View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1803_high_15 (Length: 262)
Name: NF1803_high_15
Description: NF1803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1803_high_15 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 81 - 262
Target Start/End: Original strand, 41948640 - 41948821
Alignment:
| Q |
81 |
tgtgaattgatattggcatggaatttttatcccctcgatattacttgaacattcaaaagaaagttgattttcacacacccctnnnnnnnnttgttccagc |
180 |
Q |
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| T |
41948640 |
tgtgaattgatattggcatggaatttttatcccctcgatattacttgaacattcaaaagaaagttgattttcacacacccctaaaaaaaattgttccagc |
41948739 |
T |
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| Q |
181 |
aaaaactactttgtaaggaaaatgttaggtttaaaagtgcatagacagtcctacctacagctgtaataattccactgaataa |
262 |
Q |
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| T |
41948740 |
aaaaactactttgtaaggaaaatgttaggtttaaaagtacacagacagtcctacctacagctgtaataattccactgaataa |
41948821 |
T |
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