View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18040_low_20 (Length: 304)
Name: NF18040_low_20
Description: NF18040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18040_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 19 - 282
Target Start/End: Original strand, 44650375 - 44650637
Alignment:
| Q |
19 |
aattcacctataaattatacaatatggaaggcagagaaagagcaaattaatcaaacattgaattatggagtacacaaagtgagaattcgggttcgagaag |
118 |
Q |
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|||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44650375 |
aatttacctataaattataca-tatggaaggcagagaaagagcaaattaatcaaacattgaattatggagtacacaaagtgagaattcgggttcgagaag |
44650473 |
T |
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| Q |
119 |
aatattggttgaaatggaaccaacgtttcaccgctattcttgttataataatctggaggtacataatatggaaatggtgttcctggtggaaaatatgaat |
218 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44650474 |
aatattgcttgaaatggaaccaacgtttcaccgctattcttgttataataatctggaggtacataatatggaaatggtgttcctggtggaaaatatgaat |
44650573 |
T |
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| Q |
219 |
tttgtggtgggtatggagtcattggtggagattcacaattatttggacatggtgactttggagc |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44650574 |
tttgtggtgggtatggagtcattggtggagattcacaattatttggacatggtgactttggagc |
44650637 |
T |
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