View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18041_low_1 (Length: 543)

Name: NF18041_low_1
Description: NF18041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18041_low_1
NF18041_low_1
[»] chr7 (21 HSPs)
chr7 (3-519)||(42320777-42321284)
chr7 (1-149)||(14816658-14816807)
chr7 (1-149)||(15263654-15263803)
chr7 (1-150)||(25529110-25529260)
chr7 (1-149)||(46254849-46255001)
chr7 (1-137)||(35794462-35794599)
chr7 (1-149)||(43458170-43458318)
chr7 (1-149)||(33950914-33951066)
chr7 (1-126)||(34847903-34848029)
chr7 (1-149)||(36312084-36312235)
chr7 (27-137)||(1377359-1377470)
chr7 (1-84)||(44863000-44863083)
chr7 (4-137)||(1852136-1852270)
chr7 (1-84)||(31326691-31326774)
chr7 (1-82)||(3601045-3601126)
chr7 (4-81)||(1906602-1906679)
chr7 (1-81)||(26188245-26188325)
chr7 (1-117)||(19646929-19647046)
chr7 (1-56)||(10907013-10907068)
chr7 (31-84)||(7255450-7255503)
chr7 (31-84)||(26792016-26792069)
[»] chr1 (36 HSPs)
chr1 (1-179)||(50261967-50262146)
chr1 (4-179)||(41091154-41091330)
chr1 (1-179)||(38860660-38860839)
chr1 (4-179)||(41086386-41086562)
chr1 (1-179)||(11952396-11952575)
chr1 (1-179)||(12528429-12528608)
chr1 (1-183)||(49851692-49851875)
chr1 (4-178)||(23984015-23984187)
chr1 (1-158)||(41900284-41900442)
chr1 (1-126)||(41723512-41723637)
chr1 (1-150)||(37952284-37952434)
chr1 (1-149)||(42882595-42882744)
chr1 (1-179)||(27216782-27216960)
chr1 (1-149)||(44496469-44496618)
chr1 (1-149)||(52632365-52632514)
chr1 (1-149)||(29961381-29961530)
chr1 (1-149)||(12700541-12700693)
chr1 (1-104)||(44757581-44757685)
chr1 (1-126)||(14587368-14587497)
chr1 (1-150)||(33801347-33801500)
chr1 (1-149)||(3517580-3517729)
chr1 (1-84)||(30518209-30518292)
chr1 (2-84)||(34549839-34549921)
chr1 (1-71)||(48964984-48965054)
chr1 (1-61)||(22858741-22858801)
chr1 (96-150)||(48964932-48964986)
chr1 (4-72)||(41933555-41933623)
chr1 (31-84)||(22334963-22335016)
chr1 (14-81)||(41366790-41366857)
chr1 (31-84)||(3475324-3475377)
chr1 (1-84)||(12524966-12525048)
chr1 (31-84)||(18272291-18272344)
chr1 (31-84)||(18276945-18276998)
chr1 (1-117)||(29913811-29913928)
chr1 (31-84)||(29946826-29946879)
chr1 (31-84)||(39598234-39598287)
[»] chr5 (29 HSPs)
chr5 (1-179)||(37030236-37030415)
chr5 (1-179)||(9715287-9715466)
chr5 (1-179)||(26279018-26279197)
chr5 (1-179)||(25977110-25977285)
chr5 (1-149)||(27114288-27114437)
chr5 (1-173)||(37883408-37883581)
chr5 (1-149)||(37012808-37012957)
chr5 (1-149)||(18808965-18809117)
chr5 (1-149)||(8197392-8197544)
chr5 (1-177)||(11719915-11720093)
chr5 (1-149)||(8734678-8734826)
chr5 (1-147)||(12785138-12785288)
chr5 (1-139)||(3556605-3556744)
chr5 (1-147)||(12723655-12723805)
chr5 (1-126)||(13822100-13822226)
chr5 (1-126)||(16513620-16513746)
chr5 (1-126)||(38679480-38679606)
chr5 (1-79)||(15858802-15858880)
chr5 (1-67)||(2606076-2606142)
chr5 (2-116)||(27495146-27495261)
chr5 (4-84)||(32695017-32695098)
chr5 (4-84)||(23252461-23252541)
chr5 (1-68)||(8300857-8300924)
chr5 (58-126)||(8299250-8299319)
chr5 (1-80)||(22911851-22911930)
chr5 (4-75)||(27690513-27690584)
chr5 (31-84)||(5343800-5343853)
chr5 (32-81)||(32285511-32285560)
chr5 (4-56)||(27948579-27948631)
[»] chr4 (38 HSPs)
chr4 (3-179)||(4048119-4048296)
chr4 (1-179)||(4189849-4190028)
chr4 (1-179)||(38551245-38551424)
chr4 (1-173)||(2013714-2013887)
chr4 (1-179)||(168515-168694)
chr4 (1-178)||(6963438-6963616)
chr4 (1-179)||(16451914-16452093)
chr4 (1-167)||(45924582-45924749)
chr4 (1-179)||(15542816-15542994)
chr4 (1-179)||(35319871-35320050)
chr4 (1-149)||(31093090-31093239)
chr4 (1-149)||(33281070-33281219)
chr4 (1-150)||(16023857-16024007)
chr4 (4-179)||(28310865-28311042)
chr4 (1-149)||(35158703-35158852)
chr4 (1-149)||(40728010-40728159)
chr4 (1-150)||(1602768-1602917)
chr4 (1-149)||(28780780-28780929)
chr4 (1-150)||(30003595-30003747)
chr4 (1-149)||(49374302-49374450)
chr4 (1-149)||(52416935-52417087)
chr4 (1-149)||(51538629-51538778)
chr4 (1-149)||(45229054-45229203)
chr4 (1-149)||(45462235-45462384)
chr4 (1-149)||(55136649-55136801)
chr4 (1-126)||(38218293-38218419)
chr4 (1-149)||(43841879-43842031)
chr4 (1-150)||(9036101-9036253)
chr4 (37-149)||(56463651-56463767)
chr4 (1-82)||(39807350-39807431)
chr4 (1-84)||(40602725-40602808)
chr4 (1-82)||(20516650-20516734)
chr4 (7-72)||(49604488-49604553)
chr4 (4-84)||(56084099-56084179)
chr4 (7-117)||(34953601-34953712)
chr4 (27-75)||(9183338-9183386)
chr4 (31-84)||(13721373-13721426)
chr4 (31-84)||(16684303-16684356)
[»] chr3 (29 HSPs)
chr3 (1-183)||(32529783-32529966)
chr3 (1-183)||(39353281-39353464)
chr3 (4-179)||(41193692-41193868)
chr3 (1-175)||(49166089-49166263)
chr3 (1-150)||(149310-149460)
chr3 (1-149)||(47013720-47013869)
chr3 (1-179)||(6936451-6936629)
chr3 (1-149)||(227613-227762)
chr3 (1-149)||(47646900-47647052)
chr3 (1-150)||(36402711-36402864)
chr3 (1-147)||(40937201-40937348)
chr3 (1-179)||(31765178-31765356)
chr3 (1-149)||(10509223-10509375)
chr3 (1-126)||(26502219-26502345)
chr3 (1-117)||(41174793-41174910)
chr3 (1-149)||(39586557-39586706)
chr3 (1-84)||(33843500-33843583)
chr3 (1-84)||(53393929-53394012)
chr3 (1-84)||(42899201-42899284)
chr3 (4-84)||(51328999-51329079)
chr3 (4-84)||(25214605-25214685)
chr3 (7-57)||(27023911-27023961)
chr3 (1-72)||(10494800-10494871)
chr3 (1-117)||(45405668-45405785)
chr3 (1-56)||(12717635-12717690)
chr3 (31-84)||(9127054-9127107)
chr3 (31-84)||(9135161-9135214)
chr3 (31-84)||(48062203-48062256)
chr3 (31-84)||(49327374-49327427)
[»] chr2 (25 HSPs)
chr2 (1-178)||(13278677-13278855)
chr2 (1-179)||(31994052-31994231)
chr2 (1-179)||(7942717-7942896)
chr2 (1-179)||(1209905-1210085)
chr2 (1-149)||(6404099-6404248)
chr2 (1-149)||(15911759-15911911)
chr2 (1-149)||(17308941-17309092)
chr2 (1-149)||(44760076-44760225)
chr2 (1-149)||(17137707-17137863)
chr2 (1-149)||(18137572-18137721)
chr2 (1-150)||(38703588-38703740)
chr2 (1-147)||(45117054-45117208)
chr2 (1-149)||(30490682-30490834)
chr2 (1-84)||(38207468-38207551)
chr2 (1-117)||(21485295-21485412)
chr2 (4-84)||(33945914-33945994)
chr2 (32-114)||(1114722-1114805)
chr2 (1-84)||(37127963-37128046)
chr2 (114-179)||(1115196-1115261)
chr2 (14-84)||(21649751-21649821)
chr2 (1-84)||(24168500-24168583)
chr2 (4-117)||(18963339-18963453)
chr2 (1-93)||(34948476-34948567)
chr2 (1-117)||(15257143-15257260)
chr2 (1-84)||(16739468-16739548)
[»] chr8 (26 HSPs)
chr8 (1-179)||(32337794-32337973)
chr8 (1-181)||(43098518-43098699)
chr8 (1-179)||(23144082-23144262)
chr8 (1-179)||(6347279-6347458)
chr8 (1-179)||(37098317-37098496)
chr8 (1-149)||(39318600-39318749)
chr8 (1-179)||(627358-627537)
chr8 (1-179)||(31701022-31701198)
chr8 (1-179)||(586386-586565)
chr8 (1-150)||(40105253-40105403)
chr8 (1-149)||(35684020-35684169)
chr8 (1-149)||(8239992-8240141)
chr8 (27-179)||(20091870-20092023)
chr8 (1-150)||(11076212-11076362)
chr8 (1-150)||(39260293-39260446)
chr8 (1-117)||(32947063-32947180)
chr8 (16-81)||(28284449-28284514)
chr8 (14-84)||(11457022-11457092)
chr8 (1-55)||(42131968-42132022)
chr8 (1-84)||(4258771-4258854)
chr8 (104-179)||(13546234-13546309)
chr8 (104-179)||(13678164-13678239)
chr8 (1-40)||(13546304-13546343)
chr8 (1-40)||(13678130-13678169)
chr8 (31-84)||(24830776-24830829)
chr8 (4-69)||(32124533-32124598)
[»] chr6 (11 HSPs)
chr6 (1-179)||(31318518-31318697)
chr6 (1-150)||(303738-303891)
chr6 (1-149)||(31271333-31271482)
chr6 (1-149)||(31722873-31723025)
chr6 (1-149)||(16395299-16395451)
chr6 (1-150)||(439015-439168)
chr6 (1-149)||(9304958-9305107)
chr6 (1-117)||(20818516-20818633)
chr6 (1-105)||(17519837-17519942)
chr6 (14-79)||(28546870-28546934)
chr6 (4-72)||(6837282-6837350)
[»] scaffold1301 (1 HSPs)
scaffold1301 (1-149)||(1639-1788)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-109)||(19067-19176)
[»] scaffold0160 (1 HSPs)
scaffold0160 (1-84)||(17311-17394)
[»] scaffold0048 (1 HSPs)
scaffold0048 (1-84)||(51825-51906)
[»] scaffold0001 (1 HSPs)
scaffold0001 (17-75)||(427263-427321)
[»] scaffold0210 (1 HSPs)
scaffold0210 (1-80)||(8185-8264)


Alignment Details
Target: chr7 (Bit Score: 382; Significance: 0; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 3 - 519
Target Start/End: Complemental strand, 42321284 - 42320777
Alignment:
Q  3 gaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatacag 101  Q
    |||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||| || ||||||     
T  42321284 gaagaaaatggaagaaaagaggtgaagtgaagaatgaagatatttgttgaagatggaagcctatttataacctaaaacaagtcataggttattaataca- 42321186  T
Q  102 tcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaagttttgatgtggggtttgtgagg 201  Q
            |||||||| ||||| |||||| || ||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  42321185 --------aacgtgttagtgatcgtaaccgtctaaacctacattaatgct-ctctttcaaaagaatccaatgctgaagttttgatgtggggtttttgagg 42321095  T
Q  202 tgcggatgtgctgctattattgttggtctaatatatgcacatgctttgtattgcgagggtttggttttgaattgcagtagtatcgtgagaaggtctgaaa 301  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42321094 tgcggctgtgctgctattattgttggtctaatatatgcacatgctttgaattgcgagggtttggttttgaattgcagtagtatcgtgagaaggtctgaaa 42320995  T
Q  302 tccggaggaaagttggtgacatatggaacctccagtcgattacgatgataaaattgaatgacaattaaatgtgaagcgtgtaaatgctagagataatttc 401  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42320994 tccggaggaaagttggtgacatatggaacctccagtcgattacgataataaaattgaatgacaattaaatgtgaagcgtgtaaatgctagagataatttc 42320895  T
Q  402 tttatggtagacttgaatcattggatttgatttaataggaagtgggattgaaaaatgtaggtcgggtggaaggacatttgggcaatgacttgtcactgct 501  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42320894 tttatgggagacttgaatcattggattagatttaatatgaaggtggattgaaaaatgtaggtcgagtggaaggacatttgggcaatgacttgtcactgct 42320795  T
Q  502 tgtggcttttggagaaat 519  Q
    ||||||||||||||||||    
T  42320794 tgtggcttttggagaaat 42320777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 14816807 - 14816658
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||| |||||    
T  14816807 ttgaagaaaaaggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttataggctaaaacaagtcctaggtcattaatac 14816708  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||| ||| |||||||| |||||||| |||||||||    
T  14816707 agtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatg 14816658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 15263803 - 15263654
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||| |||||    
T  15263803 ttgaagaaaaaggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttataggctaaaacaagtcctaggtcattaatac 15263704  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||| ||| |||||||| |||||||| |||||||||    
T  15263703 agtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatg 15263654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 25529260 - 25529110
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||    
T  25529260 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatac 25529161  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatga 150  Q
    | |||||||| ||||||  ||| |||||||| |||||||| ||||||||||    
T  25529160 aatcaatgaatacgtgtcagtggttgtaaccgtccaaacccacattaatga 25529110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 46254849 - 46255001
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||    
T  46254849 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatac 46254948  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||   ||||  |||||||| |||||||| |||||||||    
T  46254949 agtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatg 46255001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 35794462 - 35794599
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  35794462 ttgaagaaaatgtaagaaaagagctgatgtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcataggtcattaatac 35794561  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaa 137  Q
    |||||||||||||||||| ||| |||||||| ||||||    
T  35794562 agtcaatgaaaacgtgttagtggttgtaaccgtccaaa 35794599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 43458170 - 43458318
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||  || ||||| |||||    
T  43458170 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagat-gtagcctatttatagcctaaaacaagtcctatgtcattaatac 43458268  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||| ||| |||||||| |||||||| |||||||||    
T  43458269 agtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatg 43458318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 33950914 - 33951066
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||||||||||||||| |||||||||||||||||| ||| | |||||||||||||||||||||  |||||||| |||||    
T  33950914 ttgaagaaaatgtaagaaaagaggtaaagtgaagaataaaggtatttgttgaagatagaaacttatttatagcctaaaacaagtcctaggtcattaatac 33951013  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||   ||||  ||||||||||||||||| |||||||||    
T  33951014 agtcaatgaaaacgtgttagtggttgttgtaaccatccaaacccacattaatg 33951066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 34848029 - 34847903
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||| |||||    
T  34848029 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgaaggtatctgttgaagatggaagcctatttatagcataaaacaagtcctaggtcattaatac 34847930  T
Q  100 agtcaatgaaaacgtgttggtgattgt 126  Q
    |||||||||||||||||| ||| ||||    
T  34847929 agtcaatgaaaacgtgttagtggttgt 34847903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 36312235 - 36312084
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaag-tataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| ||||||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||| | |||||||| |||||    
T  36312235 ttgaagaaaatgtaagaaaagaggtgaagtgaacaatgaagatatttgttgaagatggaagtcta-ttatagcctaaaacaagttctaggtcattaatac 36312137  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatg 149  Q
    ||||||| |||||||||   ||||  |||||||| |||||||| |||||||||    
T  36312136 agtcaataaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatg 36312084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 27 - 137
Target Start/End: Original strand, 1377359 - 1377470
Alignment:
Q  27 aagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatacagtcaatgaaaacgtgttggtgattg 125  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||| ||||| | ||||||||||||||||||||| ||| |      
T  1377359 aagtgaagaatgaagaaatttgttgaagatggaagcctatttatagcctaaaataagtcatatgtcataagtacagtcaatgaaaacgtgtttgtggtgc 1377458  T
Q  126 taaccatccaaa 137  Q
    ||||||||||||    
T  1377459 taaccatccaaa 1377470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 44863000 - 44863083
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||| ||||| ||||| |||||||||| ||||||||||    
T  44863000 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttcaagattgaagcatatttatagcttaaaacaagt 44863083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 1852136 - 1852270
Alignment:
Q  4 aagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagta--taggtcatgaatacag 101  Q
    ||||||| | |||||||||||| ||||||||||||||||  |||||| |||||| |||| ||| ||||||||||||||| ||  |||||||| | ||||     
T  1852136 aagaaaatgtaagaaaagaggtgaagtgaagaatgaaggactttgttcaagatgcaagcttatatatagcctaaaacaa-tacctaggtcataagtacaa 1852234  T
Q  102 tcaatgaaaacgtgttggtgattgtaaccatccaaa 137  Q
    |||||||||||||||| |||||  ||||||||||||    
T  1852235 tcaatgaaaacgtgtttgtgatgctaaccatccaaa 1852270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 31326774 - 31326691
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| |||||||||||| |||||||||||||||  |||||||||||||| || |||||||||||  ||||||||||    
T  31326774 ttgaagaaaaagtaagaaaagaggtgaagtgaagaatgaagaaatttgttgaagatgcaaacctatttatagtataaaacaagt 31326691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3601126 - 3601045
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaa 82  Q
    ||||||||| || |||||||||| | |||||||||| ||||  |||||||||||||| ||| ||||||||||||||||||||    
T  3601126 ttgaagaaatagtaagaaaagagttgaagtgaagaacgaagaaatttgttgaagatgcaagtctatttatagcctaaaacaa 3601045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 1906679 - 1906602
Alignment:
Q  4 aagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaaca 81  Q
    ||||||||| |||||||||||| |||||||||||| ||| | |||||||||||  |||||||||||||| || |||||    
T  1906679 aagaaaaagtaagaaaagaggtgaagtgaagaatgcaggaacttgttgaagattcaagcctatttatagtcttaaaca 1906602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26188325 - 26188245
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaaca 81  Q
    |||||||||| | ||| ||| |||| |||||||||||||||| |||||||||| ||| | ||||||||||| |||||||||    
T  26188325 ttgaagaaaatgaaagtaaaaaggtgaagtgaagaatgaaggaatttgttgaacatgcatgcctatttataacctaaaaca 26188245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 19646929 - 19647046
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    ||||| |||| | |||||||||||| |||| ||||||||||| | |||||||||||  |||| ||||||||| || |||| |||  ||| |||| | |||    
T  19646929 ttgaacaaaatgtaagaaaagaggtgaagtaaagaatgaaggaaattgttgaagattcaagcatatttatagtcttaaaccagtcctagatcataattac 19647028  T
Q  100 agtcaatgaaaacgtgtt 117  Q
    ||||||  ||||||||||    
T  19647029 agtcaagtaaaacgtgtt 19647046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10907013 - 10907068
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagat 56  Q
    |||||||||| | |||||| ||||| |||||||||||||||| | |||||||||||    
T  10907013 ttgaagaaaatgtaagaaaggaggtgaagtgaagaatgaaggaaattgttgaagat 10907068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 7255503 - 7255450
Alignment:
Q  31 gaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| |  ||||||||||  |||||| |||||||||||||||||||    
T  7255503 gaagaatgaaggaaaatgttgaagatccaagcctttttatagcctaaaacaagt 7255450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 26792016 - 26792069
Alignment:
Q  31 gaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| |  ||||||||||  |||||| |||||||||||||||||||    
T  26792016 gaagaatgaaggaaaatgttgaagatccaagcctttttatagcctaaaacaagt 26792069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 3e-68; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 50262146 - 50261967
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||    
T  50262146 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatac 50262047  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    |||||||||||||||||| ||| |||||||| | |||||| |||||||||| ||||||||||||||||||||||||||||    
T  50262046 agtcaatgaaaacgtgttagtggttgtaaccgttcaaacccacattaatgactctctttcaaaagaatccaatgttgaag 50261967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 41091154 - 41091330
Alignment:
Q  4 aagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatacagt 102  Q
    ||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||    
T  41091154 aagaaaatggaagaaaagaagtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagt 41091253  T
Q  103 caatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||  |||||||||||||||||||||| |||||    
T  41091254 caatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatggctctctttcaaaagaatccaatgctgaag 41091330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 38860660 - 38860839
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||| |||||    
T  38860660 ttgaagaaaacggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcatagatcattaatac 38860759  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    | |||||||||||||||| ||| | |||||| |||||||| |||||||||  ||||||||||||||||||||||||||||    
T  38860760 attcaatgaaaacgtgttagtggtagtaaccgtccaaacccacattaatggctctctttcaaaagaatccaatgttgaag 38860839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 41086386 - 41086562
Alignment:
Q  4 aagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatacagt 102  Q
    ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||| ||||||||    
T  41086386 aagaaaatggaagaaaagaagtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagtctaaaacaagtcctaggtcattaatacagt 41086485  T
Q  103 caatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||  |||||||||||||||||||||| |||||    
T  41086486 caatgaaaacgtgttagtggttgtaaccttccaaacccacattaatggctctctttcaaaagaatccaatgctgaag 41086562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 11952575 - 11952396
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |  ||||| |||||    
T  11952575 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaataagtcttttgtcattaatac 11952476  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    |||||||||||||||||| ||| |||||||| |||||||  |||||||||  |||||||||||||||||||||| |||||    
T  11952475 agtcaatgaaaacgtgttagtggttgtaaccgtccaaactcacattaatggctctctttcaaaagaatccaatgctgaag 11952396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 12528429 - 12528608
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||    
T  12528429 ttgaagaaaatggaagaaaataggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatac 12528528  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    |||||||||||||||||||||| |||||||| || |||   | |||||||| ||||||||||||||| |||||| |||||    
T  12528529 agtcaatgaaaacgtgttggtggttgtaaccgtcgaaattcatattaatgactctctttcaaaagaaaccaatgctgaag 12528608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 49851692 - 49851875
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||| | |||    
T  49851692 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcctaggtcattagtac 49851791  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaagtttt 183  Q
    ||||||||||||| |||| ||| |||||||| |||||||||||||| |||  ||||||||||||||||| ||||  ||||||||    
T  49851792 agtcaatgaaaacatgttagtggttgtaaccgtccaaacctacattgatggctctctttcaaaagaatcaaatgccgaagtttt 49851875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 4 - 178
Target Start/End: Complemental strand, 23984187 - 23984015
Alignment:
Q  4 aagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatacagt 102  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||   ||||||    
T  23984187 aagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaaacctatttatagcctaaaacaagtcctaggtcat---tacagt 23984091  T
Q  103 caatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaa 178  Q
    |||||||||| |||| ||| |||||||| ||||||||  ||||||||| |||||||||||||||||||||||||||    
T  23984090 caatgaaaacatgttagtggttgtaaccgtccaaaccctcattaatgactctctttcaaaagaatccaatgttgaa 23984015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 41900442 - 41900284
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  41900442 ttgaagaaaatggaagaaaagaggtaaggtgaagaatgaaggtatttattgaagatggaagcctatttatagcctaaaacaagtcataggtcattaatac 41900343  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctcttt 158  Q
    |||||||||||| ||||| ||| |||||||| |||||||| |||||||||  |||||||    
T  41900342 agtcaatgaaaatgtgttagtggttgtaaccgtccaaacccacattaatggctctcttt 41900284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 41723512 - 41723637
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtataggtcatgaataca 100  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| |    
T  41723512 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtctaggtcattaatata 41723611  T
Q  101 gtcaatgaaaacgtgttggtgattgt 126  Q
    ||||||||||||||||||||| ||||    
T  41723612 gtcaatgaaaacgtgttggtggttgt 41723637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 37952284 - 37952434
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    ||||||||||   |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||| |||||    
T  37952284 ttgaagaaaatataagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctttttatagcctaaaacaagtcctaggtcattaatac 37952383  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatga 150  Q
    |||||||||||||||||| ||| |||||||  |||||||| ||||||||||    
T  37952384 agtcaatgaaaacgtgttagtggttgtaacggtccaaacccacattaatga 37952434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 42882744 - 42882595
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||    
T  42882744 ttgaagaaaatgtaagaaaagaggtgatgtgaagaatgaagatatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatac 42882645  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||| ||||| ||| ||||||||||||||||| ||| |||||    
T  42882644 agtcaatgaaaatgtgttagtggttgtaaccatccaaacccacaataatg 42882595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 27216782 - 27216960
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| |||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||  |||||||| | |||    
T  27216782 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaagtattttttgaagatgaaagcctatttatagcctaaaacaagtcctaggtcattagtac 27216881  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    | |||||||||||||||| ||| |||||||| ||||||| ||||||||||| || |   ||||||||||||||| |||||    
T  27216882 aatcaatgaaaacgtgttagtggttgtaaccgtccaaacatacattaatgactc-cacacaaaagaatccaatgctgaag 27216960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 44496469 - 44496618
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| ||||||||| ||||  ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||  || ||||| |||||    
T  44496469 ttgaagaaaatggaagaaaataggtggagtgaagaatgaaagtatttgttgaagatgaaagcctatttatagcctaaaacaagtcctatgtcattaatac 44496568  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||| ||| |||||||| |||||||| |||||||||    
T  44496569 agtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatg 44496618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 52632514 - 52632365
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    ||||| |||| ||| |||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  |||||||| |||||    
T  52632514 ttgaataaaatggaggaaaagaggtgaagtgaagaatgaagacatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatac 52632415  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    | |||||||||||||||| ||| |||||||| || ||||| |||||||||    
T  52632414 aatcaatgaaaacgtgttagtggttgtaaccgtctaaacccacattaatg 52632365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 29961381 - 29961530
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | ||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||  || ||||| |||||    
T  29961381 ttgaagaaaatgtaagaaaagatgtgaagtgaagaatgaaggtatttgttgaagatggaagtctatttatagcctaaaataagtcttaagtcattaatac 29961480  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    | |||||||||||||||| ||| |||||||| | |||||| |||||||||    
T  29961481 aatcaatgaaaacgtgttagtggttgtaaccgttcaaacccacattaatg 29961530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 12700693 - 12700541
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||| |||| |||||    
T  12700693 ttgaagaaaatgtaagaaaagaggtcaagtgaagaatgaagatatttgttgaagatggaagcctatttatagcctaaaacaagtcctagatcattaatac 12700594  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||| ||||   ||||| |||||||  |||||||  |||||||||    
T  12700593 agtcaatgaaaatgtgttagtggtggttgtaactgtccaaacgcacattaatg 12700541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 44757685 - 44757581
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||    
T  44757685 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatac 44757586  T
Q  100 agtca 104  Q
    |||||    
T  44757585 agtca 44757581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 14587497 - 14587368
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaa---gcctatttatagcctaaaacaagt-ataggtcatgaa 96  Q
    |||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||  || ||||| ||    
T  14587497 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagccgcctatttatagcctaaaacaagtcctaagtcattaa 14587398  T
Q  97 tacagtcaatgaaaacgtgttggtgattgt 126  Q
    ||||||||||||||||||||| ||| ||||    
T  14587397 tacagtcaatgaaaacgtgttagtggttgt 14587368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 33801347 - 33801500
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||  || ||||| | |||    
T  33801347 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgtaggtattttttgaagatggaagcctatttatagcctaaaacaagtcctaagtcattattac 33801446  T
Q  100 agtcaatgaaaacgtgttggtgat---tgtaaccatccaaacctacattaatga 150  Q
    |||||||||||||||||| ||| |   ||||| | |||||||| ||||||||||    
T  33801447 agtcaatgaaaacgtgttagtggttgctgtaatcgtccaaacccacattaatga 33801500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 3517729 - 3517580
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||| |  ||||||||   |||    
T  3517729 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagataaaagtctatttatagcctaaaacaactcctaggtcat---tac 3517633  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||   ||||  |||||||| |||||||| |||||||||    
T  3517632 agtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatg 3517580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 30518292 - 30518209
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||| | |||||||||| | |||||||||||||||  |||| ||||| ||| ||||||||||||||||||||||||||    
T  30518292 ttgaagaaaatgaaagaaaagagattaagtgaagaatgaagaaattttttgaacatgcaagcctatttatagcctaaaacaagt 30518209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 34549839 - 34549921
Alignment:
Q  2 tgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    ||||| ||||| ||||||| |||| | |||||||||||||| |||||||||| ||| || |||||||||||||||||||||||    
T  34549839 tgaagtaaaagtaagaaaacaggtgacgtgaagaatgaaggaatttgttgaatatgcaaacctatttatagcctaaaacaagt 34549921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 48965054 - 48964984
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttata 71  Q
    |||||||||| | |||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||||    
T  48965054 ttgaagaaaatgtaagaaaagaggtgatatgaagaatgaacgtatttgttgaagatggaagcctatttata 48964984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22858741 - 22858801
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaag 61  Q
    |||||||||| | |||||||||||| | |||||||||||||||||||||||||||||||||    
T  22858741 ttgaagaaaatgtaagaaaagaggtgatgtgaagaatgaaggtatttgttgaagatggaag 22858801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 48964986 - 48964932
Alignment:
Q  96 atacagtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatga 150  Q
    |||||||||||||||||||||| |||||| ||||| |||||||| ||||||||||    
T  48964986 atacagtcaatgaaaacgtgttagtgattctaaccgtccaaacccacattaatga 48964932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 41933623 - 41933555
Alignment:
Q  4 aagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatag 72  Q
    ||||||||| ||||||||| | ||||||||||||||| | | || ||||||||| ||||||||||||||    
T  41933623 aagaaaaagtaagaaaagatggaaagtgaagaatgaatggaatttttgaagatgcaagcctatttatag 41933555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 22335016 - 22334963
Alignment:
Q  31 gaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| |  |||||||||| ||||||| |||||||||||||||||||    
T  22335016 gaagaatgaaggaaaatgttgaagatcgaagcctttttatagcctaaaacaagt 22334963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 41366790 - 41366857
Alignment:
Q  14 aagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaaca 81  Q
    |||| ||||||| |||||| |||||||||   |||||||| ||| || ||||||||||||||||||||    
T  41366790 aagagaagaggtgaagtgacgaatgaaggagattgttgaatatgcaaacctatttatagcctaaaaca 41366857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 3475377 - 3475324
Alignment:
Q  31 gaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| |  ||||||||||  |||||| |||||||||||||||||||    
T  3475377 gaagaatgaaggaaaatgttgaagatccaagcctttttatagcctaaaacaagt 3475324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 12525048 - 12524966
Alignment:
Q  1 ttgaagaaaaaggaagaaaaga-ggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||| | ||||||||| ||| ||  |||||||||||| |  ||||||||||  |||||| |||||||||||||||||||    
T  12525048 ttgaagaaaatgtaagaaaagagggtgaa--gaagaatgaaggaaaatgttgaagatccaagcctttttatagcctaaaacaagt 12524966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 18272291 - 18272344
Alignment:
Q  31 gaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| |  ||||||||||  |||||| |||||||||||||||||||    
T  18272291 gaagaatgaaggaaaatgttgaagatccaagcctttttatagcctaaaacaagt 18272344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 18276945 - 18276998
Alignment:
Q  31 gaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| |  ||||||||||  |||||| |||||||||||||||||||    
T  18276945 gaagaatgaaggaaaatgttgaagatccaagcctttttatagcctaaaacaagt 18276998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 29913811 - 29913928
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | ||| ||||||||  | ||||||||||||  | |||| ||||||  |||| |||||||| || |||||||||  ||||| || | |||    
T  29913811 ttgaagaaaatgtaagtaaagaggtgtaatgaagaatgaagaaaattgtagaagattcaagcttatttataacccaaaacaagtcctaggttataagtac 29913910  T
Q  100 agtcaatgaaaacgtgtt 117  Q
    || |||||||||||||||    
T  29913911 agacaatgaaaacgtgtt 29913928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 29946879 - 29946826
Alignment:
Q  31 gaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| |  ||||||||||  |||||| |||||||||||||||||||    
T  29946879 gaagaatgaaggaaaatgttgaagatccaagcctttttatagcctaaaacaagt 29946826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 39598234 - 39598287
Alignment:
Q  31 gaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| |  ||||||||||  |||||| |||||||||||||||||||    
T  39598234 gaagaatgaaggaaaatgttgaagatccaagcctttttatagcctaaaacaagt 39598287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 6e-66; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 37030415 - 37030236
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| |||||    
T  37030415 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagtctatttatagcctaaaacaagtcctaggtcattaatac 37030316  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||||||||  |||||||||||||||||||||| |||||    
T  37030315 agtcaatgaaaacgtgttagtggttgtaaccatccaaacccacattaatggctctctttcaaaagaatccaatgctgaag 37030236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 9715466 - 9715287
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||| ||||||||| | | |    
T  9715466 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaagctatttgttgaagatggaagtctatttatagcctaaaaaaagtcataggtcattagtgc 9715367  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  9715366 agtcaatgaaaacgtgttggtggttgtaaccgtccaaacctacatcaatgactctctttcaaaagaatccaatgttgaag 9715287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 26279018 - 26279197
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||| | |||    
T  26279018 ttgaagaaaatggaagaaaagaagtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctgggtcattagtac 26279117  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||    
T  26279118 agtcaatgaaaacgtgttagtggttgtaaccgtccaaacctacattaatgactctctttcaagagaatccaatgttgaag 26279197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 25977285 - 25977110
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagta-taggtcatgaatac 99  Q
    |||||||||| |||||||||||||| |||||||||||||||||    |||||||||||||||||||||||| ||||||||||||  || ||||| | |||    
T  25977285 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggt----gttgaagatggaagcctatttataacctaaaacaagtcctaagtcattactac 25977190  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    |||||||||||||||||| ||| |||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25977189 agtcaatgaaaacgtgttagtggttgtaatcgtccaaacctacattaatgactctctttcaaaagaatccaatgttgaag 25977110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 27114288 - 27114437
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  || ||||| |||||    
T  27114288 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaagatatttgttgaagatggaagcctatttatagcctaaaacaagtcctatgtcattaatac 27114387  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||||||| |||||||| |||||||| |||||||||    
T  27114388 agtcaatgaaaacgtgttggtggttgtaaccgtccaaacccacattaatg 27114437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 37883408 - 37883581
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||| | ||     
T  37883408 ttgaagaaaatggaagaaaagatgtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcttaaaacaagtcttaggtcattactat 37883507  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatg 173  Q
    ||||||||||||| |||| ||| |||||||| |||||||| |||||||||  ||||||||||||||||||||||    
T  37883508 agtcaatgaaaacatgttagtggttgtaaccgtccaaacccacattaatggctctctttcaaaagaatccaatg 37883581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 37012808 - 37012957
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaag-tataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||  ||||    
T  37012808 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaagtatttgttgaagatggaagcctatttatagcctaaaacaagttctaggtcattcatac 37012907  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||| ||| |||||||| |||||||| |||||||||    
T  37012908 agtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatg 37012957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 18808965 - 18809117
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  18808965 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagactatttatagcctaaaacaagtcataggtcattaatac 18809064  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||   ||||  |||||||| ||||||||||||||||||    
T  18809065 agtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacctacattaatg 18809117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 8197392 - 8197544
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||| |||||    
T  8197392 ttgaagaaaatgtaagaaaataggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagtctaaaacaagtcctaggtcattaatac 8197491  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||   ||||  |||||||| |||||||| |||||||||    
T  8197492 agtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatg 8197544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 11720093 - 11719915
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaa-gaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagta-taggtcatgaata 98  Q
    |||||||||| | |||||||||||| ||||||| |||||||||||||||||||||||| ||| |||||||| |||||||| ||||  |||||||| | ||    
T  11720093 ttgaagaaaatgaaagaaaagaggtgaagtgaaagaatgaaggtatttgttgaagatgaaagtctatttatggcctaaaataagtcctaggtcattagta 11719994  T
Q  99 cagtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttga 177  Q
    ||||||||||||||||||| ||| | |||||| | ||||||||||||||||  |||||||||||||||| |||||||||    
T  11719993 cagtcaatgaaaacgtgttagtggtcgtaaccgttcaaacctacattaatggctctctttcaaaagaattcaatgttga 11719915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 8734678 - 8734826
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagta-taggtcatgaatac 99  Q
    |||||||||| | |||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||  |||||||| |||||    
T  8734678 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgaaggtatttgttca-gatggaagcctatttatagcctaaaacaagtcctaggtcattaatac 8734776  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||| ||| |||||| | |||||||| |||||||||    
T  8734777 agtcaatgaaaacgtgttagtggttgtaatcgtccaaacccacattaatg 8734826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 12785138 - 12785288
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||| |||||    
T  12785138 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagattgaagcctatttatagcctaaaacaagtcctaggtcattaatac 12785237  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaa 147  Q
    |||||||||||||||||   ||||  |||||||| |||||||| |||||||    
T  12785238 agtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaa 12785288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 3556605 - 3556744
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||  |||||||| |||||    
T  3556605 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggaatttgttaaagatggaagcatatttatagcctaaaacaagtcctaggtcattaatac 3556704  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacc 139  Q
    |||||||||||||||||| ||| |||||| | ||||||||    
T  3556705 agtcaatgaaaacgtgttagtgcttgtaatcgtccaaacc 3556744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 12723655 - 12723805
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||  |||||||| |||||    
T  12723655 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatgaaaacctatttatagcctaaaacaagtcctaggtcattaatac 12723754  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaa 147  Q
    |||||||||||||||||   ||||  |||||||| |||||||| |||||||    
T  12723755 agtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaa 12723805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 13822226 - 13822100
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||| |||||    
T  13822226 ttgaagaaaatgtaagaaaagaggtgaggtgaagaatgaaggtatttgttgaagatggaaacctatttatagcctaaaacaagtcatagatcattaatac 13822127  T
Q  100 agtcaatgaaaacgtgttggtgattgt 126  Q
    |||||||||||||||||| ||| ||||    
T  13822126 agtcaatgaaaacgtgttagtggttgt 13822100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 16513746 - 16513620
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||  |||||||||| ||||||||| |||||    
T  16513746 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaaaattgaagcctatttatagtttaaaacaagtcataggtcattaatac 16513647  T
Q  100 agtcaatgaaaacgtgttggtgattgt 126  Q
    |||| ||||||||||||| ||| ||||    
T  16513646 agtcgatgaaaacgtgttagtggttgt 16513620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 38679606 - 38679480
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| |||||||||||| || |||||||||||||| |||||||||||||||||||||||||||  || ||||| |||||    
T  38679606 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgtagatatttgttgaagattgaagcctatttatagcctaaaacaagtcctaagtcattaatac 38679507  T
Q  100 agtcaatgaaaacgtgttggtgattgt 126  Q
    |||||||| ||| ||||| ||| ||||    
T  38679506 agtcaatgcaaaagtgttagtggttgt 38679480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 15858802 - 15858880
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaa 79  Q
    |||||||||| | |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15858802 ttgaagaaaatgtaagaaaagaggtgatgtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaa 15858880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 2606142 - 2606076
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatt 67  Q
    |||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  2606142 ttgaagaaaatggaagaaaagatgtgaagtgaagaatgaaggtatttgttgaagatggaagcctatt 2606076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 27495146 - 27495261
Alignment:
Q  2 tgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaataca 100  Q
    ||||||||| | |||||||||||| |||||||||||||||  | |||||||||||| ||| ||||||||||||| |||| ||| |||||| || | ||||    
T  27495146 tgaagaaaatgtaagaaaagaggtgaagtgaagaatgaagaaaattgttgaagatgaaagtctatttatagccttaaaccagtcataggtaataattaca 27495245  T
Q  101 gtcaatgaaaacgtgt 116  Q
    |||||  |||||||||    
T  27495246 gtcaactaaaacgtgt 27495261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 32695017 - 32695098
Alignment:
Q  4 aagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatg-gaagcctatttatagcctaaaacaagt 84  Q
    ||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||  ||||||||||||| ||| ||||||||    
T  32695017 aagaaaaagtaagaaaagaggtgaagtgaaaaatgaaggaatttgttgaagatgcaaagcctatttataaccttaaacaagt 32695098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 23252461 - 23252541
Alignment:
Q  4 aagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    ||||||| | ||||||||||||||||||||||||||||| ||||||| |||||| |||  ||||||||| |||||| ||||    
T  23252461 aagaaaacgtaagaaaagaggtaaagtgaagaatgaaggaatttgtttaagatgcaagtttatttatagtctaaaataagt 23252541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8300924 - 8300857
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctattt 68  Q
    |||||||||| | ||||||||| || |||||||||||| |||||||||||||||||||||| ||||||    
T  8300924 ttgaagaaaatgtaagaaaagatgtgaagtgaagaatgtaggtatttgttgaagatggaagtctattt 8300857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 58 - 126
Target Start/End: Complemental strand, 8299319 - 8299250
Alignment:
Q  58 gaagcctatttatagcctaaaacaagtat-aggtcatgaatacagtcaatgaaaacgtgttggtgattgt 126  Q
    |||| |||||||||||||||||||| | | ||||||| |||||||||||| |||||||||||||| ||||    
T  8299319 gaagtctatttatagcctaaaacaattcttaggtcattaatacagtcaataaaaacgtgttggtggttgt 8299250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 22911930 - 22911851
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaac 80  Q
    |||||||||| | ||||||||| ||   |||||||||||||| ||||| ||||||||||| |||||| ||||||| ||||    
T  22911930 ttgaagaaaatgtaagaaaagaagtgtggtgaagaatgaaggaatttgatgaagatggaaacctattgatagccttaaac 22911851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 27690584 - 27690513
Alignment:
Q  4 aagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcct 75  Q
    ||||||| | ||||||||| |  |||||||||||||| | | |||||||||||| |||| ||||||||||||    
T  27690584 aagaaaatgtaagaaaagatgggaagtgaagaatgaatgaaattgttgaagatgcaagcatatttatagcct 27690513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 5343853 - 5343800
Alignment:
Q  31 gaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| |  ||||||||||  |||||| |||||||||||||||||||    
T  5343853 gaagaatgaaggaaaatgttgaagatccaagcctttttatagcctaaaacaagt 5343800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 32285511 - 32285560
Alignment:
Q  32 aagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaaca 81  Q
    ||||||||||  |||||||||||||| ||| ||||||||||||| |||||    
T  32285511 aagaatgaagaaatttgttgaagatgcaagtctatttatagccttaaaca 32285560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 27948579 - 27948631
Alignment:
Q  4 aagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagat 56  Q
    ||||||| | |||||| ||||| |||||||||||||||| | |||||||||||    
T  27948579 aagaaaatgtaagaaaggaggtgaagtgaagaatgaaggaaattgttgaagat 27948631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 1e-64; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 3 - 179
Target Start/End: Original strand, 4048119 - 4048296
Alignment:
Q  3 gaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatacag 101  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| || ||||||     
T  4048119 gaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggttattaatacaa 4048218  T
Q  102 tcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    |||||||||||||||| ||| |||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||    
T  4048219 tcaatgaaaacgtgttagtggttgtaaccgtccaaacctacattaatgactctctttcaaaataatccaatgttgaag 4048296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 4190028 - 4189849
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||     
T  4190028 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatat 4189929  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    ||||||| |||||||||| ||| |||||||| |||||||| |||||||||| |||||||||||||||||||||| |||||    
T  4189928 agtcaataaaaacgtgttagtggttgtaaccgtccaaacccacattaatgactctctttcaaaagaatccaatgctgaag 4189849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 38551424 - 38551245
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| | |||    
T  38551424 ttgaagaaaatggaagaaaagatgtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattagtac 38551325  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||||||||  |||||||||||||||||||||| |||||    
T  38551324 agtcaatgaaaacgtgttagtggttgtaaccgtccaaacctacattaatggctctctttcaaaagaatccaatgctgaag 38551245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 2013887 - 2013714
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||| |||||    
T  2013887 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagccaatttatagcctaaaacaagtcctaggtcattaatac 2013788  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatg 173  Q
    |||||||||||||||||| ||| |||||||| |||||| | |||||||||| ||||||||||||||||||||||    
T  2013787 agtcaatgaaaacgtgttagtggttgtaaccgtccaaatccacattaatgactctctttcaaaagaatccaatg 2013714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 168694 - 168515
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| |||||    
T  168694 ttgaagaaaagggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaaggctatttatagtctaaaacaagtcataggtcattaatac 168595  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    |||||||||||||||||| ||| |||||| | |||||||| |||||| ||  ||||||||||||||||||||||||||||    
T  168594 agtcaatgaaaacgtgttagtggttgtaaacgtccaaacccacattagtggctctctttcaaaagaatccaatgttgaag 168515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 6963438 - 6963616
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||| | ||     
T  6963438 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaataagtcctaggtcattactat 6963537  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaa 178  Q
    |||||||||||| ||||| |||||||||||| |||||||| |||||||||  |||||||||||||||||||||| ||||    
T  6963538 agtcaatgaaaatgtgttagtgattgtaaccgtccaaacccacattaatggctctctttcaaaagaatccaatgctgaa 6963616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 16451914 - 16452093
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    ||||||||||  ||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||  ||| |||| | |||    
T  16451914 ttgaagaaaattgaagaaaagaggtgaagtgaagaatgaaggtatctgctgaagatggaagcctatttatagcctaaaacaagtcctagatcattactac 16452013  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    |||||||||||||||||| ||| |||||||| | ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  16452014 agtcaatgaaaacgtgttagtggttgtaaccgttcaaacatacattaatgactctctttcaaaagaatccaatgttgaag 16452093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 45924582 - 45924749
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||| |||||    
T  45924582 ttgaagaaaatggaagaaaagaggttaagtgaggaatgaaggtatttgttgaagattgaaacctatttatagcctaaaacaagtcataggtcattaatac 45924681  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaat 167  Q
    |||||||||||||||||| ||| ||| |||| |||||||| |||||||||  ||||||||||||||||    
T  45924682 agtcaatgaaaacgtgttagtggttgcaaccgtccaaacccacattaatggctctctttcaaaagaat 45924749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 15542994 - 15542816
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| | ||     
T  15542994 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattactat 15542895  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    |||||||||||||||||| ||| || ||||| |||||||| ||||||||   ||||||| |||||||||||||| |||||    
T  15542894 agtcaatgaaaacgtgttagtg-ttttaaccgtccaaacccacattaattgctctcttttaaaagaatccaatgctgaag 15542816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 35320050 - 35319871
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||| | ||     
T  35320050 ttgaagaaaatggaagaaaagaggtgaagtggagaatgaaagtatttgttgaagatggaagcctatttatagcttaaaacaagtcataggtcattactat 35319951  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    ||| |||||||||||||| ||  |||||||| |||||||  |||||||||| |||||||||||||||||||||| |||||    
T  35319950 agttaatgaaaacgtgttagtagttgtaaccgtccaaactcacattaatgactctctttcaaaagaatccaatgctgaag 35319871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 31093090 - 31093239
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  31093090 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcataggtcattaatac 31093189  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    ||||||||| | |||||| ||| |||||||| |||||||| ||| |||||    
T  31093190 agtcaatgagatcgtgttagtggttgtaaccgtccaaacccacaataatg 31093239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 33281070 - 33281219
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||| |||||    
T  33281070 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatgtaagcctatttatagcctaaaacaagtcttaggtcattaatac 33281169  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    | |||||||||||||||| ||| |||||||| |||||||| |||||||||    
T  33281170 aatcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatg 33281219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 16023857 - 16024007
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| || |||||    
T  16023857 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgaaggtatttgttgaatatggaagcctatttatagcctaaaacaagtcataggttattaatac 16023956  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatga 150  Q
    |||||||||||||||||| ||| ||| |||| |||||||| ||||||||||    
T  16023957 agtcaatgaaaacgtgttagtggttgcaaccgtccaaacccacattaatga 16024007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 28311042 - 28310865
Alignment:
Q  4 aagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaa-gtat-aggtcatgaatacag 101  Q
    ||||||| |||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||  |||||||| || | ||||||| ||||| |    
T  28311042 aagaaaatggaataaaagaggtgaaatgaagaatgaaggtatttgttgaagatggaagcctatttatagtataaaacaaagtcttaggtcattaatacgg 28310943  T
Q  102 tcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    |||||||||||||||| ||| |||||||| | |||||| |||||||||| |||||||||||||||||||||| |||||    
T  28310942 tcaatgaaaacgtgttagtggttgtaaccgttcaaacccacattaatgactctctttcaaaagaatccaatgctgaag 28310865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 35158703 - 35158852
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||    
T  35158703 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatac 35158802  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    ||| |||||||||||||| ||| || ||||| |||||||| ||| |||||    
T  35158803 agtaaatgaaaacgtgttagtggttctaaccgtccaaacccacaataatg 35158852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 40728010 - 40728159
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||| |||||    
T  40728010 ttgaagaaaatgtaagaaaagaggtgatgtgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcctaggtcattaatac 40728109  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||| ||| ||||||||||||| ||| |||||||||    
T  40728110 agtcaatgaaaacgtgttagtggttgtaaccatccatacccacattaatg 40728159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 1602768 - 1602917
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||| |||||    
T  1602768 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcctaggtcattaatac 1602867  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatga 150  Q
    ||||||| |||||||||| ||| |||||||| |||||| | ||||||||||    
T  1602868 agtcaat-aaaacgtgttagtggttgtaaccgtccaaatccacattaatga 1602917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 28780929 - 28780780
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||    
T  28780929 ttgaagaaaatgtaagaaaagaggtgatgtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcatatgtcattaatac 28780830  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||| ||| ||||||||  ||||| | |||||||||    
T  28780829 agtcaatgaaaacgtgttagtggttgtaaccgcccaaaaccacattaatg 28780780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 30003595 - 30003747
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagccta--aaacaagt-ataggtcatgaat 97  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||  |||||||| |||    
T  30003595 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaataaacaagtcctaggtcattaat 30003694  T
Q  98 acagtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatga 150  Q
    ||||||||||||||||||||  || |||||||| |||||||| ||| ||||||    
T  30003695 acagtcaatgaaaacgtgttattgcttgtaaccgtccaaacccacaataatga 30003747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 49374302 - 49374450
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||  ||||    
T  49374302 ttgaagaaaatggaagaaaagaggtgaagtgaagaatggaggtttttgttgaagatggaagcctatttatagcctaaaacaagtcataggtcat-tatac 49374400  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||| ||| |||||||  |||||||| |||||||||    
T  49374401 agtcaatgaaaacgtgttagtggttgtaactgtccaaacccacattaatg 49374450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 52417087 - 52416935
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||    
T  52417087 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgagggtatttgttgaagatggaagcctatttatagcctaaaacaagtcttaggtcattaatac 52416988  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||   ||||  |||||||| |||||||| |||||||||    
T  52416987 agtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatg 52416935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 51538629 - 51538778
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    ||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  || ||||| |||||    
T  51538629 ttgaaaaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcatatttatagcctaaaacaagtcctaagtcattaatac 51538728  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    ||||||||||||| |||||||| ||| |||  |||||||| |||||||||    
T  51538729 agtcaatgaaaacatgttggtggttgcaactgtccaaacccacattaatg 51538778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 45229054 - 45229203
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| | ||||||||||||  |||||||||||||||||| |||||||||||||||||||||||  |||||||| |||||    
T  45229054 ttgaagaaaatgtaagaaaagaggtgatgtgaagaatgaatatatttgttgaagatggaatcctatttatagcctaaaacaagtcctaggtcattaatac 45229153  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    |||| ||||||||||||| ||| |||||||| |||||||| |||||||||    
T  45229154 agtccatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatg 45229203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 45462235 - 45462384
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| ||||||||| |||| ||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||| |||| |||| |||||    
T  45462235 ttgaagaaaatggaagaaaataggtgaagtgaagaatgaagatatttgttgaagatgaaagtctatttatagcctaaaacaagtcatagatcattaatac 45462334  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||  ||| |||||||| |||||||| ||| |||||    
T  45462335 agtcaatgaaaacgtgtcagtggttgtaaccgtccaaacccacaataatg 45462384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 55136649 - 55136801
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||| ||||| | |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||    
T  55136649 ttgacgaaaatgtaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcataggtcattaatac 55136748  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatg 149  Q
    | ||||||| |||||||   ||||  |||||||| |||||||| |||||||||    
T  55136749 aatcaatgataacgtgttagtggttgttgtaaccgtccaaacccacattaatg 55136801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 38218419 - 38218293
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaag-tataggtcatgaatac 99  Q
    |||||||||| | || ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| | |||||||| |||||    
T  38218419 ttgaagaaaatgtaaaaaaagaggtgaagtgaagaatgtaggtatttgttgaagatggaagcctatttataggctaaaacaagttctaggtcattaatac 38218320  T
Q  100 agtcaatgaaaacgtgttggtgattgt 126  Q
    |||||||||||||||||| ||| ||||    
T  38218319 agtcaatgaaaacgtgttagtggttgt 38218293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 43842031 - 43841879
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | ||||||| |||| || ||||||||||| |||||||||||||||| ||| |||||||||||||||||||||| ||||||||| |||||    
T  43842031 ttgaagaaaatgtaagaaaataggtgaattgaagaatgaatgtatttgttgaagatgaaagtctatttatagcctaaaacaagtcataggtcattaatac 43841932  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatg 149  Q
    ||||||| ||||||| |   ||||  |||||||| |||||||| |||||||||    
T  43841931 agtcaattaaaacgtcttagtggttgttgtaaccgtccaaacccacattaatg 43841879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 9036253 - 9036101
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    ||||| |||| | |||||||||||| || ||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||  || ||||| |||||    
T  9036253 ttgaataaaatgtaagaaaagaggtgaaatgaagaatgaatgtatttgttgaagatgaaagcctatttatagcctaaaa-aagtcctaagtcattaatac 9036155  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatga 150  Q
    |||||||||||||||||   ||||  |||||||| |||||||| ||||||||||    
T  9036154 agtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatga 9036101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 37 - 149
Target Start/End: Complemental strand, 56463767 - 56463651
Alignment:
Q  37 tgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtata-ggtcatgaatacagtcaatgaaaacgtgt---tggtgattgtaaccat 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||||||| ||||   ||||  |||||||| |    
T  56463767 tgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtccacggtcattaatacagtcaatgaaaatgtgttagtggttgttgtaaccgt 56463668  T
Q  133 ccaaacctacattaatg 149  Q
    ||||||| |||||||||    
T  56463667 ccaaacccacattaatg 56463651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 39807431 - 39807350
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaa 82  Q
    |||||||||| | |||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  39807431 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgaaggaatttgttgaagatgaaagcctatttatagcgtaaaacaa 39807350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 40602725 - 40602808
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| |||||||||||| ||||||||||||||||  ||||||||||||| ||||||||||||||| | ||||||||    
T  40602725 ttgaagaaaaagtaagaaaagaggtgaagtgaagaatgaaggagtttgttgaagatgtaagcctatttatagcattaaacaagt 40602808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 20516650 - 20516734
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtga---agaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaa 82  Q
    |||||||||||| |||||||||||| ||||||   |||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  20516650 ttgaagaaaaagtaagaaaagaggtgaagtgatgaagaatgaaggaatttgttgaagatgcaagcctatttatagcctaaaacaa 20516734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 49604488 - 49604553
Alignment:
Q  7 aaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatag 72  Q
    |||||| |||||||||||| ||||||  |||||||| |||||||||||||| ||||||||||||||    
T  49604488 aaaaagtaagaaaagaggtgaagtgatcaatgaaggaatttgttgaagatgcaagcctatttatag 49604553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 56084099 - 56084179
Alignment:
Q  4 aagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    ||||||||| ||||||||| |  |||||||||||||| | |||||||||| ||| |||| |||||||||||| ||||||||    
T  56084099 aagaaaaagtaagaaaagatgagaagtgaagaatgaatgaatttgttgaatatgcaagcatatttatagccttaaacaagt 56084179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 34953712 - 34953601
Alignment:
Q  7 aaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatacagtcaa 105  Q
    |||||| ||||||| |||| ||||||||||| |||   ||||||||||||| || |||||||||||||||||| ||||  ||| |||| | |||||||||    
T  34953712 aaaaagtaagaaaaaaggtgaagtgaagaataaagaagtttgttgaagatgcaaacctatttatagcctaaaataagtcctagatcataactacagtcaa 34953613  T
Q  106 tgaaaacgtgtt 117  Q
      ||||||||||    
T  34953612 ataaaacgtgtt 34953601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 9183386 - 9183338
Alignment:
Q  27 aagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcct 75  Q
    |||||||||||||| | |||||||||||||| ||||| |||||||||||    
T  9183386 aagtgaagaatgaaagaatttgttgaagatgaaagccaatttatagcct 9183338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 13721373 - 13721426
Alignment:
Q  31 gaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| |  ||||||||||  |||||| |||||||||||||||||||    
T  13721373 gaagaatgaaggaaaatgttgaagatccaagcctttttatagcctaaaacaagt 13721426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 16684356 - 16684303
Alignment:
Q  31 gaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| |  ||||||||||  |||||| |||||||||||||||||||    
T  16684356 gaagaatgaaggaaaatgttgaagatccaagcctttttatagcctaaaacaagt 16684303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 2e-63; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 32529783 - 32529966
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||    
T  32529783 ttgaagaaaagggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatac 32529882  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaagtttt 183  Q
    ||| |||||||||||||| ||| |||||||| |||||||| |||||||||  ||||||||||||||| |||||| |||||||||    
T  32529883 agttaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatggctctctttcaaaagaacccaatgctgaagtttt 32529966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 39353281 - 39353464
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagta-taggtcatgaatac 99  Q
    |||||||||| |||||||||||||  |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |  |||||||| |||||    
T  39353281 ttgaagaaaatggaagaaaagaggcgaagtgaagaatgaatgtatctgttgaagatggaagcctatttatagcctaaaacaaatcctaggtcattaatac 39353380  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaagtttt 183  Q
    |||||||||||||||||| ||| |||||||| |||||||| |||||||||| |||||||||||||||||||||| ||| |||||    
T  39353381 agtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatgactctctttcaaaagaatccaatgctgaggtttt 39353464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 41193868 - 41193692
Alignment:
Q  4 aagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatacagt 102  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||| | ||||||    
T  41193868 aagaaaatggaagaaaagaggtgaagtggagaatgaaggtatttgttgaagatggaagcatatttatagcctaaaacaagtcctaggtcattactacagt 41193769  T
Q  103 caatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    ||||||||||||||| ||| |||||||| |||||||| ||||||||   ||||||||||||||||| |||| |||||    
T  41193768 caatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatagctctctttcaaaagaatctaatgctgaag 41193692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 49166263 - 49166089
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagta-taggtcatgaatac 99  Q
    ||||| |||| ||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| |||| | |||    
T  49166263 ttgaacaaaatggaagaaaagatgtgaagtgaagaatgaaggtatttgt-gaagatggaagcctatttatagcctaaaacaagtcctagatcattactac 49166165  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgtt 175  Q
    ||||||||||||| |||| ||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  49166164 agtcaatgaaaacatgttagtggttgtaaccgtcctaacctacattaatgactctctttcaaaagaatccaatgtt 49166089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 149310 - 149460
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  149310 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgtaagtatttgttgaagatggaagcctatttatagcctaaaacaagtcataggtcattaatac 149409  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatga 150  Q
    |||||||||||||||||| ||| |||||||| |||||||| || |||||||    
T  149410 agtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacgttaatga 149460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 47013869 - 47013720
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||| |||||    
T  47013869 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaaacctatttatagcctaaaacaagtcctaggtcattaatac 47013770  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
     ||||||||||||||||| ||| ||||||||||||||||| |||||||||    
T  47013769 ggtcaatgaaaacgtgttagtggttgtaaccatccaaacccacattaatg 47013720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 6936451 - 6936629
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | ||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  || ||||| |||||    
T  6936451 ttgaagaaaatgaaagaaaaaaggtgaagtgaagaatgaatgtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaagtcattaatac 6936550  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    |||||||||||||||||| ||| ||||||||  ||||||| | |||||||  |||||||||||||||| |||||||||||    
T  6936551 agtcaatgaaaacgtgttagtggttgtaaccgcccaaacccatattaatggctctctttcaaaagaat-caatgttgaag 6936629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 227613 - 227762
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||| |||||    
T  227613 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttaaagatggaagtctatttatagcctaaaacaagtcctaggtcattaatac 227712  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||| ||| |||||||| |||||||| |||| ||||    
T  227713 agtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacatcaatg 227762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 47646900 - 47647052
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||    
T  47646900 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatac 47646999  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||   ||||  |||||||| |||||||| |||||||||    
T  47647000 agtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatg 47647052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 36402864 - 36402711
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||| |||||    
T  36402864 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttataacctaaaacaagtcctaggtcattaatac 36402765  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatga 150  Q
    |||||||||||||||||   ||||  |||||||| |||||||| ||||||||||    
T  36402764 agtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatga 36402711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 40937201 - 40937348
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    ||||||||||  ||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |  |||||||| |||||    
T  40937201 ttgaagaaaatagaagaaaagaggtgaagtgaaaaatgaaagtatttgttgaagatggaagcctatttatagcctaaaacaaatcctaggtcattaatac 40937300  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaa 147  Q
    |||||||||||||||||| ||| |||||||| |||||||| |||||||    
T  40937301 agtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaa 40937348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 31765356 - 31765178
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||| | ||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||| | | |    
T  31765356 ttgaagaagatggaagaaagaaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttataacctaaaacaagtcctaggtcattagtgc 31765257  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    ||||||| |||||||||| ||| |||||||| | ||||||||||||||||| || |   |||||||||||||||||||||    
T  31765256 agtcaataaaaacgtgttagtggttgtaaccgttcaaacctacattaatgactc-cgcacaaaagaatccaatgttgaag 31765178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 10509375 - 10509223
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||  |||||||| |||||    
T  10509375 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatagaagcctatttatagcctaaaagaagtcctaggtcattaatac 10509276  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||   ||||  |||||||| |||||||| |||||||||    
T  10509275 agtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatg 10509223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 26502345 - 26502219
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||  |||||||| |||||    
T  26502345 ttgaagaaaatgcaagaaaagaggtgaagtgaagaatgtaggtatttgttgaagatggaagcctatttatagtctaaaacaagtcctaggtcattaatac 26502246  T
Q  100 agtcaatgaaaacgtgttggtgattgt 126  Q
    |||||||||||||||||| ||| ||||    
T  26502245 agtcaatgaaaacgtgttagtggttgt 26502219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 41174793 - 41174910
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||| |||||    
T  41174793 ttgaagaaaatgtaagaaaagatgtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctatgtcattaatac 41174892  T
Q  100 agtcaatgaaaacgtgtt 117  Q
    ||||||||||||||||||    
T  41174893 agtcaatgaaaacgtgtt 41174910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 39586557 - 39586706
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    ||||| |||| | ||||||| |||| || ||||||||||| |||||||||||| ||||||||||||||||||| |||||||| |  |||||||| |||||    
T  39586557 ttgaataaaatgtaagaaaataggtgaattgaagaatgaaagtatttgttgaaaatggaagcctatttatagcttaaaacaaatcctaggtcattaatac 39586656  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    ||||||||||| |||||| ||| ||||||||||||||||| |||||||||    
T  39586657 agtcaatgaaaccgtgttagtggttgtaaccatccaaacccacattaatg 39586706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 33843500 - 33843583
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||| | || ||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  33843500 ttgaagaaaatgtaaaaaaagaggtgaagtgaagaatgaaggaatttgttgaagatggaaacctatttatagcctaaaacaagt 33843583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 53393929 - 53394012
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||| | |||||||||| |||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  53393929 ttgaagaaaatgaaagaaaagagataaagtgaagaatgaaggaatttgttgaacatgcaagcctatttatagcctaaaacaagt 53394012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 42899201 - 42899284
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||| | ||||||| |||| |||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  42899201 ttgaagaaaatgtaagaaaaaaggtgaagtgaagaatgaaggaatttgttgaaaatgcaagcctatttatagcctaaaacaagt 42899284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 51329079 - 51328999
Alignment:
Q  4 aagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    ||||||| | || ||||||||| |||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  51329079 aagaaaatgtaataaaagaggtgaagtgaagaatgaaggaatttgttgaacatgcaagcctatttatagcctaaaacaagt 51328999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 25214685 - 25214605
Alignment:
Q  4 aagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    ||||||||| |||||||| ||| || ||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||||    
T  25214685 aagaaaaagtaagaaaagtggtgaattgaagaatgaaggaatttgttaaagatgtaagtctatttatagcctaaaacaagt 25214605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 27023911 - 27023961
Alignment:
Q  7 aaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatg 57  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||||||||    
T  27023911 aaaaagtaagaaaagaggtgaagtgaagaatgaaggaatttgttgaagatg 27023961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 10494871 - 10494800
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatag 72  Q
    |||||||||| | ||||||| |||| |||||||||||||||| | |||||||||||  |||| |||||||||    
T  10494871 ttgaagaaaatgtaagaaaaaaggtgaagtgaagaatgaaggaaattgttgaagatctaagcatatttatag 10494800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 45405785 - 45405668
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    ||||| |||| | |||||| ||||| |||||||||||||| | | |||||||||||  || ||| |||||||||| |||  ||| ||||||||| | |||    
T  45405785 ttgaacaaaatgtaagaaaggaggtgaagtgaagaatgaaagaaattgttgaagatccaaacctttttatagccttaaatcagtcataggtcataagtac 45405686  T
Q  100 agtcaatgaaaacgtgtt 117  Q
    ||||||  ||||||||||    
T  45405685 agtcaaataaaacgtgtt 45405668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12717635 - 12717690
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagat 56  Q
    |||||| ||| | |||||||||||| |||||||||||||||| | |||||||||||    
T  12717635 ttgaagtaaatgtaagaaaagaggtgaagtgaagaatgaaggaaattgttgaagat 12717690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 9127054 - 9127107
Alignment:
Q  31 gaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| |  ||||||||||  |||||| |||||||||||||||||||    
T  9127054 gaagaatgaaggaaaatgttgaagatccaagcctgtttatagcctaaaacaagt 9127107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 9135161 - 9135214
Alignment:
Q  31 gaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| |  ||||||||||  |||||| |||||||||||||||||||    
T  9135161 gaagaatgaaggaaaatgttgaagatccaagcctgtttatagcctaaaacaagt 9135214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 48062203 - 48062256
Alignment:
Q  31 gaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| |  ||||||||||  |||||| |||||||||||||||||||    
T  48062203 gaagaatgaaggaaaatgttgaagattcaagcctttttatagcctaaaacaagt 48062256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 49327427 - 49327374
Alignment:
Q  31 gaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| |  ||||||||||  |||||| |||||||||||||||||||    
T  49327427 gaagaatgaaggaaaatgttgaagattcaagcctttttatagcctaaaacaagt 49327374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 1e-60; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 13278677 - 13278855
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |  ||||| |||||    
T  13278677 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctttgtcattaatac 13278776  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaa 178  Q
    |||||||||||||||||| ||| |||||||| ||||| || |||||||||  |||||||||||||||||||||||||||    
T  13278777 agtcaatgaaaacgtgttagtggttgtaaccgtccaaccccacattaatggctctctttcaaaagaatccaatgttgaa 13278855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 31994231 - 31994052
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagta-taggtcatgaatac 99  Q
    |||||||||| |||||||||||||| |||||| |||||||| ||||||||||| |||||| |||||||||||||||||||||||  |||||||| | |||    
T  31994231 ttgaagaaaatggaagaaaagaggtgaagtgatgaatgaagatatttgttgaatatggaaacctatttatagcctaaaacaagtcctaggtcattactac 31994132  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||||||||  |||||||||||||||||||||| |||||    
T  31994131 agtcaatgaaaacgtgttagtggttgtaaccgtccaaacctacattaatggctctctttcaaaagaatccaatgctgaag 31994052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 7942896 - 7942717
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||| || |||||||| ||||||||||  |||||| | | |||    
T  7942896 ttgaagaaaatggaagaaaagaggtgaagtgaacaatgaaggtatttgttgaagatggaagtctgtttatagcataaaacaagtcctaggtccttactac 7942797  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    ||||||||||||| |||| ||| |||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  7942796 agtcaatgaaaacatgttagtggttgtaaccgtccaaacctacattaatggctctctttcaaaagaatccaatgttgaag 7942717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 1210085 - 1209905
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| ||||||||||| || |||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||  |||||||| ||||     
T  1210085 ttgaagaaaatggaagaaaagatgtgaagtgaagaatgcaggtatttgtcgaagatggaagcctatttatagcttaaaacaagtcctaggtcattaataa 1209986  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctaca-ttaatgattctctttcaaaagaatccaatgttgaag 179  Q
    |||||||||||||||||| ||| |||||||| |||||||| ||| ||||||  ||||||||||||||||||||||||||||    
T  1209985 agtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacatttaatggctctctttcaaaagaatccaatgttgaag 1209905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 6404099 - 6404248
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||    
T  6404099 ttgaagaaaatgtaagaaaagaggtgatgtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatac 6404198  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
     ||||| ||||||||||| ||| |||||||| ||||||||  ||||||||    
T  6404199 ggtcaacgaaaacgtgttagtggttgtaaccgtccaaacccgcattaatg 6404248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 15911759 - 15911911
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||    
T  15911759 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatcaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatac 15911858  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||| ||||   ||||  |||||||| |||||||| |||||||||    
T  15911859 agtcaatgaaaatgtgttagtggttgttgtaaccgtccaaacccacattaatg 15911911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 17308941 - 17309092
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| |||||    
T  17308941 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgaaggtatttg-tgaagatggaagcctatttatagccgaaaacaagtcataggtcattaatac 17309039  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||   ||||  |||||||| |||||||| |||||||||    
T  17309040 agtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatg 17309092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 44760076 - 44760225
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| | ||||| ||||||||||| | |||||||||||||| |||||||||||||||||||||  |||||||| |||||    
T  44760076 ttgaagaaaatgtaagaaaagaggtgatgtgaataatgaaggtatatcttgaagatggaagcttatttatagcctaaaacaagtcctaggtcattaatac 44760175  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||| ||| |||||||| |||||||| |||||||||    
T  44760176 agtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatg 44760225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 17137863 - 17137707
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcc----tatttatagcctaaaacaagt-ataggtcatga 95  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||    |||||||||||||||||||||  |||||||| |    
T  17137863 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatagaagcctgtttatttatagcctaaaacaagtcctaggtcatta 17137764  T
Q  96 atacagtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||||||   ||||  |||||||| |||||||| |||||||||    
T  17137763 atacagtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatg 17137707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 18137572 - 18137721
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| ||||||||| || | ||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||  |||||||| | |||    
T  18137572 ttgaagaaaatggaagaaaaaagatgaagtgaagaatgaaggtatttgttgaagataaaagcctatttatagcctaaaataagtcctaggtcattagtac 18137671  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    | |||||||||||||||| ||| |||||||| ||| ||||||||||||||    
T  18137672 aatcaatgaaaacgtgttagtggttgtaaccgtcccaacctacattaatg 18137721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 38703740 - 38703588
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||  |||||||| |||||    
T  38703740 ttgaagaaaatgtaagaaaagaggtgaagtgaagaataaaggtatttgttgaagatggaagcc-atttatagcctaaaagaagtcctaggtcattaatac 38703642  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatga 150  Q
    |||||||||||||||||   ||||  |||||||| |||||||| ||||||||||    
T  38703641 agtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatga 38703588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 45117054 - 45117208
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaag-------atggaagcctatttatagcctaaaacaagt-ataggtca 92  Q
    |||||||||| |||||||||||||| |||||||||||||| |||||||||||||       ||||||||||||||||||||||||||||||  |||||||    
T  45117054 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaagtatttgttgaagatggaagatggaagcctatttatagcctaaaacaagtcttaggtca 45117153  T
Q  93 tgaatacagtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaa 147  Q
    | |||| |||||||||||||||||| ||| |||||||| |||||| | |||||||    
T  45117154 ttaatagagtcaatgaaaacgtgttagtggttgtaaccgtccaaatccacattaa 45117208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 30490834 - 30490682
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    ||||| |||| | |||||||||| | | |||||||||| |||||||||||||||||| |||||||||||| |||||||||||||  |||||||| |||||    
T  30490834 ttgaaaaaaatgtaagaaaagagctgaggtgaagaatgtaggtatttgttgaagatgaaagcctatttatggcctaaaacaagtcctaggtcattaatac 30490735  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||   ||||  |||||||| |||||||| |||||||||    
T  30490734 agtcaatgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatg 30490682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 38207468 - 38207551
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||| | |||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  38207468 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatgtaagcatatttatagcctaaaacaagt 38207551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 21485412 - 21485295
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| |||||||||||||| | |||||||||| ||| |||| |||||||||||||||||||||  |||||||| | |||    
T  21485412 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgaaagaatttgttgaatatgaaagcttatttatagcctaaaacaagtcctaggtcataagtac 21485313  T
Q  100 agtcaatgaaaacgtgtt 117  Q
    | ||||| ||||||||||    
T  21485312 aatcaataaaaacgtgtt 21485295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 33945914 - 33945994
Alignment:
Q  4 aagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    ||||||||| |||||||| ||| |||||||||||||||| |||||||||||||| || ||||| |||||||||||||||||    
T  33945914 aagaaaaagtaagaaaagtggtgaagtgaagaatgaaggaatttgttgaagatgcaaacctatatatagcctaaaacaagt 33945994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 1114722 - 1114805
Alignment:
Q  32 aagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatacagtcaatgaaaacgt 114  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||  |||||||| | || |||||||||||||||    
T  1114722 aagaatgaaggtatttgttgaagatgaaagcctatttatagcttaaaacaagtcctaggtcattagtatagtcaatgaaaacgt 1114805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 37128046 - 37127963
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| ||||||| |||| |||||||||||||| | ||||||| || ||| |||| |||||||||||||||||||||    
T  37128046 ttgaagaaaaagtaagaaaataggtgaagtgaagaatgaaagaatttgttaaaaatgcaagcttatttatagcctaaaacaagt 37127963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 1115196 - 1115261
Alignment:
Q  114 tgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    |||||||  |||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  1115196 tgttggtagttgtaaccgtccaaacctacattaatggctctctttcaaaagaatccaatgttgaag 1115261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 21649821 - 21649751
Alignment:
Q  14 aagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    ||||||| |||| |||||||||||||||  ||||| |||||||||||| ||||||||||||| ||||||||    
T  21649821 aagaaaaaaggtgaagtgaagaatgaagaaatttgatgaagatggaagactatttatagccttaaacaagt 21649751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 24168500 - 24168583
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||| | |||||||||| | ||||||||| | |||| ||||| |||| ||| ||| ||||||||||||||||||||||    
T  24168500 ttgaagaaaatgaaagaaaagagcttaagtgaagagtaaaggaatttggtgaacatgcaagtctatttatagcctaaaacaagt 24168583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 18963339 - 18963453
Alignment:
Q  4 aagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcc-taaaacaagtataggtcatgaatacagt 102  Q
    ||||||| | |||||| ||||| |||||||||||||||| | |||||||||||  |||||| ||||||||| |||| |||  ||||||||  | ||||||    
T  18963339 aagaaaatgtaagaaaggaggtgaagtgaagaatgaaggaaattgttgaagatccaagcctttttatagccttaaatcaatcataggtcacaagtacagt 18963438  T
Q  103 caatgaaaacgtgtt 117  Q
    |||  ||||||||||    
T  18963439 caaataaaacgtgtt 18963453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 34948476 - 34948567
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcat 93  Q
    |||||||||| | |||||| ||||| |||  ||||||||||| |  |||| |||||  |||||| ||||||||||||||||||| |||||||||    
T  34948476 ttgaagaaaatgtaagaaaggaggtgaag--aagaatgaaggaaaatgttaaagattcaagcctttttatagcctaaaacaagtcataggtcat 34948567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 15257260 - 15257143
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    ||||| |||| | |||||| ||||| |||||||||||||||  | || ||||||||  ||| || |||||||||| |||  ||| ||||||||| | |||    
T  15257260 ttgaacaaaatgtaagaaaggaggtgaagtgaagaatgaagaaaattattgaagatccaagtctttttatagccttaaatcagtcataggtcataagtac 15257161  T
Q  100 agtcaatgaaaacgtgtt 117  Q
    ||||||  ||||||||||    
T  15257160 agtcaaataaaacgtgtt 15257143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 16739548 - 16739468
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||| | |||||||||||| |   ||||||| |||| |  ||||||||||  |||||| |||||||||||||||||||    
T  16739548 ttgaagaaaatgtaagaaaagaggtga---gaagaataaaggaaaatgttgaagatccaagcctttttatagcctaaaacaagt 16739468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 9e-59; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 32337794 - 32337973
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||| | |||    
T  32337794 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaccaagtcctaggtcattagtac 32337893  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    | |||||||||||||||| |||||||||||| |||||||||||||| |||  |||| ||||||||||||||||| |||||    
T  32337894 aatcaatgaaaacgtgttagtgattgtaaccgtccaaacctacattgatggctctcattcaaaagaatccaatgctgaag 32337973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 43098699 - 43098518
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||| | ||     
T  43098699 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaatgtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattattat 43098600  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaagtt 181  Q
    |||||||||||||||||| ||| |||||||| |||||||| |||||||||  ||||||||||||||||||| |||| |||||    
T  43098599 agtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatggctctctttcaaaagaatccactgttcaagtt 43098518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 23144262 - 23144082
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtca-tgaata 98  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| | | ||    
T  23144262 ttgaagaaaaaggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttataacctaaaacaagtcctaggtcatttacta 23144163  T
Q  99 cagtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    |||||||||||||| |||| ||| |||||| | ||||||||||||||||||| |||||||| |||||||| |||| |||||    
T  23144162 cagtcaatgaaaacatgttagtggttgtaatcgtccaaacctacattaatgactctctttctaaagaatcaaatgctgaag 23144082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 6347279 - 6347458
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| | |||||||||||||||||||  |||||||| | |||    
T  6347279 ttgaagaaaatggaagaaaagaggtgaaatgaagaatgaaggtatttgttgaagatggaagcatgtttatagcctaaaacaagtcctaggtcattagtac 6347378  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    ||| |||||||||||||| ||| |||||||| |||||||| |||||||||  |||||||||||||||||||||| |||||    
T  6347379 agtaaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatggctctctttcaaaagaatccaatgctgaag 6347458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 37098317 - 37098496
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||   | ||||| |||||    
T  37098317 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatgaaagcttatttatagcctaaaacaagtcccatgtcattaatac 37098416  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    ||||||| |||||||||| ||| |||||||| || ||||| |||||||||  ||||||||||||||||||||||||||||    
T  37098417 agtcaataaaaacgtgttagtggttgtaaccgtctaaacccacattaatggctctctttcaaaagaatccaatgttgaag 37098496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 39318749 - 39318600
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  39318749 ttgaagaaaatggaagaaaagaggtgaagtgaataatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcataggtcattaatac 39318650  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||| ||| |||||||| |||||||| ||| |||||    
T  39318649 agtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacaataatg 39318600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 627358 - 627537
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    ||||||||||  |||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||| |||| | |||    
T  627358 ttgaagaaaattgaagaaaagaggtggagtgaagaatgaaggtatttgttgaagatagaagcctatttatagcctaaaacaagtcttagttcattagtac 627457  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    ||||||||||||| |||| ||| |||||||| |||||| ||||||| |||  ||||| ||||||||||||||||||||||    
T  627458 agtcaatgaaaacttgttagtggttgtaaccgtccaaagctacattgatggctctctctcaaaagaatccaatgttgaag 627537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 31701198 - 31701022
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| | |||    
T  31701198 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattactac 31701099  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    ||||||||||||||||||  || || ||||   | ||||| ||||||||   |||||||||||||||| |||||||||||    
T  31701098 agtcaatgaaaacgtgttattggttataac---cgaaacccacattaatagctctctttcaaaagaattcaatgttgaag 31701022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 586565 - 586386
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    ||||||||||  |||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||| |||| | |||    
T  586565 ttgaagaaaattgaagaaaagaggtggagtgaagaatgaaggtatttgttgaagatagaagcctatttatagcctaaaacaagtcttagttcattagtac 586466  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    ||||||||||||| |||| ||| |||||||| |||||| ||||| | |||  ||||| ||||||||||||||||||||||    
T  586465 agtcaatgaaaacttgttagtggttgtaaccgtccaaagctacactgatggctctctctcaaaagaatccaatgttgaag 586386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 40105403 - 40105253
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||| |||||    
T  40105403 ttgaagaaaatggaagaaaagaggtgaattgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcctaggtcattaatac 40105304  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatga 150  Q
    |||||||||||||||||| ||| ||| |||| |||||||| ||| ||||||    
T  40105303 agtcaatgaaaacgtgttagtggttgcaaccgtccaaacccacaataatga 40105253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 35684169 - 35684020
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagta-taggtcatgaatac 99  Q
    |||||||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| || ||    
T  35684169 ttgaagaaaatggaagaaaattggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactgggtcattaaaac 35684070  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||| ||| |||||||| |||||||| ||| |||||    
T  35684069 agtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacaataatg 35684020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 8240141 - 8239992
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || || || |||||    
T  8240141 ttgaagaaaatggaagaaaaaaggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctatgttattaatac 8240042  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    ||| |||||||||||||| ||| |||||||| |||||||| ||| |||||    
T  8240041 agttaatgaaaacgtgttagtggttgtaaccgtccaaacccacaataatg 8239992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 20091870 - 20092023
Alignment:
Q  27 aagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatacagtcaatgaaaacgtgttggtgattg 125  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  || ||||| | ||| ||||||||||||||||| ||| |||    
T  20091870 aagtgaagaatgaaggtatttgttgaagatggaagcctatatatagcctaaaacaagtcctatgtcattactacggtcaatgaaaacgtgttagtggttg 20091969  T
Q  126 taaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    ||||  |||||||| |||||||||  ||||||||||||||||| ||||||||||    
T  20091970 taactgtccaaaccgacattaatggctctctttcaaaagaatcaaatgttgaag 20092023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 11076212 - 11076362
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||||||||||| ||||||| |||||||||| |||||||||||  |||||||| |||||    
T  11076212 ttgaagaaaatggaagaaaagaggtgaagtgaagaattaaggtatttgttgaaaatggaagtctatttatagtctaaaacaagtcctaggtcattaatac 11076311  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatga 150  Q
    ||||||| |||||||||| ||| |||||||| |||||||| ||| ||||||    
T  11076312 agtcaataaaaacgtgttagtggttgtaaccgtccaaacccacaataatga 11076362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 39260446 - 39260293
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||  |||||||| |||||    
T  39260446 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgaatgtatttgttgaagatagaagcctatttatagcctaaaacaagtcctaggtcattaatac 39260347  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatga 150  Q
    ||||||| |||||||||   ||||  |||||||| |||||||| ||||||||||    
T  39260346 agtcaataaaaacgtgttaatggttgttgtaaccgtccaaacccacattaatga 39260293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 32947063 - 32947180
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||  |||||||| |||||    
T  32947063 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatagaagcctacttatagcctaaaacaagtcctaggtcattaatac 32947162  T
Q  100 agtcaatgaaaacgtgtt 117  Q
    ||||||||||||||||||    
T  32947163 agtcaatgaaaacgtgtt 32947180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 28284449 - 28284514
Alignment:
Q  16 gaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaaca 81  Q
    |||||||||| |||||||||||||||| |||||||||||||| || |||||||| |||||||||||    
T  28284449 gaaaagaggtgaagtgaagaatgaaggaatttgttgaagatgcaaacctatttacagcctaaaaca 28284514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 11457022 - 11457092
Alignment:
Q  14 aagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| ||||||| || ||||  ||||||||||||||||||||| |||||| ||||||||||||    
T  11457022 aagaaaagaggttaagtgaaaaaggaagaaatttgttgaagatggaagcctgtttataacctaaaacaagt 11457092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 42132022 - 42131968
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaaga 55  Q
    |||||||||| | | |||||||||| |||||||||||||||||||||||||||||    
T  42132022 ttgaagaaaatgtacgaaaagaggtgaagtgaagaatgaaggtatttgttgaaga 42131968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 4258854 - 4258771
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||| | |||||| ||||| ||||||||||||| || | |||||||||||  || ||| |||||||||| ||||||||    
T  4258854 ttgaagaaaatgtaagaaatgaggtgaagtgaagaatgacggaaattgttgaagatccaaacctttttatagccttaaacaagt 4258771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 13546309 - 13546234
Alignment:
Q  104 aatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    ||||||||  |||| ||| |||||||| |||||||  |||||||||  |||||||||||||||||||||| |||||    
T  13546309 aatgaaaagctgttagtggttgtaaccgtccaaacacacattaatggctctctttcaaaagaatccaatgctgaag 13546234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 13678164 - 13678239
Alignment:
Q  104 aatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    ||||||||  |||| ||| |||||||| |||||||  |||||||||  |||||||||||||||||||||| |||||    
T  13678164 aatgaaaagctgttagtggttgtaaccgtccaaacacacattaatggctctctttcaaaagaatccaatgctgaag 13678239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 13546343 - 13546304
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaa 40  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  13546343 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaa 13546304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 13678130 - 13678169
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaa 40  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  13678130 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaa 13678169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 24830776 - 24830829
Alignment:
Q  31 gaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| |  ||||||||||  |||||| |||||||||||||||||||    
T  24830776 gaagaatgaaggaaaatgttgaagatctaagcctttttatagcctaaaacaagt 24830829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 32124598 - 32124533
Alignment:
Q  4 aagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctattta 69  Q
    ||||||||| ||||||||| |  |||||||||||||| | |||| |||| |||| |||||||||||    
T  32124598 aagaaaaagtaagaaaagatgggaagtgaagaatgaatgaattttttgacgatgcaagcctattta 32124533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 9e-59; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 31318518 - 31318697
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||| | |||    
T  31318518 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcctaggtcattactac 31318617  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatgattctctttcaaaagaatccaatgttgaag 179  Q
    |||||||||||||||||| ||| |||||||| |||||||| |||||||||  || ||||||||||||||||||| |||||    
T  31318618 agtcaatgaaaacgtgttagtggttgtaaccgtccaaacccacattaatggctcactttcaaaagaatccaatgctgaag 31318697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 303738 - 303891
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||| |||||    
T  303738 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaggtatttgttgaaaatggaagcctatttatagcctaaaacaagtcctaggtcattaatac 303837  T
Q  100 agtcaatgaaaacgtgttggtgattg---taaccatccaaacctacattaatga 150  Q
    | |||||||||||||||||||| |||   ||||| ||||||| |||||||||||    
T  303838 aatcaatgaaaacgtgttggtggttgttataaccgtccaaacttacattaatga 303891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 31271333 - 31271482
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  31271333 ttgaagaaaatggaagaaaagaggtgaagtgaaaaatgaaagtatttgttgaagatggaagcctatttatagcctaaaacaagtcataggtcattaatac 31271432  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    ||| |||||||||||||  ||| |||||| | |||||||| |||||||||    
T  31271433 agttaatgaaaacgtgtaagtggttgtaatcgtccaaacccacattaatg 31271482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 31723025 - 31722873
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||| |||||    
T  31723025 ttgaagaaaatgtaagaaaagagatgaagtgaagaatgaaggtctttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatac 31722926  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||   ||||  ||||||||||||||||| |||||||||    
T  31722925 agtcaatgaaaacgtgttagtggttgttgtaaccatccaaacccacattaatg 31722873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 16395299 - 16395451
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||  || ||||| ||||     
T  16395299 ttgaagaaaatggaagaaaagaggtgaagtgaagaatgaaagtatttgttgacgatggaagcctatttatagcctaaaacaagtcctatgtcattaatat 16395398  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||   ||||  ||||||||||||||||| |||||||||    
T  16395399 agtcaatgaaaacgtgttagtggttgttgtaaccatccaaacccacattaatg 16395451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 439015 - 439168
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| | ||     
T  439015 ttgaagaaaatgtaagaaaagaggtgaagtgaagaatgaaggtatttgttgaagatggaagtctatttatagcctaaaacaagtcctaggtcattagtat 439114  T
Q  100 agtcaatgaaaacgtgt---tggtgattgtaaccatccaaacctacattaatga 150  Q
    |||||| ||||||||||   ||||  |||||||| |||||||| ||||||||||    
T  439115 agtcaacgaaaacgtgttagtggttgttgtaaccgtccaaacccacattaatga 439168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 9305107 - 9304958
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| |||| ||||||||| |||||| ||||||||||||||||| ||| |  ||||||||||||||||||||||||||  |||||||| |||||    
T  9305107 ttgaagaaaatggaataaaagaggtgaagtgatgaatgaaggtatttgtttaaggtaaaagcctatttatagcctaaaacaagtcctaggtcattaatac 9305008  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||||||||||||||| ||| |||||||| || ||||| ||| |||||    
T  9305007 agtcaatgaaaacgtgttagtggttgtaaccgtcaaaacccacaataatg 9304958  T

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Target: chr6; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 20818516 - 20818633
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||||| |||| ||||||||||| ||||||||||||||||||  ||||||||| |||||| |||| ||| ||||| | |||    
T  20818516 ttgaagaaaatgtaagaaaagaggtgaagtaaagaatgaaggaatttgttgaagatggaagtatatttatagtctaaaataagtcatacgtcataagtac 20818615  T
Q  100 agtcaatgaaaacgtgtt 117  Q
    | ||||||||||||||||    
T  20818616 aatcaatgaaaacgtgtt 20818633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 17519837 - 17519942
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||||| ||| |||||| | |||||||||||| ||| |||| ||||| ||| || | ||||||||||||||||||||| |||| |||| | |||    
T  17519837 ttgaagaaaaagtaaggaaagagatgaagtgaagaatggaggaatttcttgaacatgcaaacatatttatagcctaaaacaagtcatagatcataactac 17519936  T
Q  100 agtcaa 105  Q
    ||||||    
T  17519937 agtcaa 17519942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 28546870 - 28546934
Alignment:
Q  14 aagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaa 79  Q
    |||||| ||||| ||||||||||| |||| | |||||||||||  |||||||||||||||||||||    
T  28546870 aagaaaggaggtgaagtgaagaat-aaggaaattgttgaagattcaagcctatttatagcctaaaa 28546934  T

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Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 6837350 - 6837282
Alignment:
Q  4 aagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatag 72  Q
    ||||||| | |||||||||||| |||||||||||||||| | || ||||||||  |  |||||||||||    
T  6837350 aagaaaatgtaagaaaagaggtgaagtgaagaatgaaggaaattattgaagatccagccctatttatag 6837282  T

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Target: scaffold1301 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold1301
Description:

Target: scaffold1301; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 1639 - 1788
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaag-tataggtcatgaatac 99  Q
    |||||||||| ||| ||||| |||| || ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||   || ||||| |||||    
T  1639 ttgaagaaaatggaggaaaataggtgaactgaagaatgaaggtatttgttgaagttggaagcctatttatagtctaaaacaagccttaagtcattaatac 1738  T
Q  100 agtcaatgaaaacgtgttggtgattgtaaccatccaaacctacattaatg 149  Q
    |||||| ||||||  ||| ||| |||||||| |||||||| |||||||||    
T  1739 agtcaacgaaaacaagttagtggttgtaaccgtccaaacccacattaatg 1788  T

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Target: scaffold0054 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 19176 - 19067
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt-ataggtcatgaatac 99  Q
    |||||||||| | |||||||||| | |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||  |||||||| | |||    
T  19176 ttgaagaaaatgtaagaaaagagttgaagtgaagaatgaaggaatttgttgaagatgagagcctatttatagcctaaaacaagtcttaggtcataagtac 19077  T
Q  100 agtcaatgaa 109  Q
    ||||||||||    
T  19076 agtcaatgaa 19067  T

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Target: scaffold0160 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 17394 - 17311
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| ||||||| |||| |||||||||||||| | |||||||||||||  || |||||||||||||||||||||||    
T  17394 ttgaagaaaaagtaagaaaataggtgaagtgaagaatgaaagaatttgttgaagatacaaacctatttatagcctaaaacaagt 17311  T

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Target: scaffold0048 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 51825 - 51906
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagt 84  Q
    |||||||||||| |||||||||||| |||| ||||||||||| |  ||||||||||| || |||||||||||||||||||||||    
T  51825 ttgaagaaaaagtaagaaaagaggtgaagttaagaatgaaggaa--tgttgaagatgcaaacctatttatagcctaaaacaagt 51906  T

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Target: scaffold0001 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 427321 - 427263
Alignment:
Q  17 aaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcct 75  Q
    ||||||||| |||||||||||||||| | |||||||||||| |||||||||||||||||    
T  427321 aaaagaggtgaagtgaagaatgaaggaaattgttgaagatgcaagcctatttatagcct 427263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 8264 - 8185
Alignment:
Q  1 ttgaagaaaaaggaagaaaagaggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaac 80  Q
    |||||| ||| | |||||||||||| |||||||||||||||| | ||||| |||||  ||||||| ||||||||| ||||    
T  8264 ttgaagtaaatgtaagaaaagaggtgaagtgaagaatgaaggaaattgttaaagatccaagcctagttatagccttaaac 8185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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