View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1803_low_8 (Length: 396)
Name: NF1803_low_8
Description: NF1803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1803_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 379; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 1 - 379
Target Start/End: Original strand, 30021958 - 30022336
Alignment:
| Q |
1 |
cttgttgttgacttcctctctttggtgtattgggatcactaaatgatttgttttcttgattcataaatttgcattggtaaattataaagaagctactatc |
100 |
Q |
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| T |
30021958 |
cttgttgttgacttcctctctttggtgtattgggatcactaaatgatttgttttcttgattcataaatttgcattggtaaattataaagaagctactatc |
30022057 |
T |
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| Q |
101 |
gatgcacacatcacacatgcaacgtgaagaaacaagtgcaaaggctatcaaaagatactagcattgtggtgactacttatgagggaattcacaaccaccc |
200 |
Q |
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| T |
30022058 |
gatgcacacatcacacatgcaacgtgaagaaacaagtgcaaaggctatcaaaagatactagcattgtggtgactacttatgagggaattcacaaccaccc |
30022157 |
T |
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| Q |
201 |
atgcgagaagctgatggaaactctaactcctcttctaaagcaaatacagtttcttgctagtttgtaattgtgaaattgtttttcttttatatacaaaaag |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30022158 |
atgcgagaagctgatggaaactctaactcctcttctaaagcaaatacagtttcttgctagtttgtaattgtgaaattgtttttcttttatatacaaaaag |
30022257 |
T |
|
| Q |
301 |
ctacctacatgtatgcacgtacatatcaagtattaactttatttatctttggctttctaatggttgatgttgtaattgt |
379 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30022258 |
ctacctacatgtatgcacgtacatatcaagtattaactttatttatctttggctttctaatggttgatgttgtaattgt |
30022336 |
T |
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