View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18037_low_10 (Length: 383)

Name: NF18037_low_10
Description: NF18037
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18037_low_10
NF18037_low_10
[»] chr2 (43 HSPs)
chr2 (152-358)||(15505020-15505226)
chr2 (21-88)||(12599575-12599642)
chr2 (21-87)||(1071713-1071779)
chr2 (26-88)||(740525-740587)
chr2 (26-75)||(29754597-29754646)
chr2 (22-75)||(33201292-33201345)
chr2 (20-75)||(11694145-11694200)
chr2 (21-74)||(34244299-34244352)
chr2 (25-57)||(15502261-15502293)
chr2 (21-57)||(18612390-18612426)
chr2 (26-74)||(29750308-29750356)
chr2 (23-75)||(38558159-38558211)
chr2 (21-57)||(40859871-40859907)
chr2 (21-57)||(45474247-45474283)
chr2 (21-88)||(9546045-9546112)
chr2 (20-75)||(11681570-11681625)
chr2 (24-75)||(20170521-20170572)
chr2 (21-75)||(38502301-38502356)
chr2 (21-59)||(3599872-3599910)
chr2 (21-59)||(37522478-37522516)
chr2 (310-344)||(40286880-40286914)
chr2 (306-344)||(44530716-44530754)
chr2 (26-75)||(741224-741273)
chr2 (20-57)||(5165919-5165956)
chr2 (20-57)||(7274503-7274540)
chr2 (21-74)||(10643652-10643705)
chr2 (20-57)||(11719516-11719553)
chr2 (22-59)||(22077942-22077979)
chr2 (20-57)||(24926469-24926506)
chr2 (21-57)||(1117813-1117849)
chr2 (21-57)||(3079503-3079539)
chr2 (21-57)||(4631040-4631076)
chr2 (21-57)||(13552155-13552191)
chr2 (308-348)||(14891108-14891148)
chr2 (21-57)||(32292195-32292231)
chr2 (30-78)||(32500845-32500893)
chr2 (21-57)||(34912438-34912474)
chr2 (21-57)||(35423573-35423609)
chr2 (21-57)||(35468779-35468815)
chr2 (308-340)||(36816454-36816486)
chr2 (21-57)||(38709492-38709528)
chr2 (21-57)||(40202016-40202052)
chr2 (21-57)||(41452619-41452655)
[»] chr1 (30 HSPs)
chr1 (21-88)||(38821778-38821845)
chr1 (20-73)||(36564166-36564219)
chr1 (21-77)||(44041042-44041098)
chr1 (21-75)||(33218480-33218534)
chr1 (21-56)||(12294538-12294573)
chr1 (21-88)||(27322846-27322913)
chr1 (21-71)||(10427565-10427615)
chr1 (308-345)||(52261340-52261377)
chr1 (304-340)||(39757177-39757213)
chr1 (304-340)||(39762531-39762567)
chr1 (21-56)||(8723221-8723256)
chr1 (21-56)||(11606877-11606912)
chr1 (303-342)||(19055434-19055473)
chr1 (21-56)||(19270585-19270620)
chr1 (21-87)||(4672490-4672556)
chr1 (21-59)||(17366600-17366638)
chr1 (21-87)||(37033989-37034055)
chr1 (35-85)||(41103528-41103578)
chr1 (21-59)||(49570989-49571027)
chr1 (22-59)||(1322772-1322809)
chr1 (20-57)||(38799911-38799948)
chr1 (21-57)||(7308705-7308741)
chr1 (21-57)||(8937394-8937430)
chr1 (21-57)||(17248720-17248756)
chr1 (21-57)||(31638785-31638821)
chr1 (21-57)||(34078068-34078104)
chr1 (20-76)||(34546997-34547053)
chr1 (21-57)||(39879390-39879426)
chr1 (21-57)||(44065609-44065645)
chr1 (21-57)||(46040817-46040853)
[»] chr4 (49 HSPs)
chr4 (21-84)||(46250820-46250883)
chr4 (22-75)||(5105636-5105689)
chr4 (21-86)||(43028204-43028269)
chr4 (21-75)||(37442798-37442852)
chr4 (21-79)||(47683500-47683558)
chr4 (21-59)||(51187446-51187484)
chr4 (304-346)||(52846247-52846289)
chr4 (308-340)||(2325529-2325561)
chr4 (308-344)||(44626606-44626642)
chr4 (21-57)||(54484223-54484259)
chr4 (24-79)||(23067384-23067438)
chr4 (21-88)||(24916073-24916140)
chr4 (21-88)||(55109928-55109995)
chr4 (21-59)||(4608656-4608694)
chr4 (21-59)||(18138119-18138157)
chr4 (21-59)||(28361746-28361784)
chr4 (304-358)||(29974336-29974390)
chr4 (21-87)||(43096943-43097009)
chr4 (308-346)||(45764420-45764458)
chr4 (21-59)||(49125328-49125366)
chr4 (21-59)||(52620420-52620458)
chr4 (25-75)||(54485828-54485878)
chr4 (20-57)||(3240063-3240100)
chr4 (22-59)||(20680981-20681018)
chr4 (20-57)||(24157508-24157545)
chr4 (21-74)||(28588319-28588372)
chr4 (307-356)||(32464626-32464675)
chr4 (20-57)||(42906429-42906466)
chr4 (20-57)||(45019562-45019599)
chr4 (21-57)||(6391648-6391684)
chr4 (21-57)||(8150989-8151025)
chr4 (21-57)||(9575264-9575300)
chr4 (21-57)||(11180692-11180728)
chr4 (22-66)||(12294674-12294718)
chr4 (21-57)||(17976232-17976268)
chr4 (21-57)||(25881798-25881834)
chr4 (21-57)||(26067303-26067339)
chr4 (21-57)||(26097904-26097940)
chr4 (33-77)||(35519464-35519508)
chr4 (21-57)||(38490848-38490884)
chr4 (308-344)||(39449174-39449210)
chr4 (21-57)||(39651520-39651556)
chr4 (21-57)||(39657498-39657534)
chr4 (21-57)||(40951840-40951876)
chr4 (21-57)||(41105385-41105421)
chr4 (21-57)||(41144793-41144829)
chr4 (21-57)||(43117300-43117336)
chr4 (21-53)||(48458488-48458520)
chr4 (21-57)||(51153268-51153304)
[»] scaffold0047 (1 HSPs)
scaffold0047 (22-88)||(65606-65672)
[»] chr8 (48 HSPs)
chr8 (21-75)||(9007443-9007496)
chr8 (21-86)||(39199312-39199376)
chr8 (21-57)||(11420398-11420434)
chr8 (21-88)||(6629207-6629274)
chr8 (21-75)||(3501352-3501406)
chr8 (21-59)||(11578975-11579013)
chr8 (21-74)||(10867225-10867278)
chr8 (23-88)||(34142875-34142940)
chr8 (21-57)||(24314155-24314191)
chr8 (21-57)||(45521547-45521583)
chr8 (21-75)||(3541263-3541317)
chr8 (21-59)||(6746941-6746979)
chr8 (302-344)||(7375813-7375855)
chr8 (21-59)||(27748264-27748302)
chr8 (21-59)||(31261280-31261318)
chr8 (21-59)||(33848942-33848980)
chr8 (306-340)||(40074856-40074890)
chr8 (25-79)||(42328618-42328672)
chr8 (21-87)||(45413891-45413956)
chr8 (21-74)||(2442299-2442352)
chr8 (21-74)||(15172362-15172415)
chr8 (20-57)||(16844665-16844702)
chr8 (20-57)||(17046394-17046431)
chr8 (21-74)||(17950045-17950098)
chr8 (20-57)||(27467041-27467078)
chr8 (20-57)||(34805119-34805156)
chr8 (22-59)||(35916802-35916839)
chr8 (20-57)||(43818686-43818723)
chr8 (308-340)||(4312549-4312581)
chr8 (23-59)||(4438643-4438679)
chr8 (22-74)||(11876389-11876441)
chr8 (22-74)||(11891396-11891448)
chr8 (21-57)||(14449855-14449891)
chr8 (308-344)||(14531622-14531658)
chr8 (21-57)||(27877397-27877433)
chr8 (21-57)||(27914372-27914408)
chr8 (21-57)||(27960791-27960827)
chr8 (21-57)||(28017578-28017614)
chr8 (22-58)||(29862667-29862703)
chr8 (308-344)||(33605112-33605148)
chr8 (21-57)||(38137971-38138007)
chr8 (21-57)||(38909071-38909107)
chr8 (21-57)||(39486282-39486318)
chr8 (21-57)||(40048923-40048959)
chr8 (21-57)||(41526099-41526135)
chr8 (308-344)||(42012624-42012660)
chr8 (21-57)||(44654736-44654772)
chr8 (21-57)||(44908327-44908363)
[»] chr7 (39 HSPs)
chr7 (21-88)||(28069589-28069656)
chr7 (21-75)||(10039916-10039970)
chr7 (21-79)||(24862514-24862572)
chr7 (21-57)||(24650027-24650063)
chr7 (23-74)||(6547725-6547776)
chr7 (23-85)||(6112267-6112329)
chr7 (21-75)||(7814200-7814254)
chr7 (21-75)||(38237444-38237498)
chr7 (21-86)||(4094246-4094311)
chr7 (22-54)||(1441595-1441627)
chr7 (21-57)||(4406882-4406918)
chr7 (310-350)||(10945025-10945065)
chr7 (23-75)||(19062913-19062965)
chr7 (21-85)||(47439709-47439773)
chr7 (21-88)||(13141791-13141857)
chr7 (20-59)||(32961203-32961242)
chr7 (21-55)||(17816123-17816157)
chr7 (21-55)||(19050833-19050867)
chr7 (21-59)||(23154424-23154462)
chr7 (21-87)||(24060491-24060557)
chr7 (21-79)||(24875371-24875429)
chr7 (31-85)||(28737256-28737310)
chr7 (21-75)||(47293529-47293583)
chr7 (22-59)||(4492687-4492724)
chr7 (20-57)||(18956981-18957018)
chr7 (20-57)||(29449423-29449460)
chr7 (20-57)||(40240620-40240657)
chr7 (20-57)||(40788832-40788869)
chr7 (20-57)||(43110819-43110856)
chr7 (21-57)||(5483189-5483225)
chr7 (308-340)||(8241074-8241106)
chr7 (22-66)||(11373208-11373252)
chr7 (22-74)||(13703363-13703415)
chr7 (21-57)||(22711499-22711535)
chr7 (21-57)||(35910062-35910098)
chr7 (21-57)||(40036272-40036308)
chr7 (21-57)||(41343573-41343609)
chr7 (21-53)||(44652130-44652162)
chr7 (21-57)||(47840516-47840552)
[»] scaffold0018 (1 HSPs)
scaffold0018 (21-59)||(36497-36535)
[»] chr5 (37 HSPs)
chr5 (21-75)||(1135186-1135240)
chr5 (21-75)||(14000776-14000830)
chr5 (26-88)||(14052163-14052225)
chr5 (22-75)||(29632766-29632819)
chr5 (17-69)||(31312422-31312474)
chr5 (26-88)||(5856355-5856417)
chr5 (24-74)||(9051071-9051121)
chr5 (21-75)||(31378217-31378271)
chr5 (21-57)||(23085319-23085355)
chr5 (21-88)||(29663456-29663521)
chr5 (21-57)||(41863265-41863301)
chr5 (21-88)||(33761346-33761413)
chr5 (25-59)||(1140313-1140347)
chr5 (21-75)||(4353017-4353071)
chr5 (21-59)||(16166528-16166566)
chr5 (21-71)||(36194213-36194263)
chr5 (311-345)||(38890418-38890452)
chr5 (21-75)||(39937967-39938021)
chr5 (21-77)||(40715855-40715908)
chr5 (21-79)||(42170013-42170071)
chr5 (20-57)||(5589851-5589888)
chr5 (20-57)||(16051158-16051195)
chr5 (20-57)||(25820339-25820376)
chr5 (20-57)||(31885048-31885085)
chr5 (20-85)||(38632243-38632308)
chr5 (21-57)||(789265-789301)
chr5 (21-57)||(2529867-2529903)
chr5 (21-57)||(17822396-17822432)
chr5 (21-57)||(18282771-18282807)
chr5 (21-57)||(19361435-19361471)
chr5 (21-57)||(19518741-19518777)
chr5 (22-66)||(28479623-28479667)
chr5 (21-57)||(28746572-28746608)
chr5 (21-49)||(40293068-40293096)
chr5 (21-53)||(42112063-42112095)
chr5 (21-57)||(42416489-42416525)
chr5 (26-78)||(43222364-43222416)
[»] chr3 (29 HSPs)
chr3 (21-75)||(51283725-51283779)
chr3 (20-57)||(26410480-26410517)
chr3 (20-57)||(45599651-45599688)
chr3 (21-57)||(34996038-34996074)
chr3 (20-59)||(46089288-46089327)
chr3 (21-72)||(47410970-47411021)
chr3 (21-72)||(47411106-47411157)
chr3 (21-55)||(5239408-5239442)
chr3 (21-79)||(8231642-8231700)
chr3 (25-75)||(16738285-16738335)
chr3 (21-55)||(23344656-23344690)
chr3 (306-340)||(47392466-47392500)
chr3 (23-57)||(47410465-47410499)
chr3 (21-71)||(50585794-50585844)
chr3 (20-57)||(7040211-7040248)
chr3 (20-57)||(36592600-36592637)
chr3 (20-57)||(52460661-52460698)
chr3 (21-57)||(13336887-13336923)
chr3 (21-57)||(15496719-15496755)
chr3 (308-344)||(26645027-26645063)
chr3 (21-57)||(27371268-27371304)
chr3 (21-57)||(30333890-30333926)
chr3 (21-57)||(44540546-44540582)
chr3 (21-57)||(44762978-44763014)
chr3 (21-57)||(46090370-46090406)
chr3 (21-57)||(46851206-46851242)
chr3 (21-57)||(47670736-47670772)
chr3 (21-57)||(54113134-54113170)
chr3 (21-57)||(54203995-54204031)
[»] chr6 (16 HSPs)
chr6 (21-57)||(8866846-8866882)
chr6 (21-88)||(3842035-3842102)
chr6 (308-344)||(10053192-10053228)
chr6 (20-87)||(32279533-32279600)
chr6 (20-57)||(3849878-3849915)
chr6 (21-58)||(9155430-9155467)
chr6 (21-57)||(6018826-6018862)
chr6 (21-57)||(7540892-7540928)
chr6 (21-57)||(8872532-8872568)
chr6 (24-56)||(17293956-17293988)
chr6 (21-57)||(17505273-17505309)
chr6 (21-57)||(28471531-28471567)
chr6 (21-57)||(29042990-29043026)
chr6 (21-57)||(29976100-29976136)
chr6 (304-344)||(32621798-32621838)
chr6 (21-57)||(34207255-34207291)
[»] scaffold0221 (1 HSPs)
scaffold0221 (25-88)||(10644-10707)
[»] scaffold0257 (1 HSPs)
scaffold0257 (303-344)||(23977-24018)
[»] scaffold0318 (1 HSPs)
scaffold0318 (21-57)||(545-581)
[»] scaffold0160 (1 HSPs)
scaffold0160 (308-344)||(26422-26458)
[»] scaffold0027 (1 HSPs)
scaffold0027 (21-57)||(138209-138245)
[»] scaffold0003 (1 HSPs)
scaffold0003 (21-57)||(228532-228568)


Alignment Details
Target: chr2 (Bit Score: 155; Significance: 3e-82; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 152 - 358
Target Start/End: Original strand, 15505020 - 15505226
Alignment:
Q  152 catagaagttattgttcgtaatttacacgtgtcaacacattaaaaaatatataaacaaacattgtgtcagtcaaccgttagtaaaaataataatactact 251  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||| |||||||| ||| ||| |||||||||||||||||||||||||||||||||    
T  15505020 cataaaagttattgttcgtaatttacatgtgtcaacacaataaaaaatagataaacaagcatcgtgccagtcaaccgttagtaaaaataataatactact 15505119  T
Q  252 aataaaacaatgaaagccgacttctcattcaaccaattgaacacaccaaattaaaaagaaatgatatttaaacaactattttatgataactttctttttc 351  Q
    |||||||||||||||| |||||||| ||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  15505120 aataaaacaatgaaagtcgacttctgattcaaccagttgaacacactaaattaaaaagaaatgatatttgaacaactattttatgataactttctttctc 15505219  T
Q  352 ttactca 358  Q
    |||||||    
T  15505220 ttactca 15505226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 12599575 - 12599642
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagtg 88  Q
    ||||||||||||||||||| ||||||| ||||||||| | ||||||||||| ||||||| ||||||||    
T  12599575 atattatatttgttatattattggtataattgaaaaagataaatataatttattataatataaaagtg 12599642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 1071713 - 1071779
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagt 87  Q
    |||||||||||||||||||||| || ||||||||||||| ||| || |||||||| |||||||||||    
T  1071713 atattatatttgttatattgttagtgtcattgaaaaatataaacatgatttgttacaatttaaaagt 1071779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 740587 - 740525
Alignment:
Q  26 atatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagtg 88  Q
    |||||||||||||||||||||||||||||||| | || |||| ||||||| ||| ||||||||    
T  740587 atatttgttatattgttggtatcattgaaaaagataagtatagtttgttacaatataaaagtg 740525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 29754646 - 29754597
Alignment:
Q  26 atatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    |||||||||||||||||||||||||||||||| | || ||||||||||||    
T  29754646 atatttgttatattgttggtatcattgaaaaagataagtataatttgtta 29754597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 33201292 - 33201345
Alignment:
Q  22 tattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    |||||||||||||||||||||||||||||| ||||||| || |||| |||||||    
T  33201292 tattatatttgttatattgttggtatcatttaaaaatataattatagtttgtta 33201345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 11694200 - 11694145
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    |||||||||||||||||||||||||||||||| ||||| | ||  |||||||||||    
T  11694200 aatattatatttgttatattgttggtatcattaaaaaaaataatcataatttgtta 11694145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 34244299 - 34244352
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtt 74  Q
    ||||||||||| |||||||||||||||| |||||||| | || |||||||||||    
T  34244299 atattatatttattatattgttggtatcgttgaaaaagataagtataatttgtt 34244352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 15502293 - 15502261
Alignment:
Q  25 tatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||||||||||||||||||||    
T  15502293 tatatttgttatattgttggtatcattgaaaaa 15502261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 18612426 - 18612390
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||||||||||||| |||||||||||    
T  18612426 atattatatttgttatattgttggtgtcattgaaaaa 18612390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 29750356 - 29750308
Alignment:
Q  26 atatttgttatattgttggtatcattgaaaaatagaaatataatttgtt 74  Q
    |||||||||||||||||||||||||||||||| | || |||| ||||||    
T  29750356 atatttgttatattgttggtatcattgaaaaagataagtatagtttgtt 29750308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 38558159 - 38558211
Alignment:
Q  23 attatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    ||||||||||||||||||||| ||||||| ||||| | ||||||| |||||||    
T  38558159 attatatttgttatattgttgatatcattaaaaaagataaatatagtttgtta 38558211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 40859871 - 40859907
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||| |||||||||||||||||||||||    
T  40859871 atattatatttgtaatattgttggtatcattgaaaaa 40859907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 45474283 - 45474247
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| |||||||||||||||||||||    
T  45474283 atattatatttgttacattgttggtatcattgaaaaa 45474247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 9546112 - 9546045
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagtg 88  Q
    ||||||||||||||||||||||||||||||  ||||| | ||  ||||||||||| ||| | ||||||    
T  9546112 atattatatttgttatattgttggtatcatccaaaaagataagaataatttgttacaatatgaaagtg 9546045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 11681625 - 11681570
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    ||||||||||||||||||||||| |||||||| ||||| | ||  |||||||||||    
T  11681625 aatattatatttgttatattgtttgtatcattaaaaaaaataatcataatttgtta 11681570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 20170572 - 20170521
Alignment:
Q  24 ttatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    |||||||||||||||| ||| ||||||||||||| | || ||||||||||||    
T  20170572 ttatatttgttatattattgatatcattgaaaaagataagtataatttgtta 20170521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 38502301 - 38502356
Alignment:
Q  21 atattatattt-gttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    ||||||||||| |||||||||||||||||||||||||| | || |||| |||||||    
T  38502301 atattatattttgttatattgttggtatcattgaaaaagataagtatagtttgtta 38502356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 3599910 - 3599872
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaata 59  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  3599910 atattatatttgttatattattgatatcattgaaaaata 3599872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 37522516 - 37522478
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaata 59  Q
    |||||||||||||||||||||| || |||||||||||||    
T  37522516 atattatatttgttatattgtttgtgtcattgaaaaata 37522478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 344
Target Start/End: Complemental strand, 40286914 - 40286880
Alignment:
Q  310 aaatgatatttaaacaactattttatgataacttt 344  Q
    |||||||||||||| ||||||||||||||||||||    
T  40286914 aaatgatatttaaagaactattttatgataacttt 40286880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 344
Target Start/End: Complemental strand, 44530754 - 44530716
Alignment:
Q  306 aaagaaatgatatttaaacaactattttatgataacttt 344  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  44530754 aaagaaatgatatttgaacaattattttatgataacttt 44530716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 741273 - 741224
Alignment:
Q  26 atatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    |||||| ||||||||||||||||||||||||| | || |||| |||||||    
T  741273 atatttcttatattgttggtatcattgaaaaaaataagtatagtttgtta 741224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 5165956 - 5165919
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  5165956 aatattatatttgttacattgttggtgtcattgaaaaa 5165919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 7274540 - 7274503
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  7274540 aatattatatttgttacattgttggtgtcattgaaaaa 7274503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 10643652 - 10643705
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtt 74  Q
    ||||||||||| |||||||||||||||| |||||||| | ||| ||| ||||||    
T  10643652 atattatatttattatattgttggtatcgttgaaaaaaataaacatagtttgtt 10643705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 11719516 - 11719553
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  11719516 aatattatatttgttatattgttagtatcattaaaaaa 11719553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 22077979 - 22077942
Alignment:
Q  22 tattatatttgttatattgttggtatcattgaaaaata 59  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  22077979 tattatatttgttacattgttgatatcattgaaaaata 22077942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 24926469 - 24926506
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  24926469 aatattatatttgttacattgttggtgtcattgaaaaa 24926506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 1117849 - 1117813
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  1117849 atattatatttgttacattgttggtgtcattgaaaaa 1117813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 3079539 - 3079503
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  3079539 atattatatttgttacattgttggtgtcattgaaaaa 3079503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 4631076 - 4631040
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  4631076 atattatatttgttacattgttggtgtcattgaaaaa 4631040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 13552155 - 13552191
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  13552155 atattatatttgttacattgttggtgtcattgaaaaa 13552191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 14891148 - 14891108
Alignment:
Q  308 agaaatgatatttaaacaactattttatgataactttcttt 348  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  14891148 agaaatgatatttgtacaactattttgtgataactttcttt 14891108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 32292231 - 32292195
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  32292231 atattatatttgttacattgttggtgtcattgaaaaa 32292195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 32500845 - 32500893
Alignment:
Q  30 ttgttatattgttggtatcattgaaaaatagaaatataatttgttataa 78  Q
    |||||||||||||  ||| ||||||||||| ||||||||||| ||||||    
T  32500845 ttgttatattgttaatattattgaaaaatataaatataatttattataa 32500893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 34912474 - 34912438
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  34912474 atattatatttgttacattgttggtgtcattgaaaaa 34912438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 35423609 - 35423573
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  35423609 atattatatttgttacattgttggtgtcattgaaaaa 35423573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 35468779 - 35468815
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  35468779 atattatatttattatattgttgatatcattgaaaaa 35468815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 340
Target Start/End: Complemental strand, 36816486 - 36816454
Alignment:
Q  308 agaaatgatatttaaacaactattttatgataa 340  Q
    |||||||||||||| ||||||||||||||||||    
T  36816486 agaaatgatatttatacaactattttatgataa 36816454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 38709528 - 38709492
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  38709528 atattatatttgttacattgttggtgtcattgaaaaa 38709492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 40202052 - 40202016
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  40202052 atattatatttgttacattgttggtgtcattgaaaaa 40202016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 41452655 - 41452619
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  41452655 atattatatttgttacattgttggtgtcattgaaaaa 41452619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 38821845 - 38821778
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagtg 88  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||| ||||||    
T  38821845 atattatatttgttatactgttggtatcattgaaaaatagaagtataatttgttacaatttgaaagtg 38821778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 36564166 - 36564219
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaatagaaatataatttgt 73  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||| |||||    
T  36564166 aatattatatttgttatattgttggtatcatcgaaaaatataaatatagtttgt 36564219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 44041042 - 44041098
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttata 77  Q
    ||||||||||||||||||||||||||||||||||||| | || |||| |||||||||    
T  44041042 atattatatttgttatattgttggtatcattgaaaaaaataagtatattttgttata 44041098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 33218480 - 33218534
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    |||||||||||||| |||||||||||||||||||||| | || ||||||||||||    
T  33218480 atattatatttgttgtattgttggtatcattgaaaaagataagtataatttgtta 33218534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 12294538 - 12294573
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaa 56  Q
    ||||||||||||||||||||||||||||||||||||    
T  12294538 atattatatttgttatattgttggtatcattgaaaa 12294573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 27322846 - 27322913
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagtg 88  Q
    ||||||||||||||||||| |  |||||||||||||||| || |||| ||||||||||| | ||||||    
T  27322846 atattatatttgttatattttctgtatcattgaaaaatataagtatagtttgttataatattaaagtg 27322913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 10427565 - 10427615
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataattt 71  Q
    ||||||||||||||||||||||| ||||||||||||| | || ||||||||    
T  10427565 atattatatttgttatattgttgatatcattgaaaaaaataagtataattt 10427615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 345
Target Start/End: Original strand, 52261340 - 52261377
Alignment:
Q  308 agaaatgatatttaaacaactattttatgataactttc 345  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  52261340 agaaatgatatttgaacaactattttatgataactttc 52261377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 340
Target Start/End: Original strand, 39757177 - 39757213
Alignment:
Q  304 aaaaagaaatgatatttaaacaactattttatgataa 340  Q
    ||||||||||||||||| |||||||||||||||||||    
T  39757177 aaaaagaaatgatatttgaacaactattttatgataa 39757213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 340
Target Start/End: Original strand, 39762531 - 39762567
Alignment:
Q  304 aaaaagaaatgatatttaaacaactattttatgataa 340  Q
    ||||||||||||||||| |||||||||||||||||||    
T  39762531 aaaaagaaatgatatttgaacaactattttatgataa 39762567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 8723256 - 8723221
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaa 56  Q
    |||||||| |||||||||||||||||||||||||||    
T  8723256 atattataattgttatattgttggtatcattgaaaa 8723221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 11606877 - 11606912
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaa 56  Q
    ||||||||||||||| ||||||||||||||||||||    
T  11606877 atattatatttgttacattgttggtatcattgaaaa 11606912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 303 - 342
Target Start/End: Original strand, 19055434 - 19055473
Alignment:
Q  303 taaaaagaaatgatatttaaacaactattttatgataact 342  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  19055434 taaagagaaatgatatttaaacaactattttttgataact 19055473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 19270620 - 19270585
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaa 56  Q
    ||||||||||| ||||||||||||||||||||||||    
T  19270620 atattatatttattatattgttggtatcattgaaaa 19270585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 4672556 - 4672490
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagt 87  Q
    ||||||||| |||||||||| |||| |||||||| || | || ||| ||||||| ||||||||||||    
T  4672556 atattatatgtgttatattggtggtgtcattgaataaaataagtatgatttgttgtaatttaaaagt 4672490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 17366600 - 17366638
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaata 59  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  17366600 atattatatttgttacattgttggtgtcattgaaaaata 17366638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 37033989 - 37034055
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagt 87  Q
    ||||| |||||| |||||| || || ||||||||||||| || ||| |||||||||||||| |||||    
T  37033989 atattttatttgatatattatttgtgtcattgaaaaatataagtatgatttgttataatttgaaagt 37034055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 41103528 - 41103578
Alignment:
Q  35 atattgttggtatcattgaaaaatagaaatataatttgttataatttaaaa 85  Q
    ||||||||||||||||||||||| | | ||||||||||||| ||| |||||    
T  41103528 atattgttggtatcattgaaaaaaatagatataatttgttacaatataaaa 41103578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 49571027 - 49570989
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaata 59  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  49571027 atattatatttgttacattgttggtgtcattgaaaaata 49570989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 1322772 - 1322809
Alignment:
Q  22 tattatatttgttatattgttggtatcattgaaaaata 59  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  1322772 tattatatttgttacattgttggtgtcattgaaaaata 1322809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 38799948 - 38799911
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  38799948 aatattatatttgttacattgttggtgtcattgaaaaa 38799911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 7308705 - 7308741
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  7308705 atattatatttgttacattgttggtgtcattgaaaaa 7308741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 8937394 - 8937430
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  8937394 atattatatttattatattgttggtgtcattgaaaaa 8937430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 17248756 - 17248720
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  17248756 atattatatttgttacattgttggtgtcattgaaaaa 17248720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 31638785 - 31638821
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  31638785 atattatatttgttacattgttggtgtcattgaaaaa 31638821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 34078104 - 34078068
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  34078104 atattatatttgttacattgttggtgtcattgaaaaa 34078068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 34546997 - 34547053
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttat 76  Q
    |||||||||||||||||| | ||| ||| ||||||||| | || |||||||||||||    
T  34546997 aatattatatttgttatactattgatattattgaaaaaaataagtataatttgttat 34547053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 39879390 - 39879426
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  39879390 atattatatttgttacattgttggtgtcattgaaaaa 39879426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 44065609 - 44065645
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  44065609 atattatatttgttacattgttggtgtcattgaaaaa 44065645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 46040817 - 46040853
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  46040817 atattatatttgttacattgttggtgtcattgaaaaa 46040853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 6e-16; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 46250883 - 46250820
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaa 84  Q
    ||||||||||||||||||||||||||||||||||||| | || |||||||||||| ||| ||||    
T  46250883 atattatatttgttatattgttggtatcattgaaaaagataagtataatttgttacaatataaa 46250820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 5105689 - 5105636
Alignment:
Q  22 tattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    |||||||||||||||||||||||||||||||||||| | ||||||  |||||||    
T  5105689 tattatatttgttatattgttggtatcattgaaaaagataaatatggtttgtta 5105636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 43028269 - 43028204
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaag 86  Q
    ||||| ||||||||| |||||| |||||||||||||| | ||||||| ||||||||||| ||||||    
T  43028269 atattgtatttgttacattgttagtatcattgaaaaagataaatatagtttgttataatataaaag 43028204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 37442852 - 37442798
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    ||||||||||||||||||| ||||||| ||||||||| | ||||||| |||||||    
T  37442852 atattatatttgttatattcttggtataattgaaaaagataaatatagtttgtta 37442798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 47683500 - 47683558
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataat 79  Q
    ||||||||||||||||||| ||| | || |||||||||| ||||||| |||||||||||    
T  47683500 atattatatttgttatattattgatgtcgttgaaaaatataaatatagtttgttataat 47683558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 51187484 - 51187446
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaata 59  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  51187484 atattatatttgttatattgttggtgtcattgaaaaata 51187446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 346
Target Start/End: Complemental strand, 52846289 - 52846247
Alignment:
Q  304 aaaaagaaatgatatttaaacaactattttatgataactttct 346  Q
    |||||||||||||||||||||| ||||||||||| ||||||||    
T  52846289 aaaaagaaatgatatttaaacatctattttatgacaactttct 52846247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 340
Target Start/End: Complemental strand, 2325561 - 2325529
Alignment:
Q  308 agaaatgatatttaaacaactattttatgataa 340  Q
    |||||||||||||||||||||||||||||||||    
T  2325561 agaaatgatatttaaacaactattttatgataa 2325529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 44626606 - 44626642
Alignment:
Q  308 agaaatgatatttaaacaactattttatgataacttt 344  Q
    ||||||||||||| |||||||||||||||||||||||    
T  44626606 agaaatgatatttgaacaactattttatgataacttt 44626642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 54484223 - 54484259
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||||||||||||||||| ||||||    
T  54484223 atattatatttgttatattgttggtatcatcgaaaaa 54484259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 23067384 - 23067438
Alignment:
Q  24 ttatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataat 79  Q
    ||||||||||||| ||||||||||||||||| || | || ||||||||||||||||    
T  23067384 ttatatttgttat-ttgttggtatcattgaataagataagtataatttgttataat 23067438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 24916073 - 24916140
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagtg 88  Q
    ||||||||||||||||||| ||| | | ||||||||| | || |||||||||||| ||| ||||||||    
T  24916073 atattatatttgttatattattgttgttattgaaaaagataagtataatttgttacaatataaaagtg 24916140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 55109928 - 55109995
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagtg 88  Q
    ||||||||||| ||||||| ||| | ||||| ||||| | ||| || |||||||||||||||||||||    
T  55109928 atattatatttattatattattgatgtcattaaaaaagaaaaacatgatttgttataatttaaaagtg 55109995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 4608694 - 4608656
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaata 59  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  4608694 atattatatttgttatattgttggtgtcatttaaaaata 4608656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 18138157 - 18138119
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaata 59  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  18138157 atattatatttgttacattgttggtgtcattgaaaaata 18138119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 28361746 - 28361784
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaata 59  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  28361746 atattatatttgttacattgttggtgtcattgaaaaata 28361784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 358
Target Start/End: Complemental strand, 29974390 - 29974336
Alignment:
Q  304 aaaaagaaatgatatttaaacaactattttatgataactttctttttcttactca 358  Q
    ||||| ||||||||||| |||||||||||| ||| |||||||| |||| ||||||    
T  29974390 aaaaaaaaatgatatttgaacaactattttgtgacaactttctctttcatactca 29974336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 43097009 - 43096943
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagt 87  Q
    |||||||||||||||||||||  || ||||||||||  | ||| || |||||||||||||| |||||    
T  43097009 atattatatttgttatattgtaagtgtcattgaaaaggataaacatgatttgttataattttaaagt 43096943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 346
Target Start/End: Complemental strand, 45764458 - 45764420
Alignment:
Q  308 agaaatgatatttaaacaactattttatgataactttct 346  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  45764458 agaaatgatatttatacaactattttatgacaactttct 45764420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 49125366 - 49125328
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaata 59  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  49125366 atattatatttgttacattgttggtgtcattgaaaaata 49125328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 52620458 - 52620420
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaata 59  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  52620458 atattatatttgttacattgttggtgtcattgaaaaata 52620420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 54485828 - 54485878
Alignment:
Q  25 tatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    |||||||||||||||||||||||||| |||||| |||| || | |||||||    
T  54485828 tatatttgttatattgttggtatcatcgaaaaagagaagtacagtttgtta 54485878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 3240100 - 3240063
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  3240100 aatattatatttgttacattgttggtgtcattgaaaaa 3240063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 20681018 - 20680981
Alignment:
Q  22 tattatatttgttatattgttggtatcattgaaaaata 59  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  20681018 tattatatttgttacattgttggtgtcattgaaaaata 20680981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 24157545 - 24157508
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  24157545 aatattatatttgttatattgtttgcatcattgaaaaa 24157508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 28588372 - 28588319
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtt 74  Q
    |||||||| |||||||||||||||||||||| | ||||| |||| || ||||||    
T  28588372 atattatagttgttatattgttggtatcattaagaaatataaatgtagtttgtt 28588319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 32464675 - 32464626
Alignment:
Q  307 aagaaatgatatttaaacaactattttatgataactttctttttcttact 356  Q
    ||||||||||||||  |||||||||||||||||| ||||| |||| ||||    
T  32464675 aagaaatgatatttgtacaactattttatgataattttctctttcatact 32464626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 42906466 - 42906429
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  42906466 aatactatatttgttatattgttggtgtcattgaaaaa 42906429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 45019562 - 45019599
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  45019562 aatattatatttgttacattgttggtgtcattgaaaaa 45019599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 6391684 - 6391648
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  6391684 atattatatttgttatattgttgttatcattaaaaaa 6391648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 8151025 - 8150989
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  8151025 atattatatttgttacattgttggtgtcattgaaaaa 8150989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 9575264 - 9575300
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| |||||||||| |||||||||    
T  9575264 atattatatttgttatgttgttggtatgattgaaaaa 9575300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 11180728 - 11180692
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  11180728 atattatatttgttacattgttggtgtcattgaaaaa 11180692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 12294674 - 12294718
Alignment:
Q  22 tattatatttgttatattgttggtatcattgaaaaatagaaatat 66  Q
    |||||||||||||||||| ||| | ||||||||||||| ||||||    
T  12294674 tattatatttgttatattattgttctcattgaaaaatataaatat 12294718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 17976268 - 17976232
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  17976268 atattatatttgttacattgttggtgtcattgaaaaa 17976232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 25881834 - 25881798
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  25881834 atattatatttgttacattgttggtgtcattgaaaaa 25881798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 26067303 - 26067339
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||||| |||||| |||||||||||    
T  26067303 atattatatttgttatatcgttggtgtcattgaaaaa 26067339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 26097904 - 26097940
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  26097904 atattatatttgttacattgttggtgtcattgaaaaa 26097940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 35519464 - 35519508
Alignment:
Q  33 ttatattgttggtatcattgaaaaatagaaatataatttgttata 77  Q
    ||||||||||||||||||||||||| | || |||| |||||||||    
T  35519464 ttatattgttggtatcattgaaaaagataagtatagtttgttata 35519508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 38490884 - 38490848
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  38490884 atattatatttgttatattgtttgtaacattgaaaaa 38490848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 39449174 - 39449210
Alignment:
Q  308 agaaatgatatttaaacaactattttatgataacttt 344  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  39449174 agaaatgatatttatacaactattttgtgataacttt 39449210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 39651556 - 39651520
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  39651556 atattatatttgttacattgttggtgtcattgaaaaa 39651520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 39657534 - 39657498
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  39657534 atattatatttgttacattgttggtgtcattgaaaaa 39657498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 40951876 - 40951840
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  40951876 atattatatttgttacattgttggtgtcattgaaaaa 40951840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 41105385 - 41105421
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  41105385 atattatatttgttacattgttggtgtcattgaaaaa 41105421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 41144793 - 41144829
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  41144793 atattatatttgttacattgttggtgtcattgaaaaa 41144829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 43117336 - 43117300
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  43117336 atattatatttgttacattgttggtgtcattgaaaaa 43117300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 48458488 - 48458520
Alignment:
Q  21 atattatatttgttatattgttggtatcattga 53  Q
    ||||||||||||||||||| |||||||||||||    
T  48458488 atattatatttgttatattattggtatcattga 48458520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 51153304 - 51153268
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  51153304 atattatatttgttacattgttggtgtcattgaaaaa 51153268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 65606 - 65672
Alignment:
Q  22 tattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagtg 88  Q
    |||||||||||||||||||||||||||||||||||| | ||||||| ||||||| ||| | ||||||    
T  65606 tattatatttgttatattgttggtatcattgaaaaagataaatatagtttgttacaatatgaaagtg 65672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 9007443 - 9007496
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  9007443 atattatatttgttatattgttggtatcattgaaaaa-ataaatataatttgtta 9007496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 39199312 - 39199376
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaag 86  Q
    ||||||||||||||||||||||||||||||||||||| | || |||||||| ||| ||| ||||||    
T  39199312 atattatatttgttatattgttggtatcattgaaaaa-ataagtataatttattacaatataaaag 39199376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 11420434 - 11420398
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||||||||||||||||||||||||    
T  11420434 atattatatttgttatattgttggtatcattgaaaaa 11420398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 6629207 - 6629274
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagtg 88  Q
    ||||||||||||||||||||||||| |||||||| || | ||||||||||| ||| ||| | ||||||    
T  6629207 atattatatttgttatattgttggtgtcattgaataagataaatataatttattacaatatgaaagtg 6629274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 3501406 - 3501352
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    |||||||||||||||||||||| |||||||||||||| | || ||| ||||||||    
T  3501406 atattatatttgttatattgttagtatcattgaaaaagataagtatgatttgtta 3501352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 11579013 - 11578975
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaata 59  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  11579013 atattatatttgttatattgttggtgtcattgaaaaata 11578975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 10867278 - 10867225
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtt 74  Q
    ||||||||||| ||||||||||||||||||||||| | | |||||| |||||||    
T  10867278 atattatatttattatattgttggtatcattgaaatagataaatatgatttgtt 10867225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 34142940 - 34142875
Alignment:
Q  23 attatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagtg 88  Q
    ||||||||||||||||||||||||||||| ||||| | || |||| ||||||| ||| | ||||||    
T  34142940 attatatttgttatattgttggtatcatttaaaaagataagtatagtttgttacaatatgaaagtg 34142875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 24314155 - 24314191
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||| ||||||||||||||||||||||||||||||||    
T  24314155 atataatatttgttatattgttggtatcattgaaaaa 24314191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 45521547 - 45521583
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||||||||||||||||||| ||||    
T  45521547 atattatatttgttatattgttggtatcattggaaaa 45521583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 3541263 - 3541317
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    |||||||||||||||| ||||||| || ||||||||||| || |||| |||||||    
T  3541263 atattatatttgttatgttgttggcataattgaaaaatataagtatagtttgtta 3541317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 6746979 - 6746941
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaata 59  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  6746979 atattatatttgttacattgttggtgtcattgaaaaata 6746941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 344
Target Start/End: Complemental strand, 7375855 - 7375813
Alignment:
Q  302 ttaaaaagaaatgatatttaaacaactattttatgataacttt 344  Q
    ||||| |||||||||||||||||| | ||||||||||||||||    
T  7375855 ttaaagagaaatgatatttaaacatccattttatgataacttt 7375813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 27748264 - 27748302
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaata 59  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  27748264 atattatatttgttacattgttggtgtcattgaaaaata 27748302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 31261318 - 31261280
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaata 59  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  31261318 atattatatttgttatattgttaatatcattgaaaaata 31261280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 33848942 - 33848980
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaata 59  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  33848942 atattatatttgttacattgttggtgtcattgaaaaata 33848980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 340
Target Start/End: Original strand, 40074856 - 40074890
Alignment:
Q  306 aaagaaatgatatttaaacaactattttatgataa 340  Q
    ||||||||||||||| |||||||||||||||||||    
T  40074856 aaagaaatgatatttgaacaactattttatgataa 40074890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 42328672 - 42328618
Alignment:
Q  25 tatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataat 79  Q
    |||||||||| |||||||||| |||||||||||||  | |||| |||||||||||    
T  42328672 tatatttgttgtattgttggtgtcattgaaaaatattagtatattttgttataat 42328618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 45413891 - 45413956
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagt 87  Q
    ||||||||||| ||||||||||| ||||||| ||||| | || |||||||| ||||||| |||||||    
T  45413891 atattatatttattatattgttgttatcatt-aaaaaaaaaagtataatttattataatataaaagt 45413956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 2442299 - 2442352
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtt 74  Q
    ||||||||||||||||||| ||||| ||||||||||| | ||| || |||||||    
T  2442299 atattatatttgttatattattggtttcattgaaaaagataaacatgatttgtt 2442352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 15172415 - 15172362
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtt 74  Q
    |||||||||||| |||||||||||| ||||||||||| | ||  ||||||||||    
T  15172415 atattatatttgctatattgttggtgtcattgaaaaagataagaataatttgtt 15172362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 16844702 - 16844665
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  16844702 aatattatatttgttacattgttggtgtcattgaaaaa 16844665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 17046394 - 17046431
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  17046394 aatattatatttgttacattgttggtgtcattgaaaaa 17046431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 17950045 - 17950098
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtt 74  Q
    ||||||||||||||||||||||| | ||||||| ||| | ||||||| ||||||    
T  17950045 atattatatttgttatattgttgatgtcattgacaaagataaatatagtttgtt 17950098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 27467078 - 27467041
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  27467078 aatattatatttgttatattgctggtgtcattgaaaaa 27467041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 34805156 - 34805119
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  34805156 aatattatatttgttacattgttggtgtcattgaaaaa 34805119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 35916802 - 35916839
Alignment:
Q  22 tattatatttgttatattgttggtatcattgaaaaata 59  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  35916802 tattatatttgttacattgttggtgtcattgaaaaata 35916839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 43818686 - 43818723
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  43818686 aatattatatttgttacattgttggtgtcattgaaaaa 43818723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 340
Target Start/End: Original strand, 4312549 - 4312581
Alignment:
Q  308 agaaatgatatttaaacaactattttatgataa 340  Q
    ||||||||||||| |||||||||||||||||||    
T  4312549 agaaatgatatttgaacaactattttatgataa 4312581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 4438643 - 4438679
Alignment:
Q  23 attatatttgttatattgttggtatcattgaaaaata 59  Q
    |||||||||| |||||||||||| |||||||||||||    
T  4438643 attatatttgctatattgttggtgtcattgaaaaata 4438679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 11876441 - 11876389
Alignment:
Q  22 tattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtt 74  Q
    |||||||||||||||||| ||| | ||||||||||| | |||||| |||||||    
T  11876441 tattatatttgttatattattgttgtcattgaaaaagataaatatgatttgtt 11876389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 11891448 - 11891396
Alignment:
Q  22 tattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtt 74  Q
    |||||||||||||||||| ||| | ||||||||||| | |||||| |||||||    
T  11891448 tattatatttgttatattattgttgtcattgaaaaagataaatatgatttgtt 11891396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 14449855 - 14449891
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  14449855 atattatatttgttacattgttggtgtcattgaaaaa 14449891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 14531622 - 14531658
Alignment:
Q  308 agaaatgatatttaaacaactattttatgataacttt 344  Q
    |||||||||||||  ||||||||||||||||||||||    
T  14531622 agaaatgatatttgtacaactattttatgataacttt 14531658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 27877397 - 27877433
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  27877397 atattatatttgttacattgttggtgtcattgaaaaa 27877433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 27914372 - 27914408
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  27914372 atattatatttgttacattgttggtgtcattgaaaaa 27914408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 27960791 - 27960827
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  27960791 atattatatttgttacattgttggtgtcattgaaaaa 27960827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 28017578 - 28017614
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  28017578 atattatatttgttacattgttggtgtcattgaaaaa 28017614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 29862667 - 29862703
Alignment:
Q  22 tattatatttgttatattgttggtatcattgaaaaat 58  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  29862667 tattatatttgttatattattggtatcattaaaaaat 29862703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 344
Target Start/End: Complemental strand, 33605148 - 33605112
Alignment:
Q  308 agaaatgatatttaaacaactattttatgataacttt 344  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  33605148 agaaatgatatttgaacaaccattttatgataacttt 33605112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 38137971 - 38138007
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  38137971 atattatatttgttacattgttggtgtcattgaaaaa 38138007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 38909107 - 38909071
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  38909107 atattatatttgttacattgttggtgtcattgaaaaa 38909071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 39486282 - 39486318
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  39486282 atattatatttgttacattgttggtgtcattgaaaaa 39486318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 40048923 - 40048959
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  40048923 atattatatttgttacattgttggtgtcattgaaaaa 40048959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 41526135 - 41526099
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  41526135 atattatatttgttacattgttggtgtcattgaaaaa 41526099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 344
Target Start/End: Complemental strand, 42012660 - 42012624
Alignment:
Q  308 agaaatgatatttaaacaactattttatgataacttt 344  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  42012660 agaaatgatatttatacaactactttatgataacttt 42012624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 44654772 - 44654736
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  44654772 atattatatttgttacattgttggtgtcattgaaaaa 44654736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 44908363 - 44908327
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  44908363 atattatatttgttacattgttggtgtcattgaaaaa 44908327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 28069656 - 28069589
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagtg 88  Q
    ||||||||||||||||||||||||||| ||| ||||| | |||| |||||||||| ||| ||||||||    
T  28069656 atattatatttgttatattgttggtattattcaaaaagataaatttaatttgttacaatataaaagtg 28069589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 10039970 - 10039916
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    |||||||||||| |||||||||||| ||||||||||| | |||||||||||||||    
T  10039970 atattatatttgctatattgttggtgtcattgaaaaagataaatataatttgtta 10039916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 24862514 - 24862572
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataat 79  Q
    |||||||||||||||||||| |||||| ||||||||| | || ||||||||||||||||    
T  24862514 atattatatttgttatattgctggtataattgaaaaagataagtataatttgttataat 24862572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 24650027 - 24650063
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||||||||||||||||||||||||    
T  24650027 atattatatttgttatattgttggtatcattgaaaaa 24650063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 6547776 - 6547725
Alignment:
Q  23 attatatttgttatattgttggtatcattgaaaaatagaaatataatttgtt 74  Q
    ||||||||||||||||||||||| ||||||||||| |  |||||||||||||    
T  6547776 attatatttgttatattgttggtgtcattgaaaaagattaatataatttgtt 6547725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 6112329 - 6112267
Alignment:
Q  23 attatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaa 85  Q
    ||||||||| ||||||||||||||||||||||||  | || |||||||||||| ||| |||||    
T  6112329 attatattttttatattgttggtatcattgaaaataataagtataatttgttacaatataaaa 6112267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 7814200 - 7814254
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    ||||||||||||||| ||||||||||| ||||||||| | || ||||||||||||    
T  7814200 atattatatttgttacattgttggtattattgaaaaagataagtataatttgtta 7814254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 38237498 - 38237444
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    |||||||||||||||||||||| || ||||||||||| | || ||||||||||||    
T  38237498 atattatatttgttatattgtttgtgtcattgaaaaaaataagtataatttgtta 38237444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 4094311 - 4094246
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaag 86  Q
    |||||||||||||||||| |||||| || |||||||||| || |||| ||||||| ||| ||||||    
T  4094311 atattatatttgttatatcgttggtttctttgaaaaatataagtatagtttgttacaatataaaag 4094246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 1441595 - 1441627
Alignment:
Q  22 tattatatttgttatattgttggtatcattgaa 54  Q
    |||||||||||||||||||||||||||||||||    
T  1441595 tattatatttgttatattgttggtatcattgaa 1441627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 4406882 - 4406918
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||||||||||||| |||||||||||    
T  4406882 atattatatttgttatattgttggtgtcattgaaaaa 4406918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 350
Target Start/End: Original strand, 10945025 - 10945065
Alignment:
Q  310 aaatgatatttaaacaactattttatgataactttcttttt 350  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  10945025 aaatgatatttgaacaactattttatgataacttttttttt 10945065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 19062913 - 19062965
Alignment:
Q  23 attatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    ||||||||||||||||||||||||| ||||||||| | || |||| |||||||    
T  19062913 attatatttgttatattgttggtattattgaaaaagataattatagtttgtta 19062965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 47439773 - 47439709
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaa 85  Q
    |||||||||||||||||||||| || ||||||||||| | || ||||  |||||| |||||||||    
T  47439773 atattatatttgttatattgttcgtgtcattgaaaaagataagtataggttgttacaatttaaaa 47439709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 13141857 - 13141791
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagtg 88  Q
    ||||||||||||||||||||||||| ||||||||| | | ||||||| ||||||| ||| | ||||||    
T  13141857 atattatatttgttatattgttggtgtcattgaaata-ataaatatattttgttacaatatgaaagtg 13141791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 32961203 - 32961242
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaata 59  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  32961203 aatattatatttgttacattgttggtgtcattgaaaaata 32961242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 17816157 - 17816123
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaa 55  Q
    ||||||||||||||||||||||||| |||||||||    
T  17816157 atattatatttgttatattgttggtgtcattgaaa 17816123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 19050833 - 19050867
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaa 55  Q
    ||||||||||||||||||||||||| |||||||||    
T  19050833 atattatatttgttatattgttggtgtcattgaaa 19050867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 23154462 - 23154424
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaata 59  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  23154462 atattatatttgttacattgttggtgtcattgaaaaata 23154424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 24060491 - 24060557
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagt 87  Q
    ||||||||| ||||||||||||| ||||||||||||||  ||  ||| ||||||| ||| |||||||    
T  24060491 atattatatgtgttatattgttgatatcattgaaaaatttaatcatagtttgttacaatataaaagt 24060557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 24875429 - 24875371
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataat 79  Q
    |||||||||||||||||||| | |||| ||||||||| | || |||| |||||||||||    
T  24875429 atattatatttgttatattgctcgtataattgaaaaagataagtatagtttgttataat 24875371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 28737310 - 28737256
Alignment:
Q  31 tgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaa 85  Q
    ||||||||||||| | ||||||||||| | |||| || |||||||||||||||||    
T  28737310 tgttatattgttgatgtcattgaaaaagataaatttagtttgttataatttaaaa 28737256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 47293583 - 47293529
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    ||||| ||||||||||||| ||| ||||||||| ||||| ||||||| |||||||    
T  47293583 atattgtatttgttatattattgttatcattgagaaatataaatatagtttgtta 47293529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 4492687 - 4492724
Alignment:
Q  22 tattatatttgttatattgttggtatcattgaaaaata 59  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  4492687 tattatatttgttacattgttggtgtcattgaaaaata 4492724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 18956981 - 18957018
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  18956981 aatattatatttgttacattgttggtgtcattgaaaaa 18957018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 29449423 - 29449460
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  29449423 aatattatatttgttacattgttggtgtcattgaaaaa 29449460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 40240620 - 40240657
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  40240620 aatattatatttgttacattgttggtgtcattgaaaaa 40240657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 40788869 - 40788832
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  40788869 aatattatatttgttacattgttggtgtcattgaaaaa 40788832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 43110856 - 43110819
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  43110856 aatattatatttgttacattgttggtgtcattgaaaaa 43110819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 5483225 - 5483189
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  5483225 atattatatttgttacattgttggtgtcattgaaaaa 5483189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 340
Target Start/End: Complemental strand, 8241106 - 8241074
Alignment:
Q  308 agaaatgatatttaaacaactattttatgataa 340  Q
    |||||||||||||||| ||||||||||||||||    
T  8241106 agaaatgatatttaaataactattttatgataa 8241074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 11373252 - 11373208
Alignment:
Q  22 tattatatttgttatattgttggtatcattgaaaaatagaaatat 66  Q
    |||||||||||||||||| ||| | ||||||||||||| ||||||    
T  11373252 tattatatttgttatattattgctgtcattgaaaaatataaatat 11373208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 13703363 - 13703415
Alignment:
Q  22 tattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtt 74  Q
    |||||||||||||||||| ||| | ||||||||||| | |||||| |||||||    
T  13703363 tattatatttgttatattattgttgtcattgaaaaagataaatatgatttgtt 13703415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 22711499 - 22711535
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  22711499 atattatatttattatatttttggtatcattgaaaaa 22711535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 35910098 - 35910062
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  35910098 atattatatttgttacattgttggtgtcattgaaaaa 35910062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 40036272 - 40036308
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  40036272 atattatatttgttacattgttggtgtcattgaaaaa 40036308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 41343573 - 41343609
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  41343573 atattatatttgttacattgttggtgtcattgaaaaa 41343609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 44652130 - 44652162
Alignment:
Q  21 atattatatttgttatattgttggtatcattga 53  Q
    ||||||||||||||||||||||||| |||||||    
T  44652130 atattatatttgttatattgttggtgtcattga 44652162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 47840552 - 47840516
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  47840552 atattatatttgttacattgttggtgtcattgaaaaa 47840516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 36535 - 36497
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaata 59  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36535 atattatatttgttatattgttggtatcattgaaaaata 36497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 1135186 - 1135240
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    |||||||||||||||||||| |||||||||||||||||| ||  |||||||||||    
T  1135186 atattatatttgttatattggtggtatcattgaaaaatataagaataatttgtta 1135240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 14000830 - 14000776
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    ||||||||||| ||||||||||||||||||||||||||| || |||| |||||||    
T  14000830 atattatatttattatattgttggtatcattgaaaaatataagtatagtttgtta 14000776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 14052225 - 14052163
Alignment:
Q  26 atatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagtg 88  Q
    |||||||||||||||||||||||||||||||| | || |||| ||||||||||| | ||||||    
T  14052225 atatttgttatattgttggtatcattgaaaaagataattatagtttgttataatatgaaagtg 14052163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 29632766 - 29632819
Alignment:
Q  22 tattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    |||||||||| ||||||||||| ||||||||||||||| || ||||||||||||    
T  29632766 tattatatttattatattgttgatatcattgaaaaatataagtataatttgtta 29632819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 31312422 - 31312474
Alignment:
Q  17 tccaatattatatttgttatattgttggtatcattgaaaaatagaaatataat 69  Q
    |||||||||||||||||||||||||| |||  ||||||||||| |||||||||    
T  31312422 tccaatattatatttgttatattgtttgtacaattgaaaaatataaatataat 31312474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 5856417 - 5856355
Alignment:
Q  26 atatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagtg 88  Q
    |||||||||||||||||||||||||||||| | | || |||| ||||||| ||| ||||||||    
T  5856417 atatttgttatattgttggtatcattgaaacagataagtatagtttgttacaatataaaagtg 5856355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 9051071 - 9051121
Alignment:
Q  24 ttatatttgttatattgttggtatcattgaaaaatagaaatataatttgtt 74  Q
    |||||||||||||||||||| | ||||||||||||| |||||| |||||||    
T  9051071 ttatatttgttatattgttgttgtcattgaaaaataaaaatatgatttgtt 9051121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 31378217 - 31378271
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    ||||||||||||||||||||||||||  ||| |||| || |||||||||||||||    
T  31378217 atattatatttgttatattgttggtacaattaaaaattataaatataatttgtta 31378271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 23085355 - 23085319
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||||||||||||||||||| |||||    
T  23085355 atattatatttgttatattgttggtatcattaaaaaa 23085319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 29663456 - 29663521
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagtg 88  Q
    ||||||||||||||||||||||||| ||||||||| ||  || |||||||||||| ||| | ||||||    
T  29663456 atattatatttgttatattgttggtgtcattgaaagat--aagtataatttgttaaaatatgaaagtg 29663521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 41863301 - 41863265
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||||||||||| ||||||||||||    
T  41863301 atattatatttgttatattgttggcatcattgaaaaa 41863265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 33761346 - 33761413
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagtg 88  Q
    |||||||||||||||| ||||||| || ||||||||| | || |||||||| ||| ||| ||||||||    
T  33761346 atattatatttgttattttgttggcataattgaaaaagataagtataatttattacaatataaaagtg 33761413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 1140347 - 1140313
Alignment:
Q  25 tatatttgttatattgttggtatcattgaaaaata 59  Q
    ||||||||||||| |||||||||||||||||||||    
T  1140347 tatatttgttatagtgttggtatcattgaaaaata 1140313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 4353071 - 4353017
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    ||||||||||||||||||| ||||| | ||||||||| | || ||||||||||||    
T  4353071 atattatatttgttatattattggtgtaattgaaaaagataagtataatttgtta 4353017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 16166528 - 16166566
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaata 59  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  16166528 atattatatttgttacattgttggtgtcattgaaaaata 16166566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 36194213 - 36194263
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataattt 71  Q
    ||||||||||||||||||||||| ||  ||||||||||| || ||||||||    
T  36194213 atattatatttgttatattgttgatactattgaaaaatataagtataattt 36194263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 345
Target Start/End: Original strand, 38890418 - 38890452
Alignment:
Q  311 aatgatatttaaacaactattttatgataactttc 345  Q
    ||||||||||| |||||||||||||||||||||||    
T  38890418 aatgatatttatacaactattttatgataactttc 38890452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 39937967 - 39938021
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    ||||||||||| |||||||| |||||||||||| ||||| || |||| |||||||    
T  39937967 atattatatttattatattggtggtatcattgataaatataagtatagtttgtta 39938021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 40715855 - 40715908
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttata 77  Q
    |||||||||||||||||||||||||   ||||||||| | || ||||||||||||||    
T  40715855 atattatatttgttatattgttggt---attgaaaaagataagtataatttgttata 40715908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 42170071 - 42170013
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataat 79  Q
    |||||||| || ||||||||||||| |||||| |||||| || |||| |||||||||||    
T  42170071 atattataattcttatattgttggtgtcattgtaaaatataagtatagtttgttataat 42170013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 5589851 - 5589888
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  5589851 aatattatatttgttacattgttggtgtcattgaaaaa 5589888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 16051158 - 16051195
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  16051158 aatattatatttgttacattgttggtgtcattgaaaaa 16051195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 25820376 - 25820339
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  25820376 aatattatatttgttatattgctggtgtcattgaaaaa 25820339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 31885048 - 31885085
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  31885048 aatattatatttgttacattgttggtgtcattgaaaaa 31885085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 38632243 - 38632308
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaa 85  Q
    ||||||||||||||||| |||||| | ||||||||||||| || |||| ||| ||| ||| |||||    
T  38632243 aatattatatttgttatgttgttgatgtcattgaaaaatataagtatagtttattaaaatataaaa 38632308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 789265 - 789301
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  789265 atattatatttgttacattgttggtgtcattgaaaaa 789301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 2529903 - 2529867
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  2529903 atattatatttgttaaattgttggtgtcattgaaaaa 2529867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 17822396 - 17822432
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  17822396 atattatatttgttatattgttgttatcgttgaaaaa 17822432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 18282807 - 18282771
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  18282807 atattatatttgttatattgttgttatcattggaaaa 18282771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 19361471 - 19361435
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  19361471 atattatatttgttacattgttggtgtcattgaaaaa 19361435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 19518777 - 19518741
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  19518777 atattatatttgttacattgttggtgtcattgaaaaa 19518741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 28479623 - 28479667
Alignment:
Q  22 tattatatttgttatattgttggtatcattgaaaaatagaaatat 66  Q
    |||||||||||||||||| ||| ||| ||||||||||| ||||||    
T  28479623 tattatatttgttatattattgctataattgaaaaatataaatat 28479667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 28746572 - 28746608
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  28746572 atattatatttgttacattgttggtgtcattgaaaaa 28746608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 49
Target Start/End: Original strand, 40293068 - 40293096
Alignment:
Q  21 atattatatttgttatattgttggtatca 49  Q
    |||||||||||||||||||||||||||||    
T  40293068 atattatatttgttatattgttggtatca 40293096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 42112063 - 42112095
Alignment:
Q  21 atattatatttgttatattgttggtatcattga 53  Q
    ||||||||||||||||||||||||| |||||||    
T  42112063 atattatatttgttatattgttggtgtcattga 42112095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 42416525 - 42416489
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  42416525 atattatatttgttacattgttggtgtcattgaaaaa 42416489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 43222364 - 43222416
Alignment:
Q  26 atatttgttatattgttggtatcattgaaaaatagaaatataatttgttataa 78  Q
    |||||| ||||||||||||||||||| ||||| | || |||| ||||||||||    
T  43222364 atatttattatattgttggtatcattcaaaaagataagtatagtttgttataa 43222416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 51283725 - 51283779
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    ||||| ||||||||||||||||||||||||||||||| | || ||||||||||||    
T  51283725 atattgtatttgttatattgttggtatcattgaaaaagataagtataatttgtta 51283779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 26410480 - 26410517
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||| |||||||||||||||||||||||    
T  26410480 aatattatatttgtaatattgttggtatcattgaaaaa 26410517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 45599651 - 45599688
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| |||||||||||||||||||||    
T  45599651 aatattatatttgttacattgttggtatcattgaaaaa 45599688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 34996074 - 34996038
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||| ||||||||||||||||||||||    
T  34996074 atattatatttgttgtattgttggtatcattgaaaaa 34996038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 46089288 - 46089327
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaata 59  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  46089288 aatattatatttgttacattgttggtgtcattgaaaaata 46089327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 47410970 - 47411021
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttg 72  Q
    |||||||| ||||||| |||||| ||||||||||||||| || |||||||||    
T  47410970 atattataattgttatgttgttgatatcattgaaaaatataagtataatttg 47411021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 47411106 - 47411157
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttg 72  Q
    |||||||| ||||||| |||||| ||||||||||||||| || |||||||||    
T  47411106 atattataattgttatgttgttgatatcattgaaaaatataagtataatttg 47411157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 5239442 - 5239408
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaa 55  Q
    ||||||||||||||||||||||||| |||||||||    
T  5239442 atattatatttgttatattgttggtgtcattgaaa 5239408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 8231700 - 8231642
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataat 79  Q
    |||||||||||  ||| |||||||| ||||||||||| | || ||||||||||||||||    
T  8231700 atattatattttctattttgttggtttcattgaaaaagataagtataatttgttataat 8231642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 16738285 - 16738335
Alignment:
Q  25 tatatttgttatattgttggtatcattgaaaaatagaaatataatttgtta 75  Q
    |||||| |||||||||||||| || |||||||| | |||||||||||||||    
T  16738285 tatattagttatattgttggtttctttgaaaaagataaatataatttgtta 16738335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 23344690 - 23344656
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaa 55  Q
    |||||||||||||||||||||| ||||||||||||    
T  23344690 atattatatttgttatattgttagtatcattgaaa 23344656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 340
Target Start/End: Complemental strand, 47392500 - 47392466
Alignment:
Q  306 aaagaaatgatatttaaacaactattttatgataa 340  Q
    ||||||||||||||| |||||||||||||||||||    
T  47392500 aaagaaatgatatttgaacaactattttatgataa 47392466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 47410499 - 47410465
Alignment:
Q  23 attatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||||||| ||||||||||||||    
T  47410499 attatatttgttatattgtttgtatcattgaaaaa 47410465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 50585794 - 50585844
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataattt 71  Q
    ||||||||||||||||||||||| |||| |||||||| | || ||||||||    
T  50585794 atattatatttgttatattgttgatatccttgaaaaagataagtataattt 50585844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 7040248 - 7040211
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  7040248 aatattatatttgttacattgctggtatcattgaaaaa 7040211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 36592600 - 36592637
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  36592600 aatattatatttgttacattgttggtgtcattgaaaaa 36592637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 52460698 - 52460661
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  52460698 aatattatatttgttacattgttggtgtcattgaaaaa 52460661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 13336923 - 13336887
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  13336923 atattatatttgttacattgttggtgtcattgaaaaa 13336887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 15496719 - 15496755
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  15496719 atattatatttgttacattgttggtgtcattgaaaaa 15496755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 26645027 - 26645063
Alignment:
Q  308 agaaatgatatttaaacaactattttatgataacttt 344  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  26645027 agaaatgatatttgaacacctattttatgataacttt 26645063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 27371304 - 27371268
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  27371304 atattatatttgttatattgttggtataatttaaaaa 27371268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 30333926 - 30333890
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||| |||||||||| |||||||||||    
T  30333926 atattatatttgttgtattgttggtgtcattgaaaaa 30333890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 44540546 - 44540582
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  44540546 atattatatttgttacattgttggtgtcattgaaaaa 44540582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 44762978 - 44763014
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  44762978 atattatatttgttacattgttggtgtcattgaaaaa 44763014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 46090370 - 46090406
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  46090370 atattatatttgttacattgttggtgtcattgaaaaa 46090406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 46851206 - 46851242
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  46851206 atattatatttgttacattgttggtgtcattgaaaaa 46851242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 47670736 - 47670772
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||| |||||||||||||||||| |||||||||||    
T  47670736 atattaaatttgttatattgttggtgtcattgaaaaa 47670772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 54113170 - 54113134
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  54113170 atattatatttgttacattgttggtgtcattgaaaaa 54113134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 54203995 - 54204031
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  54203995 atattatatttgttagattgttggtgtcattgaaaaa 54204031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000009; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 8866882 - 8866846
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||||||||||||||||||||||||    
T  8866882 atattatatttgttatattgttggtatcattgaaaaa 8866846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 3842102 - 3842035
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagtg 88  Q
    |||||||| |||||||| |||| || ||||||||||||| || |||||||||||||||| | ||||||    
T  3842102 atattatagttgttatagtgtttgtgtcattgaaaaatataagtataatttgttataatatgaaagtg 3842035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 344
Target Start/End: Complemental strand, 10053228 - 10053192
Alignment:
Q  308 agaaatgatatttaaacaactattttatgataacttt 344  Q
    |||||||||||||||||||||||||| ||||||||||    
T  10053228 agaaatgatatttaaacaactattttttgataacttt 10053192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 32279600 - 32279533
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagt 87  Q
    ||||||||||||||| |||||||  ||||||||||||| | ||||||| |||| || ||| |||||||    
T  32279600 aatattatatttgttgtattgttaatatcattgaaaaagataaatatagtttgctagaatataaaagt 32279533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 3849915 - 3849878
Alignment:
Q  20 aatattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  3849915 aatattatatttgttacattgttggtgtcattgaaaaa 3849878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 9155467 - 9155430
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaat 58  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  9155467 atattatattttttatattattggtatcattgaaaaat 9155430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 6018826 - 6018862
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  6018826 atattatatttgttacattgttggtgtcattgaaaaa 6018862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 7540928 - 7540892
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  7540928 atattatatttgttacattgttggtgtcattgaaaaa 7540892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 8872568 - 8872532
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    |||||||||||||||||||||| |||||||| |||||    
T  8872568 atattatatttgttatattgtttgtatcattcaaaaa 8872532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 17293988 - 17293956
Alignment:
Q  24 ttatatttgttatattgttggtatcattgaaaa 56  Q
    ||||||||||||| |||||||||||||||||||    
T  17293988 ttatatttgttattttgttggtatcattgaaaa 17293956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 17505309 - 17505273
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  17505309 atattatatttgttacattgttggtgtcattgaaaaa 17505273  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 28471567 - 28471531
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  28471567 atattatatttgttacattgttggtgtcattgaaaaa 28471531  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 29043026 - 29042990
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  29043026 atattatatttgttacattgttggtgtcattgaaaaa 29042990  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 29976136 - 29976100
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  29976136 atattatatttgttacattgttggtgtcattgaaaaa 29976100  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 344
Target Start/End: Original strand, 32621798 - 32621838
Alignment:
Q  304 aaaaagaaatgatatttaaacaactattttatgataacttt 344  Q
    |||||||||||||||||| ||||| ||||||||| ||||||    
T  32621798 aaaaagaaatgatatttatacaaccattttatgacaacttt 32621838  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 34207255 - 34207291
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  34207255 atattatatttgttacattgttggtgtcattgaaaaa 34207291  T

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Target: scaffold0221 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 10707 - 10644
Alignment:
Q  25 tatatttgttatattgttggtatcattgaaaaatagaaatataatttgttataatttaaaagtg 88  Q
    ||||||||||||||||||||||| | ||||||| | ||||||| ||||||| ||| | ||||||    
T  10707 tatatttgttatattgttggtattagtgaaaaagataaatatagtttgttacaatatgaaagtg 10644  T

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Target: scaffold0257 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 344
Target Start/End: Original strand, 23977 - 24018
Alignment:
Q  303 taaaaagaaatgatatttaaacaactattttatgataacttt 344  Q
    |||| ||||||||||||| |||||| ||||||||||||||||    
T  23977 taaagagaaatgatatttgaacaaccattttatgataacttt 24018  T

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Target: scaffold0318 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 545 - 581
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  545 atattatatttgttacattgttggtctcattgaaaaa 581  T

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Target: scaffold0160 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 26422 - 26458
Alignment:
Q  308 agaaatgatatttaaacaactattttatgataacttt 344  Q
    ||||||||||||||||||||  |||||||||||||||    
T  26422 agaaatgatatttaaacaaccgttttatgataacttt 26458  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 138209 - 138245
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  138209 atattatatttgttacattgttggtgtcattgaaaaa 138245  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 228532 - 228568
Alignment:
Q  21 atattatatttgttatattgttggtatcattgaaaaa 57  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  228532 atattatatttgttacattgttggtgtcattgaaaaa 228568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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