View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18039_high_4 (Length: 479)

Name: NF18039_high_4
Description: NF18039
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18039_high_4
NF18039_high_4
[»] chr1 (5 HSPs)
chr1 (1-466)||(38286206-38286670)
chr1 (164-292)||(30935008-30935136)
chr1 (149-255)||(19919808-19919914)
chr1 (160-241)||(6508707-6508788)
chr1 (149-228)||(28757024-28757103)
[»] chr7 (5 HSPs)
chr7 (149-299)||(9558837-9558987)
chr7 (150-255)||(9560863-9560968)
chr7 (217-255)||(24541623-24541661)
chr7 (161-230)||(39383819-39383888)
chr7 (161-230)||(45057555-45057624)
[»] chr4 (1 HSPs)
chr4 (150-235)||(53694113-53694198)
[»] chr6 (4 HSPs)
chr6 (152-291)||(1752507-1752646)
chr6 (149-255)||(17593581-17593687)
chr6 (161-230)||(6889017-6889086)
chr6 (161-230)||(10286545-10286614)
[»] scaffold0341 (1 HSPs)
scaffold0341 (160-241)||(2729-2810)
[»] chr2 (6 HSPs)
chr2 (149-216)||(41119787-41119854)
chr2 (161-230)||(18904985-18905054)
chr2 (149-230)||(41118458-41118539)
chr2 (158-286)||(26134825-26134952)
chr2 (161-230)||(26892478-26892547)
chr2 (161-230)||(26897917-26897986)
[»] scaffold0180 (1 HSPs)
scaffold0180 (161-230)||(18692-18761)
[»] chr8 (2 HSPs)
chr8 (161-230)||(3318013-3318082)
chr8 (161-230)||(21524632-21524701)
[»] chr5 (2 HSPs)
chr5 (161-230)||(1155978-1156047)
chr5 (149-189)||(11846347-11846387)
[»] chr3 (1 HSPs)
chr3 (161-230)||(6098413-6098482)


Alignment Details
Target: chr1 (Bit Score: 389; Significance: 0; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 1 - 466
Target Start/End: Original strand, 38286206 - 38286670
Alignment:
Q  1 acttatacaaccatcccattttgtg--taataaaaaatagtgagtaatgtgatatgtatgataagttggtgatctgatcgaaagagagatatagagaaaa 98  Q
    ||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  38286206 acttatacaacaatcccattttgtgtgtaataaaaaatagtgagtaatgtgatatgtatgataagttggtgatctgatcggaagagagatataaagaaaa 38286305  T
Q  99 aataaaccattgaatgtaccttgaaaaattgaaatgtcaaaatattttgccttaattagatatttggtcccttaattaatttttaggtttcgtcttaatc 198  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  38286306 aataaaccattgaatgtgccttgaaaaattgaaatgtcaaaatattttgccttaattagatatttggtcccttaattaattttcaggtttcgttttaatc 38286405  T
Q  199 ccttatttaataaaagttacattttggtccctcaaatatgcttccgtcagtcaatttcatccctctcttttaaatttaacctaaaatgtctaagatagac 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    ||||    
T  38286406 ccttatttaataaaagttacattttggtccctcaaatatgcttccgtcagtcaatttcgtccctctcttttaaatttaacttaaaatgtcta----agac 38286501  T
Q  299 cgttggatccattaaaccaaatatctttgttgactaagaaattacgaaacca-aaatcataggaggaaaactatatatcgtatatcgtgtgattggactg 397  Q
    | ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  38286502 cattggatccattaagccaaatatctttgttgactaagaaattacgaaaccataaatcatacgaggaaaactatatatcgtatatcgtgtgattggactg 38286601  T
Q  398 aggagaatcatacaattcatatttgagatcattttcaaataccaatctatcatgatcaaccctttgcta 466  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38286602 aggagaatcatacaattcatatttgagatcattttcaaataccaatctatcatgatcaaccctttgcta 38286670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 164 - 292
Target Start/End: Complemental strand, 30935136 - 30935008
Alignment:
Q  164 ggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccctcaaatatgcttccgtcagtcaatttcatccctc 263  Q
    ||||||||||||||||| ||||||||   || || ||||| ||||||||||||| | |||||||||| ||| |||||||| | ||||||||| |||  |     
T  30935136 ggtcccttaattaatttataggtttcactttgattccttaattaataaaagttatactttggtcccttaaacatgcttccattagtcaatttgatcattt 30935037  T
Q  264 tcttttaaatttaacctaaaatgtctaag 292  Q
    | | |||| |||||| |||||| ||||||    
T  30935036 tatgttaattttaacttaaaatatctaag 30935008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 149 - 255
Target Start/End: Complemental strand, 19919914 - 19919808
Alignment:
Q  149 cttaattagatatttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccctcaaatatgcttccgtcag 248  Q
    |||||||| | ||||||||||||||||||||   ||||||||| ||  ||||||| ||||||||| || | ||||| ||||| |||| |||||| || ||    
T  19919914 cttaattacacatttggtcccttaattaattcgcaggtttcgttttggtcccttaattaataaaaatttcgttttgttcccttaaatgtgcttctgttag 19919815  T
Q  249 tcaattt 255  Q
    |||||||    
T  19919814 tcaattt 19919808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 6508707 - 6508788
Alignment:
Q  160 atttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccctcaaatatgctt 241  Q
    ||||| |||||||| ||||||||||||||| | ||  || | || ||| |||||||||| ||||||||||||||||||||||    
T  6508707 atttgatcccttaaataatttttaggtttcattttggtctcctaattattaaaagttacgttttggtccctcaaatatgctt 6508788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 28757103 - 28757024
Alignment:
Q  149 cttaattagatatttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtcc 228  Q
    |||||||||| ||||| |||||||||||||||| ||||||  | ||  |||| || ||||||||||||||||| ||||||    
T  28757103 cttaattagacatttgatcccttaattaattttcaggttttattttggtcccctaattaataaaagttacattctggtcc 28757024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 5e-20; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 149 - 299
Target Start/End: Original strand, 9558837 - 9558987
Alignment:
Q  149 cttaattagatatttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccctcaaatatgcttccgtcag 248  Q
    |||||||| ||||||||| ||||||||||||| ||||||||   ||  | ||||| |||||||||||||| ||||||||||| ||||||||||| || ||    
T  9558837 cttaattacatatttggtgccttaattaatttataggtttcactttgtttccttaattaataaaagttacgttttggtcccttaaatatgcttctgttag 9558936  T
Q  249 tcaatttcatccctctcttttaaatttaacctaaaatgtctaagatagacc 299  Q
     ||||||  || ||| |  |||| ||||||| |||||||||| ||| ||||    
T  9558937 ccaatttggtctctcaccattaattttaaccaaaaatgtctatgatggacc 9558987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 255
Target Start/End: Complemental strand, 9560968 - 9560863
Alignment:
Q  150 ttaattagatatttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccctcaaatatgcttccgtcagt 249  Q
    ||||||| |||||||||||| ||||||||||  |||||||   ||  ||||||| |||| |||||||||  |||||||||| |||| ||||||||| ||     
T  9560968 ttaattacatatttggtcccataattaatttacaggtttcactttggtcccttaattaacaaaagttacgatttggtcccttaaatttgcttccgtaagc 9560869  T
Q  250 caattt 255  Q
    ||||||    
T  9560868 caattt 9560863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 255
Target Start/End: Original strand, 24541623 - 24541661
Alignment:
Q  217 acattttggtccctcaaatatgcttccgtcagtcaattt 255  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  24541623 acattttggtcccttaaatatgctttcgtcagtcaattt 24541661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 39383819 - 39383888
Alignment:
Q  161 tttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccct 230  Q
    ||||||||||||| | |||||| |||||||| ||  ||||||| ||| |||||||| | |||||||||||    
T  39383819 tttggtcccttaacttattttttggtttcgttttggtcccttaattattaaaagtttcgttttggtccct 39383888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 45057555 - 45057624
Alignment:
Q  161 tttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccct 230  Q
    ||||||||||||| | |||||| |||||||| || ||||||||  || |||||||| | |||||||||||    
T  45057555 tttggtcccttaacttattttttggtttcgttttgatcccttaactattaaaagtttcgttttggtccct 45057624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 53694198 - 53694113
Alignment:
Q  150 ttaattagatatttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccctcaaat 235  Q
    ||||||| | |||||||||||||||||||||||||||||||| ||  ||||||  ||||||||||||   ||||||||||| ||||    
T  53694198 ttaattatacatttggtcccttaattaatttttaggtttcgttttggtcccttgattaataaaagttttgttttggtcccttaaat 53694113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 291
Target Start/End: Complemental strand, 1752646 - 1752507
Alignment:
Q  152 aattagatatttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccctcaaatatgcttccgtcagtca 251  Q
    ||||||| |||| |||||||||||| |||| |||||| || |||||| |  | |||||||||||| | ||||||| ||  ||||||||||| ||||| ||    
T  1752646 aattagagattttgtcccttaattatttttcaggttttgttttaatctcccaattaataaaagttgcgttttggttccaaaaatatgcttctgtcagcca 1752547  T
Q  252 atttcatccctctcttttaaatttaacctaaaatgtctaa 291  Q
    ||||  || |||| | |||| ||||| | |||||||||||    
T  1752546 atttggtctctctttgttaattttaatcgaaaatgtctaa 1752507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 255
Target Start/End: Original strand, 17593581 - 17593687
Alignment:
Q  149 cttaattagatatttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccctcaaatatgcttccgtcag 248  Q
    |||||||| | ||||| ||||| |||||||||  ||||||| | ||  | || || |||||||||||||| |||| |||||  |||||| ||||||| ||    
T  17593581 cttaattatacatttgatccctgaattaatttgcaggtttcattttggttccctaattaataaaagttacgttttagtcccctaaatatacttccgttag 17593680  T
Q  249 tcaattt 255  Q
    |||||||    
T  17593681 tcaattt 17593687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 6889086 - 6889017
Alignment:
Q  161 tttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccct 230  Q
    ||||||||||||| | | |||| |||||||| ||| |||||||  || |||||||| |||||||||||||    
T  6889086 tttggtcccttaacttacttttgggtttcgttttagtcccttaactattaaaagtttcattttggtccct 6889017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 10286614 - 10286545
Alignment:
Q  161 tttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccct 230  Q
    ||||||||||||| | |||||| |||||||| || ||||||||  || |||||||| | |||||||||||    
T  10286614 tttggtcccttaacttattttttggtttcgttttgatcccttaactattaaaagtttcgttttggtccct 10286545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 2729 - 2810
Alignment:
Q  160 atttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccctcaaatatgctt 241  Q
    ||||| |||||||| ||||||||||||||| | ||  || | || ||| |||||||||| ||||||||||||||||||||||    
T  2729 atttgatcccttaaataatttttaggtttcattttggtctcctaattattaaaagttacgttttggtccctcaaatatgctt 2810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 41119854 - 41119787
Alignment:
Q  149 cttaattagatatttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagtt 216  Q
    |||||||| ||||||| |||| ||||||||||| | ||||| ||||  ||||||||||||||||||||    
T  41119854 cttaattacatatttgatcccctaattaattttcaagtttcatcttggtcccttatttaataaaagtt 41119787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 18905054 - 18904985
Alignment:
Q  161 tttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccct 230  Q
    ||||||||||||| | |||||| |||||||| || |||||||| ||| |||||||| | |||||||||||    
T  18905054 tttggtcccttaacttattttttggtttcgttttgatcccttaattattaaaagtttcgttttggtccct 18904985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 41118458 - 41118539
Alignment:
Q  149 cttaattagatatttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccct 230  Q
    |||||||  ||||| |||| | ||| ||||||| | ||||| ||||  |||||||||||||||||||||||||||| |||||    
T  41118458 cttaattgcatattaggtctcctaaataattttcaagtttcatcttggtcccttatttaataaaagttacattttgatccct 41118539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 286
Target Start/End: Original strand, 26134825 - 26134952
Alignment:
Q  158 atatttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccctcaaatatgcttccgtcagtcaatttca 257  Q
    |||||||||||||||||||||||  || ||| || ||  ||||||| |||||||||||| |||||| || ||| ||||||| ||  || || ||| ||      
T  26134825 atatttggtcccttaattaatttaaagattttgtttttgtcccttaattaataaaagtttcatttt-gttccttaaatatgattatgttagccaagttgg 26134923  T
Q  258 tccctctcttttaaatttaacctaaaatg 286  Q
    ||||||||| |||| |||||||| |||||    
T  26134924 tccctctctgttaattttaacctgaaatg 26134952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 26892478 - 26892547
Alignment:
Q  161 tttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccct 230  Q
    ||||||||||||| | |||||| |||||||| || ||||||||  || |||||||| | |||||||||||    
T  26892478 tttggtcccttaacttattttttggtttcgttttgatcccttaactattaaaagtttcgttttggtccct 26892547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 26897917 - 26897986
Alignment:
Q  161 tttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccct 230  Q
    ||||||||||||| | |||||| |||||||| || ||||||||  || |||||||| | |||||||||||    
T  26897917 tttggtcccttaacttattttttggtttcgttttgatcccttaactattaaaagtttcgttttggtccct 26897986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 18761 - 18692
Alignment:
Q  161 tttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccct 230  Q
    ||||||||||||| | |||||| |||||||| || ||||||||  || |||||||| | |||||||||||    
T  18761 tttggtcccttaacttattttttggtttcgttttgatcccttaactattaaaagtttcgttttggtccct 18692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 3318082 - 3318013
Alignment:
Q  161 tttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccct 230  Q
    ||||||||||||||| |||||| |||||||| ||  |||||||  || |||||||| | |||||||||||    
T  3318082 tttggtcccttaatttattttttggtttcgttttggtcccttaactattaaaagtttcgttttggtccct 3318013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 21524701 - 21524632
Alignment:
Q  161 tttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccct 230  Q
    ||||||||||||| | |||||| |||||||| ||  |||||||  || |||||||| |||||||||||||    
T  21524701 tttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttcattttggtccct 21524632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 1155978 - 1156047
Alignment:
Q  161 tttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccct 230  Q
    ||||||||||||| | |||||| |||||||| ||  |||||||  || |||||||| |||||||||||||    
T  1155978 tttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttcattttggtccct 1156047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 11846387 - 11846347
Alignment:
Q  149 cttaattagatatttggtcccttaattaatttttaggtttc 189  Q
    |||||||| |||||||||||||||||||||||  |||||||    
T  11846387 cttaattatatatttggtcccttaattaatttacaggtttc 11846347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 6098413 - 6098482
Alignment:
Q  161 tttggtcccttaattaatttttaggtttcgtcttaatcccttatttaataaaagttacattttggtccct 230  Q
    ||||||||||||||| |||||| |||||||| ||  ||||||   || |||||||| |||||||||||||    
T  6098413 tttggtcccttaatttattttttggtttcgttttggtccctttactattaaaagtttcattttggtccct 6098482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University