; Significance: 0.0000002; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 139
Target Start/End: Complemental strand, 15486320 - 15486291
Alignment:
Q  110 gaagaagctaaattagcccacctaaattgg 139  Q
    ||||||||||||||||||||||||||||||    
T  15486320 gaagaagctaaattagcccacctaaattgg 15486291  T

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Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 139
Target Start/End: Complemental strand, 16773922 - 16773893
Alignment:
Q  110 gaagaagctaaattagcccacctaaattgg 139  Q
    ||||||||||||||||||||||||||||||    
T  16773922 gaagaagctaaattagcccacctaaattgg 16773893  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 139
Target Start/End: Original strand, 4793042 - 4793070
Alignment:
Q  111 aagaagctaaattagcccacctaaattgg 139  Q
    |||||||||||||||||||||||||||||    
T  4793042 aagaagctaaattagcccacctaaattgg 4793070  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 138
Target Start/End: Original strand, 17028225 - 17028253
Alignment:
Q  110 gaagaagctaaattagcccacctaaattg 138  Q
    |||||||||||||||||||||||||||||    
T  17028225 gaagaagctaaattagcccacctaaattg 17028253  T

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