View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18038_low_2 (Length: 605)

Name: NF18038_low_2
Description: NF18038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18038_low_2
NF18038_low_2
[»] chr8 (61 HSPs)
chr8 (1-338)||(8300349-8300686)
chr8 (1-338)||(7924932-7925269)
chr8 (1-338)||(41664625-41664962)
chr8 (1-335)||(9923147-9923481)
chr8 (42-338)||(32267141-32267437)
chr8 (1-177)||(172457-172633)
chr8 (1-317)||(20824845-20825162)
chr8 (1-336)||(13878746-13879081)
chr8 (1-338)||(17700026-17700363)
chr8 (2-150)||(25090934-25091082)
chr8 (224-335)||(7453121-7453232)
chr8 (40-306)||(42176846-42177110)
chr8 (213-306)||(29721200-29721293)
chr8 (253-333)||(10530458-10530538)
chr8 (236-311)||(36157935-36158010)
chr8 (213-335)||(15539815-15539937)
chr8 (85-179)||(37434375-37434469)
chr8 (213-306)||(23942845-23942938)
chr8 (86-166)||(24794377-24794457)
chr8 (224-311)||(4987349-4987436)
chr8 (236-306)||(24794501-24794571)
chr8 (235-332)||(6245864-6245961)
chr8 (213-305)||(18187903-18187995)
chr8 (86-157)||(11393786-11393857)
chr8 (224-335)||(12332617-12332728)
chr8 (213-288)||(37165428-37165503)
chr8 (236-318)||(6901718-6901800)
chr8 (236-306)||(11393620-11393690)
chr8 (249-335)||(12341361-12341447)
chr8 (247-305)||(25193880-25193938)
chr8 (221-327)||(26774515-26774621)
chr8 (258-335)||(36493184-36493261)
chr8 (213-299)||(43249100-43249186)
chr8 (91-157)||(43249243-43249308)
chr8 (236-318)||(43612462-43612544)
chr8 (240-329)||(17659626-17659715)
chr8 (213-294)||(36025279-36025360)
chr8 (213-338)||(41691017-41691142)
chr8 (85-133)||(18187776-18187824)
chr8 (26-170)||(43271008-43271151)
chr8 (245-304)||(12135013-12135072)
chr8 (235-304)||(4991987-4992056)
chr8 (242-311)||(16375387-16375456)
chr8 (85-158)||(23942717-23942790)
chr8 (228-305)||(45255130-45255207)
chr8 (86-158)||(25320442-25320514)
chr8 (76-139)||(12332469-12332532)
chr8 (224-327)||(14345188-14345291)
chr8 (86-161)||(16048350-16048425)
chr8 (260-311)||(28453754-28453805)
chr8 (5-48)||(38046908-38046951)
chr8 (213-335)||(5585447-5585569)
chr8 (265-335)||(5585751-5585821)
chr8 (258-304)||(28992510-28992556)
chr8 (224-294)||(42451941-42452011)
chr8 (224-318)||(43611468-43611562)
chr8 (221-294)||(10800962-10801035)
chr8 (85-134)||(26774708-26774757)
chr8 (238-294)||(8445596-8445652)
chr8 (247-311)||(16839160-16839224)
chr8 (86-150)||(40366279-40366343)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-338)||(105100-105437)
[»] chr7 (51 HSPs)
chr7 (1-338)||(4937385-4937722)
chr7 (1-338)||(11276505-11276842)
chr7 (1-338)||(29968520-29968857)
chr7 (1-335)||(17721181-17721515)
chr7 (1-191)||(234842-235032)
chr7 (1-295)||(31423148-31423434)
chr7 (9-139)||(47877536-47877666)
chr7 (1-170)||(39931021-39931190)
chr7 (221-335)||(27218382-27218496)
chr7 (28-170)||(36364089-36364231)
chr7 (1-115)||(37255304-37255418)
chr7 (245-311)||(23054254-23054320)
chr7 (225-306)||(19735288-19735369)
chr7 (224-317)||(46626591-46626684)
chr7 (213-317)||(36227429-36227533)
chr7 (213-311)||(22819001-22819099)
chr7 (228-329)||(34232474-34232575)
chr7 (236-304)||(41340330-41340398)
chr7 (86-153)||(13553626-13553693)
chr7 (236-311)||(45993357-45993432)
chr7 (213-338)||(4164797-4164922)
chr7 (213-338)||(34207088-34207213)
chr7 (214-338)||(33820816-33820940)
chr7 (236-311)||(4078058-4078133)
chr7 (247-338)||(6335649-6335740)
chr7 (245-304)||(29917010-29917069)
chr7 (224-335)||(41805019-41805130)
chr7 (213-311)||(18768166-18768264)
chr7 (235-321)||(45871543-45871629)
chr7 (218-311)||(13440821-13440914)
chr7 (236-305)||(18671952-18672021)
chr7 (235-311)||(4344630-4344706)
chr7 (85-157)||(18768038-18768110)
chr7 (258-338)||(45164804-45164884)
chr7 (247-304)||(2820012-2820069)
chr7 (89-161)||(9895532-9895604)
chr7 (245-305)||(28173273-28173333)
chr7 (94-158)||(34457595-34457659)
chr7 (90-150)||(45844795-45844855)
chr7 (213-292)||(34104235-34104314)
chr7 (258-313)||(39930878-39930933)
chr7 (91-157)||(23887719-23887785)
chr7 (91-157)||(23898895-23898961)
chr7 (213-327)||(45460070-45460184)
chr7 (86-158)||(11341427-11341500)
chr7 (89-150)||(17056163-17056224)
chr7 (85-134)||(23811618-23811667)
chr7 (258-335)||(25018562-25018639)
chr7 (86-157)||(19735149-19735221)
chr7 (219-311)||(28740219-28740311)
chr7 (266-306)||(34791964-34792004)
[»] chr4 (49 HSPs)
chr4 (1-338)||(23641848-23642185)
chr4 (1-338)||(23647506-23647843)
chr4 (1-338)||(47419350-47419687)
chr4 (1-338)||(1827797-1828134)
chr4 (1-338)||(19755813-19756150)
chr4 (1-338)||(19783656-19783993)
chr4 (1-298)||(15740766-15741063)
chr4 (1-338)||(55724964-55725300)
chr4 (1-336)||(48312640-48312975)
chr4 (1-306)||(54482449-54482753)
chr4 (1-161)||(5789526-5789686)
chr4 (213-317)||(29553079-29553183)
chr4 (1-170)||(46146223-46146392)
chr4 (224-338)||(19733245-19733359)
chr4 (213-305)||(19115194-19115286)
chr4 (237-333)||(43516010-43516106)
chr4 (521-584)||(6271383-6271446)
chr4 (240-335)||(34976726-34976821)
chr4 (213-311)||(19648453-19648551)
chr4 (5-105)||(11586688-11586788)
chr4 (213-305)||(20396340-20396432)
chr4 (86-166)||(42952934-42953014)
chr4 (236-306)||(42952820-42952890)
chr4 (236-305)||(8935855-8935924)
chr4 (228-305)||(42779023-42779100)
chr4 (225-317)||(7662586-7662678)
chr4 (80-311)||(26694553-26694784)
chr4 (224-311)||(23872761-23872848)
chr4 (224-311)||(38296474-38296561)
chr4 (72-170)||(19733406-19733504)
chr4 (218-311)||(55299384-55299477)
chr4 (247-338)||(19308844-19308935)
chr4 (251-304)||(2072336-2072389)
chr4 (258-335)||(10562584-10562661)
chr4 (242-311)||(20675822-20675891)
chr4 (247-335)||(9691215-9691303)
chr4 (242-321)||(11586457-11586536)
chr4 (75-157)||(19115056-19115138)
chr4 (217-338)||(14538244-14538365)
chr4 (240-329)||(53486195-53486284)
chr4 (258-338)||(19162426-19162506)
chr4 (85-165)||(55464303-55464383)
chr4 (213-308)||(2365764-2365858)
chr4 (247-338)||(19837927-19838018)
chr4 (94-161)||(43516182-43516249)
chr4 (235-336)||(29328040-29328141)
chr4 (86-114)||(9691053-9691081)
chr4 (274-306)||(15342639-15342671)
chr4 (94-166)||(51072122-51072194)
[»] chr1 (44 HSPs)
chr1 (26-338)||(35541605-35541917)
chr1 (1-338)||(6051149-6051486)
chr1 (228-333)||(47622339-47622444)
chr1 (213-306)||(3544390-3544483)
chr1 (213-335)||(20987913-20988035)
chr1 (269-338)||(51052695-51052764)
chr1 (213-333)||(13867102-13867222)
chr1 (236-338)||(19042904-19043006)
chr1 (213-335)||(1247846-1247968)
chr1 (235-333)||(5809361-5809459)
chr1 (93-157)||(49264402-49264466)
chr1 (213-304)||(19014274-19014365)
chr1 (86-157)||(20796288-20796359)
chr1 (236-306)||(20796441-20796511)
chr1 (236-306)||(39431067-39431137)
chr1 (224-306)||(49264254-49264336)
chr1 (247-304)||(28358683-28358740)
chr1 (1-165)||(47622507-47622671)
chr1 (258-329)||(17708861-17708932)
chr1 (236-311)||(25504276-25504351)
chr1 (213-336)||(40562817-40562940)
chr1 (253-335)||(26721431-26721513)
chr1 (213-306)||(32642629-32642722)
chr1 (213-306)||(48434908-48435001)
chr1 (240-335)||(5497871-5497966)
chr1 (240-311)||(32352596-32352667)
chr1 (86-157)||(39430908-39430979)
chr1 (94-157)||(45270880-45270943)
chr1 (236-305)||(7396010-7396079)
chr1 (218-311)||(48072710-48072803)
chr1 (86-158)||(13112725-13112797)
chr1 (240-305)||(10710494-10710558)
chr1 (91-140)||(44692056-44692105)
chr1 (258-311)||(45271044-45271097)
chr1 (240-304)||(3074529-3074593)
chr1 (247-294)||(16586500-16586547)
chr1 (94-161)||(45795914-45795981)
chr1 (213-311)||(22191066-22191164)
chr1 (261-311)||(33259986-33260036)
chr1 (261-311)||(33280145-33280195)
chr1 (89-150)||(22191227-22191288)
chr1 (213-306)||(36192087-36192180)
chr1 (85-117)||(16631260-16631292)
chr1 (235-311)||(33142492-33142568)
[»] chr3 (68 HSPs)
chr3 (1-338)||(2364823-2365161)
chr3 (1-338)||(34332072-34332409)
chr3 (1-338)||(19919486-19919823)
chr3 (1-278)||(10322888-10323165)
chr3 (1-338)||(962420-962757)
chr3 (1-338)||(12341512-12341849)
chr3 (1-321)||(16179493-16179806)
chr3 (5-338)||(19891227-19891560)
chr3 (3-170)||(3141399-3141566)
chr3 (236-338)||(48569280-48569382)
chr3 (213-333)||(40512986-40513106)
chr3 (221-335)||(19876009-19876123)
chr3 (5-179)||(48569455-48569629)
chr3 (233-321)||(36731671-36731759)
chr3 (8-173)||(20531475-20531638)
chr3 (233-304)||(17077588-17077659)
chr3 (213-335)||(43120934-43121056)
chr3 (224-329)||(23819334-23819439)
chr3 (213-304)||(53942004-53942095)
chr3 (213-306)||(31675689-31675782)
chr3 (236-335)||(50545024-50545123)
chr3 (213-304)||(55367367-55367458)
chr3 (213-335)||(46907930-46908052)
chr3 (236-338)||(52907299-52907401)
chr3 (236-317)||(24925963-24926044)
chr3 (213-304)||(15481049-15481140)
chr3 (26-139)||(17077754-17077867)
chr3 (247-311)||(18381840-18381904)
chr3 (86-157)||(14863903-14863974)
chr3 (86-157)||(21739961-21740032)
chr3 (238-317)||(30166601-30166680)
chr3 (235-306)||(31920641-31920712)
chr3 (236-306)||(14863745-14863815)
chr3 (236-306)||(21739777-21739847)
chr3 (85-158)||(15481195-15481268)
chr3 (228-321)||(47538040-47538133)
chr3 (225-333)||(34830162-34830270)
chr3 (86-157)||(10868234-10868305)
chr3 (213-311)||(36709668-36709765)
chr3 (242-311)||(6175761-6175830)
chr3 (258-335)||(16672281-16672358)
chr3 (85-158)||(36709540-36709613)
chr3 (258-311)||(52250409-52250462)
chr3 (86-158)||(1231661-1231733)
chr3 (1-157)||(48930272-48930428)
chr3 (258-329)||(6825615-6825686)
chr3 (247-338)||(8130765-8130856)
chr3 (247-338)||(17270999-17271090)
chr3 (1-156)||(52250564-52250718)
chr3 (245-311)||(42674722-42674788)
chr3 (218-300)||(45968122-45968204)
chr3 (213-294)||(21735082-21735163)
chr3 (85-158)||(38774902-38774975)
chr3 (213-294)||(53504529-53504610)
chr3 (242-306)||(10868431-10868495)
chr3 (85-157)||(45684806-45684878)
chr3 (94-161)||(31675570-31675637)
chr3 (224-311)||(48930495-48930582)
chr3 (91-157)||(8948459-8948525)
chr3 (265-335)||(22733731-22733801)
chr3 (213-335)||(22733983-22734105)
chr3 (94-136)||(31920810-31920852)
chr3 (266-335)||(8948279-8948348)
chr3 (247-304)||(11584870-11584927)
chr3 (247-304)||(14309371-14309428)
chr3 (89-150)||(44888538-44888599)
chr3 (244-304)||(25388163-25388223)
chr3 (86-150)||(41367747-41367811)
[»] chr5 (53 HSPs)
chr5 (1-338)||(30731571-30731908)
chr5 (1-338)||(42514266-42514603)
chr5 (1-337)||(23238929-23239265)
chr5 (1-338)||(28534933-28535269)
chr5 (1-338)||(35983048-35983385)
chr5 (1-178)||(27116590-27116767)
chr5 (1-321)||(33170204-33170524)
chr5 (1-306)||(8299471-8299776)
chr5 (1-304)||(10780747-10781050)
chr5 (1-336)||(27796030-27796365)
chr5 (26-306)||(25856728-25857008)
chr5 (1-191)||(42928677-42928867)
chr5 (1-139)||(31642057-31642195)
chr5 (26-170)||(27165390-27165534)
chr5 (213-306)||(22094538-22094632)
chr5 (236-338)||(35121945-35122047)
chr5 (238-311)||(29572154-29572227)
chr5 (238-311)||(29573531-29573604)
chr5 (238-311)||(29574908-29574981)
chr5 (238-311)||(29576285-29576358)
chr5 (238-311)||(29577662-29577735)
chr5 (238-311)||(29579039-29579112)
chr5 (236-317)||(30509301-30509382)
chr5 (236-317)||(30549644-30549725)
chr5 (236-304)||(19506779-19506847)
chr5 (249-321)||(26261592-26261664)
chr5 (220-335)||(380666-380781)
chr5 (258-333)||(21084684-21084759)
chr5 (213-335)||(20207980-20208102)
chr5 (213-311)||(38358225-38358323)
chr5 (91-156)||(19338388-19338453)
chr5 (269-338)||(33385230-33385299)
chr5 (213-333)||(588265-588385)
chr5 (235-311)||(22437998-22438074)
chr5 (8-50)||(12825752-12825794)
chr5 (258-335)||(41590892-41590969)
chr5 (85-157)||(38358097-38358169)
chr5 (240-335)||(6050025-6050120)
chr5 (239-338)||(42260066-42260165)
chr5 (86-136)||(22174453-22174503)
chr5 (258-311)||(4297593-4297646)
chr5 (213-302)||(34481706-34481795)
chr5 (80-157)||(35122144-35122221)
chr5 (238-306)||(15861974-15862042)
chr5 (258-338)||(36256578-36256658)
chr5 (90-126)||(38708205-38708241)
chr5 (258-301)||(6885716-6885759)
chr5 (85-156)||(30509486-30509557)
chr5 (85-156)||(30549826-30549897)
chr5 (80-135)||(31864414-31864469)
chr5 (85-134)||(26262337-26262386)
chr5 (94-134)||(476852-476892)
chr5 (218-306)||(7962281-7962369)
[»] scaffold0472 (1 HSPs)
scaffold0472 (1-338)||(3798-4135)
[»] chr6 (49 HSPs)
chr6 (1-338)||(2554152-2554488)
chr6 (11-337)||(24766672-24766998)
chr6 (1-338)||(13938265-13938601)
chr6 (1-338)||(17605591-17605928)
chr6 (1-338)||(17576974-17577312)
chr6 (26-338)||(21629379-21629691)
chr6 (1-306)||(18681863-18682168)
chr6 (1-179)||(10576666-10576844)
chr6 (221-335)||(19350710-19350824)
chr6 (213-306)||(14843426-14843519)
chr6 (213-308)||(14686295-14686390)
chr6 (1-161)||(14372425-14372585)
chr6 (237-333)||(15956238-15956334)
chr6 (235-306)||(25351003-25351074)
chr6 (228-335)||(26206106-26206213)
chr6 (224-306)||(13086312-13086394)
chr6 (9-170)||(20882458-20882620)
chr6 (213-306)||(502821-502914)
chr6 (224-306)||(11060151-11060233)
chr6 (249-311)||(13563214-13563276)
chr6 (240-329)||(649339-649428)
chr6 (213-318)||(1104224-1104329)
chr6 (218-311)||(15674595-15674688)
chr6 (85-158)||(31292499-31292571)
chr6 (86-157)||(13086170-13086241)
chr6 (213-304)||(21549605-21549696)
chr6 (213-306)||(26514482-26514576)
chr6 (242-293)||(14372293-14372344)
chr6 (213-311)||(33640675-33640773)
chr6 (213-338)||(1307924-1308049)
chr6 (242-338)||(11469360-11469450)
chr6 (233-338)||(12673376-12673481)
chr6 (240-305)||(17078357-17078422)
chr6 (213-338)||(33753428-33753553)
chr6 (85-157)||(1104385-1104457)
chr6 (86-158)||(17228622-17228694)
chr6 (239-338)||(32186467-32186566)
chr6 (85-158)||(21549478-21549551)
chr6 (94-139)||(34434899-34434944)
chr6 (235-335)||(10362927-10363026)
chr6 (247-311)||(19616163-19616227)
chr6 (86-150)||(32197828-32197892)
chr6 (266-311)||(12687036-12687081)
chr6 (85-158)||(13413694-13413767)
chr6 (265-306)||(32198012-32198053)
chr6 (80-157)||(33805405-33805482)
chr6 (90-126)||(19616348-19616384)
chr6 (266-306)||(27104141-27104181)
chr6 (266-306)||(27145955-27145995)
[»] scaffold1350 (1 HSPs)
scaffold1350 (5-338)||(94-427)
[»] chr2 (44 HSPs)
chr2 (1-338)||(14440290-14440627)
chr2 (236-338)||(33515450-33515552)
chr2 (228-333)||(28253502-28253607)
chr2 (236-336)||(12646331-12646431)
chr2 (26-179)||(12646092-12646245)
chr2 (2-179)||(33515623-33515800)
chr2 (1-161)||(28253266-28253426)
chr2 (213-306)||(15018435-15018528)
chr2 (224-335)||(26146984-26147095)
chr2 (213-338)||(28399807-28399932)
chr2 (213-305)||(8065551-8065643)
chr2 (86-154)||(9668447-9668515)
chr2 (213-305)||(22724729-22724821)
chr2 (215-335)||(25380654-25380774)
chr2 (240-335)||(13551367-13551462)
chr2 (213-338)||(3153076-3153201)
chr2 (1-153)||(37445639-37445792)
chr2 (224-317)||(45422289-45422382)
chr2 (213-305)||(9668296-9668388)
chr2 (213-300)||(11197109-11197197)
chr2 (93-157)||(11233928-11233992)
chr2 (258-306)||(33583717-33583765)
chr2 (219-306)||(11233778-11233865)
chr2 (213-338)||(2207079-2207204)
chr2 (88-161)||(33583861-33583934)
chr2 (247-336)||(44028472-44028561)
chr2 (236-306)||(35488619-35488689)
chr2 (85-158)||(20004589-20004662)
chr2 (85-158)||(35488467-35488540)
chr2 (258-311)||(43311062-43311115)
chr2 (251-306)||(6824207-6824262)
chr2 (224-335)||(10689307-10689418)
chr2 (247-338)||(13416478-13416569)
chr2 (94-153)||(37437629-37437688)
chr2 (85-165)||(28399980-28400060)
chr2 (249-308)||(34357602-34357661)
chr2 (1-135)||(26146761-26146895)
chr2 (64-158)||(36804728-36804822)
chr2 (251-300)||(43722321-43722370)
chr2 (86-150)||(13550748-13550812)
chr2 (86-150)||(13551201-13551265)
chr2 (266-306)||(20946878-20946918)
chr2 (228-304)||(27335922-27335997)
chr2 (89-157)||(43722481-43722549)
[»] scaffold0016 (1 HSPs)
scaffold0016 (224-335)||(28543-28654)
[»] scaffold0189 (1 HSPs)
scaffold0189 (214-306)||(6850-6942)
[»] scaffold0112 (1 HSPs)
scaffold0112 (213-311)||(14945-15043)
[»] scaffold0418 (1 HSPs)
scaffold0418 (225-317)||(8374-8466)
[»] scaffold0007 (1 HSPs)
scaffold0007 (213-329)||(182873-182989)
[»] scaffold0179 (2 HSPs)
scaffold0179 (261-335)||(8338-8412)
scaffold0179 (261-311)||(13272-13322)
[»] scaffold0043 (1 HSPs)
scaffold0043 (213-274)||(33930-33991)
[»] scaffold0026 (1 HSPs)
scaffold0026 (224-293)||(67849-67918)
[»] scaffold0048 (1 HSPs)
scaffold0048 (213-306)||(63589-63681)
[»] scaffold1809 (1 HSPs)
scaffold1809 (258-302)||(1093-1137)
[»] scaffold0131 (1 HSPs)
scaffold0131 (240-317)||(3826-3903)
[»] scaffold0061 (1 HSPs)
scaffold0061 (258-335)||(55468-55545)
[»] scaffold0017 (1 HSPs)
scaffold0017 (258-335)||(143088-143165)


Alignment Details
Target: chr8 (Bit Score: 278; Significance: 1e-155; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 8300349 - 8300686
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8300349 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 8300448  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||    
T  8300449 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatactccttcctcatactcaaagtatcccacctaacccaaaata 8300548  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  8300549 tttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgccggagctttgaaaaaggaaagtgcata 8300648  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8300649 gacaggtagagcagtcaggacggactttagaagaatca 8300686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 7924932 - 7925269
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7924932 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 7925031  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  7925032 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatactccttcctcatactcaaagaatcccacctaacccaagata 7925131  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                |||||||||||||| | || |||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  7925132 tttttcttttttcctcaccccctccctagaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcata 7925231  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  7925232 gacaggtagagcagtcaggacagactttagaagaatca 7925269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 41664962 - 41664625
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  41664962 actccggcccccatcctccaaacctccatccgccacaccatacctagccactaacaccttcctccacaaagcctccctctccaataacaaccgccaacac 41664863  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  41664862 catttacccaacaaagcaatgttaaactctctcaacctcgtaacccccaaccctccatactccttcctcatactcaaagtatcccacctaacccaagata 41664763  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||    
T  41664762 tttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaatagattatacctgacggagctttgaaaaaggaaagtgcgta 41664663  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  41664662 gacaggtggagcagtcaggacggactttagtagaatca 41664625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 335
Target Start/End: Original strand, 9923147 - 9923481
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  9923147 actccggcccccatcctccaaacctccatccgccacaccatacctagccaccaacacctttctccacaaagcttccttctccaataacaaccgccaacac 9923246  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    |||||| |||||||||| |  |||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| || |    
T  9923247 catttatccaacaaagctaaattaaactctctcaacctcgtaacccccaaccctccatactccttcctcaaactcaaagtatcccacctaatccatgaaa 9923346  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                |||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  9923347 tttttcttttatcctcaccccctcccgaaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgtata 9923446  T
Q  301 gacaggtagagcagtcaggacggactttagaagaa 335  Q
    ||||||||||||||||| ||||||||| |||||||    
T  9923447 gacaggtagagcagtcaagacggacttaagaagaa 9923481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 42 - 338
Target Start/End: Original strand, 32267141 - 32267437
Alignment:
Q  42 acctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctctt 141  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||| ||| |    
T  32267141 acctagccactaacacctttctccacaaagcttccctctccaataacaaccgccaacaccatttacccaacaaagctatgttaaactctctcaatctcgt 32267240  T
Q  142 aacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggatannnnnnnnnnnncctcaccccctccccaaaagaatttatta 241  Q
    |||||||||||||||||||| ||||| || ||||||| |||||||||||||||| ||||            | ||||||||||||||||| || ||||||    
T  32267241 aacccccaaccctccatactccttccgcaaactcaaaatatcccacctaacccaagatatttttcttttttcttcaccccctccccaaaaaaaattatta 32267340  T
Q  242 aacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  32267341 aacaaagattcaatggaagagattatacctgacaaagctttgaaaaaggaaagtgcatagacaggtagagcagtcatgacggacttttgaagaatca 32267437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 172633 - 172457
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  172633 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaacgcatccctctccaataacaacctccagcac 172534  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaa 177  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  172533 catttacccaacaaagcaatgttaaactccctcaacctcttaaaccccaaccctccatactccttcctcatactcaa 172457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 20824845 - 20825162
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||  |||||| | ||||||||| |  |||| || | ||||| ||||||||||    
T  20824845 actccggcccccatcctccaaaccaccatcctccacgccatacctagccaacaacaccctactccacaaacctcccctatcaactaacagcctccaacac 20824944  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||| ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| | ||||||  | || || |  ||| | |||||| || |    
T  20824945 catttccccaacaaagcaatgttaaactctctcaacctcctaacacccaaccctccatactccctcctcaagcacacagaactccaaccaacccacgaaa 20825044  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttg-aaaaaggaaagtgcat 299  Q
                ||||||  || |||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||    
T  20825045 tctttcttttatcctcacatcccccccaaaaaaatttattaaacaaagattcaatagaagagattatacctgacggagctttgaaaaaaggaaagtgcat 20825144  T
Q  300 agacaggtagagcagtca 317  Q
    ||||||| || |||||||    
T  20825145 agacaggaagcgcagtca 20825162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 13879081 - 13878746
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||||||||| |||||| | | ||| ||  | || || || | |||||||| |||||||    
T  13879081 actctggcccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctacgccataacccctctctatcaactaacaaccgccaacac 13878982  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||| || | |||||||||||||||||  ||||| |||  ||| |||||||| ||||||| | |||||| || ||||| || ||| | |||||| ||||    
T  13878981 catttccctagcaaagcaatgttaaacttgctcaatctccgaacacccaaccccccatactccctcctcaaacacaaagaatgccaaccaacccacgata 13878882  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||  || ||| |||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13878881 tttttcttttttcctcacaacccccctaaaaaaatttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcata 13878782  T
Q  301 gacaggtagagcagtcaggacggactttagaagaat 336  Q
    |||||| || |||||||||||| | || ||||||||    
T  13878781 gacaggaagtgcagtcaggacgaatttgagaagaat 13878746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 17700026 - 17700363
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||   ||| |||||||||||||  |||||| | ||||||||| |  |||| || | ||||| || |||||||    
T  17700026 actccggcccccatcctccaaaccaccatctgtcactccatacctagccaagaacaccctactccacaaacctcccctatcaactaacagccgccaacac 17700125  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||| ||||||||||||||||||||||| ||||||||| | || |||||||||||||||| | |||||| || ||||| |   || | |||||| || |    
T  17700126 catttccccaacaaagcaatgttaaactctctcaacctcctcacacccaaccctccatactccctcctcaaacacaaagaacttcaaccaacccaagaaa 17700225  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||  || |||||||| |||||||| ||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  17700226 tctttcttttatcctcacaacccccccaaaaaaatttatttaacaaagattcaatagaagagattatatctgacggagctttgaaaaaggaaagtgcata 17700325  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    |||||| || ||||||| ||| || || ||||| ||||    
T  17700326 gacaggaagcgcagtcaagacagatttgagaagtatca 17700363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 25090934 - 25091082
Alignment:
Q  2 ctccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacacc 101  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||||||| |||||| | | ||||||  | || || || | |||||||| | ||||||    
T  25090934 ctccggcccccatcctccaaaccaccatccgccacaccatacatagccaccaacaccctacgccacaacccctctctatcaactaacaaccgctaacacc 25091033  T
Q  102 atttacccaacaaagcaatgttaaactccctcaacctcttaacccccaa 150  Q
    |||| || |||||||||||||||||||| ||||| ||| |||| |||||    
T  25091034 atttccctaacaaagcaatgttaaactctctcaatctcctaacacccaa 25091082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 224 - 335
Target Start/End: Original strand, 7453121 - 7453232
Alignment:
Q  224 ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacgg 323  Q
    |||||||| || |||||||| |||||||||| | |||||||||||||||| ||||||||||| || |||||||||||||||||||||| ||||| ||| |    
T  7453121 ccccaaaaaaaattattaaataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagtgcatagacaggtagagaagtcaagacag 7453220  T
Q  324 actttagaagaa 335  Q
    | |||| |||||    
T  7453221 attttaaaagaa 7453232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 40 - 306
Target Start/End: Complemental strand, 42177110 - 42176846
Alignment:
Q  40 atacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctc 139  Q
    |||||||||||| |||||| | | ||||||| ||||||| || | ||||||||  ||||| |||||  ||||||||| |||||||||||| ||||||| |    
T  42177110 atacctagccaccaacaccctacgccacaaaccatccctatcaactaacaaccgtcaacatcatttctccaacaaaggaatgttaaactctctcaacccc 42177011  T
Q  140 ttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggatannnnnnnnnnnncctcaccccctccccaaaagaatttat 239  Q
     |||| | || ||||||||||| | ||||||||| ||||| |  ||| | |||||| || |            ||||||  || |||||||| |||||||    
T  42177010 ctaacactcatccctccatactccctcctcatacacaaagaactccaaccaacccaaga-aatttttctttttcctcactacc-ccccaaaaaaatttat 42176913  T
Q  240 taaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    | |||||||||| |||| ||| ||||||||||||   ||||||||||||||||||||||||||||||    
T  42176912 ttaacaaagatttaatggaagggattatacctgaaaaagctttgaaaaaggaaagtgcatagacagg 42176846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 213 - 306
Target Start/End: Complemental strand, 29721293 - 29721200
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    |||||| |||||||||||| ||    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29721293 cctcactccctccccaaaaaaacaatttaaacatagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacagg 29721200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 10530458 - 10530538
Alignment:
Q  253 aatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaag 333  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||| ||||  |||||||| |||||||||||||||||    
T  10530458 aatggaagagattatacctgaaggagctttgaaaaaggaaagtgcataaacagaaagagcagttaggacggactttagaag 10530538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 236 - 311
Target Start/End: Original strand, 36157935 - 36158010
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  36157935 ttattaaacaaagattcaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagag 36158010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 213 - 335
Target Start/End: Original strand, 15539815 - 15539937
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||| ||||||||||||   ||||||||| | ||||||||||| ||| || |||||||||||||||||||| |||||||| ||||| ||||| ||||     
T  15539815 cctcactccctccccaaaattttttattaaaaatagattcaatgatagaaatgatacctgacggagctttgaagaaggaaagagcataaacaggcagaga 15539914  T
Q  313 agtcaggacggactttagaagaa 335  Q
     |||| ||| |||||||||||||    
T  15539915 ggtcaagacagactttagaagaa 15539937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 37434469 - 37434375
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaag 179  Q
    ||||| || |||||||||||| ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| | |||||| || |||||    
T  37434469 taacagccgccaacaccattttcccaacaaagcaatgttaaactctctcaacctcctaacacccaaccctccatactccctcctcaaacacaaag 37434375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 306
Target Start/End: Original strand, 23942845 - 23942938
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    |||||| ||| |||||||| || ||||| || |||||||||||| |||||||||||| ||| ||||||||||| |||||||| |||||||||||    
T  23942845 cctcactcccaccccaaaaaaaattattcaataaagattcaatggaagagattatacatgatggagctttgaagaaggaaagagcatagacagg 23942938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 86 - 166
Target Start/End: Original strand, 24794377 - 24794457
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttc 166  Q
    |||| |||||||||||||||||| ||||||||||  |||||||||||||| ||| ||||||||||||||||| ||| ||||    
T  24794377 aacatcctccaacaccatttacctaacaaagcaaaattaaactccctcaatctcctaacccccaaccctccagactccttc 24794457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 224 - 311
Target Start/End: Complemental strand, 4987436 - 4987349
Alignment:
Q  224 ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||||| || |||||||| |||||||||| |  ||| ||||||||||||||||||||||| || ||||| ||||||||||||||||    
T  4987436 ccccaaaaaaaattattaaataaagattcaagggtagaaattatacctgacggagctttgaagaaagaaagagcatagacaggtagag 4987349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 24794501 - 24794571
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    ||||| ||||||||||||||| |||||||||||||||| |||||||| || |||||||| |||||||||||    
T  24794501 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacagg 24794571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 6245864 - 6245961
Alignment:
Q  235 tttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaa 332  Q
    ||||||||| | | ||||||||| || |||||||||||||||||||||||| |||||||| ||||||||| |||  || |||||||| ||||| ||||    
T  6245864 tttattaaatataaattcaatgacagggattatacctgacggagctttgaagaaggaaagagcatagacaagtaacgcggtcaggacagacttaagaa 6245961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 18187903 - 18187995
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacag 305  Q
    |||||| |||||||||||| |||||||| || ||| ||| |||  |||||||| ||||||||||||||||||| | |||||| ||||||||||    
T  18187903 cctcacaccctccccaaaaaaatttattcaataaaaatttaatagaagagattgtacctgacggagctttgaagatggaaagagcatagacag 18187995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 11393857 - 11393786
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    ||||||||||||||||||||||| ||||| ||||  |||||||||||||| | | |||||||||||||||||    
T  11393857 aacaacctccaacaccatttacctaacaatgcaaaattaaactccctcaatcacctaacccccaaccctcca 11393786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 224 - 335
Target Start/End: Original strand, 12332617 - 12332728
Alignment:
Q  224 ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacgg 323  Q
    |||||||| |||||| |||| | ||| |||| | |||| ||||||||||| ||||| ||||| ||||| || ||||||||||||||||  |||| ||| |    
T  12332617 ccccaaaaaaatttagtaaaaatagagtcaagggaagaaattatacctgatggagccttgaagaaggagagagcatagacaggtagagaggtcaagacag 12332716  T
Q  324 actttagaagaa 335  Q
    ||||||||||||    
T  12332717 actttagaagaa 12332728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 213 - 288
Target Start/End: Complemental strand, 37165503 - 37165428
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaa 288  Q
    |||||| ||||||| |||| || | |||||| | |||||||||| |||||||||||||||||||||||||||||||    
T  37165503 cctcactccctcccaaaaaaaaataattaaaaatagattcaatggaagagattatacctgacggagctttgaaaaa 37165428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 236 - 318
Target Start/End: Original strand, 6901718 - 6901800
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcag 318  Q
    ||||||||  ||||||||||| |||||||||||||| | ||||||||||| |||||||| ||||||||| | |||| ||||||    
T  6901718 ttattaaatgaagattcaatggaagagattatacctaatggagctttgaagaaggaaagggcatagacatgcagagaagtcag 6901800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 11393690 - 11393620
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    ||||| ||||||||||||||| |||||||||||||||| |||||||| || || ||||| |||||||||||    
T  11393690 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaatgaaagagcatagacagg 11393620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 12341361 - 12341447
Alignment:
Q  249 attcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    |||||||| ||||||||||||| ||| ||||||||||||||||||| || |||||||| ||||  | || ||||||||| |||||||    
T  12341361 attcaatggaagagattatacccgacagagctttgaaaaaggaaagagcgtagacaggcagagaggacatgacggacttgagaagaa 12341447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 247 - 305
Target Start/End: Original strand, 25193880 - 25193938
Alignment:
Q  247 agattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacag 305  Q
    ||||||||||| |||||||||||||||| |||||||||| |||||||| ||||||||||    
T  25193880 agattcaatgatagagattatacctgacagagctttgaagaaggaaagagcatagacag 25193938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 26774621 - 26774515
Alignment:
Q  221 cctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcagga 320  Q
    ||||||||||| |||||||| || | | |||||||  |||||||||||| ||||||||||||||| ||||| || ||||||| |||||  | ||||||||    
T  26774621 cctccccaaaaaaatttatttaaaagatattcaatagaagagattatacatgacggagctttgaagaaggagagagcatagataggtaacgaagtcagga 26774522  T
Q  321 cggactt 327  Q
    | |||||    
T  26774521 cagactt 26774515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 335
Target Start/End: Original strand, 36493184 - 36493261
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    |||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||  |||| ||| |||||||| ||||    
T  36493184 aagaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttaggagaa 36493261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 213 - 299
Target Start/End: Complemental strand, 43249186 - 43249100
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcat 299  Q
    |||||| ||| ||| |||| || ||||| |||||||||||||||||||||||||||||||| ||| |||| || ||| |||| ||||    
T  43249186 cctcactccccccctaaaaaaaattattcaacaaagattcaatgaaagagattatacctgatggaactttaaagaagaaaagagcat 43249100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 91 - 157
Target Start/End: Complemental strand, 43249308 - 43249243
Alignment:
Q  91 cctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    |||||||||||||||||| ||||||||||  |||||||| ||||||||| ||| |||||||||||||    
T  43249308 cctccaacaccatttacctaacaaagcaaaattaaactctctcaacctcctaa-ccccaaccctcca 43249243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 236 - 318
Target Start/End: Complemental strand, 43612544 - 43612462
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcag 318  Q
    ||||| || |||||||||||| |||||||||||||||| |||||||| || || ||||| ||||||||| | |||| ||||||    
T  43612544 ttattcaataaagattcaatggaagagattatacctgatggagctttcaagaatgaaagggcatagacatgaagagaagtcag 43612462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 17659626 - 17659715
Alignment:
Q  240 taaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggacttta 329  Q
    |||| ||||| |||||| |||||||||||| ||| |||||||| || |||||||| ||||||||||| | ||  |||||||| |||||||    
T  17659626 taaataaagaatcaatggaagagattatacttgatggagcttttaagaaggaaagcgcatagacaggcaaagaggtcaggacagacttta 17659715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 213 - 294
Target Start/End: Original strand, 36025279 - 36025360
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaag 294  Q
    |||||| |||||||||||    ||||||||| | ||| | |||| |||||||||||||||||||||||||||| ||||||||    
T  36025279 cctcactccctccccaaatttttttattaaaaatagagttaatggaagagattatacctgacggagctttgaagaaggaaag 36025360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 213 - 338
Target Start/End: Complemental strand, 41691142 - 41691017
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||||||| |||||||| | |||| | || | |||||||||| |||||||||||||||  |||||| ||||||| ||||| |  |||||||| || |     
T  41691142 cctcacccccaccccaaaatattttaattaaaatagattcaatggaagagattatacctgcgggagctctgaaaaaagaaagggtgtagacaggcagtga 41691043  T
Q  313 agtcaggacggactttagaagaatca 338  Q
    || |||||| ||||| || |||||||    
T  41691042 agacaggacagacttaaggagaatca 41691017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 18187776 - 18187824
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctc 133  Q
    |||||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  18187776 taacaatctccaacaccatttacctaacaaagcagtgttaaactccctc 18187824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 43271008 - 43271151
Alignment:
Q  26 ccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaa 125  Q
    |||||| ||||||||||||||||||  |||||| | | ||||||| || || | ||   |||||||| |||||||||||| ||||  |  | ||||||||    
T  43271008 ccatccgccacaccatacctagccatcaacaccctacaccacaaaccacccatatcatctaacaaccgccaacaccatttccccagtagggaaatgttaa 43271107  T
Q  126 actccctcaacctcttaacccccaaccctccatacttcttcctca 170  Q
    |||| ||||||||| |||| ||||| |||||||||| | ||||||    
T  43271108 actctctcaacctcctaacacccaa-cctccatactccctcctca 43271151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 245 - 304
Target Start/End: Original strand, 12135013 - 12135072
Alignment:
Q  245 aaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
    |||||||||||| ||||||||||||| || | |||||| || ||||||||||||||||||    
T  12135013 aaagattcaatggaagagattatacccgatgaagctttaaagaaggaaagtgcatagaca 12135072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 4992056 - 4991987
Alignment:
Q  235 tttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
    ||||||||| | ||||||| || ||||||||||| ||||| |||||||||| ||||||||  ||||||||    
T  4992056 tttattaaaaatagattcagtggaagagattatatctgacagagctttgaagaaggaaagatcatagaca 4991987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 242 - 311
Target Start/End: Complemental strand, 16375456 - 16375387
Alignment:
Q  242 aacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    ||||||||||||||  | |||||||||||||  |||| |||||| |||||||||| ||||||||| ||||    
T  16375456 aacaaagattcaatagaggagattatacctgttggaggtttgaagaaggaaagtgtatagacaggcagag 16375387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 23942717 - 23942790
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccat 158  Q
    |||||||||||||||||||||||| |  |||||||  ||||||||| ||||| || | |||||||| |||||||    
T  23942717 taacaacctccaacaccatttacctagtaaagcaacattaaactccttcaacttcctgacccccaaacctccat 23942790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 45255207 - 45255130
Alignment:
Q  228 aaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacag 305  Q
    |||| |||||| |||| |||||   |||| |||||||||||||||| ||||||||||| || ||||| ||||||||||    
T  45255207 aaaaaaatttaataaataaagaactaatggaagagattatacctgatggagctttgaagaatgaaagcgcatagacag 45255130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 25320442 - 25320514
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccat 158  Q
    |||| ||||||||||||||| |||||||||| ||  |||||||| || |||| | ||||||||||||| ||||    
T  25320442 aacatcctccaacaccattttcccaacaaagaaaaattaaactctcttaaccgcctaacccccaaccccccat 25320514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 12332469 - 12332532
Alignment:
Q  76 cctctccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctc 139  Q
    |||||||| ||| || | |||||||||||| || ||||| ||||| ||||||||||||||||||    
T  12332469 cctctccactaataaacgccaacaccatttgcctaacaacgcaatattaaactccctcaacctc 12332532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 327
Target Start/End: Complemental strand, 14345291 - 14345188
Alignment:
Q  224 ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacgg 323  Q
    |||||||| |||||||| |  |||||||  ||| ||||||||||| |||| ||||  ||||| |||||||| ||||||||||  |||| ||| ||||| |    
T  14345291 ccccaaaaaaatttattcagtaaagattttatggaagagattatatctgatggagtcttgaagaaggaaagagcatagacagacagagtagttaggacag 14345192  T
Q  324 actt 327  Q
    ||||    
T  14345191 actt 14345188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 16048425 - 16048350
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatact 161  Q
    |||| |||||||||||||||||| || | ||| |||||||||||||||| |  | ||  |||||||||||||||||    
T  16048425 aacatcctccaacaccatttacctaaaagagccatgttaaactccctcatctgcctagtccccaaccctccatact 16048350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 311
Target Start/End: Complemental strand, 28453805 - 28453754
Alignment:
Q  260 gagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||||||||||| |||||||||||||| ||||| || |||||||| ||||    
T  28453805 gagattatacctgagggagctttgaaaaaagaaagggcgtagacaggcagag 28453754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 38046908 - 38046951
Alignment:
Q  5 cggcccccatcctccaaaccgccatcctccacaccatacctagc 48  Q
    ||||||||||||||||| |  |||||||||||||||||||||||    
T  38046908 cggcccccatcctccaacctcccatcctccacaccatacctagc 38046951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 335
Target Start/End: Original strand, 5585447 - 5585569
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||| ||| ||| |||| || ||||| || | |||||||||| |||||||||||| ||| ||||| ||||| ||| | || ||||||||| | || |     
T  5585447 cctcactcccccccaaaaaaaaattattcaatatagattcaatggaagagattatacatgatggagccttgaagaagaacagagcatagacaagaagtgt 5585546  T
Q  313 agtcaggacggactttagaagaa 335  Q
    ||| || | ||||||||||||||    
T  5585547 agttagaatggactttagaagaa 5585569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 5585751 - 5585821
Alignment:
Q  265 tatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    ||||| ||| ||||| ||||| ||||| || ||||||||||| || ||||| ||||||||||| |||||||    
T  5585751 tatacatgatggagccttgaagaaggacagagcatagacaggaagtgcagttaggacggacttcagaagaa 5585821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 28992556 - 28992510
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
    |||||||||||||||||||  ||||||| |||||||| |||||||||    
T  28992556 aagagattatacctgacgggactttgaagaaggaaagagcatagaca 28992510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 42452011 - 42451941
Alignment:
Q  224 ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaag 294  Q
    |||||||| ||| | ||||| | |||||||||  |||| ||||||||||  ||||||||||||||||||||    
T  42452011 ccccaaaaaaatcttttaaaaatagattcaatagaagaaattatacctgcaggagctttgaaaaaggaaag 42451941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 224 - 318
Target Start/End: Complemental strand, 43611562 - 43611468
Alignment:
Q  224 ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcag 318  Q
    |||||||| || ||||| || ||||||| |||| ||||||||||||||||  || ||||||| ||  |||  ||||||||||| |||| ||||||    
T  43611562 ccccaaaaaaaattattcaataaagatttaatggaagagattatacctgatagaactttgaagaataaaaaggcatagacaggaagagaagtcag 43611468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 294
Target Start/End: Complemental strand, 10801035 - 10800962
Alignment:
Q  221 cctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaag 294  Q
    |||||||||||||| ||| |||| ||||| ||||    ||| || |||||||| ||||||||||||||||||||    
T  10801035 cctccccaaaagaaattaataaataaagagtcaagagtagaaatgatacctgagggagctttgaaaaaggaaag 10800962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 26774757 - 26774708
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctca 134  Q
    ||||| |||||||||||||||  | |||||||||||| ||||||||||||    
T  26774757 taacatcctccaacaccattttgctaacaaagcaatggtaaactccctca 26774708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 238 - 294
Target Start/End: Original strand, 8445596 - 8445652
Alignment:
Q  238 attaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaag 294  Q
    |||||| | |||||||||| |||| || |||||||| ||||||||||| ||||||||    
T  8445596 attaaatatagattcaatggaagaaatgatacctgaaggagctttgaagaaggaaag 8445652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 16839224 - 16839160
Alignment:
Q  247 agattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||||||  | |||||||||||||  ||||| |||||||| ||||| ||||| ||||||||||    
T  16839224 agattcaatagaggagattatacctgctggagccttgaaaaaagaaagcgcataaacaggtagag 16839160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 40366279 - 40366343
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaa 150  Q
    |||| |||||||||||||||||| |||| | | |  |||||||||||||||| | ||||||||||    
T  40366279 aacatcctccaacaccatttaccaaacagaaccacattaaactccctcaaccgcctaacccccaa 40366343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 270; Significance: 1e-150; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 105437 - 105100
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  105437 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 105338  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  105337 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatactccttcctcatactcaaagaatcccacctaacccaagata 105238  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  105237 tttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcata 105138  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  105137 gacaggtagagcagtcaggacagactttagaagaatca 105100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 270; Significance: 1e-150; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 4937722 - 4937385
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4937722 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 4937623  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  4937622 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatactccttcctcatactcaaagaatcccacctaacccaagata 4937523  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  4937522 tttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcata 4937423  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  4937422 gacaggtagagcagtcaggacagactttagaagaatca 4937385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 11276842 - 11276505
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  11276842 actccgggccccatcctccaaacctccatccgccacaccatacctagccactaacacctttctccacaaagcttccctctccaataacaaccgccaacac 11276743  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || |||||||||||||||||||||||| ||||    
T  11276742 catttacccaccaaagcaatgttaaactccctcaacctcgtaacccccaaccctccatactccttccgcaaactcaaagtatcccacctaacccaagata 11276643  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11276642 tttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcata 11276543  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    |||||||||||||||||||||||||||||| |||||||    
T  11276542 gacaggtagagcagtcaggacggactttaggagaatca 11276505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 29968520 - 29968857
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||| ||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  29968520 actccggcccgcatcctccaaacctccatccgccacgccatacctagccactaacacctttctccacaaagcttccctctccaataacaaccgccaacac 29968619  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    |||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||| ||||| || |||||||||||||||||||||||| ||||    
T  29968620 catttacccaacaaagcaatattaaactccctcaatctcgtaacccccaaccctccatactccttccgcagactcaaagtatcccacctaacccaagata 29968719  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  29968720 tttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcata 29968819  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29968820 gacaggtagagcagtcaggacggactttagaagaatca 29968857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 335
Target Start/End: Original strand, 17721181 - 17721515
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  17721181 actccggcccccatcctccaaacctccatccgccacaccatacctagccaccaacacctttctccacaaagcttccttctccaataacaaccgccaacac 17721280  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||||||||||||||| |  |||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| || |    
T  17721281 catttacccaacaaagctaaattaaactctctcaacctcgtaacccccaaccctccatactccttcctcaaactcaaagtatcccacctaatccatgaaa 17721380  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17721381 tttttcttttatcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcata 17721480  T
Q  301 gacaggtagagcagtcaggacggactttagaagaa 335  Q
    |||||||||||||||||||||| |||| |||||||    
T  17721481 gacaggtagagcagtcaggacgaacttaagaagaa 17721515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 235032 - 234842
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||| |||||||    
T  235032 actccggcccccatcctccaaacctccatccgccacaccatacctagccactaacacctttcgccacaaagcttctctctccaataacaaccaccaacac 234933  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaa 191  Q
    |||||||||||||||||||| |||||||| | ||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  234932 catttacccaacaaagcaatattaaactctcgcaacctcgtaactcccaaccctccatactccttcctcatactcaaagtatcccacctaa 234842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 31423148 - 31423434
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||| ||||||||| ||||||||| |||||| | | ||||||| ||||||| || | |||||||| |||||||    
T  31423148 actccggcccccatcctccaaaccaccatccgccacaccatgcctagccaccaacaccctacgccacaaaccatccctatcaactaacaaccgccaacac 31423247  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||| |||||||||||| |||||||||| ||||||||| |||| |||| |||||||       |||||| || ||||| || | | | |||||| || |    
T  31423248 catttccccaacaaagcactgttaaactctctcaacctcctaacacccatccctcca-------tcctcagacacaaagaattctaaccaacccaagaaa 31423340  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagt 295  Q
                ||||||  || |||||||| || ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31423341 tttttcttttttcctcactacc-ccccaaaaaaaattatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagt 31423434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 47877536 - 47877666
Alignment:
Q  9 ccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacaccatttacc 108  Q
    |||||||||||||||| |||||| ||||||||||||||||||| ||||||| || ||||||||| ||||||||||||||||||| ||||||||||||| |    
T  47877536 ccccatcctccaaacctccatccgccacaccatacctagccaccaacacctgtcgccacaaagcttccctctccaataacaaccgccaacaccatttatc 47877635  T
Q  109 caacaaagcaatgttaaactccctcaacctc 139  Q
    |||||||||||| |||||||| |||||||||    
T  47877636 caacaaagcaatattaaactctctcaacctc 47877666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 39931190 - 39931021
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||| |||||| | | ||||||| |||| | ||||| |||||| | |||||||    
T  39931190 actccggcccccatcctccaaccgcccatcctccacaccatacctagccaccaacaccctacaccacaaatcatcaccctccactaacaaacgccaacac 39931091  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctca 170  Q
    |||||||| |||| |||||| |||| ||||||||||||| ||||||||||||||||||||| ||| ||||    
T  39931090 catttacctaacagagcaatattaagctccctcaacctcctaacccccaaccctccatactcctttctca 39931021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 221 - 335
Target Start/End: Complemental strand, 27218496 - 27218382
Alignment:
Q  221 cctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcagga 320  Q
    ||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| ||||| |||||||||||||||||| | || | ||||| ||    
T  27218496 cctccccaaaaaaatttattaaacaaagattcaatgagagaaattatacctgacggagccttgaagaaggaaagtgcatagacatgaagcgaagtcaaga 27218397  T
Q  321 cggactttagaagaa 335  Q
    | ||||| |||||||    
T  27218396 cagacttaagaagaa 27218382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 36364089 - 36364231
Alignment:
Q  28 atcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaaac 127  Q
    |||||||||||| || |||||||| |||||| | | || |||| |||  | ||||| |||||| | |||||||||||||| |||||||||||| ||||||    
T  36364089 atcctccacaccttaactagccaccaacaccctacgccccaaaccattaccctccactaacaaacgccaacaccatttactcaacaaagcaatattaaac 36364188  T
Q  128 tccctcaacctcttaacccccaaccctccatacttcttcctca 170  Q
    |||||||| ||| ||||||||||||| ||||||| ||| ||||    
T  36364189 tccctcaatctcctaacccccaacccaccatactcctttctca 36364231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 37255304 - 37255418
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||||||||| |||||| | | || |||| ||||||| || | |||||||| ||||||     
T  37255304 actccagcccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctacgccccaaaccatccctatcaactaacaaccgccaacat 37255403  T
Q  101 catttacccaacaaa 115  Q
    ||||| |||||||||    
T  37255404 catttccccaacaaa 37255418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 23054320 - 23054254
Alignment:
Q  245 aaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||||||||| ||||||||||||||||| ||||||| || |||||||||||||||||||||||||    
T  23054320 aaagattcaatggaagagattatacctgacagagctttaaagaaggaaagtgcatagacaggtagag 23054254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 306
Target Start/End: Original strand, 19735288 - 19735369
Alignment:
Q  225 cccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    ||||||| || ||||| ||||||||||||||| |||||||||||||||| |||||||| || |||||||| |||||||||||    
T  19735288 cccaaaaaaaattattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacagg 19735369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 317
Target Start/End: Original strand, 46626591 - 46626684
Alignment:
Q  224 ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtca 317  Q
    |||||||| || |||||||| |||||||||| | ||||||||||| |||| ||||||||||| || ||||| |||||||||||||||| |||||    
T  46626591 ccccaaaaaaaattattaaataaagattcaagggaagagattatatctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 46626684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 213 - 317
Target Start/End: Complemental strand, 36227533 - 36227429
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||| ||| |||||||| || ||||| |  |||||||||||| |||| ||||||||||| ||||||||||| || ||||| ||||||||||||||||     
T  36227533 cctcactcccaccccaaaaaaaattattcattaaagattcaatggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagaga 36227434  T
Q  313 agtca 317  Q
    |||||    
T  36227433 agtca 36227429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 22819099 - 22819001
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||| ||| ||||||||||||||  ||||||||||||||| |  ||| | ||||||||| |||||| |||| |||||||||||||||||||| ||||    
T  22819099 cctcacacccaccccaaaagaattttataaacaaagattcaagggtagaaagtatacctgatggagctctgaagaaggaaagtgcatagacaggaagag 22819001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 228 - 329
Target Start/End: Original strand, 34232474 - 34232575
Alignment:
Q  228 aaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactt 327  Q
    |||| |||||| |||| ||||| |||||| |||||||||||||||| ||||||||||| |||||||| ||||||||| | ||||  ||||| || |||||    
T  34232474 aaaaaaatttaataaataaagaatcaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacaagcagagaggtcagaacagactt 34232573  T
Q  328 ta 329  Q
    ||    
T  34232574 ta 34232575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 41340330 - 41340398
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
    |||||||| |||||||||||| |||||||||||||| ||| ||||||||| |||||||| |||||||||    
T  41340330 ttattaaataaagattcaatggaagagattataccttacgaagctttgaagaaggaaagggcatagaca 41340398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 13553693 - 13553626
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccc 153  Q
    |||| |||||||||||||||| | ||||||||||  |||||||||||||||||| |||||||||||||    
T  13553693 aacatcctccaacaccatttatctaacaaagcaaaattaaactccctcaacctcctaacccccaaccc 13553626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 236 - 311
Target Start/End: Original strand, 45993357 - 45993432
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||||| |||||||||| |  ||||||||||||||||||||||||||| || ||||| ||||||||||| ||||    
T  45993357 ttattaaataaagattcaagggtagagattatacctgacggagctttgaagaaagaaagagcatagacaggcagag 45993432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 338
Target Start/End: Original strand, 4164797 - 4164922
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||| ||| |||||||| |||||| | || | |||||||||| |||||||||||||||  |||||| ||||||| ||||| || |||||||| || |     
T  4164797 cctcactcccaccccaaaaaaatttaattaaaatagattcaatggaagagattatacctgcgggagctctgaaaaaagaaagggcgtagacaggcagcga 4164896  T
Q  313 agtcaggacggactttagaagaatca 338  Q
    || |||||| ||||| || |||||||    
T  4164897 agacaggacagacttaaggagaatca 4164922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 338
Target Start/End: Original strand, 34207088 - 34207213
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||| ||| |||||||| |||||| | || | |||||||||| |||||||||||||||  |||||| ||||||| ||||| || |||||||| || |     
T  34207088 cctcactcccaccccaaaaaaatttaattaaaatagattcaatggaagagattatacctgcgggagctctgaaaaaagaaagggcgtagacaggcagcga 34207187  T
Q  313 agtcaggacggactttagaagaatca 338  Q
    || |||||| ||||| || |||||||    
T  34207188 agacaggacagacttaaggagaatca 34207213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 214 - 338
Target Start/End: Complemental strand, 33820940 - 33820816
Alignment:
Q  214 ctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagca 313  Q
    ||||| ||||||||||||   ||| ||||| | | |||||||| ||||||| |||||||| ||||||||||| ||||||||  |||||| ||| ||||      
T  33820940 ctcactccctccccaaaaatttttgttaaaaataaattcaatggaagagataatacctgatggagctttgaagaaggaaagaacatagataggcagagag 33820841  T
Q  314 gtcaggacggactttagaagaatca 338  Q
    |||||||| || || ||||||||||    
T  33820840 gtcaggacagaattgagaagaatca 33820816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 311
Target Start/End: Original strand, 4078058 - 4078133
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||||| ||||||||||   |||||||||||||||| |||||| |||| |||||||| ||||||||||| ||||    
T  4078058 ttattaaataaagattcaaaagaagagattatacctgatggagctctgaagaaggaaagcgcatagacaggcagag 4078133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 338
Target Start/End: Complemental strand, 6335740 - 6335649
Alignment:
Q  247 agattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatca 338  Q
    |||||| ||| |||||||| ||| ||  ||||| ||||| |||||||| |||||||||||||  ||||||| ||| ||||||||||||||||    
T  6335740 agattctatggaagagattgtacatgctggagccttgaagaaggaaagagcatagacaggtaacgcagtcaagacagactttagaagaatca 6335649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 304
Target Start/End: Original strand, 29917010 - 29917069
Alignment:
Q  245 aaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
    |||||||||||  |||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  29917010 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 29917069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 335
Target Start/End: Complemental strand, 41805130 - 41805019
Alignment:
Q  224 ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacgg 323  Q
    |||||| | |||||| |||| | ||| |||| | |||| ||||||||||||| ||| ||||| ||||| || ||||||||||||||||  |||| ||| |    
T  41805130 ccccaacaaaatttagtaaaaatagagtcaagggaagaaattatacctgacgaagccttgaagaaggagagagcatagacaggtagagaggtcaagacag 41805031  T
Q  324 actttagaagaa 335  Q
    ||||||||||||    
T  41805030 actttagaagaa 41805019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 18768166 - 18768264
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||| ||| ||||| || || ||||| || |||||||||||| |||||||||||| ||  ||||||||||| || ||||| ||||||||||| ||||    
T  18768166 cctcactcccaccccagaaaaaattattcaataaagattcaatggaagagattatacttgttggagctttgaagaaagaaagagcatagacaggcagag 18768264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 235 - 321
Target Start/End: Original strand, 45871543 - 45871629
Alignment:
Q  235 tttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggac 321  Q
    ||||||||| | |||||||||  |||| || |||||||| ||||||||||| |||||||| ||||| |||||||||| || ||||||    
T  45871543 tttattaaatatagattcaatagaagaaataatacctgaaggagctttgaagaaggaaagagcataaacaggtagagaagacaggac 45871629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 218 - 311
Target Start/End: Original strand, 13440821 - 13440914
Alignment:
Q  218 ccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    ||||| || ||||| || ||| |||||||||| |||||  | |||||||||||||  ||||||||||| |||||||| ||||||||||| ||||    
T  13440821 cccccccctcaaaaaaaattaataaacaaagaatcaatagaggagattatacctgctggagctttgaagaaggaaagcgcatagacaggcagag 13440914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 236 - 305
Target Start/End: Original strand, 18671952 - 18672021
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacag 305  Q
    |||||||| |||||||||||| ||||||||||||||||   ||||||||| ||||||||  |||||||||    
T  18671952 ttattaaataaagattcaatggaagagattatacctgatatagctttgaagaaggaaagatcatagacag 18672021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 311
Target Start/End: Original strand, 4344630 - 4344706
Alignment:
Q  235 tttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    ||||||||||| |||||||||  |||||||||||| ||| ||||||||||||||| |||  ||||| ||| ||||||    
T  4344630 tttattaaacatagattcaatagaagagattatacatgagggagctttgaaaaagaaaatggcatatacaagtagag 4344706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 18768038 - 18768110
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    ||||| |||||||||||||||||| |  |||||||| ||||||||| |||| ||| |||||||||| ||||||    
T  18768038 taacatcctccaacaccatttacctagtaaagcaatattaaactccttcaatctcctaacccccaaacctcca 18768110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 45164884 - 45164804
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatca 338  Q
    |||||||| ||||||  ||||| ||||| |||||||| |||||||||||||| || |||| ||| ||||||| ||||||||    
T  45164884 aagagattgtacctgctggagccttgaagaaggaaagagcatagacaggtagcgcggtcaagacagactttaaaagaatca 45164804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 247 - 304
Target Start/End: Complemental strand, 2820069 - 2820012
Alignment:
Q  247 agattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
    |||||||||  ||||||||||||||||||| |||||||| ||||||||  ||||||||    
T  2820069 agattcaatagaagagattatacctgacggggctttgaagaaggaaagaacatagaca 2820012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 9895532 - 9895604
Alignment:
Q  89 aacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatact 161  Q
    |||||||||||||||||||| | |||| |||| ||||| ||||| ||| || | ||| |||||||||||||||    
T  9895532 aacctccaacaccatttacctagcaaatcaatattaaattcccttaacttcctcaccgccaaccctccatact 9895604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 245 - 305
Target Start/End: Complemental strand, 28173333 - 28173273
Alignment:
Q  245 aaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacag 305  Q
    |||||||||||| ||||||| ||| |||||||||||||||| ||  |||| ||||||||||    
T  28173333 aaagattcaatggaagagataatatctgacggagctttgaagaaaaaaagagcatagacag 28173273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 34457659 - 34457595
Alignment:
Q  94 ccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccat 158  Q
    ||||||||||||||| |  |||||||| ||||||||| |||| ||| |||||||||| |||||||    
T  34457659 ccaacaccatttacctagtaaagcaatattaaactccttcaatctcctaacccccaaacctccat 34457595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 45844855 - 45844795
Alignment:
Q  90 acctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaa 150  Q
    ||||||||||||||||  |||| | |||||||||||||||| |||||||| | ||||||||    
T  45844855 acctccaacaccattttgccaaaagagcaatgttaaactccttcaacctcgttacccccaa 45844795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 292
Target Start/End: Original strand, 34104235 - 34104314
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaa 292  Q
    |||||| ||||||||||||   | ||||||| | ||||||||||| ||| || |||| ||||||||||||||| ||||||    
T  34104235 cctcacgccctccccaaaattttgtattaaaaatagattcaatgatagaaatgatacttgacggagctttgaagaaggaa 34104314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 39930933 - 39930878
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagca 313  Q
    |||||||||||| ||| ||||||||||| |||||||| ||||||||| | ||||||    
T  39930933 aagagattatacatgatggagctttgaagaaggaaagagcatagacatgcagagca 39930878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 91 - 157
Target Start/End: Original strand, 23887719 - 23887785
Alignment:
Q  91 cctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    ||||||||||||||| || |||||||| || |||||||||||||||    | |||||||||||||||    
T  23887719 cctccaacaccattttcctaacaaagctatattaaactccctcaactgtctgacccccaaccctcca 23887785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 91 - 157
Target Start/End: Original strand, 23898895 - 23898961
Alignment:
Q  91 cctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    ||||||||||||||| || |||||||| || |||||||||||||||    | |||||||||||||||    
T  23898895 cctccaacaccattttcctaacaaagctatattaaactccctcaactgtctgacccccaaccctcca 23898961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 327
Target Start/End: Original strand, 45460070 - 45460184
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||||||| |||||||| |||||| | || | ||||| ||||  ||||||||||||||  |||||| ||||||| ||||| || || ||||| || |     
T  45460070 cctcacccccaccccaaaaaaatttaattaaaatagattaaatggtagagattatacctgcgggagctctgaaaaaagaaagggcgtatacaggcagtga 45460169  T
Q  313 agtcaggacggactt 327  Q
    || |||||| |||||    
T  45460170 agacaggacagactt 45460184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 11341427 - 11341500
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagc-aatgttaaactccctcaacctcttaacccccaaccctccat 158  Q
    |||| ||||||||||||||| || |||| ||| ||  |||||||||||||||| | |||||||||| |||||||    
T  11341427 aacatcctccaacaccattttcctaacatagctaaaattaaactccctcaaccgcgtaacccccaaacctccat 11341500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 17056163 - 17056224
Alignment:
Q  89 aacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaa 150  Q
    |||||||||||||||||||| |||| || ||  ||||||||||||| |||| | ||||||||    
T  17056163 aacctccaacaccatttacctaacagagaaacattaaactccctcatcctcctcacccccaa 17056224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 23811618 - 23811667
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctca 134  Q
    |||||||||||| ||||||||| | ||||||| |||||||||||| ||||    
T  23811618 taacaacctccagcaccatttatctaacaaagaaatgttaaactctctca 23811667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 25018639 - 25018562
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    |||| ||||||||||||| ||| ||||| ||||||||  |||||| ||||| ||  |||| ||| |||||||||||||    
T  25018639 aagaaattatacctgacgaagccttgaagaaggaaagaacatagataggtaaagaggtcaagacagactttagaagaa 25018562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 19735149 - 19735221
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctc-ttaacccccaaccctcca 157  Q
    |||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||| | ||||| ||||||||||    
T  19735149 aacatcctccaacaccatttacctaacaatgcaaaattaaacttcctcaatctcgtaaaccctcaaccctcca 19735221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 219 - 311
Target Start/End: Complemental strand, 28740311 - 28740219
Alignment:
Q  219 cccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    ||||||||||||| ||  |||| || | |||||||||  | | |||||||||| | ||||||||||| |||||||| ||||| ||||| ||||    
T  28740311 cccctccccaaaaaaaaatatttaaaatagattcaatagatgggattatacctaagggagctttgaagaaggaaagagcataaacaggcagag 28740219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 34792004 - 34791964
Alignment:
Q  266 atacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    |||||||| ||||||||||| |||||||| |||||||||||    
T  34792004 atacctgagggagctttgaagaaggaaagggcatagacagg 34791964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 270; Significance: 1e-150; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 23642185 - 23641848
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23642185 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 23642086  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  23642085 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatactccttcctcatactcaaagaatcccacctaacccaagata 23641986  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  23641985 tttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcata 23641886  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  23641885 gacaggtagagcagtcaggacagactttagaagaatca 23641848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 23647843 - 23647506
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23647843 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 23647744  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  23647743 catttatccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatactccttcctcatactcaaagaatcccacctaacccaagata 23647644  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  23647643 tttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcata 23647544  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  23647543 gacaggtagagcagtcaggacagactttagaagaatca 23647506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 47419350 - 47419687
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  47419350 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaacaacaacctccaacac 47419449  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    |||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||| ||| |||||||||||||||||||||||| |||||||| ||||    
T  47419450 catttacctaacaaagcaatgttaaactccctcagcctctgaacccccaaccctccaaactccttcctcatactcaaagtatcccatctaacccaagata 47419549  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||    
T  47419550 tttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggagagtgcata 47419649  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    |||||| |||||||||||||| |||||||| |||||||    
T  47419650 gacagggagagcagtcaggaccgactttagtagaatca 47419687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 1828134 - 1827797
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||| |||||||    
T  1828134 actccggcccccatccgccaaacctccatcctccacaccatacctagccactaacaccttcctccacaaaacatccttctccaataacaaccgccaacac 1828035  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    |||||| ||||||||| |||||||||||| ||||||||| |||||||||  |||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  1828034 catttatccaacaaagaaatgttaaactctctcaacctcgtaacccccagtcctccatactccttcctcatactcaaagtatcccacctaacccaagata 1827935  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1827934 tttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcata 1827835  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    |||||| |||||||||||||||||||||||||||||||    
T  1827834 gacaggaagagcagtcaggacggactttagaagaatca 1827797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 19755813 - 19756150
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  19755813 actccggcccccatcctccaaacctccatccgccacaccatacctagccactaacaccttcctccacaaagcttccctctccaataacaaccgccaacac 19755912  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    |||||| |||||||||||||||||||||| ||||||||  |||| |||||||||||||||| |||||||||||||||||||||||||||||||||  |||    
T  19755913 catttatccaacaaagcaatgttaaactctctcaaccttgtaacacccaaccctccatactccttcctcatactcaaagtatcccacctaacccaaaata 19756012  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||    
T  19756013 tttttattttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgacagagttttgaaaaaggaaagtgcata 19756112  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  19756113 gacaggtagcgcagtcaggacggactttagtagaatca 19756150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 19783993 - 19783656
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  19783993 actccggcccccatcctccaaacctccatccgccacaccatacctagccactaacaccttcctccacaaagcttccctctccaataacaaccgccaacac 19783894  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    |||||| |||||||||||||||||||||| ||||||||  |||| |||||||||||||||| |||||||||||||||||||||||||||||||||  |||    
T  19783893 catttatccaacaaagcaatgttaaactctctcaaccttgtaacacccaaccctccatactccttcctcatactcaaagtatcccacctaacccaaaata 19783794  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||    
T  19783793 tttttattttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgacagagttttgaaaaaggaaagtgcata 19783694  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  19783693 gacaggtagcgcagtcaggacggactttagtagaatca 19783656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 15740766 - 15741063
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||   |||||    
T  15740766 actccggcccccatccgccaaacctccatcctccacaccatacctagccactaacacctttctccacaaaacttccttctccaataacaaccgtaaacac 15740865  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    |||||||||||||||||||||||||||||  |||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  15740866 catttacccaacaaagcaatgttaaactctgtcaacctcgttacccccaaccctccatactccttcctcatactcaaagtatcccacctaacccaagata 15740965  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgca 298  Q
                ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15740966 tttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgca 15741063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 55725300 - 55724964
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |   ||| ||  |||| || || | ||||||||||||||||    
T  55725300 actccggcccccatcctccaaaccaccatcctccacaccatacctagccaccaacaccctataccataatccatctctatctactaacaacctccaacac 55725201  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||| || |||||||||| ||||||||| ||||||||| |||| |||||||||||||||| | |||||| || ||||| || ||| | || ||| || |    
T  55725200 catttccctaacaaagcaaagttaaactctctcaacctcctaacacccaaccctccatactccctcctcaaacacaaagaattccaaccaatccaagaaa 55725101  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||  || |||||||| |||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||  ||||    
T  55725100 tttttcttttttcctcactacc-ccccaaaaaaatttatttaacaaagattcaatggaagagattatacccgacggagctttgaaaaaggaaagaacata 55725002  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    |||||| ||  || | |||||||| || ||||||||||    
T  55725001 gacaggaagcacatttaggacggatttgagaagaatca 55724964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 1 - 336
Target Start/End: Original strand, 48312640 - 48312975
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| | | ||||||  | || || || | |||||||| | |||||    
T  48312640 actccggcccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctacgccacaacccctctctatcaactaacaaccgctaacac 48312739  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||| || | |||||||||||||||||| ||||| |||  ||| |||||||| ||||||| | |||||| || ||||| || ||| | ||||||  |||    
T  48312740 catttccctagcaaagcaatgttaaactctctcaatctccgaacacccaaccccccatactccctcctcaaacacaaagaatgccaaccaacccaaaata 48312839  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||  || |||||||| || ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  48312840 tttttcttttttcctcacaacccccccaaaaaaaattatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcata 48312939  T
Q  301 gacaggtagagcagtcaggacggactttagaagaat 336  Q
    |||||| || ||||||| |||| | || ||||||||    
T  48312940 gacaggaagtgcagtcatgacgaatttgagaagaat 48312975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 54482753 - 54482449
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||| ||||||||||||||||| |||||  ||||||||||||||||||| |||||| | | ||| ||  | || || || | |||||||| |||||||    
T  54482753 actccgacccccatcctccaaaccaccatctgccacaccatacctagccaccaacaccctacgccataacccctctctatcaactaacaaccgccaacac 54482654  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||| || | |||||||||||||||||| ||||| |||  ||| |||| ||| ||||||| | |||||| || ||||| || ||||| |||||| ||||    
T  54482653 catttccctagcaaagcaatgttaaactcgctcaatctccgaacacccagccccccatactccctcctcaaacacaaagaatgccacccaacccacgata 54482554  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||  || |||||||| || ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  54482553 tttttcttttttcctcacaacc-ccccaaaaaaaattatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcata 54482455  T
Q  301 gacagg 306  Q
    ||||||    
T  54482454 gacagg 54482449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 5789686 - 5789526
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| | ||||||  | || ||||| | ||||||||||||||||    
T  5789686 actccggcccccatcctccaaacctccaccctccacaccatacctagccactaacaccttacgccacaacccttcactctctactaacaacctccaacac 5789587  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatact 161  Q
    || || ||||||||||  |  |||||||||||||||||| || | ||||||||| ||||||    
T  5789586 cactttcccaacaaagtgacattaaactccctcaacctcctatctcccaacccttcatact 5789526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 213 - 317
Target Start/End: Complemental strand, 29553183 - 29553079
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||||||| |||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||| ||||     
T  29553183 cctcacccccaccccaaaaaaatttattaaataaagattcaatggaagagattatacctgacggagctttgaagaaggaaagagcatagacaggcagaga 29553084  T
Q  313 agtca 317  Q
    |||||    
T  29553083 agtca 29553079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 46146223 - 46146392
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||| ||||||||| |||||| |  ||||||| |||||||| |||||| | | ||||||  |||| ||||| | ||||||||| ||||||    
T  46146223 actccggcccccattctccaaaccaccatccgctgcaccatatctagccaccaacaccctacgccacaacccatctctctctactaacaaccttcaacac 46146322  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctca 170  Q
    ||||| || |||||||||||||||||| ||||||| ||| |||| |||| |||||| |||| ||||||||    
T  46146323 cattttcctaacaaagcaatgttaaaccccctcaatctcctaacacccatccctccgtactccttcctca 46146392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 224 - 338
Target Start/End: Complemental strand, 19733359 - 19733245
Alignment:
Q  224 ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacgg 323  Q
    |||||||| || ||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| |    
T  19733359 ccccaaaaaaaattatttaataaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacaggaagggcagtcaggacag 19733260  T
Q  324 actttagaagaatca 338  Q
    | || ||||| ||||    
T  19733259 atttgagaaggatca 19733245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 19115194 - 19115286
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacag 305  Q
    |||||||||| |||||||| || |||||||| ||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  19115194 cctcacccccaccccaaaaaaaattattaaataaagattcaatggtagagattatacctgacggagctttgaagaaggaaagtgcatagacag 19115286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 237 - 333
Target Start/End: Complemental strand, 43516106 - 43516010
Alignment:
Q  237 tattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaag 333  Q
    ||||||| | ||||||||||| ||||||||||||||| ||||| ||||| |||||||| |||||||||||||  ||||||||||| |||||||||||    
T  43516106 tattaaaaatagattcaatgacagagattatacctgatggagccttgaagaaggaaagagcatagacaggtaatgcagtcaggacagactttagaag 43516010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 521 - 584
Target Start/End: Original strand, 6271383 - 6271446
Alignment:
Q  521 ttgaattaggccagtaccaatctaacaaatctgaaccattagatcattgttatatgaccaagat 584  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6271383 ttgaattaggccaataccaacctaacaaatctgaaccattagatcattgttatatgaccaagat 6271446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 240 - 335
Target Start/End: Original strand, 34976726 - 34976821
Alignment:
Q  240 taaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    |||| |||||||||||| |||||||||||||||| ||||||||||| |||||||| ||||| ||||| ||||  |||||||| ||||||| |||||    
T  34976726 taaataaagattcaatggaagagattatacctgatggagctttgaagaaggaaagcgcataaacaggcagagaggtcaggacagactttaaaagaa 34976821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 19648453 - 19648551
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||| ||| |||||||| || |||||||| |||||||||| |  ||| ||||||||||||||||||||||| || ||||| ||||||||||||||||    
T  19648453 cctcactcccaccccaaaaaaaattattaaataaagattcaagggtagaaattatacctgacggagctttgaagaaagaaagagcatagacaggtagag 19648551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 11586788 - 11586688
Alignment:
Q  5 cggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacaccatt 104  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||||||||||||| | ||||||  | ||| | || | |||||||| |||||||||||    
T  11586788 cggcccccattctccaaacctccatccgccacaccatacctagccactaacaccttacaccacaacccttccttatcaactaacaaccgccaacaccatt 11586689  T
Q  105 t 105  Q
    |    
T  11586688 t 11586688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 20396340 - 20396432
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacag 305  Q
    |||||| ||| |||||||| |||||| |||| ||||| | |||| |||||||||||||||| ||||||||||| |||||||| ||||||||||    
T  20396340 cctcactccccccccaaaaaaatttaataaataaagaattaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacag 20396432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 42953014 - 42952934
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttc 166  Q
    |||| |||||||||||||||||| ||||||||||  |||||||||||||| ||| ||||||||||||||||| ||| ||||    
T  42953014 aacatcctccaacaccatttacctaacaaagcaaaattaaactccctcaatctcctaacccccaaccctccagactccttc 42952934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 42952890 - 42952820
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    ||||| ||||||||||||||| |||||||||||||||| |||||||| || |||||||| |||||||||||    
T  42952890 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacagg 42952820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 236 - 305
Target Start/End: Original strand, 8935855 - 8935924
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacag 305  Q
    |||||||| ||| ||||||||  ||||||||||||||||||||||||||| |||||||| ||||||||||    
T  8935855 ttattaaataaaaattcaatggcagagattatacctgacggagctttgaagaaggaaagagcatagacag 8935924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 42779023 - 42779100
Alignment:
Q  228 aaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacag 305  Q
    |||| |||||| |||| ||||| |||||| |||||||||||||||| ||||||||||| |||||||| ||||||||||    
T  42779023 aaaaaaatttaataaataaagaatcaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacag 42779100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 317
Target Start/End: Complemental strand, 7662678 - 7662586
Alignment:
Q  225 cccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtca 317  Q
    ||||||| || | |||||| |||||||||| | |||| ||||||||||| ||||||||||| || ||||| |||||||||||||||| |||||    
T  7662678 cccaaaaaaaatgattaaataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 7662586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 80 - 311
Target Start/End: Original strand, 26694553 - 26694784
Alignment:
Q  80 tccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaag 179  Q
    |||| ||||| |||||||||||||||||| |  |||||||| ||||||||| |||| ||| | |||||||| ||||||||||||||  |   || |||||    
T  26694553 tccactaacatcctccaacaccatttacctagtaaagcaatattaaactccttcaatctcctcacccccaaacctccatacttctttttagaacacaaag 26694652  T
Q  180 tatccca-cctaacccaggatannnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggag 278  Q
    ||||||| |||| || || | |            |||||| ||| ||||| || || ||||| || |||||||||||| |||||||||||||||  ||||    
T  26694653 tatcccaacctatccaagta-atttttctacaatcctcactcccaccccagaaaaaattattcaataaagattcaatggaagagattatacctgttggag 26694751  T
Q  279 ctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    ||||||| || ||||| ||||||||||| ||||    
T  26694752 ctttgaagaaagaaagggcatagacaggcagag 26694784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 224 - 311
Target Start/End: Complemental strand, 23872848 - 23872761
Alignment:
Q  224 ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||||| || ||| |||||||||| |||||  | |||||||||||||  ||||||||||| |||||||||||||||||||| ||||    
T  23872848 ccccaaaaaaaattaataaacaaagaatcaatagaggagattatacctgctggagctttgaagaaggaaagtgcatagacaggcagag 23872761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 38296474 - 38296561
Alignment:
Q  224 ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||||| ||||||  ||| | |||||||||| || | ||||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  38296474 ccccaaaaaaatttagaaaaaatagattcaatggaaaaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagag 38296561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 72 - 170
Target Start/End: Complemental strand, 19733504 - 19733406
Alignment:
Q  72 catccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctca 170  Q
    |||| ||||| | ||||||||||||||||||||| || |||||| || |||||||||||||||| ||| |||| |||| |||| | |||| ||||||||    
T  19733504 catctctctctattaacaacctccaacaccattttcctaacaaaacagtgttaaactccctcaatctcctaacacccatcccttcgtactccttcctca 19733406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 311
Target Start/End: Original strand, 55299384 - 55299477
Alignment:
Q  218 ccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    ||||| ||| |||| || ||| |||||||||| |||||  | |||||||||||||  ||||||||||| |||||||||||||||||||| ||||    
T  55299384 cccccccccaaaaaaaaattaataaacaaagaatcaatagaggagattatacctgttggagctttgaagaaggaaagtgcatagacaggcagag 55299477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 338
Target Start/End: Complemental strand, 19308935 - 19308844
Alignment:
Q  247 agattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatca 338  Q
    |||||||||| |||||||||||||||  |||||| ||||||| ||||| || |||||||| || | || |||||| ||||| ||||||||||    
T  19308935 agattcaatggaagagattatacctgcgggagctctgaaaaaagaaagggcgtagacaggcagtgaagacaggacagacttaagaagaatca 19308844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 251 - 304
Target Start/End: Original strand, 2072336 - 2072389
Alignment:
Q  251 tcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
    |||||||||||||||||| |||||||||||||||| || ||||| |||||||||    
T  2072336 tcaatgaaagagattatatctgacggagctttgaagaaagaaagagcatagaca 2072389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 10562661 - 10562584
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||  ||||  ||||| || ||||||| |||||    
T  10562661 aagagattatacctgatggagctttgaagaaggaaagcgcatagacagacagagaggtcagaacagactttaaaagaa 10562584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 242 - 311
Target Start/End: Original strand, 20675822 - 20675891
Alignment:
Q  242 aacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    ||||||||||||||  | |||||||||||||  ||||||||||| || ||||||||||||||||| ||||    
T  20675822 aacaaagattcaatagaggagattatacctgctggagctttgaagaatgaaagtgcatagacaggcagag 20675891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 9691215 - 9691303
Alignment:
Q  247 agattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    |||||||| || |||||||||||||||| || ||||||| |||||||| ||||| ||||| || | ||| ||||| ||||| |||||||    
T  9691215 agattcaaagatagagattatacctgacagaactttgaagaaggaaagagcataaacaggaagcgaagtaaggacagacttgagaagaa 9691303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 242 - 321
Target Start/End: Complemental strand, 11586536 - 11586457
Alignment:
Q  242 aacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggac 321  Q
    ||||||||||||||| |||| ||||||||| || |||||||| |||||||||| || || ||||| || | |||||||||    
T  11586536 aacaaagattcaatggaagaaattataccttacagagctttgtaaaaggaaagagcgtacacaggaagtgtagtcaggac 11586457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 157
Target Start/End: Original strand, 19115056 - 19115138
Alignment:
Q  75 ccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    |||| |||| ||||||||||||||||||||| || || |||||||| ||||||||| |||||    ||||||| |||||||||    
T  19115056 ccctatccactaacaacctccaacaccatttccctaataaagcaatattaaactccttcaactgtctaacccctaaccctcca 19115138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 217 - 338
Target Start/End: Original strand, 14538244 - 14538365
Alignment:
Q  217 accccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtc 316  Q
    ||||||||||||||| || ||| | || | |||||||||| || ||||||||||||  |||||| ||||||| ||||| || |||||||  || | || |    
T  14538244 accccctccccaaaaaaaattaattaaaatagattcaatggaatagattatacctgcgggagctctgaaaaaagaaagggcgtagacagacagtgaagac 14538343  T
Q  317 aggacggactttagaagaatca 338  Q
    | |||||| || ||||||||||    
T  14538344 atgacggatttaagaagaatca 14538365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 53486284 - 53486195
Alignment:
Q  240 taaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggacttta 329  Q
    |||| ||||| |||||| |||||||||||| ||| ||||||||||| |||||||   |||||||||| ||||  ||||| || |||||||    
T  53486284 taaataaagaatcaatggaagagattatacttgatggagctttgaagaaggaaaacacatagacaggaagagaggtcagaacagacttta 53486195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 19162506 - 19162426
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatca 338  Q
    |||||||| ||||||  ||||| ||||| |||||||| |||||||||||||| || |||| |||  |||||| ||||||||    
T  19162506 aagagattgtacctgctggagccttgaagaaggaaagagcatagacaggtagcgcggtcaagacatactttaaaagaatca 19162426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 165
Target Start/End: Complemental strand, 55464383 - 55464303
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttctt 165  Q
    |||||||||||||||| ||||||| || ||  || ||||||||||||||| | || |||||| || ||||||| |||||||    
T  55464383 taacaacctccaacactatttacctaaaaatccagtgttaaactccctcatcttcctaaccctcatccctccaaacttctt 55464303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 2365764 - 2365858
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggta 308  Q
    |||||| ||||||| |||| || ||||| || | ||| |||||  ||||||||||||||||| ||| |||||||||||| ||  ||||||||||||    
T  2365764 cctcactccctcccaaaaaaaaattatttaaaagagactcaatagaagagattatacctgacagag-tttgaaaaaggagagaacatagacaggta 2365858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 338
Target Start/End: Original strand, 19837927 - 19838018
Alignment:
Q  247 agattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||||||||  ||||||||||||||  |||||| ||||||| ||||| || |||||||| || | || |||||| ||||| || |||||||    
T  19837927 agattcaatggtagagattatacctgcgggagctctgaaaaaagaaagggcgtagacaggcagtgaagacaggacagacttaaggagaatca 19838018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 43516249 - 43516182
Alignment:
Q  94 ccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatact 161  Q
    ||||||||||||||| ||||||||| | ||||| |||  |||| || | |||||||||||||||||||    
T  43516249 ccaacaccatttacctaacaaagcactattaaattcctgcaacttcctcacccccaaccctccatact 43516182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 336
Target Start/End: Complemental strand, 29328141 - 29328040
Alignment:
Q  235 tttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaaga 334  Q
    ||||||||| | ||||||| |  |||| ||||||| ||  ||||| ||||| ||||||||  |||||||||||||||  |||| |||  |||||||||||    
T  29328141 tttattaaaaatagattcagtagaagaaattatacttgttggagccttgaagaaggaaagaccatagacaggtagagaggtcaagacaaactttagaaga 29328042  T
Q  335 at 336  Q
    ||    
T  29328041 at 29328040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 86 - 114
Target Start/End: Original strand, 9691053 - 9691081
Alignment:
Q  86 aacaacctccaacaccatttacccaacaa 114  Q
    |||||||||||||||||||||||||||||    
T  9691053 aacaacctccaacaccatttacccaacaa 9691081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 306
Target Start/End: Original strand, 15342639 - 15342671
Alignment:
Q  274 cggagctttgaaaaaggaaagtgcatagacagg 306  Q
    ||||||||||||||||||||| |||||||||||    
T  15342639 cggagctttgaaaaaggaaagggcatagacagg 15342671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 51072194 - 51072122
Alignment:
Q  94 ccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttc 166  Q
    |||||||||||| || |||| |||||  ||||||||||||| |||| | |||||||| ||||| | |||||||    
T  51072194 ccaacaccatttccctaacagagcaacattaaactccctcatcctcctgacccccaaacctccttccttcttc 51072122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 265; Significance: 1e-147; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 26 - 338
Target Start/End: Original strand, 35541605 - 35541917
Alignment:
Q  26 ccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaa 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35541605 ccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaa 35541704  T
Q  126 actccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggatannnnnnnnnnnncctcaccccctcc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||            |||||||||||||    
T  35541705 actccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccagtatatttttcttttttcctcaccccctcc 35541804  T
Q  226 ccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggac 325  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35541805 ccaaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggac 35541904  T
Q  326 tttagaagaatca 338  Q
    |||||||||||||    
T  35541905 tttagaagaatca 35541917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 6051149 - 6051486
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6051149 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatcccgctccaataacaacctccaacac 6051248  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  6051249 catttacccaacaaagcaatgttaaactccttcaacctcttaacccccaaccctccatactccttcctcatactcaaagaatcccacctaacccaagata 6051348  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  6051349 tttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcata 6051448  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  6051449 gacaggtagagcagtcaggacagactttagaagaatca 6051486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 228 - 333
Target Start/End: Complemental strand, 47622444 - 47622339
Alignment:
Q  228 aaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactt 327  Q
    |||| |||||| | |||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  47622444 aaaaaaatttaattaacagagattcaatggaagagattatatctgacggagctttgaaaaaggaaagtgcatagacaggaagagcagtcaggacagactt 47622345  T
Q  328 tagaag 333  Q
    ||||||    
T  47622344 tagaag 47622339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 213 - 306
Target Start/End: Complemental strand, 3544483 - 3544390
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    |||||| |||||||||||| ||||||||||| | ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  3544483 cctcactccctccccaaaaaaatttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 3544390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 213 - 335
Target Start/End: Original strand, 20987913 - 20988035
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||| |||||||||||| ||||||||||| | ||||||||||| |||||| |||| ||||||||||||||| |||||||| |||||||||||||| |     
T  20987913 cctcactccctccccaaaaaaatttattaaaaatagattcaatgatagagatgatacatgacggagctttgaagaaggaaagagcatagacaggtagcga 20988012  T
Q  313 agtcaggacggactttagaagaa 335  Q
     ||||||||  |||| |||||||    
T  20988013 ggtcaggacacacttgagaagaa 20988035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 269 - 338
Target Start/End: Original strand, 51052695 - 51052764
Alignment:
Q  269 cctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatca 338  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  51052695 cctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacggactttagtagaatca 51052764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 13867222 - 13867102
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||| ||||||| |||| ||  ||||||| | ||||||||||| ||||||||||||||||||||| ||||| |||||||| ||||| |||||||  ||    
T  13867222 cctcactccctcccaaaaaaaaaatattaaaaatagattcaatgacagagattatacctgacggagccttgaagaaggaaagagcatatacaggtaatgc 13867123  T
Q  313 agtcaggacggactttagaag 333  Q
    ||||||||| ||||| |||||    
T  13867122 agtcaggacagacttaagaag 13867102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 236 - 338
Target Start/End: Original strand, 19042904 - 19043006
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||  ||| |||||||| ||||| |||||||||| || |||||| |||||||  ||||    
T  19042904 ttattaaacaaagattcaataaaagagattatacctgatggagctcagaagaaggaaagggcataaacaggtagagaagacaggacagactttatgagaa 19043003  T
Q  336 tca 338  Q
    |||    
T  19043004 tca 19043006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 213 - 335
Target Start/End: Complemental strand, 1247968 - 1247846
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||| |||||||||||    ||||||||| | ||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||| |||  |     
T  1247968 cctcacgccctccccaaatttttttattaaaaatagattcaatgacagagattatacccgacgaagctttgaaaaaggaaagagcatagacatgtaacga 1247869  T
Q  313 agtcaggacggactttagaagaa 335  Q
     |||||||| ||||| |||||||    
T  1247868 ggtcaggacagacttgagaagaa 1247846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 5809361 - 5809459
Alignment:
Q  235 tttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaag 333  Q
    ||||||||| | ||||| ||||| | ||||||||||||||||||||||||| |||||||| |||||||||||||  || |||||||| ||||| |||||    
T  5809361 tttattaaaaatagatttaatgacaaagattatacctgacggagctttgaagaaggaaagagcatagacaggtaacgcggtcaggacagacttaagaag 5809459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 49264466 - 49264402
Alignment:
Q  93 tccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||| |||||||||||||||||    
T  49264466 tccaacaccatttacctaacaaaacaaagttaaactccctcaacctcctaacccccaaccctcca 49264402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 19014365 - 19014274
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
    |||||| |||||||||||| ||||  ||||| | |||||||||| ||||||||||| ||||| |||||||||| |||||||| |||||||||    
T  19014365 cctcactccctccccaaaaaaattgtttaaaaatagattcaatggaagagattatatctgacagagctttgaagaaggaaagagcatagaca 19014274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 20796288 - 20796359
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    |||| |||||||||||||||||| ||||||||||  |||||||||||||||||| |||||||||| ||||||    
T  20796288 aacatcctccaacaccatttacctaacaaagcaaaattaaactccctcaacctcctaacccccaatcctcca 20796359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 20796441 - 20796511
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    ||||| ||||||||||||||| |||||||||||||||| |||||||| || |||||||| |||||||||||    
T  20796441 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacagg 20796511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 39431067 - 39431137
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    ||||| ||||||||||||||| |||||||||||||||| |||||||| || |||||||| |||||||||||    
T  39431067 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaataaggaaagagcatagacagg 39431137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 224 - 306
Target Start/End: Complemental strand, 49264336 - 49264254
Alignment:
Q  224 ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    |||||||| || ||||| ||||||||||||||| |||||||||||||||| |||||||| || || ||||| |||||||||||    
T  49264336 ccccaaaaaaagttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaagaaagagcatagacagg 49264254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 247 - 304
Target Start/End: Original strand, 28358683 - 28358740
Alignment:
Q  247 agattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||    
T  28358683 agattcaatgagagagattatacctgacggagctttgaagaaggaaagagcatagaca 28358740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 47622671 - 47622507
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||||||||| |||||||| |  || ||  | ||||| || | |||||| |  |||||     
T  47622671 actccggcccctatcctccaaacctccatccaccacaccatacctagccaccaacaccttacgtcataacccttccctatcaactaacaaacgtcaacat 47622572  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttctt 165  Q
    ||||| || ||||  || || |||||||| | ||||||| ||||  ||||||||||||||| |||    
T  47622571 cattttcctaacagggctatattaaactctcccaacctcctaacagccaaccctccatactcctt 47622507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 258 - 329
Target Start/End: Original strand, 17708861 - 17708932
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggacttta 329  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||| ||||  ||||| || |||||||    
T  17708861 aagagattatacctgatggagctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagacttta 17708932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 236 - 311
Target Start/End: Complemental strand, 25504351 - 25504276
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||||| |||||||||| |  ||||||||||||||||||||||||||| || ||||| ||||||||||| ||||    
T  25504351 ttattaaataaagattcaagggtagagattatacctgacggagctttgaagaaagaaagagcatagacaggaagag 25504276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 213 - 336
Target Start/End: Complemental strand, 40562940 - 40562817
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||| |||| ||||||| | ||| ||||| | ||||||||||| ||| || ||||||||| ||||||||||||| ||||| ||||||||||| |  |     
T  40562940 cctcacaccctgcccaaaaaattttgttaaaaatagattcaatgagagaaatgatacctgacagagctttgaaaaaagaaagcgcatagacaggaaccga 40562841  T
Q  313 agtcaggacggactttagaagaat 336  Q
     ||||||||  |||||||||||||    
T  40562840 ggtcaggacaaactttagaagaat 40562817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 253 - 335
Target Start/End: Original strand, 26721431 - 26721513
Alignment:
Q  253 aatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    |||| |||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||  ||||||||  |||||| |||||    
T  26721431 aatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcaggacaaactttaaaagaa 26721513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 306
Target Start/End: Original strand, 32642629 - 32642722
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    ||||||||||||||||||| || ||| |||| | |||||| ||| |||||||||||||||  |||||| |||||||||| || || ||||||||    
T  32642629 cctcaccccctccccaaaaaaaattaataaaaatagattcgatggaagagattatacctgcgggagctctgaaaaaggatagggcgtagacagg 32642722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 306
Target Start/End: Original strand, 48434908 - 48435001
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    |||||| ||| |||||||| || ||| |||  | |||||||||| |||||||||||||||  |||||||||||||||||||| || ||||||||    
T  48434908 cctcactcccaccccaaaaaaaattaataagaatagattcaatggaagagattatacctgcgggagctttgaaaaaggaaagagcgtagacagg 48435001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 335
Target Start/End: Original strand, 5497871 - 5497966
Alignment:
Q  240 taaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    |||||||| |||||||  | |||||||||||||| ||||||||||| ||||||| |||||||||||| | ||  |||||||| || || |||||||    
T  5497871 taaacaaatattcaatagaggagattatacctgatggagctttgaagaaggaaattgcatagacaggcaaagaggtcaggacagatttgagaagaa 5497966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 32352667 - 32352596
Alignment:
Q  240 taaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||||||| |||||  | |||||||||||||  ||||||||||| |||||||||||||||||||| ||||    
T  32352667 taaacaaagaatcaatagaggagattatacctgctggagctttgaagaaggaaagtgcatagacaggcagag 32352596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 39430908 - 39430979
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    |||| |||||||||||| ||||| |||||||||   |||||||||||||||||| ||||||| |||||||||    
T  39430908 aacatcctccaacaccacttacctaacaaagcacaattaaactccctcaacctcctaacccctaaccctcca 39430979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 45270880 - 45270943
Alignment:
Q  94 ccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||||  |||||||| ||||||    
T  45270880 ccaacaccatttacctaacaatgcaatattaaactccctcaacctctgcacccccaaacctcca 45270943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 236 - 305
Target Start/End: Complemental strand, 7396079 - 7396010
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacag 305  Q
    ||||| || |||||||||| | |||||||||||||||| ||||||||||| ||||||||  |||||||||    
T  7396079 ttatttaataaagattcaacggaagagattatacctgatggagctttgaagaaggaaagatcatagacag 7396010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 218 - 311
Target Start/End: Complemental strand, 48072803 - 48072710
Alignment:
Q  218 ccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    ||||| || ||||| || ||| |||||||||| |||||  | |||||||||||||  ||||||||||| |||||||| ||||||||||| ||||    
T  48072803 cccccccctcaaaaaaaattaataaacaaagaatcaatagaggagattatacctgctggagctttgaagaaggaaagcgcatagacaggcagag 48072710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 13112797 - 13112725
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccat 158  Q
    |||| ||||||||||||||| |||||||||| ||  |||||||| || |||||| ||||||||||||| ||||    
T  13112797 aacatcctccaacaccatttccccaacaaagaaaaattaaactctcttaacctcctaacccccaaccccccat 13112725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 240 - 305
Target Start/End: Complemental strand, 10710558 - 10710494
Alignment:
Q  240 taaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacag 305  Q
    |||| ||||| |||||| |||||||||||||||| ||||||||||| |||| ||| ||||||||||    
T  10710558 taaataaagaatcaatggaagagattatacctgatggagctttgaagaagg-aagcgcatagacag 10710494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 44692056 - 44692105
Alignment:
Q  91 cctccaacaccatttacccaacaaagcaatgttaaactccctcaacctct 140  Q
    |||||||||||| ||||| |||||||| || |||||||||||||||||||    
T  44692056 cctccaacaccacttaccaaacaaagctatattaaactccctcaacctct 44692105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 258 - 311
Target Start/End: Original strand, 45271044 - 45271097
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||| ||||||||||||||||| ||||| |||||||| ||||||||||| ||||    
T  45271044 aagaaattatacctgacggagccttgaagaaggaaagagcatagacaggaagag 45271097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 304
Target Start/End: Original strand, 3074529 - 3074593
Alignment:
Q  240 taaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
    |||| |||||||||| |  ||||||||||||||| |||||| |||| |||||||| |||||||||    
T  3074529 taaataaagattcaagggtagagattatacctgatggagctctgaagaaggaaagggcatagaca 3074593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 294
Target Start/End: Complemental strand, 16586547 - 16586500
Alignment:
Q  247 agattcaatgaaagagattatacctgacggagctttgaaaaaggaaag 294  Q
    ||||||||| ||||| ||||||||||  ||||||||||||||||||||    
T  16586547 agattcaataaaagaaattatacctgcaggagctttgaaaaaggaaag 16586500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 45795914 - 45795981
Alignment:
Q  94 ccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatact 161  Q
    ||||||||||||||| ||||||||| | ||||| |||  |||| || | |||||||||||||||||||    
T  45795914 ccaacaccatttacctaacaaagcactattaaattcctgcaacttcctcacccccaaccctccatact 45795981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 22191164 - 22191066
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||| ||| |||||||| |||||  |||| |||||||||| |   |||||||||||||| || ||| |||| |||||||  ||||||||||| ||||    
T  22191164 cctcactcccaccccaaaaaaattttataaataaagattcaagggttgagattatacctgatggtgctctgaagaaggaaaaagcatagacaggaagag 22191066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 33260036 - 33259986
Alignment:
Q  261 agattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||| |||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  33260036 agatgatacctgagggagctttgaagaaggaaagagcatagacagggagag 33259986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 33280195 - 33280145
Alignment:
Q  261 agattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||| |||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  33280195 agatgatacctgagggagctttgaagaaggaaagagcatagacagggagag 33280145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 22191288 - 22191227
Alignment:
Q  89 aacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaa 150  Q
    |||||||||||||||||||| |||| || ||  ||||||||||||| |||| | ||||||||    
T  22191288 aacctccaacaccatttacctaacagagaaacattaaactccctcatcctcctcacccccaa 22191227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 306
Target Start/End: Complemental strand, 36192180 - 36192087
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    |||||||||| |||||||| || ||| |||  | |||||| ||| |||||||||||| ||  |||||| |||||||||| || || ||||||||    
T  36192180 cctcacccccaccccaaaaaaaattaataagaatagattcgatggaagagattatacatgcgggagctctgaaaaaggatagggcgtagacagg 36192087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 117
Target Start/End: Complemental strand, 16631292 - 16631260
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagc 117  Q
    ||||||||||||||||||||| |||||||||||    
T  16631292 taacaacctccaacaccatttgcccaacaaagc 16631260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 235 - 311
Target Start/End: Complemental strand, 33142568 - 33142492
Alignment:
Q  235 tttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    ||||||||||| ||||||| |  ||||||| |||| ||  |||||| |||| |||||||||||||| ||||| ||||    
T  33142568 tttattaaacatagattcattagaagagataatacttgtgggagctctgaagaaggaaagtgcataaacaggaagag 33142492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 263; Significance: 1e-146; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 2364823 - 2365161
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2364823 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 2364922  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  2364923 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatactccttcctcatactcaaagaatcccacctaacccaagata 2365022  T
Q  201 nnnnnnnnnnnncctcaccccct-ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcat 299  Q
                ||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||    
T  2365023 tttttcttttttcctcaccccctcccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcat 2365122  T
Q  300 agacaggtagagcagtcaggacggactttagaagaatca 338  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  2365123 agacaggtagagcagtcaggacagactttagaagaatca 2365161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 34332409 - 34332072
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  34332409 actcccgcccccatcctccaaacctccatccgccacaccatacctagccactaacacctttctccacaaagcctccctctccaataacaaccgccaacac 34332310  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||    
T  34332309 catttacccaacaaagcaatgttaaactctctcaacctcgtaacccccaaccctccatactccttcctcatactcaaagtatcccatctaacccaagata 34332210  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  34332209 tttttctttttttctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttaaaaaaggaaagtgcata 34332110  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  34332109 gacaggtagagcagtcaggacagactttagtagaatca 34332072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 19919823 - 19919486
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19919823 actccggcccccatcctccaaaccgtcatcctccacaccatacctagccactaacacctgtctccacaaagcatccctctccaataacaacctccaacac 19919724  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||| ||||||| ||||    
T  19919723 catttgcccaacaaggcaatgttaaactccctcaacctcttaacccccaaccctccatactccttcctcatacccaaagtctcccacgtaacccaagata 19919624  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                |||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  19919623 tttttcttttttcctcactccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcata 19919524  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||||||||||||| |||||| ||||||| |||||||    
T  19919523 gacaggtagagcagttaggacgaactttagtagaatca 19919486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 10323165 - 10322888
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10323165 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaacaacaacctccaacac 10323066  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||| ||||    
T  10323065 catttacccaacaaagcaatgttaaactccctcagcctcttaacccccaaccctccaaactccttcctcatactcaaagtatcccatctaacccaagata 10322966  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggag 278  Q
                ||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||| |||||    
T  10322965 tttttcttttttcctcaccccctccccaaaaaaagttattaaacaaagattcaatggaagagattatacctgtcggag 10322888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 962757 - 962420
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||| ||||||||||||||||| |||||| || ||||||||||||||||||||||| | | ||||||  |||| ||||| | ||||||||||||||||    
T  962757 actccgacccccatcctccaaaccaccatccgccccaccatacctagccactaacaccctacgccacaacccatctctctctactaacaacctccaacac 962658  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||| || ||||||||||| |||||||||||||| ||| |||| |||| |||||| |||| |||||||| ||  |||| || ||| |||| ||| | ||    
T  962657 cattttcctaacaaagcaatattaaactccctcaaactcctaacacccatccctccgtactccttcctcaaacataaagaattccaactaatccacgtta 962558  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||  || |||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  962557 tttttcttttatcctcacttcccccccaaaaaaatttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcata 962458  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    |||||| || ||||||||||| || || ||||| ||||    
T  962457 gacaggaagtgcagtcaggacagatttgagaaggatca 962420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 12341849 - 12341512
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||  |||||| | ||||||||| |  |||| || | ||||| || |||||||    
T  12341849 actccggcccccatcctccaaaccaccatcctccacgccatacctagccaacaacaccctactccacaaacctcccctatcaactaacagccgccaacac 12341750  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||| ||||||||||||||||||||||| ||||||||| | || |||||||||||||||| | |||||| || ||||| |  ||| | |||||| || |    
T  12341749 catttccccaacaaagcaatgttaaactctctcaacctcctcacacccaaccctccatactccctcctcaaacacaaagaactccaaccaacccaagaaa 12341650  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||  || |||||||| |||||||| ||||||||||||||  ||||||||||||| ||||||||||| ||||||||||||| |||    
T  12341649 tctttcttttatcctcacaacccccccaaaaaaatttatttaacaaagattcaatagaagagattatacccgacggagctttaaaaaaggaaagtgtata 12341550  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    |||||| || ||||||| ||| || || ||||| ||||    
T  12341549 gacaggaagcgcagtcaagacagatttgagaagtatca 12341512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 16179493 - 16179806
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| ||| | || ||||||||||| |||||||||||||| | ||||||  | || ||||| | ||||||||||||||||    
T  16179493 actccggcccccatcctccaaacctccaccgtctacaccatacctcgccactaacaccttacgccacaacccttcactctctactaacaacctccaacac 16179592  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||| ||||||||||| |  |||||||||||||||||| |||| ||||||||| |||||| |||||||| ||  | || || ||| |||| ||| |  |    
T  16179593 catttccccaacaaagcgacattaaactccctcaacctcctaactcccaacccttcatactccttcctcagacatagagaattccaactaatccaagtaa 16179692  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                |||||||    ||||||   |||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  16179693 tttttcttttatcctcacc----ccccaa---aatttatttaacaaagattcaatggaagagattatacctgacagagctttgaaaaaggaaagtgcata 16179785  T
Q  301 gacaggtagagcagtcaggac 321  Q
    |||||| || ||| |||||||    
T  16179786 gacaggaagtgcaatcaggac 16179806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 5 - 338
Target Start/End: Original strand, 19891227 - 19891560
Alignment:
Q  5 cggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacaccatt 104  Q
    |||||||||||||||||||| |||||  ||||||||||||||||||| |||||| | | ||||||| || |||| || | |||||| | |||||||||||    
T  19891227 cggcccccatcctccaaaccaccatctgccacaccatacctagccaccaacaccctacgccacaaaccaaccctatcaactaacaatcgccaacaccatt 19891326  T
Q  105 tacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggatannnn 204  Q
    | | |||||| |||| ||||||||| ||||||||| |||| |||| ||||||||||| | |||||| || ||||| |  ||| | |||||| || |        
T  19891327 tcctcaacaatgcaaagttaaactctctcaacctcctaacacccatccctccatactccctcctcaaacacaaagaactccaaccaacccaagaaaattt 19891426  T
Q  205 nnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
            ||||||  || |||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| |||    
T  19891427 tctttcttcctcactacccccccaaaaaaatttatttaacaaagattcaatggaagatattatacctgacggagctttgaaaaaggaaagttcataaaca 19891526  T
Q  305 ggtagagcagtcaggacggactttagaagaatca 338  Q
    || || ||||||| ||| || || || |||||||    
T  19891527 ggaagcgcagtcaagacagatttgagtagaatca 19891560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 3 - 170
Target Start/End: Original strand, 3141399 - 3141566
Alignment:
Q  3 tccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacacca 102  Q
    |||||||||||||||||||| | |||||| || ||||||||||||||||||||||| | | ||||||  |||| ||||| | ||||||||||||||||||    
T  3141399 tccggcccccatcctccaaatcaccatccgccgcaccatacctagccactaacaccctacgccacaacccatctctctctactaacaacctccaacacca 3141498  T
Q  103 tttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctca 170  Q
    ||| || ||||||||| |||||||||||||||| ||| |||| |||| ||||| ||||| ||||||||    
T  3141499 ttttcctaacaaagcagtgttaaactccctcaatctcctaacacccatccctctatactccttcctca 3141566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 236 - 338
Target Start/End: Complemental strand, 48569382 - 48569280
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    ||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||| || |||||||    
T  48569382 ttatttaacaaagattcaatggaagagattatacctgatggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacggatttgagaagaa 48569283  T
Q  336 tca 338  Q
    |||    
T  48569282 tca 48569280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 40513106 - 40512986
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||| |||||||||||| ||||||||||| | ||||||||||| ||||||||||||||||||||| ||||| |||||||| |||||||||||||  ||    
T  40513106 cctcactccctccccaaaaaaatttattaaaaagagattcaatgatagagattatacctgacggagccttgaagaaggaaagagcatagacaggtaatgc 40513007  T
Q  313 agtcaggacggactttagaag 333  Q
    ||||||||| ||||| |||||    
T  40513006 agtcaggacagacttaagaag 40512986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 221 - 335
Target Start/End: Original strand, 19876009 - 19876123
Alignment:
Q  221 cctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcagga 320  Q
    |||| |||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |||||| |||||||||||||||||||| || | ||||||||    
T  19876009 cctcgccaaaaaaatttattaaacaaagattcaatgagagaaattatacctgacggagatttgaagaaggaaagtgcatagacaggaagcgaagtcagga 19876108  T
Q  321 cggactttagaagaa 335  Q
    | ||||| |||||||    
T  19876109 cagacttaagaagaa 19876123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 5 - 179
Target Start/End: Complemental strand, 48569629 - 48569455
Alignment:
Q  5 cggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacaccatt 104  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| |||||| | | ||||||  |||| || || | |||||||| |||||||||||    
T  48569629 cggcccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctacgccacaacccatctctatcaactaacaaccgccaacaccatt 48569530  T
Q  105 tacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaag 179  Q
    |  | | |||||||||||||||||| ||||| ||| |||| |||| ||||||||||| | |||||| || |||||    
T  48569529 tctctagcaaagcaatgttaaactctctcaatctcctaacacccagccctccatactccctcctcaaacacaaag 48569455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 233 - 321
Target Start/End: Original strand, 36731671 - 36731759
Alignment:
Q  233 aatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggac 321  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||| || |||||||||||    
T  36731671 aatttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagataggaagtgcagtcaggac 36731759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 8 - 173
Target Start/End: Complemental strand, 20531638 - 20531475
Alignment:
Q  8 cccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacaccatttac 107  Q
    |||||||| |||||||| ||||||||| || |||||||||| || |||||||| | ||||||| | ||||| || | |||||| | |||||||||||| |    
T  20531638 cccccatcttccaaacctccatcctccgcagcatacctagctaccaacaccttacgccacaaaccttccctatcaattaacaaacgccaacaccatttcc 20531539  T
Q  108 ccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatac 173  Q
    |||| || ||  |||||||||  ||||||||| ||||||||||||| ||||||| |||||||||||    
T  20531538 ccaataatgcggtgttaaact--ctcaacctcctaacccccaacccaccatactccttcctcatac 20531475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 233 - 304
Target Start/End: Complemental strand, 17077659 - 17077588
Alignment:
Q  233 aatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
    |||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  17077659 aatttattcaacaaagattcaatggaagagattatacctgacagagctttgaaaaaggaaagtgcatagaca 17077588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 213 - 335
Target Start/End: Complemental strand, 43121056 - 43120934
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||| ||| |||||||| |||||||||||||||||||||||| |||||||||||||| | ||||||||||| |||||||  ||||||||||  ||||     
T  43121056 cctcactcccaccccaaaaaaatttattaaacaaagattcaatggaagagattatacctaatggagctttgaagaaggaaaacgcatagacagacagaga 43120957  T
Q  313 agtcaggacggactttagaagaa 335  Q
     |||||||| || |||| |||||    
T  43120956 ggtcaggacagattttaaaagaa 43120934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 224 - 329
Target Start/End: Original strand, 23819334 - 23819439
Alignment:
Q  224 ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacgg 323  Q
    |||||||| |||||| ||||||||||||||||| |||||||||||| ||| ||||||||||| |||||||| ||||| ||||| ||||  |||||||| |    
T  23819334 ccccaaaataatttaataaacaaagattcaatggaagagattatacttgatggagctttgaagaaggaaagcgcatatacaggcagagaggtcaggacag 23819433  T
Q  324 acttta 329  Q
    ||||||    
T  23819434 acttta 23819439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 53942004 - 53942095
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
    |||||| ||||||||||||   ||||||||| | ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||    
T  53942004 cctcactccctccccaaaattttttattaaaaatagattcaatgatagagattatacctgacggagctttgaagaaggaaagagcatagaca 53942095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 213 - 306
Target Start/End: Original strand, 31675689 - 31675782
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    |||||| ||||||| |||| ||  ||||||| | ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  31675689 cctcactccctcccaaaaaaaaaatattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 31675782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 236 - 335
Target Start/End: Original strand, 50545024 - 50545123
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    |||||||| |||||||||||| |||||||||||||||| ||| ||||||| |||||||  |||||||| |||||||  |||||||| ||||||| |||||    
T  50545024 ttattaaataaagattcaatggaagagattatacctgatggacctttgaagaaggaaaacgcatagacgggtagagaggtcaggacagactttaaaagaa 50545123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 55367367 - 55367458
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
    |||||| |||||||||||| ||  | |||||||||||||| ||| |||||||||||||||||| |||||||||||||||||| || ||||||    
T  55367367 cctcactccctccccaaaaaaacattttaaacaaagattctatggaagagattatacctgacgcagctttgaaaaaggaaagagcgtagaca 55367458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 213 - 335
Target Start/End: Complemental strand, 46908052 - 46907930
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||| ||| |||||||| || ||||| || |||||||||||| |||||||||||| ||| ||||||||||| |||||||| ||||||| ||| ||||     
T  46908052 cctcacacccaccccaaaaaaaattatttaataaagattcaatggaagagattatacttgatggagctttgaagaaggaaagagcatagataggcagaga 46907953  T
Q  313 agtcaggacggactttagaagaa 335  Q
     ||||| || ||||||| |||||    
T  46907952 ggtcagaacagactttaaaagaa 46907930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 236 - 338
Target Start/End: Complemental strand, 52907401 - 52907299
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    |||||||||| |||||||||  |||||||||||||||| ||||||||||| |||||||| ||||| |||||||||| || || ||| |||||||  ||||    
T  52907401 ttattaaacatagattcaatagaagagattatacctgatggagctttgaagaaggaaagggcataaacaggtagagaagacatgacagactttatgagaa 52907302  T
Q  336 tca 338  Q
    |||    
T  52907301 tca 52907299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 236 - 317
Target Start/End: Complemental strand, 24926044 - 24925963
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtca 317  Q
    ||||| || |||||||||||| |||||||||||||||| ||||||||||| || ||||||||||||||||| |||| |||||    
T  24926044 ttatttaataaagattcaatggaagagattatacctgatggagctttgaagaaagaaagtgcatagacaggcagagaagtca 24925963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 15481140 - 15481049
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
    |||||| ||| |||||||| || ||||| || |||||||||||| |||||||||||||||| ||||||||||| || ||||| |||||||||    
T  15481140 cctcactcccaccccaaaaaaaattattcaataaagattcaatggaagagattatacctgatggagctttgaagaaagaaagagcatagaca 15481049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 17077867 - 17077754
Alignment:
Q  26 ccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaa 125  Q
    |||||||| || || ||||||||||| |  ||||| | ||||||  |||| ||||| | |||||||||| |||||||||| ||||||||| || ||||||    
T  17077867 ccatcctctactccgtacctagccaccagaaccttacgccacaacccatctctctctactaacaacctctaacaccattttcccaacaaaacagtgttaa 17077768  T
Q  126 actccctcaacctc 139  Q
    ||||||||||||||    
T  17077767 actccctcaacctc 17077754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 311
Target Start/End: Original strand, 18381840 - 18381904
Alignment:
Q  247 agattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  18381840 agattcaatggaagatattatacctgatggagctttgaaaaaggaaatagcatagacaggtagag 18381904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 14863974 - 14863903
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    |||| |||||||||||||||||| ||||| ||||  |||||||||||||| ||| |||||||||||||||||    
T  14863974 aacatcctccaacaccatttacctaacaatgcaaaattaaactccctcaatctcctaacccccaaccctcca 14863903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 21740032 - 21739961
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    |||| |||||||||||||||||| ||||||||||  |||||||||||||| ||| | |||||||||||||||    
T  21740032 aacatcctccaacaccatttacctaacaaagcaaaattaaactccctcaatctccttacccccaaccctcca 21739961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 238 - 317
Target Start/End: Complemental strand, 30166680 - 30166601
Alignment:
Q  238 attaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtca 317  Q
    |||||| |||||||||| | |||| ||||||||||| ||||||||||| || ||||| |||||||||||||||| |||||    
T  30166680 attaaataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 30166601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 235 - 306
Target Start/End: Complemental strand, 31920712 - 31920641
Alignment:
Q  235 tttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    ||||||||| | ||||||||||| ||||||||||| ||||| ||||||||| |||||||| |||||||||||    
T  31920712 tttattaaaaatagattcaatgacagagattatacttgacgaagctttgaagaaggaaagggcatagacagg 31920641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 14863815 - 14863745
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    ||||| ||||||||||||||| |||||||||||||| | |||||||| || |||||||| |||||||||||    
T  14863815 ttattcaacaaagattcaatggaagagattatacctaatggagctttaaagaaggaaagagcatagacagg 14863745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 21739847 - 21739777
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    ||||| ||||||||||||||| ||||||||||| |||| |||||||| || |||||||| |||||||||||    
T  21739847 ttattcaacaaagattcaatggaagagattataactgatggagctttaaagaaggaaagagcatagacagg 21739777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 15481268 - 15481195
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccat 158  Q
    ||||| |||||||||||||||||| || |||||||| ||||||||| ||||| || |||||||||| |||||||    
T  15481268 taacatcctccaacaccatttacctaataaagcaatattaaactccttcaacttcctaacccccaaacctccat 15481195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 321
Target Start/End: Original strand, 47538040 - 47538133
Alignment:
Q  228 aaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggac 321  Q
    |||| |||||| |||| ||||| |||||  ||||||||||| |||| |||| |||||| |||||||| ||||||||||||||||  ||||||||    
T  47538040 aaaaaaatttaataaataaagaatcaatagaagagattatatctgatggagttttgaagaaggaaagcgcatagacaggtagagaggtcaggac 47538133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 225 - 333
Target Start/End: Original strand, 34830162 - 34830270
Alignment:
Q  225 cccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacgga 324  Q
    ||||||| || |||||||| | ||||||||||  |||||||||||||||||||||   ||| |||||||| |||||||||||||   | |||||||| ||    
T  34830162 cccaaaaaaaattattaaaaatagattcaatggcagagattatacctgacggagccaggaagaaggaaagagcatagacaggtaacacggtcaggacaga 34830261  T
Q  325 ctttagaag 333  Q
    ||| |||||    
T  34830262 cttaagaag 34830270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 10868234 - 10868305
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    |||| |||||||||||||||||| ||||||||||  |||||||||||||| ||| | ||||| |||||||||    
T  10868234 aacatcctccaacaccatttacctaacaaagcaaaattaaactccctcaatctccttacccctaaccctcca 10868305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 36709668 - 36709765
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||| ||| |||||||| |||| ||| || |||||||||||| |||||||||||||||  ||||||||||| || ||||| |||| |||||| ||||    
T  36709668 cctcactcccaccccaaaaaaatt-attcaataaagattcaatggaagagattatacctgttggagctttgaagaaagaaagagcatcgacaggcagag 36709765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 242 - 311
Target Start/End: Complemental strand, 6175830 - 6175761
Alignment:
Q  242 aacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    ||||||||||||||  | |||||||||||||  |||| |||||| |||||||||||||||||||| ||||    
T  6175830 aacaaagattcaatagaggagattatacctgttggagttttgaagaaggaaagtgcatagacaggcagag 6175761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 16672358 - 16672281
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    |||| ||||||||||||||||| ||||| ||||||||  |||||||||||||||  |||| ||| |||||||| ||||    
T  16672358 aagaaattatacctgacggagccttgaagaaggaaagaacatagacaggtagagaggtcaagacagactttaggagaa 16672281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 36709540 - 36709613
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccat 158  Q
    ||||| |||||||||||||||||| |  |||||||| ||||||||| ||||| || |||||||||| |||||||    
T  36709540 taacatcctccaacaccatttacctagtaaagcaatattaaactccttcaacttcctaacccccaaacctccat 36709613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 311
Target Start/End: Complemental strand, 52250462 - 52250409
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  52250462 aagaaattatacctgacggagccttgaagaaggaaagcgcatagacaggtagag 52250409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 1231733 - 1231661
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccat 158  Q
    |||| ||||||||||||||| |||||||||| ||  |||||||| || |||||| ||||||||||||| ||||    
T  1231733 aacatcctccaacaccatttccccaacaaagaaaaattaaactctcttaacctcctaacccccaaccccccat 1231661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 48930272 - 48930428
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||| ||||||| ||||||| |  ||||||||| ||||||| || ||||| || ||| |   ||| |||  || |||||| |  |||| || |||||||    
T  48930272 actccagcccccaacctccaacctcccatcctcctcaccatatctcgccaccaaaaccctataccataaactattcctctctaccaacagccgccaacac 48930371  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    |||||||| ||||| ||||| ||||||||||||||||||   |||||||| ||||||    
T  48930372 catttacctaacaatgcaatattaaactccctcaacctccgcacccccaaacctcca 48930428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 258 - 329
Target Start/End: Original strand, 6825615 - 6825686
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggacttta 329  Q
    |||| ||||||| ||||||||| ||||| |||||||| |||||||||||||||   |||| |||||||||||    
T  6825615 aagaaattatacttgacggagccttgaagaaggaaagagcatagacaggtagaaaggtcaagacggacttta 6825686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 338
Target Start/End: Original strand, 8130765 - 8130856
Alignment:
Q  247 agattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatca 338  Q
    |||||| ||| |||||||| ||||||  ||||| ||||| |||||||| |||||||| ||| | || |||| ||| ||||||||||||||||    
T  8130765 agattctatggaagagattctacctgctggagccttgaagaaggaaagagcatagaccggttgcgcggtcaagacagactttagaagaatca 8130856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 338
Target Start/End: Complemental strand, 17271090 - 17270999
Alignment:
Q  247 agattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatca 338  Q
    |||||||||| || |||||||||||||| || ||||||||||| |||| || |||||| | ||||  |||||||| ||||| |||| |||||    
T  17271090 agattcaatggaacagattatacctgacagaactttgaaaaagaaaagagcgtagacatgaagagaggtcaggacagacttcagaaaaatca 17270999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 52250718 - 52250564
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||||||||||| ||||||| |  ||||||||| ||||||| || ||||| |||||| |   ||| |||  | |||||||||  ||||| | |||||||    
T  52250718 actccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccataaacta-ccctctccaccaacaaacgccaacac 52250620  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcc 156  Q
    ||||| || ||||| ||||  ||||||||||||||||||   || |||||||||||    
T  52250619 catttccctaacaacgcaacattaaactccctcaacctccgcacacccaaccctcc 52250564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 42674788 - 42674722
Alignment:
Q  245 aaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||||||||| ||||||||| |||||  ||||||||||| || ||||| ||||||||||| ||||    
T  42674788 aaagattcaatggaagagattacacctgttggagctttgaagaaagaaagagcatagacaggcagag 42674722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 45968122 - 45968204
Alignment:
Q  218 ccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
    ||||||||||||||||| ||||| || | |||||||||  | ||||  |||||||| |||||||||||||| ||||| |||||    
T  45968122 ccccctccccaaaagaaattatttaaaatagattcaatagaggagacaatacctgatggagctttgaaaaaagaaagagcata 45968204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 21735163 - 21735082
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaag 294  Q
    |||||||||||||||||||  | |||||||| | |||||||||  | || ||||||||||  || |||||||||||||||||    
T  21735163 cctcaccccctccccaaaaataattattaaaaatagattcaatataggaaattatacctgcaggggctttgaaaaaggaaag 21735082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 38774902 - 38774975
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccat 158  Q
    ||||| |||||| ||||||||  | ||||||||| ||||||||||||||| | || |||||||||| |||||||    
T  38774902 taacatcctccagcaccatttttctaacaaagcagtgttaaactccctcatcgtcctaacccccaaacctccat 38774975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 53504610 - 53504529
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaag 294  Q
    ||||||| || |||||||| ||| | ||||| | |||||||||  |||| ||||||||||  ||||||||||||||||||||    
T  53504610 cctcaccacccccccaaaaaaatcttttaaaaagagattcaatagaagaaattatacctgtaggagctttgaaaaaggaaag 53504529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 10868431 - 10868495
Alignment:
Q  242 aacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    ||||| ||||||||| ||||||||||||||||  ||||||| || |||||||| ||||| |||||    
T  10868431 aacaaggattcaatggaagagattatacctgatagagctttaaagaaggaaagagcatatacagg 10868495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 45684806 - 45684878
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    ||||| |||||||||||||||||| |  |||||||| ||||||||| |||| | | |||||||||| ||||||    
T  45684806 taacatcctccaacaccatttacctagtaaagcaatattaaactccttcaatcgcctaacccccaaacctcca 45684878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 31675570 - 31675637
Alignment:
Q  94 ccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatact 161  Q
    ||||||||||||||| |||||||||  ||||||||||||||||    | ||||| |||||||||||||    
T  31675570 ccaacaccatttacctaacaaagcatggttaaactccctcaactgtctcacccctaaccctccatact 31675637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 48930495 - 48930582
Alignment:
Q  224 ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||||| ||||||  ||| | ||| |||| | |||| ||||||||||||||||| ||||| |||| ||| ||||||||||| ||||    
T  48930495 ccccaaaaaaatttagaaaaaatagaatcaagggaagaaattatacctgacggagccttgaagaaggtaagagcatagacaggaagag 48930582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 91 - 157
Target Start/End: Complemental strand, 8948525 - 8948459
Alignment:
Q  91 cctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    ||||||||||||||| |||||||| || | ||||||| |||| | |||| |||||||||| ||||||    
T  8948525 cctccaacaccatttccccaacaacgccaagttaaaccccctaagcctcctaacccccaaacctcca 8948459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 22733801 - 22733731
Alignment:
Q  265 tatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    ||||| ||| ||||| ||||| ||||| || ||||||||||| || ||||| ||||||||||| |||||||    
T  22733801 tatacatgatggagccttgaagaaggacagagcatagacaggaagtgcagttaggacggacttcagaagaa 22733731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 335
Target Start/End: Complemental strand, 22734105 - 22733983
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||| ||| ||| |||| || ||||| || | |||||||||| |||||||||||| ||| ||||| ||||| ||| | || ||||||||| | || |     
T  22734105 cctcactcccccccaaaaaaaaattattcaatatagattcaatggaagagattatacatgatggagccttgaagaagaacagagcatagacaagaagtgt 22734006  T
Q  313 agtcaggacggactttagaagaa 335  Q
    ||| || | ||||||||||||||    
T  22734005 agttagaatggactttagaagaa 22733983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 31920852 - 31920810
Alignment:
Q  94 ccaacaccatttacccaacaaagcaatgttaaactccctcaac 136  Q
    ||||||||||||||| |||||||||  ||||||||||||||||    
T  31920852 ccaacaccatttacctaacaaagcatggttaaactccctcaac 31920810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 8948348 - 8948279
Alignment:
Q  266 atacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    |||||||| ||||||||||| |||||||  ||||||||||| ||||  ||||||||  |||| |||||||    
T  8948348 atacctgagggagctttgaagaaggaaatagcatagacagggagagaggtcaggacaaacttaagaagaa 8948279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 304
Target Start/End: Original strand, 11584870 - 11584927
Alignment:
Q  247 agattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
    |||||||||| | |||||||||||||  |||||||||||||| ||||| || ||||||    
T  11584870 agattcaatggaggagattatacctgcgggagctttgaaaaaagaaagagcgtagaca 11584927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 304
Target Start/End: Original strand, 14309371 - 14309428
Alignment:
Q  247 agattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
    ||||||||| | ||| || ||||||||||||||| |||| |||||||| |||||||||    
T  14309371 agattcaataagagaaatgatacctgacggagctatgaagaaggaaagagcatagaca 14309428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 44888538 - 44888599
Alignment:
Q  89 aacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaa 150  Q
    |||||||||||||||||||| |||| || ||  ||||||||||||| |||| | ||||||||    
T  44888538 aacctccaacaccatttacctaacagagaaacattaaactccctcatcctcctcacccccaa 44888599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 25388223 - 25388163
Alignment:
Q  244 caaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
    |||||||| |||| |||||||||||||| |  |||||||||| || ||||| |||||||||    
T  25388223 caaagatttaatggaagagattatacctaaaagagctttgaagaaagaaagagcatagaca 25388163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 41367811 - 41367747
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaa 150  Q
    ||||||||| ||||||| ||||||||||||||||  || |||||||  | |||||| ||||||||    
T  41367811 aacaacctctaacaccacttacccaacaaagcaacattgaactcccaaatcctctttacccccaa 41367747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 254; Significance: 1e-141; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 30731908 - 30731571
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  30731908 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaatacctgtctccacaaagcatccctctccaataacaacctccaacac 30731809  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||| ||||    
T  30731808 catttacccaacaaagcaatgttaaactccctcaacctcttaactcccaaccctccatactccttcctcatactcaaagtctcccacctaacccaagata 30731709  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                |||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  30731708 tttttcttttttcctcactccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcata 30731609  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    |||||||||||||||||||||||||||||| |||||||    
T  30731608 gacaggtagagcagtcaggacggactttagtagaatca 30731571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 42514266 - 42514603
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42514266 actccggcccccatcctccaaactgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctctaataacaacctccaacac 42514365  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  42514366 aatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatactccttcctcatactcaaagaatcccacctaacccaagata 42514465  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                |||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  42514466 tttttcttttttcctcaccccctccccagaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcata 42514565  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  42514566 gacaggtagagcagtcaggacagactttagaagaatca 42514603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 337
Target Start/End: Original strand, 23238929 - 23239265
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||  ||||||    
T  23238929 actccggcccccaacctccaaacctccatccgccacaccatacctagccactaacacctttctccacaaagattccctctccaataacaaccgtcaacac 23239028  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||| ||||| || |||||||||||||||||||||||| ||||    
T  23239029 catttacccaacaaagcaatgttgaactccctcaatctcgtaacccccaaccctccatactccttccgcaaactcaaagtatcccacctaacccaagata 23239128  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23239129 tttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcata 23239228  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatc 337  Q
    |||||||||||||||||||||||||||||||||||||    
T  23239229 gacaggtagagcagtcaggacggactttagaagaatc 23239265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 28535269 - 28534933
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  28535269 actccggcccccatcctccaaacctccatccgccacaccatacctagccaccaacacctttctccacaaagcttccttctccaataacaaccgccaacac 28535170  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    |||||||||||| |||| |  |||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||  || || |    
T  28535169 catttacccaac-aagctaaattaaactctctcaacctcgtaacccccaaccctccatacttcttcctcaaactcaaagtatcccacctaattcaagaaa 28535071  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  28535070 tttttcttttatcctcaccccctcctcaaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcata 28534971  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  28534970 gacaggtagagcagtcaggacggacttaagaagaatca 28534933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 35983385 - 35983048
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||| || |||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  35983385 actccggcccccatcctccaaacctccatccgcctcaccatacctagccaccaacacctttctccacaaagcttccttctccaataacaaccgccaacac 35983286  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    |||||| |||||||||| |  ||||||||  |||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| || |    
T  35983285 catttatccaacaaagctaaattaaactctttcaacctcgtaacccccaaccctccatactccttcctcaaactcaaagtatcccacctaatccaagaaa 35983186  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||||||||||||||| | |||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||    
T  35983185 cttttcttttatcctcaccccctccccaaaaaattttattaaacaaagattcaatggaaaagattatacctgacagagctttgaaaaaggaaagtgcata 35983086  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  35983085 gacaggtagagcagtcaggacagacttaagaagaatca 35983048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 27116767 - 27116590
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  27116767 actccggcccccatcctccaaaccgccatcctccacgccatacctagccactaacacctttctccacaacgcatcctgctccaataacaacctccaacac 27116668  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaa 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  27116667 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatactccttcctcatacccaaa 27116590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 33170204 - 33170524
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||| | | ||||||  |||| ||||| | ||||||||||||||||    
T  33170204 actccggcccccatcctccaaaccaccatccgccgcaccatacctagccactaacaccctacgccacaacccatctctctctactaacaacctccaacac 33170303  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||| || ||||||||||| |||||||||||||| ||| |||| |||| ||||||||||| |||||||| ||  |||| || ||| |||| ||| | ||    
T  33170304 cattttcctaacaaagcaatattaaactccctcaaactcctaacacccatccctccatactccttcctcaaacataaagaattccaactaatccacgtta 33170403  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||  || |||||||| |||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||    
T  33170404 tttttcttttatcctcacttcccccccaaaaaaatttatttaacaaagattcaatggaatagattatacctgacggagctttgaaaaaggaaagagcata 33170503  T
Q  301 gacaggtagagcagtcaggac 321  Q
    ||||||||| |||||||||||    
T  33170504 gacaggtagtgcagtcaggac 33170524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 8299776 - 8299471
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||  |||||| | ||||||||| |  |||| || | ||||| ||||||||||    
T  8299776 actccggcccccatcctccaaaccaccatcctccacgccatacctagccaacaacaccctactccacaaacctcccctatcaactaacagcctccaacac 8299677  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||| ||||||||||||||||||||||| | ||||||| |||| |||||||||||||||| | ||||||  | || || |  ||| | |||||| || |    
T  8299676 catttccccaacaaagcaatgttaaactctcgcaacctcctaacacccaaccctccatactccctcctcaagcacacagaactccaaccaacccacgaaa 8299577  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||  || |||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  8299576 tctttcttttatcctcacatcccccccaaaaaaatttattaaacaaagattcaatagaagagattatacctgacggagctttgaaaaaggaaagtgcata 8299477  T
Q  301 gacagg 306  Q
    ||||||    
T  8299476 gacagg 8299471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 10780747 - 10781050
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||||  |||||| | ||||||||| |  |||| || | ||||| || |||||||    
T  10780747 actccggcccccatcctccaaaccaccatccgccactccatacctagccaacaacaccctactccacaaacctcccctatcaactaacagccgccaacac 10780846  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||| ||||||||||||||||||||||| ||||||||| | || |||||||||||||||| | |||||| || ||||| |  ||| | |||||| || |    
T  10780847 catttccccaacaaagcaatgttaaactctctcaacctcctcacacccaaccctccatactccctcctcaaacacaaagaactccaaccaacccaagaaa 10780946  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||  || |||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  10780947 tctttcttttatcctcacaacccccccaaaaaaatttatttaacaaagattcaatagaagagattatacctgacggagctttgaaaaaggaaagtgcata 10781046  T
Q  301 gaca 304  Q
    ||||    
T  10781047 gaca 10781050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 1 - 336
Target Start/End: Original strand, 27796030 - 27796365
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||||||||| |||||| | | ||| ||  | || || || | |||||||| |||||||    
T  27796030 actctggcccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctacgccataacccctctctatcaactaacaaccgccaacac 27796129  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||| || | |||||||||||||||||  ||||| |||  ||| |||||||| ||||||| | |||||| || ||||| || ||| | ||||||  |||    
T  27796130 catttccctagcaaagcaatgttaaacttgctcaatctccgaacacccaaccccccatactccctcctcaaacacaaagaatgccaaccaacccacaata 27796229  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||  || |||||||| || ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27796230 tttttcttttttcctcacaacccccccaaaaaaaattatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcata 27796329  T
Q  301 gacaggtagagcagtcaggacggactttagaagaat 336  Q
    |||||| || |||||||||||| | || ||||||||    
T  27796330 gacaggaagtgcagtcaggacgaatttgagaagaat 27796365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 26 - 306
Target Start/End: Complemental strand, 25857008 - 25856728
Alignment:
Q  26 ccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaa 125  Q
    ||||||||||| |||||||||||||  |||||| | ||||||||| |  |||| || | ||||| |||| |||||||||| |||||||||||||||||||    
T  25857008 ccatcctccacgccatacctagccaacaacaccctactccacaaacctcccctatcaactaacagcctctaacaccatttccccaacaaagcaatgttaa 25856909  T
Q  126 actccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggatannnnnnnnnnnncctcaccccctcc 225  Q
    |||| | ||||||| |||| |||||||||||||||| | ||||||  | || || |  ||||| |||||| || |            ||||||  || ||    
T  25856908 actctcgcaacctcctaacacccaaccctccatactccctcctcaagcacacagaactccacccaacccacgaaatctttcttttatcctcacatccccc 25856809  T
Q  226 ccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    |||||| ||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25856808 ccaaaaaaatttattaaacaaagatttaatataagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 25856728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 42928677 - 42928867
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||| ||||| ||||||||||||| |||||| | | ||| ||||| ||||| || | |||||| | |||||||    
T  42928677 actccggcccccatcctccaaacctccatccgccacatcatacctagccaccaacaccctacaccataaagcttccctatctattaacaatcgccaacac 42928776  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaa 191  Q
    || || |||||||||||||| |||||||| ||||||||| |||| |||| ||||||||||| |||||||| ||| ||||||||||||||||    
T  42928777 cactttcccaacaaagcaatattaaactctctcaacctcctaacacccatccctccatactccttcctcagactaaaagtatcccacctaa 42928867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 31642057 - 31642195
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||| |||||||||| |||||||| |||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  31642057 actccggcccccatcctccaaacctccatccgccacaccatatctagccaccaacacctttctccacaaagcttccttctccaataacaaccgccaacac 31642156  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctc 139  Q
    |||||| |||||||||| |  |||||||| |||||||||    
T  31642157 catttatccaacaaagctaaattaaactctctcaacctc 31642195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 27165534 - 27165390
Alignment:
Q  26 ccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaa 125  Q
    |||||||||||| ||||||||||||| |||||||| | | ||||  | ||||| || | |||||||| |||||||||||| |||| ||| ||||||||||    
T  27165534 ccatcctccacaacatacctagccaccaacaccttacgcaacaacccttccctatctactaacaaccgccaacaccatttccccagcaatgcaatgttaa 27165435  T
Q  126 actccctcaacctcttaacccccaaccctccatacttcttcctca 170  Q
    |||  ||||||||| |||| |||| ||||||||||| ||||||||    
T  27165434 actttctcaacctcctaacacccatccctccatactccttcctca 27165390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 213 - 306
Target Start/End: Complemental strand, 22094632 - 22094538
Alignment:
Q  213 cctcaccccctccccaaaagaat-ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    |||||||||| |||||||| ||  |||||||| ||||||||||||  ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  22094632 cctcacccccaccccaaaaaaaaattattaaataaagattcaatggcagagattatacctgacggagctttgaagaaggaaagagcatagacagg 22094538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 236 - 338
Target Start/End: Complemental strand, 35122047 - 35121945
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    ||||| ||||||||||||||| |||||||||||||||| |||||||| || |||||||| ||||||||||| |||| |||||  || || ||||| ||||    
T  35122047 ttattcaacaaagattcaatggaagagattatacctgaaggagctttaaagaaggaaagagcatagacaggcagagaagtcaaaactgattttaggagaa 35121948  T
Q  336 tca 338  Q
    |||    
T  35121947 tca 35121945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 238 - 311
Target Start/End: Complemental strand, 29572227 - 29572154
Alignment:
Q  238 attaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    ||||| ||||||||||| | |||||||||||| |||| |||||||||| |||||||||||||||||||| ||||    
T  29572227 attaagcaaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagag 29572154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 238 - 311
Target Start/End: Complemental strand, 29573604 - 29573531
Alignment:
Q  238 attaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    ||||| ||||||||||| | |||||||||||| |||| |||||||||| |||||||||||||||||||| ||||    
T  29573604 attaagcaaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagag 29573531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 238 - 311
Target Start/End: Complemental strand, 29574981 - 29574908
Alignment:
Q  238 attaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    ||||| ||||||||||| | |||||||||||| |||| |||||||||| |||||||||||||||||||| ||||    
T  29574981 attaagcaaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagag 29574908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 238 - 311
Target Start/End: Complemental strand, 29576358 - 29576285
Alignment:
Q  238 attaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    ||||| ||||||||||| | |||||||||||| |||| |||||||||| |||||||||||||||||||| ||||    
T  29576358 attaagcaaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagag 29576285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 238 - 311
Target Start/End: Complemental strand, 29577735 - 29577662
Alignment:
Q  238 attaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    ||||| ||||||||||| | |||||||||||| |||| |||||||||| |||||||||||||||||||| ||||    
T  29577735 attaagcaaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagag 29577662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 238 - 311
Target Start/End: Complemental strand, 29579112 - 29579039
Alignment:
Q  238 attaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    ||||| ||||||||||| | |||||||||||| |||| |||||||||| |||||||||||||||||||| ||||    
T  29579112 attaagcaaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagag 29579039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 236 - 317
Target Start/End: Complemental strand, 30509382 - 30509301
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtca 317  Q
    |||||||||||||| |||||| |||||||||||||||  |||||||| || |||||||| ||||||||||| |||| |||||    
T  30509382 ttattaaacaaagaatcaatggaagagattatacctgttggagctttaaagaaggaaagagcatagacaggcagagaagtca 30509301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 236 - 317
Target Start/End: Complemental strand, 30549725 - 30549644
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtca 317  Q
    |||||||||||||| |||||| |||||||||||||||  |||||||| || |||||||| ||||||||||| |||| |||||    
T  30549725 ttattaaacaaagaatcaatggaagagattatacctgttggagctttaaagaaggaaagagcatagacaggcagagaagtca 30549644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 19506779 - 19506847
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
    ||||| ||||||||||||||| |||||||||||||||| |||||||| || |||||||| |||||||||    
T  19506779 ttattcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagaca 19506847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 26261664 - 26261592
Alignment:
Q  249 attcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggac 321  Q
    |||||||  |||||||||||||||| ||||||||||| |||||||| |||||||||| ||||| |||||||||    
T  26261664 attcaatagaagagattatacctgaaggagctttgaagaaggaaagagcatagacagatagagaagtcaggac 26261592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 220 - 335
Target Start/End: Original strand, 380666 - 380781
Alignment:
Q  220 ccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcagg 319  Q
    |||||||||||| || |||||||| | ||||||||||| ||| || |||||||| | ||||||||| |||||||| ||||||||| | ||||  |||| |    
T  380666 ccctccccaaaaaaaattattaaaaatagattcaatgatagaaatgatacctgatgaagctttgaagaaggaaagagcatagacatgcagagaggtcaag 380765  T
Q  320 acggactttagaagaa 335  Q
    ||  ||||||||||||    
T  380766 acaaactttagaagaa 380781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 258 - 333
Target Start/End: Original strand, 21084684 - 21084759
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaag 333  Q
    |||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||  |||| ||| |||||||||||    
T  21084684 aagaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttagaag 21084759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 213 - 335
Target Start/End: Complemental strand, 20208102 - 20207980
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||| ||| |||||||| |||||| |||  | ||| | |||| |||||||||||| ||| ||||||||||| |||||||| ||||||||||| ||||     
T  20208102 cctcactcccaccccaaaaaaatttaataagaagagaattaatggaagagattatacatgatggagctttgaagaaggaaagcgcatagacaggcagaga 20208003  T
Q  313 agtcaggacggactttagaagaa 335  Q
     || ||||| ||||||| |||||    
T  20208002 ggttaggacagactttaaaagaa 20207980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 38358225 - 38358323
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||| ||| ||||| || || ||||| || |||||||||||| |||||||||||||||  ||||||||||| || ||||| ||||||||||| ||||    
T  38358225 cctcactcccaccccagaaaaaattattcaataaagattcaatggaagagattatacctgttggagctttgaagaaagaaagagcatagacaggcagag 38358323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 19338388 - 19338453
Alignment:
Q  91 cctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcc 156  Q
    |||||| ||||| |||||||| |||||||||||||||||| |||||||| |||||||||| |||||    
T  19338388 cctccaccaccacttacccaaaaaagcaatgttaaactccttcaacctcctaacccccaaacctcc 19338453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 338
Target Start/End: Complemental strand, 33385299 - 33385230
Alignment:
Q  269 cctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatca 338  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||| ||| || || ||||| ||||    
T  33385299 cctgacggagctttgaaaaaggaaagtgcatagacaggaagcgcagtcaagacagatttgagaagtatca 33385230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 213 - 333
Target Start/End: Original strand, 588265 - 588385
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||| |||||||||||| || ||||| || | |||||||||| |||||||||||| | | ||||||||||| ||  |||| ||||||||||| ||||     
T  588265 cctcactccctccccaaaaaaaattattcaatagagattcaatggaagagattatacataatggagctttgaagaaacaaagagcatagacaggcagaga 588364  T
Q  313 agtcaggacggactttagaag 333  Q
     |||| ||| || ||||||||    
T  588365 ggtcaagacagattttagaag 588385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 235 - 311
Target Start/End: Original strand, 22437998 - 22438074
Alignment:
Q  235 tttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    ||||||||||| |||||||||  |||||||||||||||| |||||| |||| |||||||  ||||||||| ||||||    
T  22437998 tttattaaacatagattcaatataagagattatacctgagggagctatgaagaaggaaaaagcatagacatgtagag 22438074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 12825752 - 12825794
Alignment:
Q  8 cccccatcctccaaaccgccatcctccacaccatacctagcca 50  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  12825752 cccccatcctccaaactgccatcctccacaccatacctagcca 12825794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 335
Target Start/End: Original strand, 41590892 - 41590969
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    |||| ||||||||||||||||| ||||| |||||||| | ||||||||||||||  |||| ||| |||||||| ||||    
T  41590892 aagaaattatacctgacggagccttgaagaaggaaagagtatagacaggtagagaggtcaagacagactttaggagaa 41590969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 38358097 - 38358169
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    ||||| |||||||||||||||||| |  |||||||| ||||||||| |||| ||| |||||||||| ||||||    
T  38358097 taacatcctccaacaccatttacctagtaaagcaatattaaactccttcaatctcctaacccccaaacctcca 38358169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 335
Target Start/End: Original strand, 6050025 - 6050120
Alignment:
Q  240 taaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    |||| ||||| | |||| |||| ||||||||||| ||||||||||| |||||||| ||||||||||| || |  ||||| || ||||||| |||||    
T  6050025 taaataaagaattaatggaagatattatacctgatggagctttgaagaaggaaagcgcatagacaggcagcgaggtcagaacagactttaaaagaa 6050120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 338
Target Start/End: Original strand, 42260066 - 42260165
Alignment:
Q  239 ttaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||| |||| ||||||| || |||||||| |||| ||||||||||| |||||||| || |||||||| || |  |||| ||| ||||| ||||||||||    
T  42260066 ttaaataaagtttcaatggaaaagattatatctgatggagctttgaagaaggaaagagcgtagacaggaagcgaggtcaagacagacttgagaagaatca 42260165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 22174503 - 22174453
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaac 136  Q
    |||||||||||||||||| |||| |||||||| |||||||||||| |||||    
T  22174503 aacaacctccaacaccatctacctaacaaagctatgttaaactccttcaac 22174453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 258 - 311
Target Start/End: Complemental strand, 4297646 - 4297593
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||| ||||||||||||||||  ||||| |||||||| ||||||||||||||||    
T  4297646 aagaaattatacctgacggagtcttgaagaaggaaagagcatagacaggtagag 4297593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 213 - 302
Target Start/End: Original strand, 34481706 - 34481795
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcataga 302  Q
    |||||| ||| ||| |||| || ||| ||||||||||||||||  | |||||||||||||| | ||||||||| ||||| ||||| ||||    
T  34481706 cctcactcccccccaaaaaaaaattaataaacaaagattcaatagaggagattatacctgatgaagctttgaagaaggagagtgcgtaga 34481795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 35122221 - 35122144
Alignment:
Q  80 tccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    |||| ||||| ||||||||||||||| || |  || ||||  ||||||| |||||||||| |||||||||||||||||    
T  35122221 tccactaacatcctccaacaccatttccctagtaatgcaacattaaacttcctcaacctcctaacccccaaccctcca 35122144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 15862042 - 15861974
Alignment:
Q  238 attaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    |||||| |||||||||||| ||||||| |||||||||| | ||||||| || ||||| ||| |||||||    
T  15862042 attaaataaagattcaatggaagagataatacctgacgaatctttgaagaaagaaagagcacagacagg 15861974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 338
Target Start/End: Original strand, 36256578 - 36256658
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||||||  |||||  ||||| ||||| |||||||| |||||||||||||| || |||| ||| ||||||| ||||||||    
T  36256578 aagagattgcacctgttggagccttgaagaaggaaagagcatagacaggtagcgcggtcaagacagactttaaaagaatca 36256658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 38708205 - 38708241
Alignment:
Q  90 acctccaacaccatttacccaacaaagcaatgttaaa 126  Q
    ||||||||||||||||||| |||||||||||||||||    
T  38708205 acctccaacaccatttacctaacaaagcaatgttaaa 38708241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 301
Target Start/End: Original strand, 6885716 - 6885759
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcatag 301  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||    
T  6885716 aagagattatacctgatggagctttgaagaaggaaagagcatag 6885759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 30509557 - 30509486
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcc 156  Q
    ||||||||||||||||||||| || | |||||| |  ||||| ||| ||||| || ||||||||||||||||    
T  30509557 taacaacctccaacaccatttccctagcaaagctacattaaattccttcaacttcctaacccccaaccctcc 30509486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 30549897 - 30549826
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcc 156  Q
    ||||||||||||||||||||| || | |||||| |  ||||| ||| ||||| || ||||||||||||||||    
T  30549897 taacaacctccaacaccatttccctagcaaagctacattaaattccttcaacttcctaacccccaaccctcc 30549826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 31864414 - 31864469
Alignment:
Q  80 tccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaa 135  Q
    |||| ||||| ||||||||||||||||||||||| | |||| ||||||||| ||||    
T  31864414 tccactaacatcctccaacaccatttacccaacataacaatattaaactccttcaa 31864469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 26262386 - 26262337
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctca 134  Q
    ||||| ||||||||||||||| || ||||||||| | |||||||||||||    
T  26262386 taacatcctccaacaccattttcctaacaaagcagtattaaactccctca 26262337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 476852 - 476892
Alignment:
Q  94 ccaacaccatttacccaacaaagcaatgttaaactccctca 134  Q
    ||||||||||||||| ||||||||| | |||||||||||||    
T  476852 ccaacaccatttacctaacaaagcactattaaactccctca 476892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 7962281 - 7962369
Alignment:
Q  218 ccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    ||||| |||||||| || ||||| || | |||||||||  |||| |  |||||||||||||| |||||||| ||||| ||||| |||||    
T  7962281 ccccccccccaaaaaaaattatttaaaatagattcaatagaagaaacaatacctgacggagccttgaaaaaagaaagagcataaacagg 7962369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 3798 - 4135
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||||||||||| |||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3798 actccggcccccaacctccaaacctccatccgtcacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaaccgccaacac 3897  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||| || ||||| |||||||||||||||||| ||||    
T  3898 catttacccaacaaagcaatgttaaactccctcaatctcgtaacctccaaccctccatactccttccgcaaactcagagtatcccacctaacccaagata 3997  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3998 tttttcttttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcata 4097  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4098 gacaggtagagcagtcaggacggactttagaagaatca 4135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 237; Significance: 1e-131; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 2554152 - 2554488
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||    
T  2554152 actccggcccccatcctccaaacctccatccgccacaccatacctagccactaacacctttctccacaaagcttccctctccaataacaactgccaacac 2554251  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  2554252 catttacccaacaaagcaatgttaaactctctcaacctcgtaaccctcaaccctccatactccttcctcatactcaaagtatcccacctaacccaagata 2554351  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  2554352 -tttttctttttcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacccgacggagctttgaaaaaggaaagtgcata 2554450  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  2554451 gacaggtagagcagtcaggacgaactttagtagaatca 2554488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 11 - 337
Target Start/End: Complemental strand, 24766998 - 24766672
Alignment:
Q  11 ccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacaccatttaccca 110  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||||||||| ||||||||| ||||| || | |||||||| ||||||||||||||| |    
T  24766998 ccatcctccaaacctccatccgccacaccatacctagccaccaacacctttcgccacaaagcttccctatctagtaacaaccgccaacaccatttaccta 24766899  T
Q  111 acaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggatannnnnnnnnn 210  Q
    |||||||||  |||||||| || |||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||| | | || |              
T  24766898 acaaagcaacattaaactctcttaacctcgtaacccccaaccctccatactccttcctcagactcaaagtatcccacctaatctaagaaatttttctttt 24766799  T
Q  211 nncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtaga 310  Q
      |||||||| |||||||||| |||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24766798 atcctcaccctctccccaaaaaaatttatttaacaaagatttaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtaga 24766699  T
Q  311 gcagtcaggacggactttagaagaatc 337  Q
    |||||||||||||||||||||||||||    
T  24766698 gcagtcaggacggactttagaagaatc 24766672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 13938265 - 13938601
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||| | | ||||||  |||| ||||| | ||||||||||||||||    
T  13938265 actccggcccccatcctccaaaccaccatccgccgcaccatacctagccactaacaccctacgccacaac-catctctctctactaacaacctccaacac 13938363  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||| |  |||||||||||||||||||| ||||| ||| |||| |||| |||||| |||| |||||||| ||  |||| || ||| |||| ||| ||||    
T  13938364 cattttcttaacaaagcaatgttaaactctctcaatctcctaacacccatccctccgtactccttcctcaaacataaagaattccaactaatccacgata 13938463  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||  || |||| ||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  13938464 tttttcttttatcctcacttccccccccaaaaaatttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcata 13938563  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    || ||| || ||||||||||| || || ||||| ||||    
T  13938564 gataggaagtgcagtcaggacagatttgagaaggatca 13938601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 17605928 - 17605591
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||  |||||| | ||||||||| |  |||| || | ||||| || |||||||    
T  17605928 actccggcccccatcctccaaaccaccatcctccacgccatacctagccaacaacaccctactccacaaacctcccctatcaactaacagccaccaacac 17605829  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||| ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| | |||||| || ||||| |  ||| | |||||| || |    
T  17605828 catttccccaacaaagcaatgttaaactctctcaacctcctaacacccaaccctccatactccctcctcaaacacaaagaactccaaccaacccaagaaa 17605729  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                | ||||  || |||||||| || ||||| ||||||||||||||  |||||||||||||||| |||||||||||||||||||| |||||    
T  17605728 tctttcttttatcatcacaacccccccaaaaaaaattatttaacaaagattcaatagaagagattatacctgatggagctttgaaaaaggaaagcgcata 17605629  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
    |||||| || ||||||| ||| || || ||||| ||||    
T  17605628 gacaggaagcgcagtcaagacagatttgagaagtatca 17605591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 17577312 - 17576974
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||| |||||||||||||||||||  |||||||||| |||||||||||||  |||||| | ||||||||| |  |||| || | ||||| ||||||||||    
T  17577312 actctggcccccatcctccaaaccatcatcctccacgccatacctagccaacaacaccctactccacaaacctcccctatcaactaacagcctccaacac 17577213  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctc--ttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccagga 198  Q
    ||||| ||||||||||||||||||||||| | |||||||   |||| ||||||||||||| || | ||||||  | || || |  ||| | |||||| ||    
T  17577212 catttccccaacaaagcaatgttaaactctcgcaacctcctataacacccaaccctccatgctccctcctcaagcacacagaactccaaccaacccacga 17577113  T
Q  199 tannnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgca 298  Q
     |            ||||||  || |||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |    
T  17577112 aatctttcttttatcctcacatcccccccaaaa-aatttattaaacaaagattcaatagaagagattatacctgacggagctttgaaaaaggaaagtgaa 17577014  T
Q  299 tagacaggtagagcagtcaggacggactttagaagaatca 338  Q
    |||||||| || ||||||| ||| || || || |||||||    
T  17577013 tagacaggaagcgcagtcaagacagatttgagcagaatca 17576974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 26 - 338
Target Start/End: Complemental strand, 21629691 - 21629379
Alignment:
Q  26 ccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaa 125  Q
    ||||||||||| |||||||||||||  |||||| | ||||||||| |   ||| || | ||||| || ||||||| |||| |||||||||||||||||||    
T  21629691 ccatcctccacgccatacctagccaacaacaccctactccacaaacctcacctatcaactaacagccgccaacacaatttccccaacaaagcaatgttaa 21629592  T
Q  126 actccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggatannnnnnnnnnnncctcaccccctcc 225  Q
    |||| ||||||||| |||| |||||||||||||||| | |||||| || ||||| |  ||| | |||||| || |            ||||||  || ||    
T  21629591 actctctcaacctcctaacacccaaccctccatactccctcctcaaacacaaagaactccaaccaacccaagaaatctttcttttatcctcacaaccccc 21629492  T
Q  226 ccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggac 325  Q
    |||||| || ||||| ||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||| ||     
T  21629491 ccaaaaaaaattatttaacaaggattcaatagaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggaagcgcagtcaagacagat 21629392  T
Q  326 tttagaagaatca 338  Q
    || ||||| ||||    
T  21629391 ttgagaagtatca 21629379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 18682168 - 18681863
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||| |||||||| | ||| ||  | || || || | ||||||||||||||||    
T  18682168 actccggcccccatcctccaaacctccatcctccgaaccatacctggccaccaacaccttacaccataacccctctctgtcaactaacaacctccaacac 18682069  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    ||||| || ||||||||| ||||||| ||||||||||||  ||  |||||||||  ||||| |||||||||||  | || || ||| |||  ||| || |    
T  18682068 cattttcctaacaaagcagtgttaaaatccctcaacctccgaaaacccaaccctttatactccttcctcatacaaatagaattccatctagtccaagaaa 18681969  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                |||||| |||||||||||| |||||||| |||||||||||||||  |||||||||||| || |||||||||||||||||||| || ||    
T  18681968 tttttcttttatcctcactccctccccaaaaaaatttatttaacaaagattcaatgggagagattatacccgatggagctttgaaaaaggaaagagcgta 18681869  T
Q  301 gacagg 306  Q
    ||||||    
T  18681868 gacagg 18681863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 10576844 - 10576666
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||  |||||| | |||| |||| |  |||| || | ||||| || |||||||    
T  10576844 actccggcccccatcctccaaaccaccatccgccacaccatacctagccaacaacaccctactccgcaaacctcccctatcaactaacagccgccaacac 10576745  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaag 179  Q
    ||||| ||||||||| ||||||||||||| ||||||||| |||| |||||||||||||||| | |||||| || |||||    
T  10576744 catttccccaacaaaacaatgttaaactctctcaacctcctaacacccaaccctccatactccctcctcaaacacaaag 10576666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 221 - 335
Target Start/End: Original strand, 19350710 - 19350824
Alignment:
Q  221 cctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcagga 320  Q
    ||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||| |||||||||| || | | |||| |    
T  19350710 cctccccaaaaaaatttattaaacaaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtacatagacaggaagcgaactcagta 19350809  T
Q  321 cggactttagaagaa 335  Q
    | ||||| |||||||    
T  19350810 cagacttaagaagaa 19350824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 213 - 306
Target Start/End: Complemental strand, 14843519 - 14843426
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    |||||| |||||||||||| ||||||||||| | ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  14843519 cctcactccctccccaaaaaaatttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 14843426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 14686390 - 14686295
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggta 308  Q
    |||||| |||||||||||| || |||||||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||| |||||||||||||    
T  14686390 cctcactccctccccaaaaaaaattattaaacatagattcaatgatagagattatacctgacggagccttgaagaaggaaagagcatagacaggta 14686295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 14372585 - 14372425
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||   | ||| ||||||||||||||||||| |||||||| | ||| ||  | |||||||||| |||||| | || ||||    
T  14372585 actccggcccccatcctccaaactttcgtccgccacaccatacctagccaccaacaccttacgccataacccttccctctccactaacaaacgcctacac 14372486  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatact 161  Q
    ||||| || ||||| || |  |||||||| || |||||  |||| ||||||||||||||||    
T  14372485 cattttcctaacaaggctaaattaaactctcttaaccttctaacacccaaccctccatact 14372425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 237 - 333
Target Start/End: Complemental strand, 15956334 - 15956238
Alignment:
Q  237 tattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaag 333  Q
    |||| ||||||||||||||| |||||||||||||| || |||||||||||||||||||| |||| ||||| || ||||| |||||| ||| ||||||    
T  15956334 tatttaacaaagattcaatggaagagattatacctaactgagctttgaaaaaggaaagtacataaacaggaagcgcagttaggacgaactatagaag 15956238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 235 - 306
Target Start/End: Original strand, 25351003 - 25351074
Alignment:
Q  235 tttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    ||||||||| | ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  25351003 tttattaaaaatagattcaatgatagagattatacctgacggagctttgaagaaggaaagagcatagacagg 25351074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 26206106 - 26206213
Alignment:
Q  228 aaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactt 327  Q
    |||| |||||| ||||||||||||||||  | |||||||||||||| ||||||||||| |||||||||||||||||||| | ||  |||||||| || ||    
T  26206106 aaaaaaatttaataaacaaagattcaatagaggagattatacctgatggagctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagattt 26206205  T
Q  328 tagaagaa 335  Q
     |||||||    
T  26206206 gagaagaa 26206213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 224 - 306
Target Start/End: Original strand, 13086312 - 13086394
Alignment:
Q  224 ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    |||||||| || ||||| |||||||||||||||||||||||||||||||| |||||||| || |||||||| ||||| |||||    
T  13086312 ccccaaaaaaaattatttaacaaagattcaatgaaagagattatacctgatggagctttaaagaaggaaagagcataaacagg 13086394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 20882620 - 20882458
Alignment:
Q  9 ccccatcctccaaaccgccatcctccacacc-atacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacaccatttac 107  Q
    |||| ||||||||||| |||||| ||||||  ||||||||| || |||||| | |    |||| |||||||  | | |||||||| ||||||||||||      
T  20882620 ccccgtcctccaaaccaccatccgccacacttatacctagcgaccaacaccctacgttgcaaaccatccctaacaactaacaaccgccaacaccatttct 20882521  T
Q  108 ccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctca 170  Q
    |||||||||||||||||||||| ||||||||| |||| |||| ||||||||||| | ||||||    
T  20882520 ccaacaaagcaatgttaaactctctcaacctcctaacacccatccctccatactccctcctca 20882458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 306
Target Start/End: Complemental strand, 502914 - 502821
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    |||||| ||| |||||||| || |||||||| |||||||||| |  ||||||||||||||||||||||||||| || ||||| |||||||||||    
T  502914 cctcactcccaccccaaaaaaaattattaaataaagattcaagggtagagattatacctgacggagctttgaagaaagaaagagcatagacagg 502821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 224 - 306
Target Start/End: Complemental strand, 11060233 - 11060151
Alignment:
Q  224 ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    |||||||| |||||| |||| ||||| |||||| |||||||||||||||| ||| ||||||| |||||||| |||||||||||    
T  11060233 ccccaaaaaaatttaataaataaagaatcaatggaagagattatacctgatggaactttgaagaaggaaagcgcatagacagg 11060151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 13563276 - 13563214
Alignment:
Q  249 attcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||||| || |||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  13563276 attcaatggaaaagattatacctgacggagctttgaaaaaggaaagagcatagacaggcagag 13563214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 649428 - 649339
Alignment:
Q  240 taaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggacttta 329  Q
    |||| ||||| |||||| |||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||  ||||| || |||||||    
T  649428 taaataaagaatcaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcagaacagacttta 649339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 213 - 318
Target Start/End: Complemental strand, 1104329 - 1104224
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||| |||||||||||| || ||||| || |||||||||||  |||||||| ||||| | ||||||||||| |||||||| ||||||||||  ||||     
T  1104329 cctcactccctccccaaaaaaaattattcaataaagattcaatataagagattgtacctaatggagctttgaagaaggaaagagcatagacagacagaga 1104230  T
Q  313 agtcag 318  Q
    ||||||    
T  1104229 agtcag 1104224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 218 - 311
Target Start/End: Original strand, 15674595 - 15674688
Alignment:
Q  218 ccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    ||||| |||||||| || ||| |||| |||||||||||  | |||||||||||||  ||||||||||| |||||||||||||||||||| ||||    
T  15674595 ccccccccccaaaaaaaattaataaataaagattcaatagaggagattatacctgctggagctttgaagaaggaaagtgcatagacaggcagag 15674688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 31292571 - 31292499
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccat 158  Q
    ||||| ||||||||||||||| |||||||||| ||||||||| || | ||||||||||||||||||||||||||    
T  31292571 taacatcctccaacaccattt-cccaacaaagaaatgttaaattctcccaacctcttaacccccaaccctccat 31292499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 13086170 - 13086241
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    |||| |||||||||||||||||| ||||||||||  ||||||||| ||||| || |||||||||||||||||    
T  13086170 aacatcctccaacaccatttacctaacaaagcaacattaaactccttcaacttcctaacccccaaccctcca 13086241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 21549605 - 21549696
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
    |||||| ||| |||||||| || ||||| || |||||||||||| |||||||||||||||  ||||||||||| || ||||| |||||||||    
T  21549605 cctcactcccaccccaaaaaaaattattcaataaagattcaatggaagagattatacctgttggagctttgaagaaagaaagagcatagaca 21549696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 213 - 306
Target Start/End: Original strand, 26514482 - 26514576
Alignment:
Q  213 cctcaccccctccccaaaagaattta-ttaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    |||||| |||||||||||| |||||  ||||| | ||||||||||| ||||| |||||||||| |||||||||| || ||||| |||||||||||    
T  26514482 cctcactccctccccaaaaaaattttgttaaaaatagattcaatgatagagagtatacctgacagagctttgaagaaagaaagagcatagacagg 26514576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 14372344 - 14372293
Alignment:
Q  242 aacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaa 293  Q
    |||| |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  14372344 aacagagattcaatggaagagattatacctggcggagctttgaaaaaggaaa 14372293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 33640675 - 33640773
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||| ||| |||||||| || |||||||| |||||||||| |  ||| |||||||| ||| |||||||||| || ||||| ||||||||||| ||||    
T  33640675 cctcactcccaccccaaaaaaaattattaaataaagattcaagggtagaaattatacccgacagagctttgaagaaagaaagagcatagacaggcagag 33640773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 213 - 338
Target Start/End: Complemental strand, 1308049 - 1307924
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||| ||| |||||||| || ||| | || | |||||||||| |||||||||||||||  |||||| ||||||| |||||  | |||||||| || |     
T  1308049 cctcactcccaccccaaaaaaaattaattaaaatagattcaatggaagagattatacctgctggagctctgaaaaaagaaaggacgtagacaggcagtga 1307950  T
Q  313 agtcaggacggactttagaagaatca 338  Q
    || |||||||||||| || |||||||    
T  1307949 agacaggacggacttaaggagaatca 1307924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 242 - 338
Target Start/End: Original strand, 11469360 - 11469450
Alignment:
Q  242 aacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||||||||||||| ||||||||| |||||| ||||||||||| |||||||| |      |||| |||| ||||||||| || |||||||||||||    
T  11469360 aacaaagattcaatggaagagattaaacctgatggagctttgaagaaggaaagag------caggaagagaagtcaggactgattttagaagaatca 11469450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 233 - 338
Target Start/End: Complemental strand, 12673481 - 12673376
Alignment:
Q  233 aatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaa 332  Q
    |||||||| || | |||||| ||| ||||||||||||  || ||| | ||||| |||||||| ||||||||||| ||||||||||||||  || ||||||    
T  12673481 aatttattcaaaagagattctatggaagagattatactagatggatcgttgaagaaggaaagagcatagacaggcagagcagtcaggacatacattagaa 12673382  T
Q  333 gaatca 338  Q
    | ||||    
T  12673381 ggatca 12673376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 240 - 305
Target Start/End: Complemental strand, 17078422 - 17078357
Alignment:
Q  240 taaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacag 305  Q
    |||| ||||| |||||| |||||||||||||||| ||||||||||| |||||||| ||||| ||||    
T  17078422 taaataaagaatcaatggaagagattatacctgatggagctttgaagaaggaaagcgcataaacag 17078357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 213 - 338
Target Start/End: Complemental strand, 33753553 - 33753428
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||||||| |||||||| || |||  ||  | |||||| ||| |||||||||||||||  ||||||||||||||||| || || |||||||| || |     
T  33753553 cctcacccccaccccaaaaaaaattaagaagaatagattcgatggaagagattatacctgcgggagctttgaaaaaggatagggcgtagacaggcagtga 33753454  T
Q  313 agtcaggacggactttagaagaatca 338  Q
    || ||||||| | || ||||||||||    
T  33753453 agacaggacgaatttaagaagaatca 33753428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 1104457 - 1104385
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    |||||| ||||||||||||||||| ||||||||| |||||| |||||||| |  | ||||||| |||||||||    
T  1104457 taacaaactccaacaccatttacctaacaaagcagtgttaatctccctcatctgcctaaccccaaaccctcca 1104385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 17228622 - 17228694
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccat 158  Q
    |||| |||||||  |||||| || ||||||| ||| |||||||||||||||||||| |||||||| |||||||    
T  17228622 aacaccctccaaacccatttccctaacaaagaaatattaaactccctcaacctcttcacccccaaacctccat 17228694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 338
Target Start/End: Original strand, 32186467 - 32186566
Alignment:
Q  239 ttaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatca 338  Q
    ||||| |||| ||||||| ||||||||||| ||| |||||||||||| || ||||| |  |||||||| || |  |||||||| ||||| ||||||||||    
T  32186467 ttaaataaagtttcaatggaagagattatatctgtcggagctttgaagaaagaaagagtgtagacaggaagcgaggtcaggacagacttaagaagaatca 32186566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 21549478 - 21549551
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccat 158  Q
    ||||| |||||||||||||||||| |  |||||||| ||||||||| |||| ||| | |||||||| |||||||    
T  21549478 taacatcctccaacaccatttacctagtaaagcaatattaaactccttcaatctcctcacccccaaacctccat 21549551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 34434899 - 34434944
Alignment:
Q  94 ccaacaccatttacccaacaaagcaatgttaaactccctcaacctc 139  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  34434899 ccaacaccatttacctaacaatgcaatattaaactccctcaacctc 34434944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 10362927 - 10363026
Alignment:
Q  235 tttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaaga 334  Q
    ||||||||| | ||| |||||| |||| ||||||  ||||||| | ||||| |||||||| ||||||||||||||||  |||| ||| ||||| ||||||    
T  10362927 tttattaaaaatagaatcaatggaagaaattatat-tgacggaaccttgaagaaggaaagagcatagacaggtagagaggtcaagacagacttgagaaga 10363025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 19616227 - 19616163
Alignment:
Q  247 agattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||||||| |||||||||||||||  |||||| | ||||| ||||| ||||||||||| ||||    
T  19616227 agattcaatggaagagattatacctgcaggagctctaaaaaaagaaagggcatagacaggcagag 19616163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 32197828 - 32197892
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaa 150  Q
    ||||||||||| ||||||||||||| |||||| || ||||||||||| |  ||| ||||||||||    
T  32197828 aacaacctccagcaccatttacccagcaaagccatattaaactccctaattctcctaacccccaa 32197892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 311
Target Start/End: Complemental strand, 12687081 - 12687036
Alignment:
Q  266 atacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||||| |||| ||||||||||||||| ||||||||||| ||||    
T  12687081 atacctgatggagttttgaaaaaggaaagagcatagacaggcagag 12687036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 13413694 - 13413767
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccat 158  Q
    ||||| || |||||||||||| || |||||||  | ||||||||| | ||||||||| |||||||| |||||||    
T  13413694 taacatccgccaacaccattttcctaacaaagacaagttaaactctcccaacctctttacccccaatcctccat 13413767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 32198012 - 32198053
Alignment:
Q  265 tatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    |||||||||||||||||||||||| ||||| ||||| |||||    
T  32198012 tatacctgacggagctttgaaaaaagaaagagcataaacagg 32198053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 157
Target Start/End: Original strand, 33805405 - 33805482
Alignment:
Q  80 tccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    |||| ||||| ||||||||||||||| || | ||| ||||  ||||||||| ||||| || | |||||||||||||||    
T  33805405 tccactaacatcctccaacaccatttccctagcaatgcaacattaaactccttcaacttcctgacccccaaccctcca 33805482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 90 - 126
Target Start/End: Complemental strand, 19616384 - 19616348
Alignment:
Q  90 acctccaacaccatttacccaacaaagcaatgttaaa 126  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  19616384 acctccaacaccatttacctaacaaagcaatattaaa 19616348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 27104181 - 27104141
Alignment:
Q  266 atacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    |||||||| ||||| |||||||||||||| |||||||||||    
T  27104181 atacctgatggagccttgaaaaaggaaagagcatagacagg 27104141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 27145995 - 27145955
Alignment:
Q  266 atacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    |||||||| ||||| |||||||||||||| |||||||||||    
T  27145995 atacctgatggagccttgaaaaaggaaagagcatagacagg 27145955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 134; Significance: 2e-69; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 5 - 338
Target Start/End: Original strand, 94 - 427
Alignment:
Q  5 cggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacaccatt 104  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||| |||||||| | ||||||  |||| || || | ||||||||||||||||||||    
T  94 cggcccccatcctccaaaccaccatcctccacaccatacctaaccaccaacaccttacgccacaatccatctctatctactaacaacctccaacaccatt 193  T
Q  105 tacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggatannnn 204  Q
    | || |||||||||||||||||||| ||||||||| |||| |||||||||||||||| | |||||| || ||||| || ||| | || ||| || |        
T  194 tccctaacaaagcaatgttaaactctctcaacctcctaacacccaaccctccatactccctcctcaaacacaaagaattccaaccaatccaagaaatttt 293  T
Q  205 nnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
            ||||||  || |||||||| |||||||| ||||||||||||||  |||||||||||| |||||||||||||||||||||||| |||||||||    
T  294 tcttttttcctcactacccccccaaaaaaatttatttaacaaagattcaattgaagagattatacttgacggagctttgaaaaaggaaagagcatagaca 393  T
Q  305 ggtagagcagtcaggacggactttagaagaatca 338  Q
    || || ||||| |||||||| || ||||||||||    
T  394 ggaagcgcagttaggacggatttgagaagaatca 427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 2e-57; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 14440290 - 14440627
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||  |||||| | | ||||||| || |||| || | |||||| | |||||||    
T  14440290 actccggcccccatcctccaaaccaccatccgccataccatacctagccaacaacaccctacaccacaaaccacccctatcaactaacaaacgccaacac 14440389  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaagtatcccacctaacccaggata 200  Q
    |||||  |||||| ||||||||||||||| ||||||||| |||| |||||||||||||||| | |||||| || ||||| |  ||| | |||||| || |    
T  14440390 catttcaccaacagagcaatgttaaactctctcaacctcctaacacccaaccctccatactccctcctcaaacacaaagaactccaaccaacccaagaaa 14440489  T
Q  201 nnnnnnnnnnnncctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
                ||||||  || |||||||| |||||||| ||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||    
T  14440490 tctttcttttttcctcacaacccccccaaaaaaatttatttaacaaagattcaatagaagagattatacctgacggagctttaaaaaaggaaagtgcata 14440589  T
Q  301 gacaggtagagcagtcaggacggactttagaagaatca 338  Q
     ||||| || ||||||| |||||| || ||||| ||||    
T  14440590 aacaggaagcgcagtcaagacggatttgagaagtatca 14440627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 236 - 338
Target Start/End: Complemental strand, 33515552 - 33515450
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    ||||| |||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||  ||||||    
T  33515552 ttatttaacaaagatttaatggaagagattgtacctgacggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacggatttgcgaagaa 33515453  T
Q  336 tca 338  Q
    |||    
T  33515452 tca 33515450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 228 - 333
Target Start/End: Original strand, 28253502 - 28253607
Alignment:
Q  228 aaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactt 327  Q
    |||| |||||| | |||| |||||||||| |||||||||||||||||| | |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  28253502 aaaaaaatttaattaacagagattcaatggaagagattatacctgacgaaactttgaaaaaggaaagtgcatagacatgaagagcagtcaggacggactt 28253601  T
Q  328 tagaag 333  Q
     |||||    
T  28253602 gagaag 28253607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 236 - 336
Target Start/End: Original strand, 12646331 - 12646431
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    ||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||| || ||||| |||||||| || |||||||    
T  12646331 ttatttaacaaagattcaatggaagagattatacctggcggagctttgaaaaaggaaagagcatagacaggaagcgcagttaggacggatttgagaagaa 12646430  T
Q  336 t 336  Q
    |    
T  12646431 t 12646431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 26 - 179
Target Start/End: Original strand, 12646092 - 12646245
Alignment:
Q  26 ccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaa 125  Q
    |||||||||||||| ||||||||||| |||||| |   ||||||  |||| || || | ||||||||||||||||||||| || |||||| ||| |||||    
T  12646092 ccatcctccacaccttacctagccaccaacaccctataccacaatccatctctatctactaacaacctccaacaccattttcctaacaaaacaaagttaa 12646191  T
Q  126 actccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaag 179  Q
    |||| ||||||||| |||| |||||||||||||||| | |||||| || |||||    
T  12646192 actctctcaacctcctaacacccaaccctccatactccctcctcaaacacaaag 12646245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 33515800 - 33515623
Alignment:
Q  2 ctccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacacc 101  Q
    ||||| ||||||||||||||||| |||||| ||||||||||||||||||| |||||| | | ||||||  |||| || || | ||||||||  |||||||    
T  33515800 ctccgacccccatcctccaaaccaccatccgccacaccatacctagccaccaacaccctacgccacaacccatctctatcaactaacaaccgtcaacacc 33515701  T
Q  102 atttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttcttcctcatactcaaag 179  Q
    |||| || | |||||||||||||||||| || || ||| |||| |||| ||| ||||||| | |||||| || |||||    
T  33515700 atttccctagcaaagcaatgttaaactctcttaatctcctaacacccagccccccatactccctcctcaaacacaaag 33515623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 28253266 - 28253426
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||   |||||||| | ||| ||  | |||||||||| |||||| | |||||||    
T  28253266 actccggcccccatcctccaaacctccatccgccacaccatacctagccctcaacaccttacgccataacccttccctctccactaacaaacgccaacac 28253365  T
Q  101 catttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatact 161  Q
    ||||| || ||||  || |  |||||||| ||||||||| | || ||||||||||||||||    
T  28253366 cattttcctaacagggctaaattaaactctctcaacctccttacacccaaccctccatact 28253426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 213 - 306
Target Start/End: Original strand, 15018435 - 15018528
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    ||||||||||  ||||||| ||  ||||||| ||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15018435 cctcacccccatcccaaaaaaaaatattaaataaagattcaatggtagagattatacctgacggagctttgaagaaggaaagtgcatagacagg 15018528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 224 - 335
Target Start/End: Original strand, 26146984 - 26147095
Alignment:
Q  224 ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacgg 323  Q
    |||||||| |||||| |||| | ||| |||| | |||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||  |||| ||| |    
T  26146984 ccccaaaaaaatttagtaaaaatagagtcaacggaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaagacag 26147083  T
Q  324 actttagaagaa 335  Q
    ||||||||||||    
T  26147084 actttagaagaa 26147095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 338
Target Start/End: Complemental strand, 28399932 - 28399807
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||| ||| |||||||| || ||||| || |||||||||||| |||||||||||||||  ||||||||||| || ||||| ||||||||||| ||||     
T  28399932 cctcactcccaccccaaaaaaaattattcaataaagattcaatggaagagattatacctgctggagctttgaagaaagaaagagcatagacaggcagaga 28399833  T
Q  313 agtcaggacggactttagaagaatca 338  Q
     ||||| || || ||||| |||||||    
T  28399832 tgtcagaactgattttaggagaatca 28399807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 8065643 - 8065551
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacag 305  Q
    |||||| ||| |||||||| || ||||| || |||||||||||| |||||||||||||||| ||||||||||| |||||||  ||||||||||    
T  8065643 cctcactcccaccccaaaaaaaattattcaataaagattcaatggaagagattatacctgatggagctttgaagaaggaaaaagcatagacag 8065551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 9668515 - 9668447
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccct 154  Q
    |||| |||||||||| ||||||| |||||||||| ||||||||||||||||||| ||||||||||||||    
T  9668515 aacatcctccaacactatttacctaacaaagcaaagttaaactccctcaacctcctaacccccaaccct 9668447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 22724821 - 22724729
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacag 305  Q
    ||||||||| ||||||||| || ||||||||||| |||||||||  ||||||||||||| ||| |||||| || |||||||| ||||||||||    
T  22724821 cctcaccccatccccaaaaaaaattattaaacaatgattcaatggtagagattatacctaacgaagctttaaagaaggaaagagcatagacag 22724729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 215 - 335
Target Start/End: Complemental strand, 25380774 - 25380654
Alignment:
Q  215 tcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcag 314  Q
    |||||||| ||| |||| |||||||| || |||||||||||  |||||||||||||||| ||||||||||| || ||||||||||||| ||| |||  ||    
T  25380774 tcacccccaccctaaaaaaatttattcaataaagattcaatagaagagattatacctgatggagctttgaagaaagaaagtgcatagagaggcagataag 25380675  T
Q  315 tcaggacggactttagaagaa 335  Q
    ||| ||| || || |||||||    
T  25380674 tcaagacagatttgagaagaa 25380654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 240 - 335
Target Start/End: Original strand, 13551367 - 13551462
Alignment:
Q  240 taaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    ||||||||||||||||  | |||||||||||||| ||||||||||| |||||||||||||||||||| | ||  |||||||| || || |||||||    
T  13551367 taaacaaagattcaatagaggagattatacctgatggagctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaa 13551462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 213 - 338
Target Start/End: Complemental strand, 3153201 - 3153076
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||| ||| |||||||| |||||| | || | |||||||||| |||||||||||||||  |||||||||||||| ||||| || |||||||| || |     
T  3153201 cctcactcccaccccaaaaaaatttaattaaaatagattcaatggaagagattatacctgcgggagctttgaaaaaagaaagggcgtagacaggcagcga 3153102  T
Q  313 agtcaggacggactttagaagaatca 338  Q
    || |||||| ||||| || |||||||    
T  3153101 agacaggacagacttaaggagaatca 3153076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 37445639 - 37445792
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||||||||||||||||||| |  |  |||||| |||||||||||||||| |||||| | | ||| ||  |||| || || | |||||  | |||||||    
T  37445639 actccggcccccatcctccaacctcctgtcctccgcaccatacctagccaccaacaccctacgccagaacccatcactatcaactaacagacgccaacac 37445738  T
Q  101 catttaccc-aacaaagcaatgttaaactccctcaacctcttaacccccaaccc 153  Q
    ||||| ||| ||||||||  ||||||||||||||||| || |||||||||||||    
T  37445739 catttcccccaacaaagcggtgttaaactccctcaacttcctaacccccaaccc 37445792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 224 - 317
Target Start/End: Original strand, 45422289 - 45422382
Alignment:
Q  224 ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtca 317  Q
    |||||||| || | |||||| |||||||||| | |||| ||||||||||| ||||||||||| || ||||| |||||||||||||||| |||||    
T  45422289 ccccaaaaaaaatgattaaataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 45422382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 9668388 - 9668296
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacag 305  Q
    |||||| ||| |||||||| || ||||| ||||||||||||||| ||||||||||| |||| |||||||| || ||||| || ||||||||||    
T  9668388 cctcactccccccccaaaaaaaattattcaacaaagattcaatggaagagattatatctgatggagctttaaagaaggacagagcatagacag 9668296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 300
Target Start/End: Original strand, 11197109 - 11197197
Alignment:
Q  213 cctcaccccctccccaaaagaatt-tattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
    |||||| |||||||||||| || | ||||||||| ||||||||||| ||||||||||||||||||||| ||||| || ||||| |||||    
T  11197109 cctcactccctccccaaaaaaaatgtattaaacatagattcaatgatagagattatacctgacggagccttgaagaatgaaagagcata 11197197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 11233992 - 11233928
Alignment:
Q  93 tccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    |||||||||||||||| ||||||||||  ||||||||||||||| || |||||||||||||||||    
T  11233992 tccaacaccatttacctaacaaagcaaaattaaactccctcaacttcctaacccccaaccctcca 11233928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 306
Target Start/End: Complemental strand, 33583765 - 33583717
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33583765 aagagattatacctgacggagctttgaaaaaggaaagagcatagacagg 33583717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 219 - 306
Target Start/End: Complemental strand, 11233865 - 11233778
Alignment:
Q  219 cccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    |||| |||||||| || ||||| ||||||||||||||| |||||| ||||||||| |||||||| || |||||||| ||||| |||||    
T  11233865 cccccccccaaaaaaaattattcaacaaagattcaatggaagagactatacctgatggagctttaaagaaggaaagagcataaacagg 11233778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 338
Target Start/End: Complemental strand, 2207204 - 2207079
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||| ||| |||||||| ||||||   || | ||| |||||| |||||||| ||||||  ||||| ||||| |||||||| |||||||||||||| ||    
T  2207204 cctcactccccccccaaaaaaatttagataaaatagaatcaatggaagagattgtacctgctggagccttgaagaaggaaagagcatagacaggtagcgc 2207105  T
Q  313 agtcaggacggactttagaagaatca 338  Q
     | || ||||||||||| ||||||||    
T  2207104 ggacaagacggactttacaagaatca 2207079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 33583934 - 33583861
Alignment:
Q  88 caacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatact 161  Q
    ||||||||||||||||||||  |||||||| || |||||||||||||||  | | |||||||||||||||||||    
T  33583934 caacctccaacaccatttacttaacaaagctatattaaactccctcaactgccttacccccaaccctccatact 33583861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 247 - 336
Target Start/End: Complemental strand, 44028561 - 44028472
Alignment:
Q  247 agattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaat 336  Q
    |||||||||  |||||||||||| ||| ||||| ||||| |||||||| |||||||||| |||||| |||| ||| |||||||| |||||    
T  44028561 agattcaatagaagagattatacatgatggagccttgaagaaggaaagagcatagacagatagagcggtcaagacagactttaggagaat 44028472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 35488619 - 35488689
Alignment:
Q  236 ttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    ||||| || |||||||||||| |||||||||||||||| |||||||| || |||||||  |||||||||||    
T  35488619 ttattcaataaagattcaatggaagagattatacctgaaggagctttaaagaaggaaaaagcatagacagg 35488689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 20004589 - 20004662
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccat 158  Q
    ||||| |||||||||||||||  | ||||||||| ||||||||||||||| | || |||||||||| |||||||    
T  20004589 taacatcctccaacaccatttttctaacaaagcagtgttaaactccctcatcttcctaacccccaaacctccat 20004662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 35488467 - 35488540
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccat 158  Q
    |||||||||||||||||||||||| |  |||||||  ||||||||| ||||| || |||||||||| |||||||    
T  35488467 taacaacctccaacaccatttacctagtaaagcaacattaaactccttcaacttcctaacccccaaacctccat 35488540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 311
Target Start/End: Original strand, 43311062 - 43311115
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  43311062 aagaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagag 43311115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 6824207 - 6824262
Alignment:
Q  251 tcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    ||||||| ||| || |||| ||||||||||||||| ||||||||||||||||||||    
T  6824207 tcaatgagagaaataatacttgacggagctttgaagaaggaaagtgcatagacagg 6824262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 224 - 335
Target Start/End: Original strand, 10689307 - 10689418
Alignment:
Q  224 ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacgg 323  Q
    |||||||| |||||| |||| | ||| |||| | || | ||||||| ||||||| | ||||| |||||||| ||||||||||||||||  |||| |||      
T  10689307 ccccaaaaaaatttagtaaaaatagagtcaagggaataaattatacatgacggatccttgaagaaggaaagagcatagacaggtagagaggtcaagacat 10689406  T
Q  324 actttagaagaa 335  Q
    ||||||||||||    
T  10689407 actttagaagaa 10689418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 338
Target Start/End: Original strand, 13416478 - 13416569
Alignment:
Q  247 agattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaatca 338  Q
    |||||| ||| |||||||| ||||||  ||||| ||||| |||||||| ||||||||| |||| || |||| ||  ||||||||||||||||    
T  13416478 agattctatggaagagattgtacctgctggagccttgaagaaggaaagagcatagacatgtagcgcggtcaagatagactttagaagaatca 13416569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 37437629 - 37437688
Alignment:
Q  94 ccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccc 153  Q
    |||||||||||| |||||||||||  ||||||||||||||||| |  |||||||||||||    
T  37437629 ccaacaccatttccccaacaaagcggtgttaaactccctcaactttctaacccccaaccc 37437688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 165
Target Start/End: Complemental strand, 28400060 - 28399980
Alignment:
Q  85 taacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccatacttctt 165  Q
    ||||| |||||||||||||||||| |  |||||||| ||||||||| |||| | | |||||||||| |||||| ||| |||    
T  28400060 taacatcctccaacaccatttacctagtaaagcaatattaaactccttcaatcgcctaacccccaaacctccaaactcctt 28399980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 308
Target Start/End: Original strand, 34357602 - 34357661
Alignment:
Q  249 attcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggta 308  Q
    |||||||| |||| |||||| || ||||||| ||||| |||||||| |||||||||||||    
T  34357602 attcaatggaagaaattatatctaacggagccttgaagaaggaaagagcatagacaggta 34357661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 26146761 - 26146895
Alignment:
Q  1 actccggcccccatcctccaaaccgccatcctccacaccatacctagccactaacacctttctccacaaagcatccctctccaataacaacctccaacac 100  Q
    ||||||||||||| ||||||| |  ||||||||| | ||||| || ||||| |||||| |   |||||||  |  ||||||||  ||||| | |||||||    
T  26146761 actccggcccccaacctccaacctcccatcctcctcgccatatctcgccaccaacaccctataccacaaactactcctctccaccaacaaacgccaacac 26146860  T
Q  101 catttacccaacaaagcaatgttaaactccctcaa 135  Q
    ||||| || ||||| ||||  ||||||||||||||    
T  26146861 catttgcctaacaacgcaacattaaactccctcaa 26146895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 158
Target Start/End: Original strand, 36804728 - 36804822
Alignment:
Q  64 ccacaaagcatccctctccaataacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctccat 158  Q
    ||||||| | || ||||| | ||||| ||||||||||||||| || |  |||||||| ||||||||  ||||| || |||||||||||| |||||    
T  36804728 ccacaaaccttctctctctactaacatcctccaacaccattttcctagtaaagcaatattaaactctttcaacttcctaacccccaaccatccat 36804822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 43722370 - 43722321
Alignment:
Q  251 tcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcata 300  Q
    |||||| |||| ||||||||||||||||| ||||| |||||||| |||||    
T  43722370 tcaatggaagaaattatacctgacggagccttgaagaaggaaagagcata 43722321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 13550748 - 13550812
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaa 150  Q
    |||||||||||||||||||| || ||||| || || ||||||||| |||| ||| | ||||||||    
T  13550748 aacaacctccaacaccatttccctaacaatgctatattaaactccttcaatctcctcacccccaa 13550812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 13551201 - 13551265
Alignment:
Q  86 aacaacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaa 150  Q
    |||||||||||||||||||| || ||||| || || ||||||||| |||| ||| | ||||||||    
T  13551201 aacaacctccaacaccatttccctaacaatgctatattaaactccttcaatctcctcacccccaa 13551265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 20946918 - 20946878
Alignment:
Q  266 atacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    ||||||||||||||||||||||| ||||| ||||| |||||    
T  20946918 atacctgacggagctttgaaaaaagaaagggcataaacagg 20946878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 27335997 - 27335922
Alignment:
Q  228 aaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 304  Q
    |||| ||||||||||| | ||||||| || |||||||||||||||  |||||| ||||||| ||||  |||||||||    
T  27335997 aaaaaaatttattaaa-atagattcagtggaagagattatacctgtaggagctctgaaaaaagaaatggcatagaca 27335922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 43722549 - 43722481
Alignment:
Q  89 aacctccaacaccatttacccaacaaagcaatgttaaactccctcaacctcttaacccccaaccctcca 157  Q
    |||| ||||||||||||||| ||||| ||||  ||||||||||||| | |||  |||||||| ||||||    
T  43722549 aaccgccaacaccatttacctaacaacgcaacattaaactccctcatcttctgcacccccaaacctcca 43722481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 224 - 335
Target Start/End: Original strand, 28543 - 28654
Alignment:
Q  224 ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacgg 323  Q
    |||||||| |||||| |||| | ||| |||| | |||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||  |||| ||| |    
T  28543 ccccaaaaaaatttagtaaaaatagagtcaacggaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaagacag 28642  T
Q  324 actttagaagaa 335  Q
    ||||||||||||    
T  28643 actttagaagaa 28654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 214 - 306
Target Start/End: Original strand, 6850 - 6942
Alignment:
Q  214 ctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    ||||| ||||||| |||| ||  ||||||| | ||||||||||| ||| || ||||||||||||||||||||||||||||| |||||||||||    
T  6850 ctcacaccctcccaaaaaaaaagtattaaaaatagattcaatgagagaaatgatacctgacggagctttgaaaaaggaaagagcatagacagg 6942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 15043 - 14945
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    |||||| ||| || ||||||| |||| | || |||||||||||| |||||||||||||||  ||| ||||||| |||||||| ||||||||||||||||    
T  15043 cctcactcccacctcaaaagattttactcaataaagattcaatggaagagattatacctggtggatctttgaagaaggaaagagcatagacaggtagag 14945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 317
Target Start/End: Original strand, 8374 - 8466
Alignment:
Q  225 cccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtca 317  Q
    ||||||| || | |||||| |||||||||| | |||| ||||||||||| ||||||||||| || ||||| |||||||||||||||| |||||    
T  8374 cccaaaaaaaatgattaaataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtca 8466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 329
Target Start/End: Original strand, 182873 - 182989
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagc 312  Q
    |||||| ||| |||||||| || ||  |||| ||||| | |||| |||||||||||||| | ||||||||||| |||||||||||||||||||| ||||     
T  182873 cctcactccccccccaaaaaaaatttataaataaagaattaatggaagagattatacctaatggagctttgaagaaggaaagtgcatagacaggcagaga 182972  T
Q  313 agtcaggacggacttta 329  Q
     ||||| || |||||||    
T  182973 ggtcagaaccgacttta 182989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 261 - 335
Target Start/End: Original strand, 8338 - 8412
Alignment:
Q  261 agattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||| ||||  |||||||| ||||||| |||||    
T  8338 agattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcaggacagactttaaaagaa 8412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 13272 - 13322
Alignment:
Q  261 agattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagag 311  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  13272 agattatacctgatggagctttgaagaaggaaagcgcatagacaggcagag 13322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 274
Target Start/End: Complemental strand, 33991 - 33930
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgac 274  Q
    |||||| |||||||||||| ||||||||||| | ||||||||||| ||||||||||||||||    
T  33991 cctcactccctccccaaaaaaatttattaaaaatagattcaatgacagagattatacctgac 33930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 224 - 293
Target Start/End: Original strand, 67849 - 67918
Alignment:
Q  224 ccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaa 293  Q
    |||||||||||||| | |||  ||||||||||| |||||||||||||| || |||||||||| |||||||    
T  67849 ccccaaaagaatttttgaaattaagattcaatggaagagattataccttacagagctttgaagaaggaaa 67918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 213 - 306
Target Start/End: Complemental strand, 63681 - 63589
Alignment:
Q  213 cctcaccccctccccaaaagaatttattaaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 306  Q
    |||||| |||||||||||| || || | ||| | |||||||||| |||||||||||||||| | ||| ||||| |||||||| ||||| |||||    
T  63681 cctcactccctccccaaaaaaaatt-taaaaaatagattcaatggaagagattatacctgaagaagccttgaagaaggaaagagcataaacagg 63589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 1137 - 1093
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcataga 302  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||    
T  1137 aagagattatacctgatggagccttgaagaaggaaagtgcataga 1093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 317
Target Start/End: Complemental strand, 3903 - 3826
Alignment:
Q  240 taaacaaagattcaatgaaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtca 317  Q
    |||| ||||| |||| | |||| | ||||||||| ||||||||||| || ||||| ||||||||||| |||| |||||    
T  3903 taaataaagagtcaagggaagaaagtatacctgatggagctttgaagaaagaaagggcatagacaggcagagaagtca 3826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 335
Target Start/End: Original strand, 55468 - 55545
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    |||| ||||||||| | | ||| ||||| |||||||| ||||||||||||||||  |||| ||  |||||||||||||    
T  55468 aagaaattatacctaatgaagccttgaagaaggaaagagcatagacaggtagagaggtcaagatagactttagaagaa 55545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 143165 - 143088
Alignment:
Q  258 aagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaagaa 335  Q
    |||| ||||||||| | | ||| ||||| |||||||| ||||||||||||||||  |||| ||  |||||||||||||    
T  143165 aagaaattatacctaatgaagccttgaagaaggaaagagcatagacaggtagagaggtcaagatagactttagaagaa 143088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University