View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18042_high_15 (Length: 256)
Name: NF18042_high_15
Description: NF18042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18042_high_15 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 9161013 - 9161268
Alignment:
| Q |
1 |
cacagaacaagtctcaaaataaaacaaatataatttgttcaacaagtcaaacaattaactagatcagcctcattttactgacctgtaaataacataaaac |
100 |
Q |
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| T |
9161013 |
cacaaaacaagtctcaaaataaaacaaatataatttgttcaacaagtcaaacaattaactagatcagcctcattatactgacctgtaaataacataaaac |
9161112 |
T |
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| Q |
101 |
atagaaaagcaaatgatctcaatctgaattacaaacaaatatttagtgaaattaaagaggaagaatcaaaatttctaggataagttaattgacaggatat |
200 |
Q |
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| T |
9161113 |
atagaaaagcaaatgatctcaatctgaattacaaacaaatatttagtgaaattaaagaggaagaatcaaaatttctaggataagttaattgacaggatat |
9161212 |
T |
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| Q |
201 |
ttctggtatagtctatcaatggtaaaggaaattaacaaaggtacaactattgcagt |
256 |
Q |
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| T |
9161213 |
ttctggtatagtctttcaatggtaaaggaaattaacaaaggtacaactattgcagt |
9161268 |
T |
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