View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18043_high_9 (Length: 312)

Name: NF18043_high_9
Description: NF18043
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18043_high_9
NF18043_high_9
[»] chr1 (74 HSPs)
chr1 (1-302)||(50004939-50005240)
chr1 (1-165)||(38277412-38277575)
chr1 (3-167)||(34756422-34756586)
chr1 (1-124)||(40264068-40264191)
chr1 (5-164)||(15034657-15034816)
chr1 (5-124)||(32572960-32573079)
chr1 (5-162)||(4038077-4038234)
chr1 (5-162)||(44410311-44410468)
chr1 (7-164)||(27804269-27804426)
chr1 (27-124)||(37214843-37214939)
chr1 (5-162)||(15034661-15034818)
chr1 (8-160)||(28745799-28745950)
chr1 (166-302)||(4076389-4076521)
chr1 (5-124)||(23536069-23536188)
chr1 (5-124)||(27935523-27935642)
chr1 (165-302)||(26793696-26793829)
chr1 (5-164)||(4038073-4038232)
chr1 (75-162)||(6470672-6470759)
chr1 (169-302)||(19806799-19806930)
chr1 (5-92)||(30190206-30190293)
chr1 (41-159)||(45565397-45565515)
chr1 (5-154)||(27804273-27804422)
chr1 (21-89)||(25889176-25889243)
chr1 (3-154)||(28745797-28745947)
chr1 (78-168)||(8224762-8224852)
chr1 (41-130)||(5474437-5474526)
chr1 (201-302)||(9383270-9383371)
chr1 (87-164)||(23536065-23536142)
chr1 (5-160)||(50005081-50005236)
chr1 (78-164)||(26501068-26501154)
chr1 (78-167)||(28632575-28632663)
chr1 (75-164)||(31166308-31166397)
chr1 (78-162)||(24273209-24273293)
chr1 (87-167)||(27935569-27935649)
chr1 (8-160)||(34756432-34756584)
chr1 (78-153)||(37448390-37448465)
chr1 (5-144)||(38277417-38277556)
chr1 (6-124)||(45565397-45565515)
chr1 (162-264)||(30209682-30209780)
chr1 (45-124)||(17502222-17502301)
chr1 (87-162)||(30190220-30190295)
chr1 (164-271)||(4950129-4950232)
chr1 (6-48)||(51847855-51847897)
chr1 (75-124)||(15245480-15245529)
chr1 (5-50)||(26501105-26501150)
chr1 (75-168)||(43622964-43623057)
chr1 (78-162)||(47165201-47165285)
chr1 (80-159)||(37036940-37037019)
chr1 (199-278)||(49236136-49236215)
chr1 (78-144)||(37447891-37447957)
chr1 (5-78)||(6470684-6470757)
chr1 (5-78)||(24273218-24273291)
chr1 (5-50)||(32287959-32288004)
chr1 (87-160)||(40264114-40264187)
chr1 (189-282)||(42472056-42472149)
chr1 (78-143)||(44570697-44570762)
chr1 (5-50)||(47165238-47165283)
chr1 (83-167)||(29446745-29446828)
chr1 (5-73)||(43622981-43623049)
chr1 (3-78)||(28632584-28632658)
chr1 (15-78)||(31195468-31195531)
chr1 (78-165)||(49659214-49659300)
chr1 (127-165)||(17502195-17502233)
chr1 (78-144)||(31195474-31195540)
chr1 (87-153)||(32573006-32573072)
chr1 (189-291)||(32712774-32712876)
chr1 (5-50)||(8224770-8224815)
chr1 (169-263)||(12855317-12855407)
chr1 (5-50)||(31166312-31166357)
chr1 (90-163)||(32287934-32288007)
chr1 (5-165)||(44410313-44410473)
chr1 (194-302)||(614929-615037)
chr1 (10-78)||(37447900-37447968)
chr1 (212-276)||(49287979-49288043)
[»] chr4 (72 HSPs)
chr4 (3-168)||(10127974-10128139)
chr4 (5-162)||(15660185-15660342)
chr4 (1-144)||(42844561-42844704)
chr4 (3-124)||(26250909-26251030)
chr4 (5-162)||(41498489-41498647)
chr4 (5-135)||(857266-857396)
chr4 (5-154)||(28845879-28846028)
chr4 (5-162)||(1107053-1107211)
chr4 (5-160)||(7352814-7352969)
chr4 (5-124)||(11040970-11041088)
chr4 (5-166)||(7352814-7352975)
chr4 (5-165)||(4896650-4896794)
chr4 (65-162)||(36455907-36456004)
chr4 (5-102)||(49111372-49111469)
chr4 (8-162)||(28845876-28846030)
chr4 (54-162)||(14982280-14982387)
chr4 (4-72)||(31742777-31742845)
chr4 (164-291)||(45413824-45413947)
chr4 (89-162)||(11040968-11041040)
chr4 (201-302)||(33451294-33451395)
chr4 (78-162)||(2125857-2125941)
chr4 (5-165)||(15660180-15660340)
chr4 (78-162)||(31473849-31473933)
chr4 (214-302)||(36625579-36625667)
chr4 (87-162)||(49111396-49111471)
chr4 (5-166)||(1107047-1107209)
chr4 (88-166)||(1112601-1112679)
chr4 (78-156)||(1539647-1539725)
chr4 (41-170)||(26250901-26251030)
chr4 (84-165)||(36456007-36456088)
chr4 (30-162)||(857266-857398)
chr4 (41-161)||(4441338-4441449)
chr4 (88-164)||(41498575-41498651)
chr4 (3-78)||(4896716-4896791)
chr4 (166-301)||(19181457-19181588)
chr4 (189-291)||(42964500-42964602)
chr4 (91-168)||(5715738-5715815)
chr4 (78-159)||(10633035-10633116)
chr4 (5-50)||(14982282-14982327)
chr4 (78-135)||(29091164-29091221)
chr4 (5-50)||(31742876-31742921)
chr4 (54-91)||(46724195-46724232)
chr4 (162-291)||(34666341-34666470)
chr4 (11-73)||(1539649-1539711)
chr4 (105-167)||(4896643-4896705)
chr4 (4-50)||(42542979-42543025)
chr4 (237-291)||(55945706-55945760)
chr4 (85-138)||(1112704-1112757)
chr4 (5-50)||(2125859-2125904)
chr4 (230-291)||(2183295-2183356)
chr4 (5-50)||(4441339-4441384)
chr4 (93-162)||(11348327-11348396)
chr4 (5-50)||(36456038-36456083)
chr4 (5-73)||(1112607-1112675)
chr4 (5-69)||(5715746-5715810)
chr4 (78-130)||(26534525-26534577)
chr4 (5-73)||(31473851-31473919)
chr4 (6-73)||(10633035-10633102)
chr4 (65-124)||(12914060-12914119)
chr4 (79-130)||(16300209-16300260)
chr4 (3-50)||(19461762-19461809)
chr4 (78-129)||(41139506-41139557)
chr4 (5-51)||(16516173-16516219)
chr4 (78-160)||(19461725-19461807)
chr4 (78-124)||(42775643-42775689)
chr4 (9-50)||(9451158-9451199)
chr4 (5-78)||(10354344-10354417)
chr4 (114-163)||(31742875-31742924)
chr4 (5-50)||(36455909-36455954)
chr4 (5-50)||(42776639-42776684)
chr4 (237-282)||(43481367-43481412)
chr4 (78-162)||(16516171-16516255)
[»] chr7 (59 HSPs)
chr7 (5-164)||(29065817-29065976)
chr7 (5-165)||(5644674-5644834)
chr7 (1-130)||(46069423-46069549)
chr7 (5-138)||(21635887-21636020)
chr7 (5-164)||(40110735-40110895)
chr7 (5-162)||(2057397-2057554)
chr7 (1-165)||(43955514-43955675)
chr7 (5-130)||(44915197-44915322)
chr7 (5-165)||(34388262-34388422)
chr7 (189-291)||(23318992-23319094)
chr7 (193-302)||(39644867-39644976)
chr7 (5-130)||(49052788-49052912)
chr7 (5-165)||(2057392-2057552)
chr7 (169-302)||(41482463-41482592)
chr7 (5-167)||(40110739-40110902)
chr7 (5-162)||(34388267-34388424)
chr7 (5-160)||(43955519-43955671)
chr7 (75-165)||(31632719-31632809)
chr7 (5-162)||(29065821-29065978)
chr7 (5-57)||(29195711-29195763)
chr7 (5-124)||(40854007-40854127)
chr7 (5-165)||(46481943-46482102)
chr7 (78-165)||(35776930-35777017)
chr7 (5-162)||(5644679-5644836)
chr7 (78-162)||(18789221-18789305)
chr7 (78-162)||(26162112-26162196)
chr7 (87-165)||(44915192-44915270)
chr7 (78-162)||(6498740-6498824)
chr7 (199-282)||(39594604-39594687)
chr7 (201-302)||(2334029-2334133)
chr7 (5-50)||(6498777-6498822)
chr7 (202-302)||(24429661-24429762)
chr7 (87-164)||(49052784-49052860)
chr7 (7-70)||(15990895-15990958)
chr7 (1-60)||(34115649-34115708)
chr7 (78-164)||(25189201-25189287)
chr7 (93-162)||(34398938-34399008)
chr7 (78-136)||(43791116-43791174)
chr7 (5-50)||(9784943-9784988)
chr7 (5-50)||(23548623-23548668)
chr7 (5-78)||(26162121-26162194)
chr7 (5-78)||(31632724-31632797)
chr7 (5-50)||(34398961-34399006)
chr7 (79-135)||(18789544-18789600)
chr7 (214-282)||(41147921-41147989)
chr7 (199-291)||(45884695-45884787)
chr7 (237-288)||(44107783-44107834)
chr7 (78-164)||(29639190-29639276)
chr7 (78-124)||(32650611-32650657)
chr7 (5-46)||(18789262-18789303)
chr7 (5-50)||(18926816-18926861)
chr7 (5-50)||(25189238-25189283)
chr7 (5-50)||(28539180-28539225)
chr7 (115-164)||(29195707-29195756)
chr7 (5-78)||(29639199-29639272)
chr7 (5-78)||(35776939-35777012)
chr7 (12-60)||(22351874-22351922)
chr7 (78-138)||(22391562-22391622)
chr7 (87-166)||(40854053-40854133)
[»] chr6 (28 HSPs)
chr6 (5-138)||(9763036-9763169)
chr6 (4-169)||(6919709-6919873)
chr6 (5-138)||(776082-776215)
chr6 (41-162)||(9285647-9285768)
chr6 (1-164)||(9763010-9763173)
chr6 (5-160)||(6919710-6919864)
chr6 (78-162)||(1368477-1368561)
chr6 (5-124)||(9285649-9285768)
chr6 (78-168)||(34244969-34245059)
chr6 (78-165)||(28918162-28918249)
chr6 (90-144)||(15299417-15299471)
chr6 (78-168)||(29889423-29889513)
chr6 (201-282)||(18596691-18596772)
chr6 (5-50)||(34245006-34245051)
chr6 (238-302)||(8547478-8547542)
chr6 (98-166)||(8574760-8574828)
chr6 (88-144)||(15299510-15299566)
chr6 (5-73)||(28918167-28918235)
chr6 (98-168)||(8574689-8574759)
chr6 (7-73)||(15299514-15299579)
chr6 (5-50)||(29889460-29889505)
chr6 (238-302)||(8573831-8573895)
chr6 (78-162)||(13487275-13487359)
chr6 (75-138)||(6358237-6358300)
chr6 (189-276)||(14227943-14228030)
chr6 (5-78)||(1368479-1368552)
chr6 (16-73)||(15299412-15299469)
chr6 (78-135)||(34364770-34364827)
[»] chr8 (61 HSPs)
chr8 (3-162)||(3853616-3853775)
chr8 (3-162)||(3858074-3858233)
chr8 (1-144)||(13404825-13404968)
chr8 (5-169)||(17110871-17111035)
chr8 (5-165)||(17110866-17111026)
chr8 (5-83)||(37268086-37268164)
chr8 (64-160)||(4156228-4156324)
chr8 (21-168)||(40046798-40046931)
chr8 (54-124)||(42739969-42740039)
chr8 (65-162)||(14800022-14800119)
chr8 (5-162)||(33902667-33902823)
chr8 (5-160)||(3853618-3853773)
chr8 (5-160)||(3858076-3858231)
chr8 (78-162)||(24044960-24045044)
chr8 (77-164)||(11744717-11744804)
chr8 (189-302)||(556738-556851)
chr8 (201-302)||(38503885-38503985)
chr8 (87-164)||(42711364-42711441)
chr8 (78-166)||(33377296-33377384)
chr8 (78-162)||(44889354-44889438)
chr8 (199-273)||(26543900-26543975)
chr8 (5-60)||(28324688-28324743)
chr8 (78-164)||(23011732-23011818)
chr8 (249-302)||(11066502-11066555)
chr8 (5-50)||(14991694-14991739)
chr8 (7-124)||(30435250-30435365)
chr8 (5-50)||(33902669-33902714)
chr8 (41-130)||(38573433-38573522)
chr8 (5-73)||(33986006-33986074)
chr8 (78-166)||(36103097-36103185)
chr8 (3-50)||(4156279-4156326)
chr8 (5-48)||(36103103-36103146)
chr8 (237-291)||(9028688-9028742)
chr8 (8-78)||(9982642-9982711)
chr8 (79-165)||(33986001-33986087)
chr8 (5-50)||(14800072-14800117)
chr8 (5-78)||(24044962-24045035)
chr8 (78-159)||(35979003-35979084)
chr8 (5-50)||(40046806-40046851)
chr8 (5-50)||(44889356-44889401)
chr8 (78-138)||(15186816-15186876)
chr8 (78-162)||(28324661-28324745)
chr8 (5-124)||(42711324-42711437)
chr8 (79-166)||(14235-14321)
chr8 (5-48)||(515570-515613)
chr8 (78-129)||(13144616-13144667)
chr8 (21-160)||(13404829-13404968)
chr8 (103-162)||(31807409-31807467)
chr8 (78-164)||(1088276-1088362)
chr8 (78-144)||(8049272-8049338)
chr8 (237-291)||(22573142-22573196)
chr8 (78-124)||(26520438-26520484)
chr8 (78-124)||(30444932-30444978)
chr8 (78-124)||(34008819-34008865)
chr8 (237-278)||(31734323-31734364)
chr8 (5-50)||(32626070-32626115)
chr8 (6-43)||(35979047-35979084)
chr8 (189-282)||(40028781-40028874)
chr8 (78-162)||(515531-515615)
chr8 (189-269)||(3346397-3346477)
chr8 (88-124)||(7202885-7202921)
[»] chr2 (60 HSPs)
chr2 (3-162)||(41461515-41461674)
chr2 (54-164)||(27033488-27033598)
chr2 (5-162)||(784795-784952)
chr2 (5-162)||(14365702-14365858)
chr2 (5-124)||(14537201-14537320)
chr2 (193-301)||(40626432-40626540)
chr2 (5-154)||(11716410-11716550)
chr2 (5-164)||(14365698-14365856)
chr2 (164-302)||(18665098-18665232)
chr2 (1-88)||(44256181-44256267)
chr2 (5-165)||(41461512-41461672)
chr2 (5-129)||(14954268-14954393)
chr2 (5-165)||(784790-784950)
chr2 (195-251)||(18881821-18881877)
chr2 (85-164)||(17180295-17180374)
chr2 (78-160)||(11532242-11532324)
chr2 (78-160)||(11793897-11793979)
chr2 (54-162)||(10244177-10244285)
chr2 (87-163)||(14537198-14537274)
chr2 (78-165)||(10480116-10480203)
chr2 (87-162)||(11716408-11716483)
chr2 (41-165)||(11684596-11684711)
chr2 (2-78)||(11793894-11793970)
chr2 (65-124)||(3345783-3345842)
chr2 (41-124)||(11824718-11824801)
chr2 (87-165)||(17905651-17905729)
chr2 (5-78)||(11532251-11532324)
chr2 (75-144)||(40026082-40026151)
chr2 (78-162)||(13017779-13017863)
chr2 (78-162)||(45094460-45094544)
chr2 (199-270)||(6457567-6457638)
chr2 (9-60)||(29279035-29279086)
chr2 (201-291)||(40054517-40054607)
chr2 (5-70)||(17180299-17180364)
chr2 (5-78)||(27033492-27033565)
chr2 (78-135)||(32839637-32839694)
chr2 (78-154)||(30698289-30698365)
chr2 (75-138)||(740728-740791)
chr2 (79-126)||(11607257-11607304)
chr2 (7-50)||(11684603-11684646)
chr2 (237-288)||(16567767-16567818)
chr2 (79-138)||(28740620-28740679)
chr2 (193-264)||(38490532-38490603)
chr2 (78-136)||(7167656-7167714)
chr2 (78-164)||(7228001-7228087)
chr2 (78-124)||(8736430-8736476)
chr2 (11-73)||(30698289-30698351)
chr2 (78-164)||(39630223-39630308)
chr2 (238-271)||(3045708-3045741)
chr2 (5-50)||(3092284-3092329)
chr2 (214-307)||(5020200-5020293)
chr2 (238-291)||(7670385-7670438)
chr2 (5-46)||(10480121-10480162)
chr2 (87-124)||(11684674-11684711)
chr2 (5-50)||(11981582-11981627)
chr2 (5-78)||(17905656-17905729)
chr2 (108-161)||(30751365-30751418)
chr2 (9-50)||(40026070-40026111)
chr2 (199-302)||(6452432-6452535)
chr2 (78-122)||(44255674-44255718)
[»] chr3 (68 HSPs)
chr3 (22-144)||(31070424-31070546)
chr3 (5-124)||(46429434-46429553)
chr3 (5-162)||(44692822-44692979)
chr3 (5-164)||(9129342-9129501)
chr3 (5-164)||(9137449-9137608)
chr3 (1-112)||(39215888-39215999)
chr3 (5-120)||(47284268-47284383)
chr3 (5-162)||(5415785-5415942)
chr3 (9-124)||(28092220-28092335)
chr3 (36-166)||(44436254-44436384)
chr3 (5-164)||(9129346-9129505)
chr3 (5-164)||(9137453-9137612)
chr3 (3-130)||(42130692-42130819)
chr3 (5-168)||(44692824-44692987)
chr3 (5-124)||(27251932-27252051)
chr3 (5-129)||(44436260-44436384)
chr3 (5-163)||(5415782-5415940)
chr3 (86-162)||(46672799-46672875)
chr3 (82-166)||(49457339-49457423)
chr3 (87-166)||(27251978-27252057)
chr3 (78-164)||(7302344-7302430)
chr3 (199-291)||(32490872-32490964)
chr3 (78-165)||(53129831-53129918)
chr3 (41-124)||(332012-332096)
chr3 (78-154)||(21307520-21307596)
chr3 (11-143)||(31070415-31070546)
chr3 (5-112)||(46672772-46672873)
chr3 (87-162)||(39110394-39110469)
chr3 (193-291)||(48936355-48936451)
chr3 (5-47)||(46001366-46001408)
chr3 (5-94)||(39110396-39110485)
chr3 (78-167)||(42005941-42006030)
chr3 (1-50)||(44288484-44288533)
chr3 (87-168)||(46429480-46429561)
chr3 (78-154)||(19475824-19475900)
chr3 (78-162)||(47767432-47767516)
chr3 (5-73)||(47767434-47767502)
chr3 (11-78)||(19475824-19475891)
chr3 (87-162)||(37321550-37321625)
chr3 (189-276)||(45818671-45818758)
chr3 (106-165)||(46001361-46001420)
chr3 (78-144)||(30766571-30766637)
chr3 (5-51)||(42005977-42006023)
chr3 (214-283)||(32794945-32795014)
chr3 (201-254)||(39795330-39795383)
chr3 (105-162)||(47284328-47284385)
chr3 (5-78)||(48947607-48947680)
chr3 (5-50)||(49457345-49457390)
chr3 (78-162)||(31189385-31189469)
chr3 (78-162)||(37054394-37054478)
chr3 (5-73)||(37054396-37054464)
chr3 (65-165)||(40929605-40929704)
chr3 (7-78)||(21307529-21307600)
chr3 (41-124)||(25655335-25655418)
chr3 (87-154)||(28092222-28092289)
chr3 (5-72)||(31189400-31189467)
chr3 (7-50)||(35279927-35279970)
chr3 (108-166)||(35279920-35279978)
chr3 (193-291)||(40416911-40417009)
chr3 (87-124)||(332012-332049)
chr3 (78-143)||(7976567-7976632)
chr3 (78-135)||(8762153-8762210)
chr3 (5-50)||(34088573-34088618)
chr3 (5-50)||(36398014-36398059)
chr3 (5-50)||(37321552-37321597)
chr3 (75-124)||(38506861-38506910)
chr3 (255-307)||(38457762-38457814)
chr3 (194-222)||(44764176-44764204)
[»] chr5 (68 HSPs)
chr5 (5-164)||(15373962-15374121)
chr5 (5-165)||(9764335-9764495)
chr5 (5-161)||(20523135-20523291)
chr5 (5-164)||(2316376-2316535)
chr5 (1-92)||(28828417-28828508)
chr5 (5-159)||(6634017-6634170)
chr5 (5-160)||(32389974-32390129)
chr5 (5-138)||(40809343-40809476)
chr5 (5-162)||(9764340-9764497)
chr5 (5-162)||(15373960-15374117)
chr5 (5-136)||(32470884-32471015)
chr5 (78-169)||(37722880-37722971)
chr5 (84-165)||(16515099-16515180)
chr5 (29-166)||(32470878-32471015)
chr5 (41-166)||(40643856-40643980)
chr5 (5-165)||(32389974-32390134)
chr5 (5-144)||(23091980-23092119)
chr5 (5-162)||(20523133-20523290)
chr5 (195-291)||(34731234-34731330)
chr5 (5-138)||(2316380-2316514)
chr5 (75-161)||(3563278-3563364)
chr5 (1-50)||(13243516-13243565)
chr5 (78-162)||(22766952-22767036)
chr5 (87-167)||(40809336-40809416)
chr5 (89-160)||(2721557-2721628)
chr5 (5-164)||(23091965-23092123)
chr5 (78-165)||(25935276-25935363)
chr5 (78-165)||(40090400-40090487)
chr5 (85-143)||(16515023-16515081)
chr5 (85-162)||(26281262-26281339)
chr5 (5-78)||(37722889-37722962)
chr5 (82-162)||(35379344-35379423)
chr5 (78-166)||(41762201-41762289)
chr5 (2-73)||(19533907-19533978)
chr5 (3-73)||(2721560-2721630)
chr5 (78-160)||(19533893-19533975)
chr5 (5-78)||(40090409-40090482)
chr5 (78-162)||(22303856-22303940)
chr5 (5-73)||(22303870-22303938)
chr5 (78-154)||(37145487-37145563)
chr5 (6-165)||(6634012-6634170)
chr5 (5-124)||(40643856-40643974)
chr5 (78-124)||(22305132-22305178)
chr5 (78-164)||(32250084-32250169)
chr5 (75-124)||(15270837-15270886)
chr5 (75-124)||(17542344-17542393)
chr5 (5-78)||(25935285-25935358)
chr5 (5-50)||(28828369-28828414)
chr5 (78-154)||(9894308-9894384)
chr5 (107-168)||(13243451-13243514)
chr5 (5-81)||(15804324-15804400)
chr5 (189-282)||(32529439-32529534)
chr5 (86-166)||(33245366-33245446)
chr5 (89-169)||(34982209-34982288)
chr5 (5-73)||(37145501-37145569)
chr5 (5-48)||(5658778-5658821)
chr5 (3-50)||(15804406-15804453)
chr5 (5-60)||(33245385-33245440)
chr5 (9-67)||(8255033-8255091)
chr5 (78-124)||(33146211-33146257)
chr5 (5-50)||(3563279-3563324)
chr5 (5-50)||(22766954-22766999)
chr5 (5-50)||(26281292-26281337)
chr5 (78-123)||(28490031-28490076)
chr5 (87-160)||(28828431-28828504)
chr5 (5-50)||(35379346-35379390)
chr5 (88-124)||(2550348-2550384)
chr5 (5-73)||(11601042-11601109)
[»] scaffold1562 (2 HSPs)
scaffold1562 (1-165)||(402-566)
scaffold1562 (5-160)||(407-562)
[»] scaffold1158 (2 HSPs)
scaffold1158 (1-165)||(2027-2191)
scaffold1158 (5-160)||(2031-2186)
[»] scaffold0044 (2 HSPs)
scaffold0044 (36-154)||(56307-56425)
scaffold0044 (7-130)||(56306-56429)
[»] scaffold0169 (2 HSPs)
scaffold0169 (78-166)||(4071-4159)
scaffold0169 (5-78)||(4077-4150)
[»] scaffold0009 (4 HSPs)
scaffold0009 (83-162)||(41997-42076)
scaffold0009 (5-78)||(41999-42072)
scaffold0009 (105-164)||(42080-42139)
scaffold0009 (5-60)||(42080-42135)
[»] scaffold0048 (2 HSPs)
scaffold0048 (80-160)||(82945-83025)
scaffold0048 (5-50)||(82945-82990)
[»] scaffold0129 (3 HSPs)
scaffold0129 (79-167)||(19193-19280)
scaffold0129 (5-78)||(19200-19272)
scaffold0129 (4-73)||(19788-19856)
[»] scaffold0318 (1 HSPs)
scaffold0318 (78-162)||(2867-2950)
[»] scaffold0400 (2 HSPs)
scaffold0400 (78-161)||(4487-4570)
scaffold0400 (5-78)||(4496-4569)
[»] scaffold0365 (2 HSPs)
scaffold0365 (78-161)||(5131-5214)
scaffold0365 (5-78)||(5140-5213)
[»] scaffold0240 (1 HSPs)
scaffold0240 (65-124)||(17561-17620)
[»] scaffold0027 (1 HSPs)
scaffold0027 (78-143)||(10905-10970)
[»] scaffold0301 (1 HSPs)
scaffold0301 (5-48)||(7153-7196)


Alignment Details
Target: chr1 (Bit Score: 262; Significance: 1e-146; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 50005240 - 50004939
Alignment:
Q  1 ttatagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  50005240 ttatagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaa 50005141  T
Q  101 gaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggtccgtttggtgcacatgatatataagaagatag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  50005140 gaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaacacactcttatggtccgtttggtgcacatgatatataagaagatag 50005041  T
Q  201 gatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaatcaccctt 300  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  50005040 gatatgataaaactatcatatcttaatctaatttgatgtttggtgcaccaataaaaaaggataatttaaacctatttctaatcctatcctaatcaccctt 50004941  T
Q  301 tg 302  Q
    ||    
T  50004940 tg 50004939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 38277575 - 38277412
Alignment:
Q  1 ttatagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||| |||||||||||||    
T  38277575 ttatagtgtgtttggatgg-ggaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggatttaaacaatataattcacctcaaa 38277477  T
Q  101 gaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    | ||||||||||  |||||||||||||||| ||||||||||||  ||||||||| ||||||||||    
T  38277476 gtagttgaattccttcaaaacattacattccctcaaaatattctctcatccaaacacactcttag 38277412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 167
Target Start/End: Complemental strand, 34756586 - 34756422
Alignment:
Q  3 atagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaaga 102  Q
    ||||||||||||||||| | |||||||||||||||| |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||     
T  34756586 atagtgtgtttggatggggaaatattttgaggtaatataatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 34756487  T
Q  103 agttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttaggg 167  Q
    |||||||||| ||||||||||||||||| ||||||| |||||  |||||||| || |||| ||||    
T  34756486 agttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacactctctaaggg 34756422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 40264191 - 40264068
Alignment:
Q  1 ttatagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||| ||||||    
T  40264191 ttatagtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcatctcaaa 40264092  T
Q  101 gaagttgaattcgctcaaaacatt 124  Q
    | |||||||||| |||||||||||    
T  40264091 gtagttgaattccctcaaaacatt 40264068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 15034816 - 15034657
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||   ||||||| || ||||||||| |||||||||||||||||||||| |||| ||    
T  15034816 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtag 15034717  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    |||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||||||    
T  15034716 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctta 15034657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 32573079 - 32572960
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  32573079 agtgtgattggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattcttttgaggtggattcaaacaatagaattcacctcaaagtag 32572980  T
Q  105 ttgaattcgctcaaaacatt 124  Q
    |||||||| |||||||||||    
T  32572979 ttgaattccctcaaaacatt 32572960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 4038077 - 4038234
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||| ||| ||||| |||||||| |||||||||||||||   ||||||| || |||||||||  ||||||||||||||||||||| |||| ||    
T  4038077 agtgtgtttgggtgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtag 4038176  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| ||||||||||||| ||| |||||||||||||  |||||||| |||||||    
T  4038177 ttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 4038234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 44410468 - 44410311
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||| | |||||||||||||||||||||| |||||||   ||||||||||||||   ||||||||| ||||||||||||||||||||  ||    
T  44410468 agtgtgtttggattggggaatattttgaggtaatgtaaagttttgagggaattcaattatttttgagtggattcagacaatagaattcacctcaaaatag 44410369  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||||||||| |||||||||||||| ||||||| ||||   |||||||| |||||||    
T  44410368 ttgaattcgcttaaaacattacattccctcaaaacattctcccatccaaatacactct 44410311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 7 - 164
Target Start/End: Original strand, 27804269 - 27804426
Alignment:
Q  7 tgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagtt 106  Q
    ||||||||||||| ||||| |||||||| |||||||| ||||||   ||||||| |||||||||||| ||||||||||||||||||| || |||| ||||    
T  27804269 tgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattcaactattttgaggtgaattcaaacaatagaattcaacttaaagtagtt 27804368  T
Q  107 gaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    ||||||  || ||||||||||||  ||||||| |||||  |||||||| |||||||||    
T  27804369 gaattccttctaaacattacatttcctcaaaacattcctccatccaaacacactctta 27804426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 37214843 - 37214939
Alignment:
Q  27 ttttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  37214843 ttttgaggtaatgtaatgttttgagagaattcaattattttgaggtggattcaaacaatagaattcacctc-aagtagttgaattccctcaaaacatt 37214939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 15034661 - 15034818
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||   ||||||| || ||| ||||| |||| |    | ||||||||||||||| ||    
T  15034661 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtag 15034760  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  15034761 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 15034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 8 - 160
Target Start/End: Complemental strand, 28745950 - 28745799
Alignment:
Q  8 gtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttg 107  Q
    |||||||||||   ||||||||| ||| |||||||| ||||||   ||||||| |||||||||||| |||||||||||||||||||||| ||| || |||    
T  28745950 gtgtttggatgagagaatattttaagggaatgtaatattttgagggaattcaactattttgaggtgaattcaaacaatagaattcaccttaaataa-ttg 28745852  T
Q  108 aattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 160  Q
    ||||| |||||| |||||||||| |||||||||||||  |||||||| |||||    
T  28745851 aattccctcaaaccattacattccctcaaaatattcccccatccaaatacact 28745799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 166 - 302
Target Start/End: Complemental strand, 4076521 - 4076389
Alignment:
Q  166 ggtccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataat 265  Q
    |||| |||||||||||||||||    || |||||||||||||||| ||||||||| ||| ||||||| || ||||||||||| ||||||||||||||||     
T  4076521 ggtcggtttggtgcacatgata----aggagataggatatgataacactatcatacccttatttaatctggtgtttggtgcatcaataggaaaggataaa 4076426  T
Q  266 ttaaacctatttctaattctatcctaatcaccctttg 302  Q
    ||||||||||| ||||| |||||||| |||| |||||    
T  4076425 ttaaacctattactaatcctatcctattcactctttg 4076389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 23536069 - 23536188
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||   ||||||| || ||||||||| |||||||||||| ||||||||| |||| ||    
T  23536069 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatataattcaccttaaagtag 23536168  T
Q  105 ttgaattcgctcaaaacatt 124  Q
    |||||||| |||||||||||    
T  23536169 ttgaattccctcaaaacatt 23536188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 27935642 - 27935523
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||   ||||||| || |||||| || |||||||||||||||||||||| |||| ||    
T  27935642 agtgtgtttggatggagaaatattttgagggaatgtaatgttttgaggaaattcaactactttgagttgaattcaaacaatagaattcacctgaaagtag 27935543  T
Q  105 ttgaattcgctcaaaacatt 124  Q
    |||||||  |||||||||||    
T  27935542 ttgaattttctcaaaacatt 27935523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 165 - 302
Target Start/End: Original strand, 26793696 - 26793829
Alignment:
Q  165 gggtccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataa 264  Q
    ||||| |||||||||||||||||    |||||| | ||||||||| |||||||||||||| ||| |||  | |||||||||||||||||| |||||||||    
T  26793696 gggtctgtttggtgcacatgata----agaagacatgatatgatagaactatcatatcctgattcaatccgttgtttggtgcaccaatagaaaaggataa 26793791  T
Q  265 tttaaacctatttctaattctatcctaatcaccctttg 302  Q
     |||||| |||||||||| |||||||||||| ||||||    
T  26793792 cttaaacttatttctaatcctatcctaatcaacctttg 26793829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 4038232 - 4038073
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| |||||||||||||| || ||||||||||||   ||||||| || ||| ||||| |||| |    | ||| ||||||||||| ||    
T  4038232 agtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagtag 4038133  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    |||||||| ||||||||||||||||| ||||||| |||||  || ||||| |||||||||    
T  4038132 ttgaattccctcaaaacattacattccctcaaaacattcccccacccaaacacactctta 4038073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 75 - 162
Target Start/End: Original strand, 6470672 - 6470759
Alignment:
Q  75 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||||||||| |||| |||||||||||| |||||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||    
T  6470672 attcaaacaatggaatccacctcaaagaatttgaattccctcaaaacattacattctctcaaaacattccgccatccaaacacactct 6470759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 169 - 302
Target Start/End: Complemental strand, 19806930 - 19806799
Alignment:
Q  169 ccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggt--gcaccaataggaaaggataatt 266  Q
    |||||||||||||||||||    || |||||||||||||||| |||||| |||||| ||| ||| || ||||||||  ||| |||||||||||||||| |    
T  19806930 ccgtttggtgcacatgata----aggagataggatatgataacactatcctatccttattcaatctggtgtttggtttgcatcaataggaaaggataaat 19806835  T
Q  267 taaacctatttctaattctatcctaatcaccctttg 302  Q
    |||||||||||||||| |||||||| |||| |||||    
T  19806834 taaacctatttctaatcctatcctattcactctttg 19806799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 30190293 - 30190206
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattc 92  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||  |||||||| |||||||||||| ||||||||||||||||||    
T  30190293 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaactattttgaggtgaattcaaacaatagaattc 30190206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 41 - 159
Target Start/End: Complemental strand, 45565515 - 45565397
Alignment:
Q  41 aatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 140  Q
    ||||||||||   ||||||| || ||||||||| ||| |||||||||||||||||| |||  |||||||||| ||||||||||||||||||||||||| |    
T  45565515 aatgttttgagggaattcaactactttgaggtgaatttaaacaatagaattcaccttaaaatagttgaattccctcaaaacattacattctctcaaaaca 45565416  T
Q  141 ttccgtcatccaaagacac 159  Q
    ||||  |||||||| ||||    
T  45565415 ttcccccatccaaacacac 45565397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 154
Target Start/End: Complemental strand, 27804422 - 27804273
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||  ||||||| || ||| || || |||| |    | ||||||||||||||  ||    
T  27804422 agtgtgtttggatggaggaatgttttgaggaaatgtaatgtttagaaggaattcaactactttaagttgaattctattgtttgaattcacctcaaaatag 27804323  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaa 154  Q
    |||||||| ||||||| ||||||||| ||||||| |||||  ||||||||    
T  27804322 ttgaattccctcaaaatattacattccctcaaaacattcccccatccaaa 27804273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 25889176 - 25889243
Alignment:
Q  21 ggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaa 89  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  25889176 ggaatattttgaggtaat-taatgttttgaaggaattcaattattttgaggtggattcaaacaatagaa 25889243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 28745797 - 28745947
Alignment:
Q  3 atagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaaga 102  Q
    ||||||| ||||||||| |||||||||||||| ||||||||| |||||   |||||||||| ||| ||||| |||| |    | ||||||||||||||      
T  28745797 atagtgtatttggatgggggaatattttgagggaatgtaatggtttgagggaattcaatta-tttaaggtgaattctattgtttgaattcacctcaaaat 28745895  T
Q  103 agttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaa 154  Q
    |||||||||| ||||||| ||||||||| || |||||||||  |||||||||    
T  28745896 agttgaattccctcaaaatattacattcccttaaaatattctctcatccaaa 28745947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 8224852 - 8224762
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggt 168  Q
    |||||||| |||||||| |||||| | || ||||| ||||||||||||||||| ||||||| ||||| ||||||||| |||||||||||||    
T  8224852 caaacaatggaattcacatcaaagtatttcaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactcttagggt 8224762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 5474437 - 5474526
Alignment:
Q  41 aatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattc 130  Q
    ||||||||||   |||| ||||| ||||| ||| |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  5474437 aatgttttgagggaatttaattactttgaagtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattc 5474526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 302
Target Start/End: Complemental strand, 9383371 - 9383270
Alignment:
Q  201 gatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaatcaccctt 300  Q
    |||||||||||||||||| ||||| ||| |||    ||||||||||||||||||||| |||||| ||||||| |||||||||  ||||||| ||||||||    
T  9383371 gatatgataaaactatcacatcctgattaaatccattgtttggtgcaccaataggaacggataaattaaaccaatttctaatcttatcctactcaccctt 9383272  T
Q  301 tg 302  Q
    ||    
T  9383271 tg 9383270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 23536142 - 23536065
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    ||||||||||||||| |||||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||||||    
T  23536142 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 23536065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 160
Target Start/End: Original strand, 50005081 - 50005236
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||  |||||||||||||  |||||||||||||||   ||||||| |  ||||||||| |||| |    | |||| |||||||||  |     
T  50005081 agtgtgtttggatgacggaatattttgagagaatgtaatgttttgagcgaattcaacttctttgaggtgaattctattgtttgaatccacctcaaaataa 50005180  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 160  Q
    |||||||| ||||||||||||||||  |||||||||||||  |||||||| |||||    
T  50005181 ttgaattccctcaaaacattacattacctcaaaatattcctccatccaaacacact 50005236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 26501068 - 26501154
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    |||||||| |||||||| |||||| | |||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||||||    
T  26501068 caaacaatggaattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctta 26501154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 28632575 - 28632663
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttaggg 167  Q
    |||||||| ||||||||||||||| | |||||||| ||||||||||||||||| ||| ||| ||||| ||||||||| ||||| ||||||    
T  28632575 caaacaatggaattcacctcaaagta-ttgaattctctcaaaacattacattccctccaaacattccctcatccaaacacactattaggg 28632663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 164
Target Start/End: Complemental strand, 31166397 - 31166308
Alignment:
Q  75 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    ||||||||||||||||||| ||||||  | ||| ||||  ||||||||||||||| |||||||| ||||| ||||||||| |||||||||    
T  31166397 attcaaacaatagaattcatctcaaaatatttgcattccatcaaaacattacattatctcaaaacattccctcatccaaacacactctta 31166308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 24273209 - 24273293
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| ||||||||||||||| | |||||||| |||| |||||||||||| ||||||| |||||  |||||||| |||||||    
T  24273209 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 24273293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 167
Target Start/End: Original strand, 27935569 - 27935649
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttaggg 167  Q
    ||||||| ||||||| |||||||||  ||||||||||||||||| ||||||||||| |  |||||||| ||||||||||||    
T  27935569 gaattcaactcaaagtagttgaatttcctcaaaacattacattccctcaaaatatttctccatccaaacacactcttaggg 27935649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 160
Target Start/End: Original strand, 34756432 - 34756584
Alignment:
Q  8 gtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttg 107  Q
    |||||||||||| ||||| |||||||| |||||||||||||||   ||||||| || ||||||||| |||| |    | |||| |||||||||  | |||    
T  34756432 gtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattg 34756531  T
Q  108 aattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 160  Q
    ||||| |||||||||||| |||  ||||||||||| |  |||||||| |||||    
T  34756532 aattccctcaaaacattatattacctcaaaatatttccccatccaaacacact 34756584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 37448390 - 37448465
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaa 153  Q
    |||||||| |||||||| |||||| | || ||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  37448390 caaacaatggaattcacatcaaagtatttaaattccctcaaaacattacattctctcaaaacattccctcatccaa 37448465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 38277417 - 38277556
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||   ||||||||||||| ||||||||||||||||  ||||||| || ||||||||| |||  |    |  ||| |||||||||  |     
T  38277417 agtgtgtttggatgagagaatattttgagggaatgtaatgttttgaaggaattcaactactttgaggtgaattatattgtttaaatccacctcaaaataa 38277516  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattcc 144  Q
    |||||||| ||||||||||||||||  |||||||||||||    
T  38277517 ttgaattccctcaaaacattacattacctcaaaatattcc 38277556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 45565397 - 45565515
Alignment:
Q  6 gtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagt 105  Q
    |||||||||||||| ||||| |||||||  |||||||||||||||   ||||||| |||||| ||||| |||| |    |  |||||||||||||| |||    
T  45565397 gtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactattttaaggtgaattctattgtttaaattcacctcaaagtagt 45565496  T
Q  106 tgaattcgctcaaaacatt 124  Q
    ||||||| |||||||||||    
T  45565497 tgaattccctcaaaacatt 45565515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 264
Target Start/End: Original strand, 30209682 - 30209780
Alignment:
Q  162 ttagggtccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaagga 261  Q
    ||||||||||||||||||||||||||    |||||  ||| |||||||||| |||||||||||| || ||| || |||||||| ||||||||| ||| ||    
T  30209682 ttagggtccgtttggtgcacatgata----agaagtcagggtatgataaaattatcatatcctacttaaatctgttgtttggtacaccaatagaaaatga 30209777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 17502222 - 17502301
Alignment:
Q  45 ttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    |||||| | ||||||| || ||||||||| ||||||| ||||||||||| || |||| |||||||||| |||||||||||    
T  17502222 ttttgagagaattcaactactttgaggtgaattcaaataatagaattcaacttaaagtagttgaattccctcaaaacatt 17502301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 30190220 - 30190295
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||||||||||||  |||||||||  ||||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  30190220 gaattcacctcaaaatagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 30190295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 164 - 271
Target Start/End: Original strand, 4950129 - 4950232
Alignment:
Q  164 agggtccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggata 263  Q
    |||||| |||||||||||||||||    |||| ||| |||||||||||  |||| |||| |  || |||||||||||||||||| |||||| ||| ||||    
T  4950129 agggtcagtttggtgcacatgata----agaaaataagatatgataaacatatcctatcttgtttcaatttgatgtttggtgcatcaatagaaaatgata 4950224  T
Q  264 atttaaac 271  Q
    ||||||||    
T  4950225 atttaaac 4950232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 51847855 - 51847897
Alignment:
Q  6 gtgtgtttggatggaggaatattttgaggtaatgtaatgtttt 48  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  51847855 gtgtgtttggatggaggaatgttttgaggtaatgtaatgtttt 51847897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 15245529 - 15245480
Alignment:
Q  75 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    |||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  15245529 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 15245480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 26501150 - 26501105
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||    
T  26501150 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 26501105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 168
Target Start/End: Original strand, 43622964 - 43623057
Alignment:
Q  75 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggt 168  Q
    ||||||| |||  |||||||||||||| | || ||||  |||||||||||||||||  |||||| |||||  |||||||| |||||||||||||    
T  43622964 attcaaataatgaaattcacctcaaagtatttaaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactcttagggt 43623057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 47165201 - 47165285
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| |||||||||| |||| | |||||||| ||||||||||||||||  ||||||| ||| |  |||||||| |||||||    
T  47165201 caaacaatggaattcaccttaaagtatttgaattccctcaaaacattacatttcctcaaaacatttctccatccaaacacactct 47165285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 37036940 - 37037019
Alignment:
Q  80 aacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacac 159  Q
    |||||| ||||| || |||||  | |||||||| ||||||||||||||||| ||||||| ||||| ||||||||| ||||    
T  37036940 aacaatggaatttacatcaaaatatttgaattccctcaaaacattacattcactcaaaacattccctcatccaaacacac 37037019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 278
Target Start/End: Original strand, 49236136 - 49236215
Alignment:
Q  199 aggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttc 278  Q
    ||||||||||| || ||||||||||| ||  ||| |  |||||||||||||||||| ||||||||| |||||| ||||||    
T  49236136 aggatatgatacaattatcatatcctgatgaaatctattgtttggtgcaccaatagaaaaggataaattaaacatatttc 49236215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 144
Target Start/End: Original strand, 37447891 - 37447957
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattcc 144  Q
    |||||||| ||||||||||||| | | ||||||||  |||||||||||||||| ||| |||||||||    
T  37447891 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctccaaatattcc 37447957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 6470757 - 6470684
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    ||||||||||||||| ||||| |||||||  |||||||||||||||   ||||||| |  ||||||||||||||    
T  6470757 agtgtgtttggatggcggaatgttttgagagaatgtaatgttttgagggaattcaaattctttgaggtggattc 6470684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 24273291 - 24273218
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    ||||||||||||||| ||||| |||||||| ||||||||||| |||   ||||||| || ||||||||| ||||    
T  24273291 agtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 24273218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 32288004 - 32287959
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||    
T  32288004 agtgtgtttggatggaggaaagttttgagggaatgtaatgttttga 32287959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 40264114 - 40264187
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 160  Q
    |||| |||||||||  | |||||||| ||||||||||||||||  |||||||||||||  |||||||| |||||    
T  40264114 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatattcccccatccaaacacact 40264187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 282
Target Start/End: Complemental strand, 42472149 - 42472056
Alignment:
Q  189 ataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaat 282  Q
    ||||||||| || ||||||||| ||| |||||||||| || |||  | ||||||||||| || ||||||| |||||  |||||||||| |||||    
T  42472149 ataagaagacagaatatgataacactgtcatatcctacttaaatccgttgtttggtgcatcagtaggaaatgataaaataaacctattactaat 42472056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 44570762 - 44570697
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattc 143  Q
    |||||||| ||||||||||||| | | ||||||||  |||||||||||||||| ||||||| ||||    
T  44570762 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattc 44570697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 47165283 - 47165238
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  47165283 agtgtgtttggatggagaaatgttttgaggaaatgtaatgttttga 47165238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 29446828 - 29446745
Alignment:
Q  83 aatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttaggg 167  Q
    |||||||||||||| ||| | ||||||||| |||||||||||||||||  |||||| |||||  | | |||| ||||||||||||    
T  29446828 aatagaattcaccttaaata-gttgaattccctcaaaacattacattccttcaaaacattcccccgttcaaacacactcttaggg 29446745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 43623049 - 43622981
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtg 73  Q
    ||||||||||||||| ||||| |||||| | ||||||||||||||| | |||| || || |||||||||    
T  43623049 agtgtgtttggatgggggaatgttttgatggaatgtaatgttttgagaaaatttaaatactttgaggtg 43622981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 28632658 - 28632584
Alignment:
Q  3 atagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    ||||||||||||||||  ||||| ||| |||| ||||||||||||||| | ||||||| || ||||||||| ||||    
T  28632658 atagtgtgtttggatgagggaatgtttggagggaatgtaatgttttgagagaattcaa-tactttgaggtgaattc 28632584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 31195468 - 31195531
Alignment:
Q  15 gatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    |||||||||||||||||||| ||||||||||| |||   |||| || |||||||||||| ||||    
T  31195468 gatggaggaatattttgagggaatgtaatgttctgaggaaatttaaatattttgaggtgaattc 31195531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 49659300 - 49659214
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    |||||||| ||||||||||||||| | || ||||| |||  |||||||||||| ||||| | |||||  |||||||| ||||||||||    
T  49659300 caaacaatggaattcacctcaaagtatttaaattccctcgtaacattacattccctcaatacattcc-ccatccaaacacactcttag 49659214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 165
Target Start/End: Complemental strand, 17502233 - 17502195
Alignment:
Q  127 attctctcaaaatattccgtcatccaaagacactcttag 165  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  17502233 attctctcaaaatattccctcatccaaacacactcttag 17502195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 31195540 - 31195474
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattcc 144  Q
    |||||||| ||||||||||||||  | || ||||  |||| |||||||||||| |||||||||||||    
T  31195540 caaacaatggaattcacctcaaaatatttaaatttcctcagaacattacattccctcaaaatattcc 31195474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 32573006 - 32573072
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaa 153  Q
    |||| |||||||||  | |||||||| ||||||||||||||||  |||||||||||||  |||||||    
T  32573006 gaatccacctcaaaagaattgaattccctcaaaacattacattacctcaaaatattcccccatccaa 32573072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 32712876 - 32712774
Alignment:
Q  189 ataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatc 288  Q
    |||| |||| ||||||| |||| |||||||||||| | || |||||   |||||||||| || ||||||||||| |  |||||||||| || || |||||    
T  32712876 ataaaaagacaggatataataacactatcatatcccacttaaatttttcgtttggtgcatcattaggaaaggatcaaataaacctattacttatcctatc 32712777  T
Q  289 cta 291  Q
    |||    
T  32712776 cta 32712774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 8224770 - 8224815
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||  ||||| |||||||| |||||||||||||||    
T  8224770 agtgtgtttggatgagggaatgttttgagggaatgtaatgttttga 8224815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 12855407 - 12855317
Alignment:
Q  169 ccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggata 263  Q
    |||||||||||||||||||    || ||| |||||||||||  | |||||||||||| || |||    |||||| ||||||||||||||||||||    
T  12855407 ccgtttggtgcacatgata----aggagacaggatatgatatcattatcatatcctatttaaatccattgtttgatgcaccaataggaaaggata 12855317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 31166312 - 31166357
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||  ||||| ||||||| ||||||||||||||||    
T  31166312 agtgtgtttggatgagggaatgttttgagataatgtaatgttttga 31166357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 32287934 - 32288007
Alignment:
Q  90 ttcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctt 163  Q
    ||||| |||||| | |||||||  ||||||||||||||||| |||||||  ||||  |||||||| ||||||||    
T  32287934 ttcacttcaaagtatttgaatttcctcaaaacattacattccctcaaaactttcctccatccaaacacactctt 32288007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 44410313 - 44410473
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaaga-a 103  Q
    ||||| |||||||||  |||| |||||||| ||||||||||||| |   ||||||| |||||||||||| |||| |      |||| ||| ||||| | |    
T  44410313 agtgtatttggatgggagaatgttttgagggaatgtaatgttttaagcgaattcaactattttgaggtgaattctattgtctgaatccac-tcaaaaata 44410411  T
Q  104 gttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
     |||||||| |||||||| |||||||  |||||||||||||   ||||||| ||||||||||    
T  44410412 attgaattccctcaaaactttacattacctcaaaatattccccaatccaaacacactcttag 44410473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 615037 - 614929
Alignment:
Q  194 aagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaat 293  Q
    ||||||||| ||||||||||||| ||||| | ||||||| |  | ||||||||| ||| |  ||| ||||| ||||||  |||||||||  ||| ||| |    
T  615037 aagataggacatgataaaactattatatcatcatttaatcttttatttggtgcatcaacataaaatgataaattaaactaatttctaatcttattctact 614938  T
Q  294 caccctttg 302  Q
    |||||||||    
T  614937 caccctttg 614929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 37447968 - 37447900
Alignment:
Q  10 gtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    |||||||| | ||||||||| |||| ||||||||||||||||  ||||||| ||  |||||||| ||||    
T  37447968 gtttggataggggaatatttggagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattc 37447900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 276
Target Start/End: Original strand, 49287979 - 49288043
Alignment:
Q  212 actatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatt 276  Q
    |||||||||||||| || |||||| | |||||||||||||||  ||| |||||  ||||||||||    
T  49287979 actatcatatcctatttaaatttgttatttggtgcaccaatacaaaatgataaaataaacctatt 49288043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 3e-60; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 10127974 - 10128139
Alignment:
Q  3 atagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaaga 102  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||     
T  10127974 atagtgtgtttggatgggggaatattttgaagtaatgtaatgttttgaaggaattcaattattttgaggtggattcaaacaatagaattcatctcaaagt 10128073  T
Q  103 agttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggt 168  Q
    |||||||||| ||||||||||||||||||||||||| |||||  |||||||| ||||||| |||||    
T  10128074 agttgaattccctcaaaacattacattctctcaaaacattcccccatccaaatacactctaagggt 10128139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 15660185 - 15660342
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||   ||||||||||||||||| |||||||||||||||||||||| ||||||| ||    
T  15660185 agtgtgtttggataggggaatattttgaggtaatgtaatgttttgagggaattcaattattttgagatggattcaaacaatagaattcagctcaaagtag 15660284  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| ||||||||||||||||| ||||||| ||||| ||||||||| |||||||    
T  15660285 ttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 15660342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 42844704 - 42844561
Alignment:
Q  1 ttatagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaa 100  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||   || ||||||||||||| ||||||||||||||||||||||||||||||    
T  42844704 ttatagtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaaatcaattattttgaagtggattcaaacaatagaattcacctcaaa 42844605  T
Q  101 gaagttgaattcgctcaaaacattacattctctcaaaatattcc 144  Q
    | ||||||||||  |||||| ||||||||| ||||||| |||||    
T  42844604 gtagttgaattccttcaaaatattacattccctcaaaacattcc 42844561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 26250909 - 26251030
Alignment:
Q  3 atagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaaga 102  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||||||||||     
T  26250909 atagtgtgtttggatgagggaatattttgaggtaatgtaatgttttgaggaaattcaattattttgaggtggattcaaataatagaattcacctcaaagt 26251008  T
Q  103 agttgaattcgctcaaaacatt 124  Q
    |||||||||| |||||||||||    
T  26251009 agttgaattccctcaaaacatt 26251030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 41498647 - 41498489
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||| ||| |||||||||||||||||| ||||  |    
T  41498647 agtgtgtttggatggaggaatattttgagggaatgtaatgttttgaaggaattcaattattttgaggtgaatttaaacaatagaattcaccttaaagtgg 41498548  T
Q  105 ttgaattcgctc-aaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| ||| |||||||||  ||||||||||| | |||  |||||||| |||||||    
T  41498547 ttgaattccctcaaaaacattattttctctcaaaacaatcccccatccaaacacactct 41498489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 857396 - 857266
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| | ||| |||||||| |||||||||||||||   ||||||| || |||||| || |||||||||||||||||||||| |||| ||    
T  857396 agtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtag 857297  T
Q  105 ttgaattcgctcaaaacattacattctctca 135  Q
    |||||||| ||||||||||||||||| ||||    
T  857296 ttgaattccctcaaaacattacattccctca 857266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 154
Target Start/End: Complemental strand, 28846028 - 28845879
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| | ||| |||||||| ||| |||||||||||   ||||||| || |||||| || |||||||||||||||||||||| |||| ||    
T  28846028 agtgtgtttggatggggaaatgttttgagggaatataatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtag 28845929  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaa 154  Q
    |||||||| ||| ||||||||||||| ||||||| |||||  ||||||||    
T  28845928 ttgaattccctcgaaacattacattccctcaaaacattcctccatccaaa 28845879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 1107053 - 1107211
Alignment:
Q  5 agtgtgtttggatggaggaa--tattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaaga 102  Q
    |||||||||||||| |||||  | |||| ||| ||||||||||||||||  ||||||| || |||||| || |||||||||||||||||||||| | ||     
T  1107053 agtgtgtttggatg-aggaaatttttttaagggaatgtaatgttttgaaggaattcaactactttgagatgaattcaaacaatagaattcaccttagagt 1107151  T
Q  103 agttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||||| |||||||||||| |||| |||||||||||||  |||||||| |||||||    
T  1107152 agttgaattccctcaaaacattatattccctcaaaatattcccccatccaaatacactct 1107211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 160
Target Start/End: Complemental strand, 7352969 - 7352814
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| | ||| |||||||| |||||||||||||||   ||||||| || |||||  || |||||||||||||||||||||| |||  ||    
T  7352969 agtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgaattgaattcaaacaatagaattcaccttaaaatag 7352870  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 160  Q
    ||||||||  |||||||||||||||| ||||||| |||||  |||||||| |||||    
T  7352869 ttgaattccatcaaaacattacattccctcaaaacattcccccatccaaacacact 7352814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 11040970 - 11041088
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||| | ||||||| || ||||||||| || ||||||||||||||||||  |||| ||    
T  11040970 agtgtgtttggatgg-ggaatattttgagggaatgtaatgttttgagagaattcaactactttgaggtgaatccaaacaatagaattcaccataaagtag 11041068  T
Q  105 ttgaattcgctcaaaacatt 124  Q
    |||||||| |||||||||||    
T  11041069 ttgaattccctcaaaacatt 11041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 5 - 166
Target Start/End: Original strand, 7352814 - 7352975
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||   ||||||| |||||| ||||| |||| |    | |||||||  |||||| ||    
T  7352814 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgatggaattcaactattttaaggtgaattctattgtttgaattcaattcaaagtag 7352913  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 166  Q
    |||||||| ||||||||||||||||| ||||||| ||| |  |||||||| |||||||||||    
T  7352914 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactcttagg 7352975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 4896650 - 4896794
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||   |||||||||||||||||                ||||||||||||||| ||    
T  4896650 agtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattattttgag----------------gaattcacctcaaagtag 4896733  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    |||||||| ||||||||||||||||| ||||||||||| |  |||||||| ||||| ||||    
T  4896734 ttgaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactattag 4896794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 65 - 162
Target Start/End: Complemental strand, 36456004 - 36455907
Alignment:
Q  65 tttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||||||| |||||||||||||||||||||| |||| |||||||||| |||||||||||| |||| ||||||| |||||  |||||||| |||||||    
T  36456004 tttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattagattccctcaaaacattcccccatccaaacacactct 36455907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 49111469 - 49111372
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaaga 102  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||   ||||||| |||||||||||| |||||||||||||||||| ||| |||||    
T  49111469 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactattttgaggtgaattcaaacaatagaattccccttaaaga 49111372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 162
Target Start/End: Original strand, 28845876 - 28846030
Alignment:
Q  8 gtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttg 107  Q
    |||||||||||||||||| |||||||| |||||||||||| ||   ||||||| || ||| ||||| |||| |    | ||||||| ||||||| |||||    
T  28845876 gtgtttggatggaggaatgttttgagggaatgtaatgtttcgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttg 28845975  T
Q  108 aattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||| |||||||||||| |||| ||||||| ||| |  |||||||| |||||||    
T  28845976 aattccctcaaaacattatattccctcaaaacatttccccatccaaacacactct 28846030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 54 - 162
Target Start/End: Complemental strand, 14982387 - 14982280
Alignment:
Q  54 aattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaa 153  Q
    ||||||| || ||||||||| ||||||| |||| ||||||||| |||| |||| ||||| ||||||||||||||||| ||||||| |||||  |||||||    
T  14982387 aattcaactactttgaggtgaattcaaa-aataaaattcaccttaaagtagttaaattccctcaaaacattacattccctcaaaacattcctccatccaa 14982289  T
Q  154 agacactct 162  Q
    | |||||||    
T  14982288 acacactct 14982280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 31742777 - 31742845
Alignment:
Q  4 tagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggt 72  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||   |||||||||||||||||||    
T  31742777 tagtgtgtttggatggaggaatattttaaggtagtgtaatgttttgagggaattcaattattttgaggt 31742845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 164 - 291
Target Start/End: Complemental strand, 45413947 - 45413824
Alignment:
Q  164 agggtccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggata 263  Q
    |||||||||||||||||| |||||     | ||| |||||| |||| |||||||||||| | ||| |||  | |||||||||||||||||||||||||||    
T  45413947 agggtccgtttggtgcacttgatag----ggagacaggataggatagaactatcatatcttgattcaatcggttgtttggtgcaccaataggaaaggata 45413852  T
Q  264 atttaaacctatttctaattctatccta 291  Q
    | |||||||||||||  || ||||||||    
T  45413851 aattaaacctatttcctatcctatccta 45413824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 11041040 - 11040968
Alignment:
Q  89 attcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||  |||||||| |||||||    
T  11041040 attcacctcaaagtagttgaattctctcaaaacattacattccctcaaaatattcc-ccatccaaacacactct 11040968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 302
Target Start/End: Original strand, 33451294 - 33451395
Alignment:
Q  201 gatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaatcaccctt 300  Q
    ||||||||||||||||| ||||||| || |||| | ||||||||||||||||| || | |||||  |||||||||| ||| |||||||||| ||| ||||    
T  33451294 gatatgataaaactatcgtatcctacttaaattcgttgtttggtgcaccaatatgatatgataaaataaacctattactacttctatcctattcatcctt 33451393  T
Q  301 tg 302  Q
    ||    
T  33451394 tg 33451395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 2125941 - 2125857
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| ||||||||| ||||| | |||||||| ||||||||| ||||||| |||||||||||||  |||||||| |||||||    
T  2125941 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaatattcccccatccaaacacactct 2125857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 15660340 - 15660180
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||  ||||| |||||||| |||||||||||||||   ||||||| || |||||| || |||| |    | |||| || ||||||  |     
T  15660340 agtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagctgaattctattgtttgaatccatctcaaaataa 15660241  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    |||||||| ||||||||||||||||  |||||||||||||   ||||||| ||||||||||    
T  15660240 ttgaattccctcaaaacattacattacctcaaaatattcccctatccaaacacactcttag 15660180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 31473933 - 31473849
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||||||| |||||||||||||| | |||||||| |||| |||||||||||| ||||||| |||||  |||||||| |||||||    
T  31473933 caaacaataaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 31473849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 36625667 - 36625579
Alignment:
Q  214 tatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaatcaccctttg 302  Q
    |||||||||||| || |||||| |||||||||||| ||||||| | ||||| ||||||||||| | ||| |||||||| ||||||||||    
T  36625667 tatcatatcctatttaaatttgttgtttggtgcactaataggatatgataaattaaacctattacgaatcctatcctattcaccctttg 36625579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 49111396 - 49111471
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||||||||||||  |||||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  49111396 gaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 49111471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 166
Target Start/End: Complemental strand, 1107209 - 1107047
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||| ||||||||| |||||||||||||| ||| |||||||||||   ||||||| || | | ||||| |||| |    | ||||||| ||||||| ||    
T  1107209 agtgtatttggatgggggaatattttgagggaatataatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcatctcaaagtag 1107110  T
Q  105 ttgaattcgctcaaaacattacattctc-tcaaaatattccgtcatccaaagacactcttagg 166  Q
    ||||||||  |||||||||||||||| | | |||| ||| | ||||||||| |||||||||||    
T  1107109 ttgaattccttcaaaacattacattcccttaaaaaaatttcctcatccaaacacactcttagg 1107047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 166
Target Start/End: Complemental strand, 1112679 - 1112601
Alignment:
Q  88 aattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 166  Q
    |||||||||||||| |||||||||| ||| ||||||||||||  ||||||| |||||  |||||||| |||||||||||    
T  1112679 aattcacctcaaagtagttgaattccctcgaaacattacatttcctcaaaacattcccccatccaaacacactcttagg 1112601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 1539725 - 1539647
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaaga 156  Q
    ||||||||  |||||||||||||| | |||||||| ||||||||||||||||| ||||||| |||||  ||||||||||    
T  1539725 caaacaatgaaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaaga 1539647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 26251030 - 26250901
Alignment:
Q  41 aatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 140  Q
    ||||||||||   ||||||| || ||||||||| |||| |  | | |||| |||||||||  | |||||||  ||||||||||||||||  |||||||||    
T  26251030 aatgttttgagggaattcaactactttgaggtgaattctattatttgaatccacctcaaaataattgaatttcctcaaaacattacattacctcaaaata 26250931  T
Q  141 ttccgtcatccaaagacactcttagggtcc 170  Q
    |||| ||||||||| ||||| |||||||||    
T  26250930 ttccctcatccaaacacactattagggtcc 26250901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 36456007 - 36456088
Alignment:
Q  84 atagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    ||||||||||||| |||| |||||||||  ||||||| ||||||||| ||||||| |||||  |||||||| ||||||||||    
T  36456007 atagaattcaccttaaagtagttgaatttcctcaaaatattacattccctcaaaacattcctccatccaaacacactcttag 36456088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 162
Target Start/End: Original strand, 857266 - 857398
Alignment:
Q  30 tgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacatt 129  Q
    ||||| |||||||||||||||   ||||||| || ||| ||||| |||| |    | ||||||| ||||||| |||||||||| ||||||||||||||||    
T  857266 tgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacatt 857365  T
Q  130 ctctcaaaatattccgtcatccaaagacactct 162  Q
    | ||||||| ||| |  |||||||| |||||||    
T  857366 ccctcaaaacatttccccatccaaacacactct 857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 4441449 - 4441338
Alignment:
Q  41 aatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 140  Q
    ||||||||||   ||||||| || ||||||||| ||||||||||||||||||||         ||||||||| ||||||||||||||||| ||||||| |    
T  4441449 aatgttttgaggaaattcaactactttgaggtgaattcaaacaatagaattcac---------gttgaattccctcaaaacattacattccctcaaaaca 4441359  T
Q  141 ttccgtcatccaaagacactc 161  Q
    ||||  |||||||| ||||||    
T  4441358 ttccaccatccaaacacactc 4441338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 41498575 - 41498651
Alignment:
Q  88 aattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    |||||||||||||  | ||||||||  |||||||||||||||| |||||||||||||  |||||||| |||||||||    
T  41498575 aattcacctcaaaataattgaattccttcaaaacattacattccctcaaaatattcctccatccaaacacactctta 41498651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 4896791 - 4896716
Alignment:
Q  3 atagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    ||||||||||||||||| | |||||||||||| |||||||||||||||   ||||||| || ||||||||| ||||    
T  4896791 atagtgtgtttggatggggaaatattttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 4896716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 301
Target Start/End: Complemental strand, 19181588 - 19181457
Alignment:
Q  166 ggtccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataat 265  Q
    |||||||||||||||||||||| | |    || | |||||||||||| |||| |||||| ||  ||| |  ||||||||||||||| | || | |||||     
T  19181588 ggtccgtttggtgcacatgatagaga----gacatgatatgataaaattatcctatcctgatccaatctattgtttggtgcaccaacatgatatgataaa 19181493  T
Q  266 ttaaacctatttctaattctatcctaatcacccttt 301  Q
    ||||||||||||||||| |||||||| ||| |||||    
T  19181492 ttaaacctatttctaatcctatcctactcatccttt 19181457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 42964602 - 42964500
Alignment:
Q  189 ataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatc 288  Q
    ||||| ||| ||||||||||||||||||| ||||||  |  |||  | | |||| ||||||||||||||||||||||||||||| ||| || || |||||    
T  42964602 ataagcagacaggatatgataaaactatcctatcctgctgaaatccggtatttgttgcaccaataggaaaggataatttaaacccattacttatcctatc 42964503  T
Q  289 cta 291  Q
    |||    
T  42964502 cta 42964500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 5715815 - 5715738
Alignment:
Q  91 tcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggt 168  Q
    |||| |||||| | |||||||  |||||||||||||||| |||||||| ||||| ||||||||| ||||||| |||||    
T  5715815 tcacatcaaagtatttgaattacctcaaaacattacattatctcaaaacattccctcatccaaacacactctaagggt 5715738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 10633116 - 10633035
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacac 159  Q
    ||||||||  |||||||||||||| | |||||||| |||| |||||||||||| ||||||| |||||  |||||||| ||||    
T  10633116 caaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacac 10633035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 14982282 - 14982327
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||    
T  14982282 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 14982327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 29091221 - 29091164
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctca 135  Q
    ||||||||||||||||| |||||| | |||||||| ||||||||||||||||| ||||    
T  29091221 caaacaatagaattcacatcaaagtatttgaattccctcaaaacattacattccctca 29091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 31742921 - 31742876
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||    
T  31742921 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 31742876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 46724232 - 46724195
Alignment:
Q  54 aattcaattattttgaggtggattcaaacaatagaatt 91  Q
    ||||||||||||||||||||||||||||||||||||||    
T  46724232 aattcaattattttgaggtggattcaaacaatagaatt 46724195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 34666341 - 34666470
Alignment:
Q  162 ttagggtccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcacca----ataggaa 257  Q
    ||||||||||||||||||||| |    ||||||||| || |||||||| |||||||||||| |  || |||  | ||||||||||| ||    |||||||    
T  34666341 ttagggtccgtttggtgcacagg----ataagaagacagaatatgatacaactatcatatcttgcttcaatacgttgtttggtgcagcaatatataggaa 34666436  T
Q  258 aggataatttaaacctatttctaattctatccta 291  Q
    | ||||| |||||||||||||||||  |||||||    
T  34666437 atgataacttaaacctatttctaatcatatccta 34666470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 1539649 - 1539711
Alignment:
Q  11 tttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtg 73  Q
    ||||||||||||||| |||||||| |||||||||||||||   ||||||| || |||||||||    
T  1539649 tttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgaggtg 1539711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 4896705 - 4896643
Alignment:
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttaggg 167  Q
    |||||||| ||||||||||||||||  |||||||||||||  |||||||| ||||||| ||||    
T  4896705 ttgaattccctcaaaacattacattacctcaaaatattcccccatccaaacacactctaaggg 4896643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 42543025 - 42542979
Alignment:
Q  4 tagtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||||    
T  42543025 tagtgtgtttggatggtggaatgttttgagggaatgtaatgttttga 42542979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 291
Target Start/End: Complemental strand, 55945760 - 55945706
Alignment:
Q  237 tgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 291  Q
    |||||||||||||||||||||||||||| |  || ||||||||||| ||||||||    
T  55945760 tgtttggtgcaccaataggaaaggataaatccaatctatttctaatcctatccta 55945706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 1112704 - 1112757
Alignment:
Q  85 tagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaa 138  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||  |||||||    
T  1112704 tagaattcacctcaaagtagttgaattccctcgaaacattacatttgctcaaaa 1112757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 2125859 - 2125904
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||| |||||||||||||| |||||| ||||||||    
T  2125859 agtgtgtttggatgggggaatattttgagggaatgtattgttttga 2125904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 2183295 - 2183356
Alignment:
Q  230 aatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 291  Q
    |||||| |||||||||||||||||| ||||||||| ||||||  ||||| ||| ||||||||    
T  2183295 aatttgttgtttggtgcaccaatagaaaaggataaattaaactcatttccaatcctatccta 2183356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 4441339 - 4441384
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||    
T  4441339 agtgtgtttggatggtggaatgttttgagggaatgtaatgttttga 4441384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 162
Target Start/End: Original strand, 11348327 - 11348396
Alignment:
Q  93 acctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||||  ||||||||| ||||||||||||||||| || |||| |||||  |||||||| |||||||    
T  11348327 acctcaaagttgttgaattccctcaaaacattacattcccttaaaacattcccccatccaaatacactct 11348396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 36456083 - 36456038
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||||    
T  36456083 agtgtgtttggatggaggaatgttttgagggaatgtaatattttga 36456038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 1112607 - 1112675
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtg 73  Q
    ||||||||||||||| ||||| |||||||| |||||||||||| ||   ||||||| || |||||||||    
T  1112607 agtgtgtttggatgggggaatgttttgaggaaatgtaatgtttcgagggaattcaactactttgaggtg 1112675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 5715746 - 5715810
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttga 69  Q
    ||||||||||||||  ||||| ||||||| ||||||||||||||||  |||||||| || |||||    
T  5715746 agtgtgtttggatgagggaatgttttgagataatgtaatgttttgaggtaattcaaatactttga 5715810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 26534577 - 26534525
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattc 130  Q
    |||||||||||||||||  ||||| | |||||||| |||||||||||||||||    
T  26534577 caaacaatagaattcacaacaaagtatttgaattccctcaaaacattacattc 26534525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 31473851 - 31473919
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtg 73  Q
    ||||||||||||||| ||||| |||||||| ||||||||||| |||   ||||||| || |||||||||    
T  31473851 agtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtg 31473919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 10633035 - 10633102
Alignment:
Q  6 gtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtg 73  Q
    |||||||||||||| ||||| |||||||| ||||||||||| |||   ||||||| || |||||||||    
T  10633035 gtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtg 10633102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 12914060 - 12914119
Alignment:
Q  65 tttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    ||||||||| |||||||||||| |||||| || |||  |||||||||| |||||||||||    
T  12914060 tttgaggtgaattcaaacaataaaattcatcttaaaatagttgaattccctcaaaacatt 12914119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 16300209 - 16300260
Alignment:
Q  79 aaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattc 130  Q
    ||||||| ||||||||||||||| | |||||||  |||||||||||||||||    
T  16300209 aaacaatggaattcacctcaaagtatttgaattttctcaaaacattacattc 16300260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 19461809 - 19461762
Alignment:
Q  3 atagtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||| ||||||||| | |||||||||| |||||||||||||||||    
T  19461809 atagtgtttttggatggggaaatattttgaagtaatgtaatgttttga 19461762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 41139557 - 41139506
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacatt 129  Q
    ||||||||||||||||||| |||| | |||||||  ||||||||||||||||    
T  41139557 caaacaatagaattcacctaaaagtatttgaatttcctcaaaacattacatt 41139506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 16516173 - 16516219
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaa 51  Q
    ||||||||||||||| ||||| |||||| | ||||||||||||||||    
T  16516173 agtgtgtttggatgggggaatgttttgacggaatgtaatgttttgaa 16516219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 19461725 - 19461807
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 160  Q
    |||||||||||||| |  |||||  | |||||||||||||||||||||||||   |||||||||| |  |||||||| |||||    
T  19461725 caaacaatagaatttatatcaaattatttgaattcgctcaaaacattacattacttcaaaatatttccccatccaaaaacact 19461807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 42775689 - 42775643
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    |||||||| ||||||||||||||| | |||||||| |||||||||||    
T  42775689 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 42775643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 9451199 - 9451158
Alignment:
Q  9 tgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    |||||||||| |||||| |||| |||||||||||||||||||    
T  9451199 tgtttggatgaaggaatgttttaaggtaatgtaatgttttga 9451158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 10354344 - 10354417
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    ||||||||| |||  | |||| |||||||||||||||||||||||| | |||| || ||||| |||||| ||||    
T  10354344 agtgtgtttagataaatgaatgttttgaggtaatgtaatgttttgagaaaattgaaatatttggaggtgaattc 10354417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 31742875 - 31742924
Alignment:
Q  114 ctcaaaacattacattctctcaaaatattccgtcatccaaagacactctt 163  Q
    ||||||||||||||||| ||||||| |||||  |||||||| ||||||||    
T  31742875 ctcaaaacattacattccctcaaaacattcctccatccaaacacactctt 31742924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 36455909 - 36455954
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||    
T  36455909 agtgtgtttggatgggggaatgttttgagggaatctaatgttttga 36455954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 42776639 - 42776684
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    |||||||||||||||| |||| |||| |||| ||||||||||||||    
T  42776639 agtgtgtttggatggaagaatgtttttaggttatgtaatgttttga 42776684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 43481412 - 43481367
Alignment:
Q  237 tgtttggtgcaccaataggaaaggataatttaaacctatttctaat 282  Q
    ||||||||||||||||| |||||||||| ||||||  |||||||||    
T  43481412 tgtttggtgcaccaataagaaaggataaattaaactcatttctaat 43481367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 16516255 - 16516171
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| || ||||| |||||| | || |||||  ||||||||||||||||  |||||| |||||  |||||||| |||||||    
T  16516255 caaacaatggagttcacatcaaagtatttaaattccttcaaaacattacattccgtcaaaacattcccccatccaaacacactct 16516171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 3e-54; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 29065976 - 29065817
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  29065976 agtgtgtttggatggaggaatgttttaaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtag 29065877  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    |||||||| ||||||||||||||||| ||||||| ||||   |||||||| |||||||||    
T  29065876 ttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactctta 29065817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 5644834 - 5644674
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||||   ||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  5644834 agtgtgtttggatgggggaacgttttgaggtaatgtaatgttttgagggaattcaattattttgaggtgggttcaaacaatagaattcacctcaaagtag 5644735  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    |||||||| ||||||||||||||||| ||||||| |||||  ||| |||| ||||||||||    
T  5644734 ttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactcttag 5644674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 46069549 - 46069423
Alignment:
Q  1 ttatagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaa 100  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||  ||   ||||||||||||||||| |||||||||||||||||||||||||||||    
T  46069549 ttatagtgtgtttggatgggggaatattt-gaggtaatgtaatgtt--gagggaattcaattattttgagatggattcaaacaatagaattcacctcaaa 46069453  T
Q  101 gaagttgaattcgctcaaaacattacattc 130  Q
    | |||||||||| |||||||||||||||||    
T  46069452 gtagttgaattccctcaaaacattacattc 46069423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 21635887 - 21636020
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    |||||| ||||||||  |||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  21635887 agtgtgcttggatgggagaatattttgaggtaatgtaatgttttgaggggattcaattattttgaggtggattcaaacaatagaattcatctcaaagtag 21635986  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaa 138  Q
    || |||||  |||||||||||||||| |||||||    
T  21635987 ttaaattccttcaaaacattacattccctcaaaa 21636020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 40110895 - 40110735
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaa-caatagaattcacctcaaagaa 103  Q
    ||||||||||||||| | ||| ||| |||| |||||||||||||||   ||||||| || ||||||||| ||||||| ||||||||||||||| |||| |    
T  40110895 agtgtgtttggatggggaaatgtttcgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcaccttaaagta 40110796  T
Q  104 gttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    ||||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||||||    
T  40110795 gttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 40110735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 2057397 - 2057554
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| ||||| |||||||  |||||||||||||||   ||||||| || |||||||||  ||||||||||| |||||||||  ||| ||    
T  2057397 agtgtgtttggatgggggaatgttttgagcgaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaataaaattcaccttgaagtag 2057496  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| ||||||||||||| ||| |||||||||||||  |||||||| |||||||    
T  2057497 ttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 2057554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 43955675 - 43955514
Alignment:
Q  1 ttatagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaa 100  Q
    ||||||||||||||||||| ||||| |||||||| |||||||||||||||   ||||||| || ||| ||||| |||| ||   ||||||||| || |||    
T  43955675 ttatagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgcattctaa---tagaattcatcttaaa 43955579  T
Q  101 gaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    | |||||||||| ||||||||||||||||| ||||||| |||||  |||||||| ||||||||||    
T  43955578 gtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcttag 43955514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 44915197 - 44915322
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||   |||| |||||||| || |||||||||||||  ||||||| || ||||||||| |||||||||||||||||||||| | || ||    
T  44915197 agtgtgtttggatgagagaattttttgagggaacgtaatgttttgaaggaattcaactactttgaggtgaattcaaacaatagaattcaccttagagtag 44915296  T
Q  105 ttgaattcgctcaaaacattacattc 130  Q
    |||||||| |||||||||||| ||||    
T  44915297 ttgaattccctcaaaacattaaattc 44915322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 34388422 - 34388262
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    |||||||||| |||  ||||| |||||||| |||||||| ||||||   ||||||| || |||||||||  |||||||||| |||||||||| |||| ||    
T  34388422 agtgtgtttgaatgatggaatgttttgagggaatgtaatattttgagggaattcaactactttgaggtgagttcaaacaatggaattcaccttaaagtag 34388323  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    |||||||| |||| |||||||| ||  ||||||||||| |  |||||||| ||||||||||    
T  34388322 ttgaattctctcagaacattacttttcctcaaaatatttccccatccaaacacactcttag 34388262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 23319094 - 23318992
Alignment:
Q  189 ataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatc 288  Q
    ||||||||| |||||||||||| ||||||||||||| ||| ||| || |||||||| |||||| | ||||||||||||||||||||||| |||| |||||    
T  23319094 ataagaagacaggatatgataacactatcatatcctgattaaatctgttgtttggtccaccaacatgaaaggataatttaaacctatttttaatcctatc 23318995  T
Q  289 cta 291  Q
    |||    
T  23318994 cta 23318992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 39644867 - 39644976
Alignment:
Q  193 gaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaa 292  Q
    ||||| |||||||||||||||||||||||| || || |||||| |||||||||| ||||||| ||||||||| ||||||| |||| |||| ||||||||     
T  39644867 gaagacaggatatgataaaactatcatatcatatttcaatttgttgtttggtgcgccaatagaaaaggataacttaaacccatttataatcctatcctac 39644966  T
Q  293 tcaccctttg 302  Q
    ||| ||||||    
T  39644967 tcatcctttg 39644976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 49052788 - 49052912
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||    ||| |||||||| |||||||||||||||   ||||||| || |||||| || |||||||||||||||||||||| |||| ||    
T  49052788 agtgtgtttggatgagaaaatgttttgagg-aatgtaatgttttgagtgaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtag 49052886  T
Q  105 ttgaattcgctcaaaacattacattc 130  Q
    |||||||| |||||||||||||||||    
T  49052887 ttgaattccctcaaaacattacattc 49052912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 2057552 - 2057392
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| |||||||||||||| || ||||||||||||   ||||||| || ||  ||||| |||  |    | ||| ||||||||||| ||    
T  2057552 agtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactacttcaaggtgaattttattgtttgaactcacctcaaagtag 2057453  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    |||||||| ||||||||||||||||| ||||||| |||||  |||||||| ||||||||||    
T  2057452 ttgaattccctcaaaacattacattcgctcaaaacattcccccatccaaacacactcttag 2057392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 169 - 302
Target Start/End: Complemental strand, 41482592 - 41482463
Alignment:
Q  169 ccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataattta 268  Q
    |||||||||||||||||||     ||||| | |||| |||||||||||||| |||| |||||||  | ||||||||||||||| |||||||||||| |||    
T  41482592 ccgtttggtgcacatgatag----gaagacatgataggataaaactatcatctcctgatttaatgcgctgtttggtgcaccaacaggaaaggataactta 41482497  T
Q  269 aacctatttctaattctatcctaatcaccctttg 302  Q
    ||||||||| ||||  ||||||| ||||||||||    
T  41482496 aacctatttttaatcatatcctactcaccctttg 41482463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 167
Target Start/End: Original strand, 40110739 - 40110902
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaata-gaattcacctcaaagaa 103  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||   ||||||| || ||| ||||| |||| |    |  ||||||||||||||| |    
T  40110739 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgttttgaattcacctcaaagta 40110838  T
Q  104 gttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttaggg 167  Q
    ||||||||| ||||||||||||||||| ||| ||| ||| |  |||||||| ||||||||||||    
T  40110839 gttgaattccctcaaaacattacattccctcgaaacatttccccatccaaacacactcttaggg 40110902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 34388267 - 34388424
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| | |||||||||||| || |||||||| ||| | ||||||| || ||| ||||| |||| |    | ||| ||||||||||| ||    
T  34388267 agtgtgtttggatggggaaatattttgaggaaaagtaatgttctgagagaattcaactactttaaggtgaattccattgtttgaactcacctcaaagtag 34388366  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| ||||||| ||||||||| ||||||| ||||| |||| |||| |||||||    
T  34388367 ttgaattccctcaaaatattacattccctcaaaacattccatcattcaaacacactct 34388424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 160
Target Start/End: Original strand, 43955519 - 43955671
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||   ||||||| || ||| || || |||| |    |||||| ||||| |||| ||    
T  43955519 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaagatgaattctat---tagaatgcaccttaaagtag 43955615  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 160  Q
    |||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||    
T  43955616 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 43955671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 75 - 165
Target Start/End: Complemental strand, 31632809 - 31632719
Alignment:
Q  75 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    ||||||||||| ||||||||||||||| | |||||||| |||| |||||||||||| ||||||| |||||  |||||||| ||||||||||    
T  31632809 attcaaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactcttag 31632719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 29065821 - 29065978
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    |||||||||||||||| |||| |||||||| |||||||||||||||   ||||||| || ||||||||| |||| |    | |||| |||||||||  |     
T  29065821 agtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataa 29065920  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| ||||||||||||||||  || |||| |||||  |||||||| |||||||    
T  29065921 ttgaattccctcaaaacattacattaccttaaaacattcctccatccaaacacactct 29065978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 29195711 - 29195763
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataatt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29195711 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaagaatt 29195763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 40854127 - 40854007
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaat-aattcaattattttgaggtggattcaaacaatagaattcacctcaaagaa 103  Q
    ||||||||||||||| | ||| || ||||| |||||||| ||||||    ||||||| || |||||| || |||||||||||||||||||||| |||| |    
T  40854127 agtgtgtttggatggggaaatgttctgagggaatgtaatattttgaggggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagta 40854028  T
Q  104 gttgaattcgctcaaaacatt 124  Q
    ||||||||| |||||||||||    
T  40854027 gttgaattccctcaaaacatt 40854007  T

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Target: chr7; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 46482102 - 46481943
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    |||||||||| |||||| ||| | |||| | ||||||||||||||| | ||||||| || |||||| || ||||||||||||||||||| ||  ||  ||    
T  46482102 agtgtgtttgaatggagaaatgtgttgaaggaatgtaatgttttgagaaaattcaacta-tttgagttgaattcaaacaatagaattcatcttcaaatag 46482004  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    || ||||  |||||||||||||||||| || |||||||    |||||||| ||||||||||    
T  46482003 ttaaatttcctcaaaacattacattctttcgaaatattttcccatccaaacacactcttag 46481943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 165
Target Start/End: Original strand, 35776930 - 35777017
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    |||| ||| ||||||||||||||| | |||||||| |||| |||||||||||| ||||||| ||||| ||||||||| ||||||||||    
T  35776930 caaataatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattccctcatccaaacacactcttag 35777017  T

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Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 5644679 - 5644836
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||   ||||||| || ||||||||| |||| |    | |||  |||||||||  |     
T  5644679 agtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaacccacctcaaaataa 5644778  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| ||||||||||||||||  |||||||  ||||  |||||||| |||||||    
T  5644779 ttgaattccctcaaaacattacattacctcaaaacgttcccccatccaaacacactct 5644836  T

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Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 18789221 - 18789305
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| |||||||||| |||| | |||||||| |||| ||||||| ||||||||||||||||||  |||||||| |||||||    
T  18789221 caaacaatggaattcaccttaaagtatttgaattccctcataacattatattctctcaaaatattcctccatccaaacacactct 18789305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 26162112 - 26162196
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| ||||||||||||||| | |||||||| |||| |||||||||||| ||||||| |||||  |||||||| |||||||    
T  26162112 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 26162196  T

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Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 44915270 - 44915192
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    ||||||||||||||| ||||||||||  |||||||||||| ||| ||||||| ||||  ||||||||| ||||||||||    
T  44915270 gaattcacctcaaagtagttgaattccttcaaaacattacgttccctcaaaaaattctctcatccaaacacactcttag 44915192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 6498740 - 6498824
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| | |||||| |||||| | |||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  6498740 caaacaatggtattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 6498824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 39594604 - 39594687
Alignment:
Q  199 aggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaat 282  Q
    ||||||||||||||||||||||||||| || |||  | ||||||||||||||||| || | | ||| ||||||||||| |||||    
T  39594604 aggatatgataaaactatcatatcctacttaaatccgttgtttggtgcaccaataagatatgctaaattaaacctattactaat 39594687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 302
Target Start/End: Complemental strand, 2334133 - 2334029
Alignment:
Q  201 gatatgataaaactatcatatcctaa---tttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaatcacc 297  Q
    |||||||||| ||||||||||||| |   || |||  | ||||||||||||||||||||  |||||| |||||||||||| |||| |||||||| |||||    
T  2334133 gatatgataacactatcatatcctgaatattcaatccggtgtttggtgcaccaataggattggataacttaaacctatttttaatcctatcctattcacc 2334034  T
Q  298 ctttg 302  Q
     ||||    
T  2334033 ttttg 2334029  T

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Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 6498822 - 6498777
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||    
T  6498822 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 6498777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 24429661 - 24429762
Alignment:
Q  202 atatgataaaactatcat-atcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaatcaccctt 300  Q
    |||||||||||||||||| ||||| ||| | | || || ||| ||||||||||| ||| ||||||||||| |||||| |||| ||||| || ||||||||    
T  24429661 atatgataaaactatcattatcctgattcattctgctgcttgatgcaccaatagaaaatgataatttaaaactatttataatcctatcttactcaccctt 24429760  T
Q  301 tg 302  Q
    ||    
T  24429761 tg 24429762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 49052860 - 49052784
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||| ||||||| |||   ||||||||| |||||||||    
T  49052860 gaattcaactcaaagtagttgaattcactcaaaacattacattc-ctcaaaacattttctcatccaaacacactctta 49052784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 15990895 - 15990958
Alignment:
Q  7 tgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgag 70  Q
    ||||||||||| ||| ||||||||||||||||||||||| |||||  ||||||| || ||||||    
T  15990895 tgtgtttggattgagtaatattttgaggtaatgtaatgtcttgaaggaattcaaatactttgag 15990958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 34115708 - 34115649
Alignment:
Q  1 ttatagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaa 60  Q
    ||||| ||||||||||||||||||| ||||||| ||||  |||||||||| |||||||||    
T  34115708 ttatattgtgtttggatggaggaatgttttgagttaataaaatgttttgagataattcaa 34115649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 25189201 - 25189287
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    ||||||||  ||||||| |||||| | |||||||| ||||||||||| ||||  ||||||| |||||  |||||||| |||||||||    
T  25189201 caaacaatgaaattcacttcaaagtatttgaattccctcaaaacattgcattacctcaaaacattcccacatccaaacacactctta 25189287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 162
Target Start/End: Original strand, 34398938 - 34399008
Alignment:
Q  93 acctcaaagaagttgaattcgc-tcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||||||| |||||||||| | |||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  34398938 acctcaaagtagttgaattcacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 34399008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 136
Target Start/End: Complemental strand, 43791174 - 43791116
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 136  Q
    |||||||| || |||||||||||| | |||||||| ||||||||||||||||| |||||    
T  43791174 caaacaatggagttcacctcaaagtatttgaattccctcaaaacattacattccctcaa 43791116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 9784988 - 9784943
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||||||||| |||||||| |||||| ||||||||    
T  9784988 agtgtgtttggatggaggaatgttttgagggaatgtattgttttga 9784943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 23548668 - 23548623
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||||||||| |||||||| |||||| ||||||||    
T  23548668 agtgtgtttggatggaggaatgttttgagggaatgtattgttttga 23548623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 26162194 - 26162121
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    ||||||||||||||| ||||| |||||||| ||||||||||| |||   ||||||| || ||||||||| ||||    
T  26162194 agtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 26162121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 31632724 - 31632797
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    ||||||||||||||| ||||| |||||||| ||||||||||| |||   ||||||| || ||||||||| ||||    
T  31632724 agtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 31632797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 34399006 - 34398961
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||    
T  34399006 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 34398961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 18789600 - 18789544
Alignment:
Q  79 aaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctca 135  Q
    ||||||| ||||||||||||||| | |||||||| |||  |||||||||||||||||    
T  18789600 aaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattctctca 18789544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 282
Target Start/End: Complemental strand, 41147989 - 41147921
Alignment:
Q  214 tatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaat 282  Q
    ||||||||||| |||  ||||| ||||||||||| |||||| ||||||||| |||||| ||||| ||||    
T  41147989 tatcatatcctgattccatttgttgtttggtgcatcaatagaaaaggataaattaaacttatttataat 41147921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 291
Target Start/End: Complemental strand, 45884787 - 45884695
Alignment:
Q  199 aggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 291  Q
    |||||||||||||| ||||||||| | ||| ||| || ||||| |||||||| || ||| |||||||||||| | |||| ||||  |||||||    
T  45884787 aggatatgataaaattatcatatcttgattcaatatgttgtttagtgcaccagtatgaatggataatttaaaaccatttttaatcatatccta 45884695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 44107783 - 44107834
Alignment:
Q  237 tgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatc 288  Q
    |||||||||||||||||||||| ||||| |||||||| || ||||| |||||    
T  44107783 tgtttggtgcaccaataggaaatgataaattaaaccttttcctaatcctatc 44107834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 29639190 - 29639276
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    |||||||| ||||||||||||||  | |||||||  |||| |||||||||||| || |||| |||||  |||||| | |||||||||    
T  29639190 caaacaatggaattcacctcaaaatatttgaatttcctcataacattacattccctgaaaacattcccccatccatacacactctta 29639276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 32650657 - 32650611
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    ||||||||| |||||||||||||| | |||||||| |||||||||||    
T  32650657 caaacaataaaattcacctcaaagtatttgaattccctcaaaacatt 32650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 18789303 - 18789262
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgtt 46  Q
    |||||||||||||||||||||||||||||  ||| |||||||    
T  18789303 agtgtgtttggatggaggaatattttgagagaatataatgtt 18789262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 18926861 - 18926816
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||| ||||| || | |||||||||||||||||||||||||    
T  18926861 agtgtgttttgatggggggacattttgaggtaatgtaatgttttga 18926816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 25189283 - 25189238
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||  ||||| ||||||||||||| ||||||||||    
T  25189283 agtgtgtttggatgtgggaatgttttgaggtaatgcaatgttttga 25189238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 28539225 - 28539180
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||| ||||| |||||||| |||||| ||||||||    
T  28539225 agtgtgtttggatgggggaatgttttgagggaatgtattgttttga 28539180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 29195756 - 29195707
Alignment:
Q  115 tcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    |||||||||||||||  |||||||||||||  |||||||| |||||||||    
T  29195756 tcaaaacattacattacctcaaaatattcctccatccaaacacactctta 29195707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 29639272 - 29639199
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    ||||||| ||||||| ||||| |||| ||| ||||||||||| |||   ||||||| |||||||||||| ||||    
T  29639272 agtgtgtatggatgggggaatgttttcagggaatgtaatgttatgaggaaattcaaatattttgaggtgaattc 29639199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 35777012 - 35776939
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    ||||||||||||||  ||||| |||||||| ||||||||||| |||   ||||||| || ||||||||| ||||    
T  35777012 agtgtgtttggatgagggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 35776939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 22351922 - 22351874
Alignment:
Q  12 ttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaa 60  Q
    |||||||| ||||| ||||| |||||||||||||||||| | |||||||    
T  22351922 ttggatgggggaatgttttggggtaatgtaatgttttgagagaattcaa 22351874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 22391562 - 22391622
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaa 138  Q
    ||||||||  |||||||||||||  | || ||||| ||||||||||||||||| |||||||    
T  22391562 caaacaatgaaattcacctcaaaatatttaaattctctcaaaacattacattccctcaaaa 22391622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 40854053 - 40854133
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgc-tcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 166  Q
    ||||||| ||||||| |||||||||| | |||||| ||||||||| |||| || ||| |  |||||||| |||||||||||    
T  40854053 gaattcaactcaaagtagttgaattcccctcaaaatattacattccctcagaacatttccccatccaaacacactcttagg 40854133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 5e-53; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 9763169 - 9763036
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  9763169 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgagggaattcaattattgtgaggtggattcaaacaatagaattcacctcaaagtag 9763070  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaa 138  Q
    |||||||| ||||||||||||||||| |||||||    
T  9763069 ttgaattccctcaaaacattacattccctcaaaa 9763036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 6919709 - 6919873
Alignment:
Q  4 tagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaa 103  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||||   ||||||| || ||||||||| |||||||||||||||||||||| |||       
T  6919709 tagtgtgtttggatggaggaatggtttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaa-tg 6919807  T
Q  104 gttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggtc 169  Q
    ||||||||| ||||||||||||| ||| ||||||| |||||  |||||||| ||||||||||||||    
T  6919808 gttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacacactcttagggtc 6919873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 776082 - 776215
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||| ||||||| ||| |||||||| |||||||||||||||   ||||||| || ||| || |  |||||||||||||||||||||| |||| ||    
T  776082 agtgtgtttagatggagaaatgttttgagggaatgtaatgttttgaggaaattcaactactttaagttaaattcaaacaatagaattcaccttaaagtag 776181  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaa 138  Q
    |||||||  ||||||||||||||||| |||||||    
T  776182 ttgaatttcctcaaaacattacattccctcaaaa 776215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 9285768 - 9285647
Alignment:
Q  41 aatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 140  Q
    ||||||||||   ||||||| || |||||| || ||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||| ||||||| |    
T  9285768 aatgttttgagggaattcaactactttgagatgaattcaaacaatagaattcagctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 9285669  T
Q  141 ttccgtcatccaaagacactct 162  Q
    ||||  |||||||| |||||||    
T  9285668 ttcccccatccaaacacactct 9285647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 9763010 - 9763173
Alignment:
Q  1 ttatagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaa 100  Q
    |||||||||||||||| || | ||| |||||||| |||||||||||||||   ||||||| || ||||||||| |||| |    | |||| ||||||| |    
T  9763010 ttatagtgtgtttggaaggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaca 9763109  T
Q  101 gaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
      | |||||||| ||||||||||||||||  |||||||||||||  |||||||| |||||||||    
T  9763110 ataattgaattccctcaaaacattacattacctcaaaatattcctccatccaaacacactctta 9763173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 160
Target Start/End: Complemental strand, 6919864 - 6919710
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| ||||| |||||||| || ||||||||||||   |||||||  ||||  ||||| |||| |    | ||||||||||||||| ||    
T  6919864 agtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattcaaccattta-aggtgaattctattgtttgaattcacctcaaagtag 6919766  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 160  Q
    |||||||| ||||||||||||||||| ||||||  |||||  |||||||| |||||    
T  6919765 ttgaattccctcaaaacattacattccctcaaaccattcctccatccaaacacact 6919710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 1368561 - 1368477
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||||||||||||||||||  | |||||||| || |||| ||||||||||||||||| |||||  |||||||| |||||||    
T  1368561 caaacaatagaattcacctcaaaacatttgaattcccttaaaatattacattctctcaaaacattcctccatccaaacacactct 1368477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 9285649 - 9285768
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||   ||||||| || |||||| || |||| |    | ||||||| ||||||| ||    
T  9285649 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagctgaattctattgtttgaattcatctcaaagtag 9285748  T
Q  105 ttgaattcgctcaaaacatt 124  Q
    |||||||| |||||||||||    
T  9285749 ttgaattccctcaaaacatt 9285768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 168
Target Start/End: Original strand, 34244969 - 34245059
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggt 168  Q
    |||||||| ||||| || |||||| | |||||||| ||||||||||||||||| ||||||| |||||  |||||||| ||||||| |||||    
T  34244969 caaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctaagggt 34245059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 28918249 - 28918162
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    ||||||||  |||||||||||||| | |||||||  || |||||||||||||| ||||||| |||||  |||||||| ||||||||||    
T  28918249 caaacaatgaaattcacctcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactcttag 28918162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 15299471 - 15299417
Alignment:
Q  90 ttcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattcc 144  Q
    |||||||||||| |||||||||| ||||||||||||||||| ||||||| |||||    
T  15299471 ttcacctcaaagtagttgaattctctcaaaacattacattcgctcaaaacattcc 15299417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 168
Target Start/End: Original strand, 29889423 - 29889513
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggt 168  Q
    |||| ||| |||||||| |||||| | |||||||| |||||||||||||||||  |||||| |||||  |||||||| ||||||| |||||    
T  29889423 caaataatggaattcacatcaaagtatttgaattccctcaaaacattacattccatcaaaacattcctccatccaaacacactctaagggt 29889513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 18596772 - 18596691
Alignment:
Q  201 gatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaat 282  Q
    |||||||||||||||||||||| | ||| ||||||||||| | || || | || |||| |||||||||||||||||| ||||    
T  18596772 gatatgataaaactatcatatcttgattcaatttgatgttcgatgtactagtaagaaatgataatttaaacctatttttaat 18596691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 34245051 - 34245006
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||    
T  34245051 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 34245006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 302
Target Start/End: Complemental strand, 8547542 - 8547478
Alignment:
Q  238 gtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaatcaccctttg 302  Q
    |||||| ||| |||||||||||||||| |||||||||||||||||  |||| || ||||||||||    
T  8547542 gtttggagcatcaataggaaaggataacttaaacctatttctaatcttatcatattcaccctttg 8547478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 8574760 - 8574828
Alignment:
Q  98 aaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 166  Q
    |||| |||||||||| ||||||||||||||||| ||||||| ||| |  |||||||| |||||||||||    
T  8574760 aaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactcttagg 8574828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 15299510 - 15299566
Alignment:
Q  88 aattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattcc 144  Q
    |||||||||||||| ||||||||||  |||||||||||||||| ||||||| |||||    
T  15299510 aattcacctcaaagtagttgaattccttcaaaacattacattccctcaaaacattcc 15299566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 28918167 - 28918235
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtg 73  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| |   ||||||| || |||||||||    
T  28918167 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattcaaatactttgaggtg 28918235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 168
Target Start/End: Complemental strand, 8574759 - 8574689
Alignment:
Q  98 aaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggt 168  Q
    |||| |||||||||| ||||||||||||||||| ||||||| ||| |  |||||||| ||||||| |||||    
T  8574759 aaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactctaagggt 8574689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 15299579 - 15299514
Alignment:
Q  7 tgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtg 73  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||||  ||||||| || |||||||||    
T  15299579 tgtgtttggatgg-ggaatgttttgagggaatgtaatgttttgaaggaattcaactactttgaggtg 15299514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 29889505 - 29889460
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||    
T  29889505 agtgtgtttggatggaggaatgttttgatggaatgtaatgttttga 29889460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 302
Target Start/End: Complemental strand, 8573895 - 8573831
Alignment:
Q  238 gtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaatcaccctttg 302  Q
    |||||| ||| |||||||||| ||||| |||||||||||||||||  |||| || ||||||||||    
T  8573895 gtttggagcatcaataggaaatgataacttaaacctatttctaatcttatcatattcaccctttg 8573831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 13487359 - 13487275
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||||||  |||||||||||||| | |||||||| |||| |||| ||||||| ||||||| |||||  |||| ||| |||||||    
T  13487359 caaacaatgaaattcacctcaaagtatttgaattccctcataacactacattccctcaaaacattcccccatctaaacacactct 13487275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 6358237 - 6358300
Alignment:
Q  75 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaa 138  Q
    |||| |||||||||||||||| ||||| | || ||||| ||||||||||||||||  |||||||    
T  6358237 attctaacaatagaattcaccacaaagtatttaaattctctcaaaacattacattacctcaaaa 6358300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 276
Target Start/End: Complemental strand, 14228030 - 14227943
Alignment:
Q  189 ataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatt 276  Q
    ||||||||| | ||||||||||||||||| ||||||| || |||  | ||||||| |  || |||||||| ||||| |||||||||||    
T  14228030 ataagaagacatgatatgataaaactatcttatcctatttcaatccgttgtttggagtgccgataggaaatgataacttaaacctatt 14227943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 1368479 - 1368552
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    ||||||||||||||||||||| |||||||  |||||||| |||| |   ||||||| | |||||||||| ||||    
T  1368479 agtgtgtttggatggaggaatgttttgagagaatgtaatattttaagggaattcaaatgttttgaggtgaattc 1368552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 15299412 - 15299469
Alignment:
Q  16 atggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtg 73  Q
    |||||||||| |||||||  ||||||||||||||| | ||||||| || |||||||||    
T  15299412 atggaggaatgttttgagcgaatgtaatgttttgagagaattcaactactttgaggtg 15299469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 34364827 - 34364770
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctca 135  Q
    |||||||| ||||||||||||||| | || ||||| |||| |||||||||||| ||||    
T  34364827 caaacaatggaattcacctcaaagtatttaaattccctcataacattacattccctca 34364770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 7e-52; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 3853775 - 3853616
Alignment:
Q  3 atagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaaga 102  Q
    ||||||||||||||||| | ||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||     
T  3853775 atagtgtgtttggatggggaaatattttgaggtaatgtaatgtttggagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 3853676  T
Q  103 agttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||||  ||||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  3853675 agttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 3853616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 3858233 - 3858074
Alignment:
Q  3 atagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaaga 102  Q
    ||||||||||||||||| | ||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||     
T  3858233 atagtgtgtttggatggggaaatattttgaggtaatgtaatgtttggagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 3858134  T
Q  103 agttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||||  ||||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  3858133 agttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 3858074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 13404825 - 13404968
Alignment:
Q  1 ttatagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaa 100  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  13404825 ttatagtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaataaaattcatctcaaa 13404924  T
Q  101 gaagttgaattcgctcaaaacattacattctctcaaaatattcc 144  Q
    | |||||||||| ||||||||||||||||| ||||||| |||||    
T  13404925 gtagttgaattccctcaaaacattacattccctcaaaacattcc 13404968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 5 - 169
Target Start/End: Original strand, 17110871 - 17111035
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| | ||| |||||||| |||||||||||||||   ||||||| || |||||| || |||||||||||||||||||||| |||| ||    
T  17110871 agtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtag 17110970  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggtc 169  Q
    |||||||| ||||||||||||||||| ||||||| ||| |  |||||||| ||||||| ||||||    
T  17110971 ttgaattccctcaaaacattacattccctcaaaacatttctccatccaaacacactctaagggtc 17111035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 17111026 - 17110866
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||   ||||||| || ||| ||||| |||| |    | ||||||| ||||||| ||    
T  17111026 agtgtgtttggatggagaaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtag 17110927  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    |||||||| ||||||||||||||||| ||||||| ||| |  |||||||| ||||||||||    
T  17110926 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactcttag 17110866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 37268164 - 37268086
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaaca 83  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||   |||| |||||||||||||||||||||||||    
T  37268164 agtgtgtttggataggggaatattttgaggtaatgtaatgttttgagggaatttaattattttgaggtggattcaaaca 37268086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 160
Target Start/End: Original strand, 4156228 - 4156324
Alignment:
Q  64 ttttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 160  Q
    ||||||| || ||||||||||||||||||| || |||| |||||||||| ||||||||||||||||| ||||||||||||   |||||||| |||||    
T  4156228 ttttgagttgaattcaaacaatagaattcatcttaaagtagttgaattccctcaaaacattacattccctcaaaatattctcccatccaaacacact 4156324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 40046931 - 40046798
Alignment:
Q  21 ggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaa 120  Q
    ||||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||              ||||||| |||||||||| |||||||    
T  40046931 ggaatgttttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaa--------------ctcaaagtagttgaattccctcaaaa 40046846  T
Q  121 cattacattctctcaaaatattccgtcatccaaagacactcttagggt 168  Q
    |||||||||| ||||||| ||||   |||||||| |||||||||||||    
T  40046845 cattacattccctcaaaacattcatccatccaaacacactcttagggt 40046798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 42740039 - 42739969
Alignment:
Q  54 aattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    ||||||||||||||||||||||||| ||||||| |||||| ||||||| |||||||||| |||||||||||    
T  42740039 aattcaattattttgaggtggattctaacaataaaattcatctcaaagtagttgaattccctcaaaacatt 42739969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 162
Target Start/End: Original strand, 14800022 - 14800119
Alignment:
Q  65 tttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||||  ||||||||||| |||||||||  ||| |||||||||| ||||||||||||| ||| |||||||||||||  |||||||| |||||||    
T  14800022 tttgaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 14800119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 33902823 - 33902667
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaat-tattttgaggtggattcaaa-caatagaattcacctcaaaga 102  Q
    |||||||| |||||| ||||| ||| |||| |||||  ||||||||   |||||||  || ||||||||| ||||||| ||||||||||||||  ||||     
T  33902823 agtgtgttgggatgggggaatgttt-gagggaatgttttgttttgagggaattcaaactactttgaggtgaattcaaaacaatagaattcacc--aaagt 33902727  T
Q  103 agttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  33902726 agttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 33902667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 160
Target Start/End: Original strand, 3853618 - 3853773
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||   ||||||| || ||||||||| |||| |    | |||| |||||||||  |     
T  3853618 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataa 3853717  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 160  Q
    |||||||| ||| ||||||||||||  ||||||||||| |  |||||||| |||||    
T  3853718 ttgaattccctccaaacattacattacctcaaaatatttccccatccaaacacact 3853773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 160
Target Start/End: Original strand, 3858076 - 3858231
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||   ||||||| || ||||||||| |||| |    | |||| |||||||||  |     
T  3858076 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataa 3858175  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 160  Q
    |||||||| ||| ||||||||||||  ||||||||||| |  |||||||| |||||    
T  3858176 ttgaattccctccaaacattacattacctcaaaatatttccccatccaaacacact 3858231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 24045044 - 24044960
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| ||||||||||||| | | ||||||||  |||||||||||||||| ||||||| ||||| ||||||||| |||||||    
T  24045044 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattccctcatccaaacacactct 24044960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 11744717 - 11744804
Alignment:
Q  77 tcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    |||||||||||||||||||| |||  ||||||||||  ||| |||||||||||| ||| ||||||||  ||||||||| |||||||||    
T  11744717 tcaaacaatagaattcaccttaaactagttgaattccttcacaacattacattccctctaaatattctctcatccaaacacactctta 11744804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 302
Target Start/End: Original strand, 556738 - 556851
Alignment:
Q  189 ataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatc 288  Q
    ||||| ||||||||||||||||| | |||||||||| ||  ||   | ||||| ||||| |||||| ||| ||||| |||||||||||||||||  ||||    
T  556738 ataaggagataggatatgataaaccaatcatatcctgatccaaaccgctgtttcgtgcaacaatagaaaatgataaattaaacctatttctaatcatatc 556837  T
Q  289 ctaatcaccctttg 302  Q
    ||| ||||||||||    
T  556838 ctattcaccctttg 556851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 302
Target Start/End: Complemental strand, 38503985 - 38503885
Alignment:
Q  201 gatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaatcaccctt 300  Q
    |||| |||||||||||||||||||  || |||||| ||||||||||||||| ||||||| |||| ||||||  | ||||||  |||||||| ||||||||    
T  38503985 gataggataaaactatcatatcctgtttcaatttgttgtttggtgcaccaa-aggaaagaataacttaaactcacttctaaccctatcctactcaccctt 38503887  T
Q  301 tg 302  Q
    ||    
T  38503886 tg 38503885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 42711364 - 42711441
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||| ||||||| |||||   ||||||| |||||||||    
T  42711364 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacattccccaatccaaacacactctta 42711441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 33377296 - 33377384
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 166  Q
    |||||||| ||||||||| ||||| | |||||||| ||||||||| || |||| ||||||| |||||  |||||||| |||||||||||    
T  33377296 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatatattccctcaaaacattcccccatccaaacacactcttagg 33377384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 44889438 - 44889354
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| |||||||| |||||| | |||||||| |||||||||||| |||| ||||||| |||||  |||||||| |||||||    
T  44889438 caaacaatggaattcacatcaaagtatttgaattccctcaaaacattatattccctcaaaacattcctccatccaaacacactct 44889354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 273
Target Start/End: Original strand, 26543900 - 26543975
Alignment:
Q  199 aggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaa-ggataatttaaacct 273  Q
    |||||||||||||| |||||||||||| |  |||||  |||||||||||||||||||||| |||||| ||||||||    
T  26543900 aggatatgataaaattatcatatcctactcaaatttcttgtttggtgcaccaataggaaagggataaattaaacct 26543975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 28324743 - 28324688
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaa 60  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||  |||||||    
T  28324743 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaaggaattcaa 28324688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 23011818 - 23011732
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    |||||||| ||||||||||||||| | |||||||| |||| |||||||||||| ||||||| ||||   | |||||| |||||||||    
T  23011818 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattctcccgtccaaacacactctta 23011732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 302
Target Start/End: Original strand, 11066502 - 11066555
Alignment:
Q  249 caataggaaaggataatttaaacctatttctaattctatcctaatcaccctttg 302  Q
    |||||||||||||||| ||||||||||||||||| |||||||| ||| ||||||    
T  11066502 caataggaaaggataacttaaacctatttctaatcctatcctactcagcctttg 11066555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 14991694 - 14991739
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  14991694 agtgtgtttggatgggggaatgttttgaggtaatgtaatgttttga 14991739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 30435250 - 30435365
Alignment:
Q  7 tgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagtt 106  Q
    ||||||||||||||| ||| |||||||| |||||||||||| ||   |||| || || |||||| || ||| ||||||||||||| |||| |||  ||||    
T  30435250 tgtgtttggatggagaaatgttttgagggaatgtaatgtttggagggaatttaacta-tttgagttgaatttaaacaatagaatttaccttaaa-tagtt 30435347  T
Q  107 gaattcgctcaaaacatt 124  Q
    |||||| |||||||||||    
T  30435348 gaattccctcaaaacatt 30435365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 33902669 - 33902714
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||    
T  33902669 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 33902714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 38573433 - 38573522
Alignment:
Q  41 aatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattc 130  Q
    ||||||||||   ||||||| || ||| || || ||||||||||||||||||| ||||||| |||||||||  ||||||||| |||||||    
T  38573433 aatgttttgaggaaattcaactacttttagttgaattcaaacaatagaattcaactcaaagtagttgaatttcctcaaaacactacattc 38573522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 33986006 - 33986074
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtg 73  Q
    ||||||||||||||| ||||| | |||| ||||||||||||||||| | ||||||| || |||||||||    
T  33986006 agtgtgtttggatgggggaatgtcttgaagtaatgtaatgttttgagagaattcaaatactttgaggtg 33986074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 36103185 - 36103097
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 166  Q
    ||||||||  ||||||| |||||| | |||||||  || |||||||||||||| ||||||| |||||  |||||||| |||||||||||    
T  36103185 caaacaatgcaattcacatcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactcttagg 36103097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 4156326 - 4156279
Alignment:
Q  3 atagtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||    
T  4156326 atagtgtgtttggatgggagaatattttgagggaatgtaatgttttga 4156279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 36103103 - 36103146
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgtttt 48  Q
    ||||||||||||||||||||| |||||||| |||||||||||||    
T  36103103 agtgtgtttggatggaggaatgttttgagggaatgtaatgtttt 36103146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 291
Target Start/End: Complemental strand, 9028742 - 9028688
Alignment:
Q  237 tgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 291  Q
    ||||||||||||||| |  |||||||||||||||||||||| |||| ||||||||    
T  9028742 tgtttggtgcaccaacataaaaggataatttaaacctatttttaatcctatccta 9028688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 9982642 - 9982711
Alignment:
Q  8 gtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    |||||||||||||| ||| |||| ||||||||||||||||||| | |||| || |||||||||||| ||||    
T  9982642 gtgtttggatggag-aatgttttaaggtaatgtaatgttttgagagaatttaaatattttgaggtgaattc 9982711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 33986087 - 33986001
Alignment:
Q  79 aaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    |||||||  |||||||||||||| | |||||||| ||||||||||||||||   |||| | |||||  |||||||| ||||||||||    
T  33986087 aaacaatgaaattcacctcaaagtatttgaattctctcaaaacattacattacttcaagacattcccccatccaaacacactcttag 33986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 14800117 - 14800072
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||| |||||||||||||| || ||||||||||||    
T  14800117 agtgtgtttggatgggggaatattttgagggaaagtaatgttttga 14800072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 24044962 - 24045035
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    ||||||||||||||  ||||| |||||||| ||||||||||||||||  ||||||| ||  |||||||| ||||    
T  24044962 agtgtgtttggatgagggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattc 24045035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 35979003 - 35979084
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacac 159  Q
    |||||||| ||||||||||||||| | |||||||| |||  || ||||||||| ||||||| |||||  |||||||| ||||    
T  35979003 caaacaatggaattcacctcaaagtatttgaattccctcttaagattacattccctcaaaacattcctccatccaaacacac 35979084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 40046806 - 40046851
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    |||||||||||||||| |||| |||||||| |||||||||||||||    
T  40046806 agtgtgtttggatggatgaatgttttgagggaatgtaatgttttga 40046851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 44889356 - 44889401
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||||    
T  44889356 agtgtgtttggatggaggaatgttttgagggaatataatgttttga 44889401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 15186816 - 15186876
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaa 138  Q
    ||||||||||||||||||| |||  | |||||||  |||||||||||||||| ||||||||    
T  15186816 caaacaatagaattcaccttaaactatttgaatttactcaaaacattacattatctcaaaa 15186876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 28324661 - 28324745
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||||||  |||||| ||||| | | ||||||||  |||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  28324661 caaacaatgtaattcagctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcctccatccaaacacactct 28324745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 42711437 - 42711324
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||| | ||||| |||||||| |||||||||||||||   ||||||| || |||||| || |||||      || ||||| ||||||| ||    
T  42711437 agtgtgtttggattggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagttgaattca------agtattcaactcaaagtag 42711344  T
Q  105 ttgaattcgctcaaaacatt 124  Q
    |||||||  |||||||||||    
T  42711343 ttgaatttcctcaaaacatt 42711324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 166
Target Start/End: Complemental strand, 14321 - 14235
Alignment:
Q  79 aaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 166  Q
    |||||||  |||||||| ||||| | |||||||| || |||||||||||||| ||| ||| |||||  |||||||| |||||||||||    
T  14321 aaacaatgaaattcaccccaaagtatttgaattcccttaaaacattacattccctccaaacattcc-ccatccaaacacactcttagg 14235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 515613 - 515570
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgtttt 48  Q
    ||||||||||||||||||||| |||||| | |||||||||||||    
T  515613 agtgtgtttggatggaggaatgttttgaaggaatgtaatgtttt 515570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 13144667 - 13144616
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacatt 129  Q
    |||||||| ||||||||||||||| | |||||||| |||| |||||||||||    
T  13144667 caaacaatggaattcacctcaaagtatttgaattccctcataacattacatt 13144616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 160
Target Start/End: Complemental strand, 13404968 - 13404829
Alignment:
Q  21 ggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaa 120  Q
    ||||| |||||||| |||||||||||||||   ||||||| || |||||| || |||  |    | |||| |||||||||  | |||||||| |||||||    
T  13404968 ggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagatgaattttattgtttgaatccacctcaaaataattgaattccctcaaaa 13404869  T
Q  121 cattacattctctcaaaatattccgtcatccaaagacact 160  Q
    |||||||||  ||||||||||| |  |||||||| |||||    
T  13404868 cattacattacctcaaaatatttccccatccaaacacact 13404829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 31807467 - 31807409
Alignment:
Q  103 agttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||||| ||||||||||||||||| ||||||| ||||  ||||||||| |||||||    
T  31807467 agttgaattccctcaaaacattacattc-ctcaaaacattctctcatccaaacacactct 31807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 1088276 - 1088362
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    |||||||| ||||| ||| ||||  | |||||||  ||||||||| ||||||||||||||| |||||  || ||||| |||||||||    
T  1088276 caaacaatggaatttaccccaaaatatttgaatttcctcaaaacaatacattctctcaaaacattcctccacccaaacacactctta 1088362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 8049338 - 8049272
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattcc 144  Q
    ||||||||  |||| ||||||||| | |||||||| |||||||||||| |||| ||||||| |||||    
T  8049338 caaacaatgaaatttacctcaaagtatttgaattccctcaaaacattatattccctcaaaacattcc 8049272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 291
Target Start/End: Original strand, 22573142 - 22573196
Alignment:
Q  237 tgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 291  Q
    ||||||||||||||| |||||| ||||| || ||||| |||||||| ||||||||    
T  22573142 tgtttggtgcaccaacaggaaatgataagtttaacctgtttctaatcctatccta 22573196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 26520438 - 26520484
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    |||||||| ||||||||||||||| | |||||||| |||||||||||    
T  26520438 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 26520484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 30444932 - 30444978
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    |||||||| ||||||||||||||| | |||||||| |||||||||||    
T  30444932 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 30444978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 34008865 - 34008819
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    |||||||| ||||||||||||||| | |||||||| |||||||||||    
T  34008865 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 34008819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 31734323 - 31734364
Alignment:
Q  237 tgtttggtgcaccaataggaaaggataatttaaacctatttc 278  Q
    ||||||||||||||||| |||| ||||| |||||||||||||    
T  31734323 tgtttggtgcaccaataagaaatgataaattaaacctatttc 31734364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 32626115 - 32626070
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    |||||| |||||||| ||||| |||||||| |||||||||||||||    
T  32626115 agtgtgcttggatgggggaatcttttgagggaatgtaatgttttga 32626070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 35979084 - 35979047
Alignment:
Q  6 gtgtgtttggatggaggaatattttgaggtaatgtaat 43  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  35979084 gtgtgtttggatggaggaatgttttgagggaatgtaat 35979047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 282
Target Start/End: Original strand, 40028781 - 40028874
Alignment:
Q  189 ataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaat 282  Q
    ||||| ||| |||||||||| ||| |||||||||||   | ||| || |||||||||| |||| |||||| ||||| || ||||| ||||||||    
T  40028781 ataaggagacaggatatgattaaaatatcatatcctgcctcaatctgttgtttggtgcgccaacaggaaatgataactttaacctttttctaat 40028874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 515531 - 515615
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||||||  ||||||| |||||| | ||||| || || ||||||||||||||  |||||| |||||  |||||||| |||||||    
T  515531 caaacaatgaaattcacatcaaagtatttgaactcccttaaaacattacattccttcaaaacattcctccatccaaacacactct 515615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 3346397 - 3346477
Alignment:
Q  189 ataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaa 269  Q
    |||| ||||||  ||||||||||| |||| |||||||||| ||||   |||||||||||| ||||| ||| ||||| ||||    
T  3346397 ataacaagataaaatatgataaaattatcctatcctaattaaattcattgtttggtgcactaatagaaaaagataaattaa 3346477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 7202921 - 7202885
Alignment:
Q  88 aattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    |||||||||||||| |||||||||| |||||||||||    
T  7202921 aattcacctcaaagtagttgaattccctcaaaacatt 7202885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 7e-52; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 41461515 - 41461674
Alignment:
Q  3 atagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaaga 102  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||   |||| ||||||||||||||||||||||||||||||||||||||||||      
T  41461515 atagtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaatttaattattttgaggtggattcaaacaatagaattcacctcaaaat 41461614  T
Q  103 agttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  41461615 agttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 41461674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 54 - 164
Target Start/End: Complemental strand, 27033598 - 27033488
Alignment:
Q  54 aattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaa 153  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||  |||||||    
T  27033598 aattcaattcttttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaa 27033499  T
Q  154 agacactctta 164  Q
    | |||||||||    
T  27033498 acacactctta 27033488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 784795 - 784952
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||||  ||| |||||||| ||||||||||||||||  |||| || || |||||| || |||||||||||||||||||||| |||| ||    
T  784795 agtgtgtttggatggaaaaatgttttgagggaatgtaatgttttgaaggaatttaactactttgagttgaattcaaacaatagaattcaccttaaagtag 784894  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| |||||||||||||||||  ||||||||||||  |||||||| |||||||    
T  784895 ttgaattccctcaaaacattacattccatcaaaatattcccccatccaaacacactct 784952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 14365702 - 14365858
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc-aaacaatagaattcacctcaaagaa 103  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||   ||||||| || ||||||||| |||| ||||||||||||||||  ||||| |    
T  14365702 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcac--caaagta 14365799  T
Q  104 gttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  14365800 gttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 14365858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 14537201 - 14537320
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||  |||||||| || ||||||||| |||||||||||||||||||||| |||| ||    
T  14537201 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtag 14537300  T
Q  105 ttgaattcgctcaaaacatt 124  Q
    |||||||| |||||||||||    
T  14537301 ttgaattccctcaaaacatt 14537320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 193 - 301
Target Start/End: Original strand, 40626432 - 40626540
Alignment:
Q  193 gaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaa 292  Q
    ||||| |||||||||||||||||||||||| | ||| ||| || ||||||||||||||||||||||||||||||||||  |||||||||| ||||||||     
T  40626432 gaagacaggatatgataaaactatcatatcttgattcaatctgctgtttggtgcaccaataggaaaggataatttaaatatatttctaatcctatcctac 40626531  T
Q  293 tcacccttt 301  Q
    |||||||||    
T  40626532 tcacccttt 40626540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 5 - 154
Target Start/End: Original strand, 11716410 - 11716550
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    |||||||||||||||| |||| |||||||| |||||||||||||||   ||||||| || ||||||||| |||||||||||||||||||||             
T  11716410 agtgtgtttggatggaagaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcacc--------- 11716500  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaa 154  Q
    |||||||| ||||||||||||||||| ||||||| |||||  ||||||||    
T  11716501 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaa 11716550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 14365856 - 14365698
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaata-gaattcacctcaaagaa 103  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||   ||||||| || ||||  ||| |||| |    |  ||||||||||||||| |    
T  14365856 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttg--gtgaattctattgttttgaattcacctcaaagta 14365759  T
Q  104 gttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    ||||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||||||    
T  14365758 gttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 14365698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 164 - 302
Target Start/End: Original strand, 18665098 - 18665232
Alignment:
Q  164 agggtccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggata 263  Q
    ||||||||||||||||||| ||||     ||| |||| ||||||||||||||||||||| |  | ||||||| ||||| ||||||||| |||||||||||    
T  18665098 agggtccgtttggtgcacaagatag----gaacatagaatatgataaaactatcatatcttggtgtaatttgttgtttcgtgcaccaaaaggaaaggata 18665193  T
Q  264 atttaaacctatttctaattctatcctaatcaccctttg 302  Q
    | |||||||||||||||||  |||| || ||||||||||    
T  18665194 acttaaacctatttctaataatatcttactcaccctttg 18665232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44256267 - 44256181
Alignment:
Q  1 ttatagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaataga 88  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||   ||||| |||||||||||||| ||||||||||||||    
T  44256267 ttatagtgtgtttggatgggggaatattt-gaggtaatgtaatgttttgagggaattcgattattttgaggtgaattcaaacaataga 44256181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 41461672 - 41461512
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||   ||||||| |||||||||||| |||| |    | |||| |||||||||  |     
T  41461672 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 41461573  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    || ||||| ||||||||||||||||  ||||||||||| |  |||||||| ||||| ||||    
T  41461572 ttaaattccctcaaaacattacattacctcaaaatatttccccatccaaacacactattag 41461512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 14954268 - 14954393
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaa-caatagaattcacctcaaagaa 103  Q
    ||||||||||||| ||||||| |||||||  |||||||| |||| | | ||||||| || ||| | ||  ||||||| ||||||||||||||| |||| |    
T  14954268 agtgtgtttggatagaggaatgttttgagtgaatgtaatcttttaagagaattcaactactttaaagtaaattcaaaacaatagaattcaccttaaagta 14954367  T
Q  104 gttgaattcgctcaaaacattacatt 129  Q
    ||||||||| ||||||||||||||||    
T  14954368 gttgaattccctcaaaacattacatt 14954393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 784950 - 784790
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| |||||||||||| | |||||||||||||||   ||||||| || ||| ||||| |||| |    | ||||||| ||||||| ||    
T  784950 agtgtgtttggatgggggaatattttgatggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtag 784851  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    || |||||  |||||||||||||||| ||||||| |||    |||||||| ||||||||||    
T  784850 ttaaattccttcaaaacattacattccctcaaaacatttttccatccaaacacactcttag 784790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 18881877 - 18881821
Alignment:
Q  195 agataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaa 251  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18881877 agataagatatgataaaactatcatatcctaattaaatttgatgtttggtgcaccaa 18881821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 17180374 - 17180295
Alignment:
Q  85 tagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    ||||||||| ||||||  |||||||||| ||||||||||||||||| ||||||| ||||| ||||||||| |||||||||    
T  17180374 tagaattcatctcaaaatagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 17180295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 11532242 - 11532324
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 160  Q
    |||||||| ||||||||||||||| | |||||||| ||||||||||||||||| ||| |||||||||  |||||||| |||||    
T  11532242 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattccctccaaatattcccccatccaaacacact 11532324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 11793979 - 11793897
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 160  Q
    |||||||| ||||||||||||||| | |||||||| |||| |||||||||||| |||||||||||||  |||||||| |||||    
T  11793979 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaatattcccccatccaaacacact 11793897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 162
Target Start/End: Complemental strand, 10244285 - 10244177
Alignment:
Q  54 aattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaa 153  Q
    ||||||| || |||||||||  ||||||||||| |||||||||  ||| |||||||||| ||||||||||||| ||| |||| |||||||   |||||||    
T  10244285 aattcaactactttgaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcagaatattctcccatccaa 10244186  T
Q  154 agacactct 162  Q
    | |||||||    
T  10244185 acacactct 10244177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 14537274 - 14537198
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctt 163  Q
    ||||||||||||||| |||||||||  ||||||||||||||||| ||||||| |||||  |||||||| ||||||||    
T  14537274 gaattcacctcaaagtagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactctt 14537198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 10480203 - 10480116
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    |||||||| ||||||||||||||| | |||||||| |||  |||||||||||| ||||||| |||||  |||||||| ||||||||||    
T  10480203 caaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 10480116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 11716483 - 11716408
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||||||||||||| |||||||||| ||||||||||||||||| ||||||| ||||   |||||||| |||||||    
T  11716483 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcttccatccaaacacactct 11716408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 165
Target Start/End: Complemental strand, 11684711 - 11684596
Alignment:
Q  41 aatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 140  Q
    ||||||||||   ||||||| || ||||||||| ||||||||||||||||||||||         ||||||| ||||||||||||||||| ||||||| |    
T  11684711 aatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcacct---------tgaattccctcaaaacattacattccctcaaaaca 11684621  T
Q  141 ttccgtcatccaaagacactcttag 165  Q
    ||||  |||||||| ||| ||||||    
T  11684620 ttcccccatccaaacacattcttag 11684596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 11793894 - 11793970
Alignment:
Q  2 tatagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| |||   ||||||| || ||||||||| ||||    
T  11793894 tatagtgtgtttggatgggggaatattttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 11793970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 3345842 - 3345783
Alignment:
Q  65 tttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    ||||||||| ||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  3345842 tttgaggtgaattcaaacaatagaatttaccttaaagtagttgaattccctcaaaacatt 3345783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 11824718 - 11824801
Alignment:
Q  41 aatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    ||||||||||   ||||||| || |||||| || |||||||||||| ||||||||| |||| |||||||||| |||||||||||    
T  11824718 aatgttttgagggaattcaactactttgagatgaattcaaacaatataattcaccttaaagtagttgaattccctcaaaacatt 11824801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 17905729 - 17905651
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    ||||||||||||||  | ||||||||  | |||||||||||||||||||||| ||||| |||||| || ||||||||||    
T  17905729 gaattcacctcaaaatatttgaattcctttaaaacattacattctctcaaaacattccctcatcctaacacactcttag 17905651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 11532324 - 11532251
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    ||||||||||||||| ||||||||| |||| |||||||||||||||   ||||||| || ||||||||| ||||    
T  11532324 agtgtgtttggatgggggaatatttggagggaatgtaatgttttgagggaattcaaatactttgaggtgaattc 11532251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 40026151 - 40026082
Alignment:
Q  75 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattcc 144  Q
    ||||||||||||||||||||||||||| | || ||||  |||||||||||| |||  |||||||||||||    
T  40026151 attcaaacaatagaattcacctcaaagtatttaaatttcctcaaaacattatattacctcaaaatattcc 40026082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 13017863 - 13017779
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| ||||||||||||||| | |||||||| || |||| ||||||||| ||||||| ||| |  |||||||| |||||||    
T  13017863 caaacaatggaattcacctcaaagtatttgaattcccttaaaatattacattccctcaaaacatttccacatccaaacacactct 13017779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 45094460 - 45094544
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| |||||||| | |||| |||| ||||| |||||||||||| |||| ||||||| ||||| |||| |||| |||||||    
T  45094460 caaacaatggaattcactttaaagtagttaaattccctcaaaacattatattccctcaaaacattccctcattcaaacacactct 45094544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 6457567 - 6457638
Alignment:
Q  199 aggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaa 270  Q
    ||||||||||| |||||||||||| | ||| ||| || |||||||||||||||||| ||| ||||| |||||    
T  6457567 aggatatgatagaactatcatatcatgattcaatctgttgtttggtgcaccaatagaaaatgataaattaaa 6457638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 29279086 - 29279035
Alignment:
Q  9 tgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaa 60  Q
    |||||||||| |||||| ||||||||||||||||||||| || |||||||||    
T  29279086 tgtttggatgaaggaatgttttgaggtaatgtaatgtttcgagataattcaa 29279035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 40054607 - 40054517
Alignment:
Q  201 gatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 291  Q
    |||||||||| ||||| |||||||| || ||| |  |||||||||||||||||| ||| |||||  ||||||||||  |||| ||||||||    
T  40054607 gatatgataacactattatatcctatttaaatctcttgtttggtgcaccaatagaaaatgataaactaaacctattgttaatcctatccta 40054517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 17180299 - 17180364
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgag 70  Q
    ||||||||||||||  ||||| |||||||| |||||||||||||||   ||||||| |||||||||    
T  17180299 agtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactattttgag 17180364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 27033492 - 27033565
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    ||||||||||||||| ||||| |||||||  |||||||||||||||   ||||||| || ||||||||| ||||    
T  27033492 agtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttgaggtgaattc 27033565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 135
Target Start/End: Original strand, 32839637 - 32839694
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctca 135  Q
    |||||||| |||||||| |||||| | |||||||| ||||||||||||||||| ||||    
T  32839637 caaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattccctca 32839694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 30698365 - 30698289
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaa 154  Q
    ||||||||  |||||||||||| | | ||||||||  |||||||||||||||| ||||||| |||||  ||||||||    
T  30698365 caaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaa 30698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 138
Target Start/End: Complemental strand, 740791 - 740728
Alignment:
Q  75 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaa 138  Q
    |||||||||||| |||||||||||||  |  ||||||| | |||||||||||||| ||||||||    
T  740791 attcaaacaataaaattcacctcaaatgatatgaattctcacaaaacattacattatctcaaaa 740728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 11607304 - 11607257
Alignment:
Q  79 aaacaatagaattcacctcaaagaagttgaattcgctcaaaacattac 126  Q
    ||||||| ||||||||||||||| | |||||||| |||||||||||||    
T  11607304 aaacaatggaattcacctcaaagtatttgaattccctcaaaacattac 11607257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 11684603 - 11684646
Alignment:
Q  7 tgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||| ||||| |||||||| |||||||||||||||    
T  11684603 tgtgtttggatgggggaatgttttgagggaatgtaatgttttga 11684646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 16567818 - 16567767
Alignment:
Q  237 tgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatc 288  Q
    ||||||||||||||| || ||||||||| || |||||||||||||| |||||    
T  16567818 tgtttggtgcaccaacagaaaaggataagtttaacctatttctaatcctatc 16567767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 28740679 - 28740620
Alignment:
Q  79 aaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaa 138  Q
    ||||||| ||||| || |||||| | |||||||| ||||||||||||||||| |||||||    
T  28740679 aaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattccctcaaaa 28740620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 38490603 - 38490532
Alignment:
Q  193 gaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataa 264  Q
    ||||| |||||| ||||||||||||||||| |  || |||||| ||||||||||  |||||| |||||||||    
T  38490603 gaagacaggataggataaaactatcatatcttgtttcaatttgttgtttggtgcgtcaatagaaaaggataa 38490532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 136
Target Start/End: Original strand, 7167656 - 7167714
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 136  Q
    ||||||||  |||||||||||||| | ||||||||  |||||||||||||||| |||||    
T  7167656 caaacaatgaaattcacctcaaagtatttgaattccttcaaaacattacattccctcaa 7167714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 7228001 - 7228087
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    ||||||||  |||| ||||||| | | || |||||  |||||||||||||||||||||||| ||| |  |||||||| |||||||||    
T  7228001 caaacaatgaaatttacctcaaggtatttaaattccttcaaaacattacattctctcaaaacatttccccatccaaacacactctta 7228087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 8736430 - 8736476
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    |||||||| ||||||||||||||| | |||||||| |||||||||||    
T  8736430 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 8736476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 30698289 - 30698351
Alignment:
Q  11 tttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtg 73  Q
    ||||||||| ||||| |||||||| ||||||||||||||||  ||||||| ||  ||||||||    
T  30698289 tttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtg 30698351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 39630308 - 39630223
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    ||||||||||||||| |||||||  | |||||||| ||||||||| ||||||| ||||||| ||| |  ||| |||| |||||||||    
T  39630308 caaacaatagaattcccctcaaa-tatttgaattccctcaaaacaatacattccctcaaaacatttctccattcaaacacactctta 39630223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 271
Target Start/End: Complemental strand, 3045741 - 3045708
Alignment:
Q  238 gtttggtgcaccaataggaaaggataatttaaac 271  Q
    |||||||||| |||||||||||||||||||||||    
T  3045741 gtttggtgcatcaataggaaaggataatttaaac 3045708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 3092284 - 3092329
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||| ||||||||||||||| |||||||| |||||| ||||||||    
T  3092284 agtgtatttggatggaggaatgttttgagggaatgtattgttttga 3092329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 307
Target Start/End: Original strand, 5020200 - 5020293
Alignment:
Q  214 tatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaatcaccctttgctact 307  Q
    |||||||||||||||||||  | ||||| ||| |||||||  ||||||||  ||||||  |||| |||| ||||| || |||||||||| ||||    
T  5020200 tatcatatcctaatttaatccggtgttttgtggaccaataaaaaaggatacattaaactcatttttaatcctatcttactcaccctttgttact 5020293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 7670385 - 7670438
Alignment:
Q  238 gtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 291  Q
    ||||||||||||||||| ||| ||||| || ||||| |||||||| ||||||||    
T  7670385 gtttggtgcaccaatagaaaatgataagtttaacctgtttctaatcctatccta 7670438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 10480121 - 10480162
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgtt 46  Q
    ||||||||||||||| ||||| |||||||| |||||||||||    
T  10480121 agtgtgtttggatgggggaatgttttgagggaatgtaatgtt 10480162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 11684674 - 11684711
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  11684674 gaattcacctcaaagtagttgaattccctcaaaacatt 11684711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 11981627 - 11981582
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    |||||||||||||| | |||||||||  ||||||||||||||||||    
T  11981627 agtgtgtttggatgaaagaatattttagggtaatgtaatgttttga 11981582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 17905656 - 17905729
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    |||||||| |||||  ||||| |||||||  ||||||||||||| ||  ||||||| |||||||||||| ||||    
T  17905656 agtgtgttaggatgagggaatgttttgagagaatgtaatgttttaaaggaattcaaatattttgaggtgaattc 17905729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 30751365 - 30751418
Alignment:
Q  108 aattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactc 161  Q
    ||||| |||||||||||||||| |||||||| ||||  ||||||||| ||||||    
T  30751365 aattcactcaaaacattacattatctcaaaacattctctcatccaaacacactc 30751418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 40026070 - 40026111
Alignment:
Q  9 tgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    |||||| |||| |||||||||||||||||| |||||||||||    
T  40026070 tgtttgaatgggggaatattttgaggtaatataatgttttga 40026111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 302
Target Start/End: Original strand, 6452432 - 6452535
Alignment:
Q  199 aggatatgataaaactatcatatcctaatttaatttgatg-tttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaatcacc 297  Q
    |||||||||||||| |||| ||||| ||||||| |  ||| |||| |||||||||| || | ||||| ||||||||||| |||||  ||||||| ||||     
T  6452432 aggatatgataaaattatcctatcc-aatttaaatccatggtttgatgcaccaataagatatgataaattaaacctattactaatcttatcctattcacg 6452530  T
Q  298 ctttg 302  Q
    |||||    
T  6452531 ctttg 6452535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 44255718 - 44255674
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaaca 122  Q
    |||||||||||||||||| ||||| | |||||||| |||||||||    
T  44255718 caaacaatagaattcaccccaaagtatttgaattctctcaaaaca 44255674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 2e-46; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 31070546 - 31070424
Alignment:
Q  22 gaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaac 121  Q
    |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  31070546 gaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaac 31070447  T
Q  122 attacattctctcaaaatattcc 144  Q
    ||||||||| ||||||| |||||    
T  31070446 attacattccctcaaaacattcc 31070424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 46429553 - 46429434
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  46429553 agtgtgtttggatgagggaatattttgaggtaatgtaatgttttgaaggaattcaattattttgaggtggattcaaacaatagaattcaccttaaagtag 46429454  T
Q  105 ttgaattcgctcaaaacatt 124  Q
    |||||||| |||||||||||    
T  46429453 ttgaattccctcaaaacatt 46429434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 44692979 - 44692822
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||   ||||||| || ||||||||| |||||||||||||||||||||| ||||  |    
T  44692979 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtgg 44692880  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| ||||||||||||| ||| ||||||| |||||  |||||||| |||||||    
T  44692879 ttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacacactct 44692822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 9129501 - 9129342
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||  ||||| |||||||| |||||||||||||||   ||||||| || ||||||||| ||||||||||||||||||| || |||| ||    
T  9129501 agtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtag 9129402  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    ||||||||  |||||||||||||||| ||||||||| ||   |||||||| |||||||||    
T  9129401 ttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacactctta 9129342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 9137608 - 9137449
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||  ||||| |||||||| |||||||||||||||   ||||||| || ||||||||| ||||||||||||||||||| || |||| ||    
T  9137608 agtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtag 9137509  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    ||||||||  |||||||||||||||| ||||||||| ||   |||||||| |||||||||    
T  9137508 ttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacactctta 9137449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 39215999 - 39215888
Alignment:
Q  1 ttatagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaa 100  Q
    ||||||||||||||||||   ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||    
T  39215999 ttatagtgtgtttggatgagagaatattttgaggtaatataatgttttgagaaaattcaattattttgaggtggattcaaacaataaaattcacctcaaa 39215900  T
Q  101 gaagttgaattc 112  Q
    | | ||||||||    
T  39215899 gtaattgaattc 39215888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 47284383 - 47284268
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||   |||||||||||||||||||||||||||||   ||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  47284383 agtgtgtttggatgagagaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggttgattcaaacaatagaattcacctcaaagtag 47284284  T
Q  105 ttgaattcgctcaaaa 120  Q
     ||||||| |||||||    
T  47284283 ctgaattccctcaaaa 47284268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 5415785 - 5415942
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||| | |||||||||||||| |||||||||||||||   ||||||| || ||| |||||  | ||||||||||||||||||| |||| ||    
T  5415785 agtgtgtttggataggggaatattttgagggaatgtaatgttttgagggaattcaactactttaaggtgagtacaaacaatagaattcaccttaaagtag 5415884  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||||||  |||||||||||| ||| |||||||||||||  |||||||| |||||||    
T  5415885 ttgaattccatcaaaacattactttccctcaaaatattcccccatccaaacacactct 5415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 28092220 - 28092335
Alignment:
Q  9 tgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttga 108  Q
    ||||||||||| ||||| |||||||| ||||| |||||||||   |||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||    
T  28092220 tgtttggatgggggaatgttttgaggaaatgtgatgttttgagggaattcaattactttgaggtgaattcaaacaatagaattcacctcaaaacagttga 28092319  T
Q  109 attcgctcaaaacatt 124  Q
    |||| |||||||||||    
T  28092320 attccctcaaaacatt 28092335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 36 - 166
Target Start/End: Complemental strand, 44436384 - 44436254
Alignment:
Q  36 aatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctca 135  Q
    |||||||||||||||   ||||||| || ||||||||| |||||||||||||||||||||| |||  |||||||||  ||||||||||||||||| ||||    
T  44436384 aatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaaatagttgaatttcctcaaaacattacattccctca 44436285  T
Q  136 aaatattccgtcatccaaagacactcttagg 166  Q
    ||| |||||  |||||||| |||||||||||    
T  44436284 aaacattcccccatccaaacacactcttagg 44436254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 9129346 - 9129505
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    |||||||||||||||  || |||||||||| |||||||||||||||   ||||||| || ||| || || |||| |    | ||||||||||||||| ||    
T  9129346 agtgtgtttggatgggagactattttgagggaatgtaatgttttgatggaattcaactactttaagttgaattctattgtttgaattcacctcaaagtag 9129445  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    |||||||| ||||||||||||||||| ||||||| ||||| ||||||||| |||||||||    
T  9129446 ttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 9129505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 9137453 - 9137612
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    |||||||||||||||  || |||||||||| |||||||||||||||   ||||||| || ||| || || |||| |    | ||||||||||||||| ||    
T  9137453 agtgtgtttggatgggagactattttgagggaatgtaatgttttgatggaattcaactactttaagttgaattctattgtttgaattcacctcaaagtag 9137552  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    |||||||| ||||||||||||||||| ||||||| ||||| ||||||||| |||||||||    
T  9137553 ttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 9137612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 42130692 - 42130819
Alignment:
Q  3 atagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaaga 102  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||||   ||||||||||| || | ||||||||||| | |||||||||||||||||     
T  42130692 atagtgtgtttgggtgggggaatattttgaggtgatgtaatgttttgagggaattcaattatctttaagtggattcaaagagtagaattcacctcaaagt 42130791  T
Q  103 agttgaattcgctcaaaacattacattc 130  Q
    | |||||||| || |||| |||||||||    
T  42130792 aattgaattccctaaaaagattacattc 42130819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 168
Target Start/End: Original strand, 44692824 - 44692987
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| ||||| |||||||| || ||||||||||||   |||||||  | ||| ||||| |||| |    | ||||||||||||||| ||    
T  44692824 agtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtag 44692923  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggt 168  Q
    |||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||||||||||    
T  44692924 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactcttagggt 44692987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 27252051 - 27251932
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| || || |||||||| |||||||||||||||   ||||||| || ||||||||| ||||||||||||||||||| || |||| ||    
T  27252051 agtgtgtttggatggggggatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtag 27251952  T
Q  105 ttgaattcgctcaaaacatt 124  Q
    |||||||| || ||||||||    
T  27251951 ttgaattcccttaaaacatt 27251932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 44436260 - 44436384
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||   ||||||| |||||| ||||| |||| |    | ||||||||||||||| ||    
T  44436260 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactattttaaggtgaattctattgtttgaattcacctcaaagtag 44436359  T
Q  105 ttgaattcgctcaaaacattacatt 129  Q
    |||||||| ||||||||||||||||    
T  44436360 ttgaattccctcaaaacattacatt 44436384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 5415940 - 5415782
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| |||||||||||||| || ||||||||||||   ||||||| || ||| ||||| |||| |    | | | |||||| |||| ||    
T  5415940 agtgtgtttggatgggggaatattttgagggaaagtaatgttttgatggaattcaactactttaaggtgaattctattgtttgtactcaccttaaagtag 5415841  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctt 163  Q
    |||||||| ||||||||||||||||| |||||||||||||   ||||||| ||||||||    
T  5415840 ttgaattccctcaaaacattacattccctcaaaatattcccctatccaaacacactctt 5415782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 162
Target Start/End: Original strand, 46672799 - 46672875
Alignment:
Q  86 agaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||||||||||| |||||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  46672799 agaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 46672875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 82 - 166
Target Start/End: Complemental strand, 49457423 - 49457339
Alignment:
Q  82 caatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 166  Q
    ||||||||||||||| ||||  ||||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||||||||    
T  49457423 caatagaattcaccttaaagtggttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcttagg 49457339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 27251978 - 27252057
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 166  Q
    ||||||||||||||| |||||||||| ||||||||||||||||| ||||||| || ||  |||||||| |||||||||||    
T  27251978 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatccccccatccaaacacactcttagg 27252057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 7302430 - 7302344
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    |||||||| ||||||||||||| | |  |||||||  |||||||||||||||||||||||| ||||| ||||||||| |||||||||    
T  7302430 caaacaatggaattcacctcaaggtatctgaattccttcaaaacattacattctctcaaaacattccctcatccaaacacactctta 7302344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 291
Target Start/End: Original strand, 32490872 - 32490964
Alignment:
Q  199 aggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 291  Q
    |||||||||||| |||||||||| ||| || |||    ||||||||||||||||| |||||||||||  ||||||||| ||||||||||||||    
T  32490872 aggatatgataacactatcatattctatttaaatcctttgtttggtgcaccaatatgaaaggataatcgaaacctattgctaattctatccta 32490964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 165
Target Start/End: Original strand, 53129831 - 53129918
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    |||||||| ||||||||| ||||| | |||||||| || |||||||||||||| ||| ||| ||||| ||||||||| ||||||||||    
T  53129831 caaacaatggaattcaccccaaagtatttgaattcccttaaaacattacattccctcgaaacattccctcatccaaacacactcttag 53129918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 332012 - 332096
Alignment:
Q  41 aatgttttgaaataattcaattattttgaggtggattcaaa-caatagaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    ||||||||||   ||||||| || ||||||||| ||||||| ||||||||||||||| |||| |||||||||| |||||||||||    
T  332012 aatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 332096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 21307520 - 21307596
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaa 154  Q
    |||||||| ||||||||||||||| | |||||||| ||||||||||||||||| | ||||| |||||  ||||||||    
T  21307520 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattcccgcaaaacattcccccatccaaa 21307596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 143
Target Start/End: Original strand, 31070415 - 31070546
Alignment:
Q  11 tttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaat 110  Q
    ||||||||| ||||| |||||||| |||||||||||||||   ||||||| || ||||||||| |||| |    | |||| |||||||||  | ||||||    
T  31070415 tttggatgg-ggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaat 31070513  T
Q  111 tcgctcaaaacattacattctctcaaaatattc 143  Q
    || ||||||||||||||||  ||||||||||||    
T  31070514 tccctcaaaacattacattacctcaaaatattc 31070546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 46672873 - 46672772
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||   ||||||| || ||||||||| ||||      | ||||||||||||||| ||    
T  46672873 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc------ttgaattcacctcaaagtag 46672780  T
Q  105 ttgaattc 112  Q
    ||||||||    
T  46672779 ttgaattc 46672772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 39110469 - 39110394
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||||| ||||||| |||||||||| | ||||||||||||||| ||||||| ||| | ||||||||| |||||||    
T  39110469 gaattcaactcaaagtagttgaattcccacaaaacattacattcgctcaaaacatttcttcatccaaacacactct 39110394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 48936451 - 48936355
Alignment:
Q  193 gaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 291  Q
    ||||| |||||||||||| |||||||||||||  || |||  | ||||||||||||||| |||||  |||||||||||||| ||| |||| ||||||||    
T  48936451 gaagacaggatatgataagactatcatatcctgtttcaatccgttgtttggtgcaccaacaggaa--gataatttaaacctgtttttaatcctatccta 48936355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 46001366 - 46001408
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttt 47  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  46001366 agtgtgtttggatggcggaatattttgaggtaatgtaatgttt 46001408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 39110396 - 39110485
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcac 94  Q
    |||||||||||||| || ||| |||||||  ||||||||||||||    ||||||| || |||||| || ||||||||||||||||||||    
T  39110396 agtgtgtttggatgaagaaatgttttgagcgaatgtaatgttttgtgggaattcaactactttgagttgaattcaaacaatagaattcac 39110485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 42005941 - 42006030
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttaggg 167  Q
    ||||||||  |||||||||||| | | || |||||  |||||||||||||||| ||||||| |||||  |||||||| ||||||||||||    
T  42005941 caaacaatgaaattcacctcaaggtatttaaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactcttaggg 42006030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 44288533 - 44288484
Alignment:
Q  1 ttatagtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||||||||    
T  44288533 ttatagtatgtttggatggaggaatgttttgaggtaatataatgttttga 44288484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 168
Target Start/End: Original strand, 46429480 - 46429561
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggt 168  Q
    |||| |||||||||  | ||||||||  |||||||||||||||  ||||||||||||| ||||||||| ||||||| |||||    
T  46429480 gaatccacctcaaaataattgaattccttcaaaacattacattacctcaaaatattccctcatccaaacacactctaagggt 46429561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 19475900 - 19475824
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaa 154  Q
    |||||||| ||||||||||||||| | |||||||  |||| |||||||||||| ||||||| |||||  ||||||||    
T  19475900 caaacaatggaattcacctcaaagtatttgaattacctcataacattacattccctcaaaacattcctccatccaaa 19475824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 47767516 - 47767432
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||||||  |||||||||||| | | ||||||||  |||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  47767516 caaacaatgtaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 47767432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 47767434 - 47767502
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtg 73  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||||||  ||||||| ||  ||||||||    
T  47767434 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtg 47767502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 19475824 - 19475891
Alignment:
Q  11 tttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    ||||||||||||||| |||||||| ||||||||||| |||  |||||||| || ||||||||| ||||    
T  19475824 tttggatggaggaatgttttgagggaatgtaatgttatgaggtaattcaaatactttgaggtgaattc 19475891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 37321625 - 37321550
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||||| |||| |||||||||  ||||||||||||| ||  |||||||||||||  |||||||| |||||||    
T  37321625 gaattcaccttaaagtagttgaatttcctcaaaacattacttttcctcaaaatattcccccatccaaatacactct 37321550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 276
Target Start/End: Complemental strand, 45818758 - 45818671
Alignment:
Q  189 ataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatt 276  Q
    ||||||||| |||||||||||| |||||||||||||| || |||  | ||||||||||| || ||| ||| |||||  ||||||||||    
T  45818758 ataagaagacaggatatgataacactatcatatcctacttaaatccgttgtttggtgcatcagtagcaaaagataaaataaacctatt 45818671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 46001420 - 46001361
Alignment:
Q  106 tgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    ||||||| ||| ||||||||||||  |||||||||||||| |||||||| ||||||||||    
T  46001420 tgaattccctcgaaacattacattacctcaaaatattccgccatccaaacacactcttag 46001361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 30766637 - 30766571
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattcc 144  Q
    |||||||| ||||||||||||| | | ||||||||  |||||||||||||||| ||||||| |||||    
T  30766637 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcc 30766571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 42006023 - 42005977
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaa 51  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  42006023 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaa 42005977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 32795014 - 32794945
Alignment:
Q  214 tatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaatt 283  Q
    ||||||||||| |||||||||| || ||||||||| ||||  ||| |||||||||||  |||||||||||    
T  32795014 tatcatatcctgatttaatttgttggttggtgcactaataaaaaatgataatttaaatttatttctaatt 32794945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 39795383 - 39795330
Alignment:
Q  201 gatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaatag 254  Q
    |||||||||| |||||||||||||| || ||| || ||||||||||||||||||    
T  39795383 gatatgataacactatcatatcctacttaaatatgttgtttggtgcaccaatag 39795330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 47284328 - 47284385
Alignment:
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| ||||||||||||||||  ||||||||||||  ||||||||| |||||||    
T  47284328 ttgaattccctcaaaacattacattacctcaaaatattctctcatccaaacacactct 47284385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 48947607 - 48947680
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    |||||||||||||||| |||| |||||||| |||||| |||||||| | ||||||| || |||| |||| ||||    
T  48947607 agtgtgtttggatggaagaatgttttgagggaatgtattgttttgagagaattcaaatactttggggtgaattc 48947680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 49457345 - 49457390
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||    
T  49457345 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 49457390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 31189385 - 31189469
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||| ||| |||| ||||||||| | |||||||| ||||||||||||||||  ||||||| ||||  |||| |||| |||||||    
T  31189385 caaacgataaaatttacctcaaagtatttgaattctctcaaaacattacattacctcaaaacattctctcattcaaacacactct 31189469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 37054478 - 37054394
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||||||  |||||||||||| | | ||||||||  |||||||||||||||| || |||| |||||  |||||||| |||||||    
T  37054478 caaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattcccttaaaacattcccccatccaaacacactct 37054394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 37054396 - 37054464
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtg 73  Q
    ||||||||||||||| ||||| |||| ||| ||||||||||||||||  ||||||| ||  ||||||||    
T  37054396 agtgtgtttggatgggggaatgttttaagggaatgtaatgttttgaaggaattcaaataccttgaggtg 37054464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 165
Target Start/End: Complemental strand, 40929704 - 40929605
Alignment:
Q  65 tttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    ||||||||| |||||||||||||||||||  | |||  |||||||||  |||  ||||||| ||||||| |||| |||||  |||||||| |||||||||    
T  40929704 tttgaggtgaattcaaacaatagaattcatattaaaatagttgaattttctccgaacattatattctctgaaaacattcc-ccatccaaacacactctta 40929606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 21307600 - 21307529
Alignment:
Q  7 tgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    ||||||||||||| ||||| ||||| || |||||||||||||||   ||||||| || ||||||||| ||||    
T  21307600 tgtgtttggatgggggaatgttttgcgggaatgtaatgttttgagggaattcaaatactttgaggtgaattc 21307529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 25655335 - 25655418
Alignment:
Q  41 aatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    ||||||||||   ||||||| || |||||| || ||||||| ||||||||||| || |||| ||||||||||  ||||||||||    
T  25655335 aatgttttgagggaattcaactactttgagttgaattcaaataatagaattcaacttaaagtagttgaattccgtcaaaacatt 25655418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 28092289 - 28092222
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaa 154  Q
    ||||||||||||||| | |||||||| |||||||||| |||||  ||||||| |||||  ||||||||    
T  28092289 gaattcacctcaaagtaattgaattccctcaaaacatcacatttcctcaaaacattcccccatccaaa 28092222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 31189467 - 31189400
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggt 72  Q
    |||||||||| |||   |||| |||||||||||||||||||||||| | ||||||| || ||||||||    
T  31189467 agtgtgtttgaatgagagaatgttttgaggtaatgtaatgttttgagagaattcaaatactttgaggt 31189400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 35279970 - 35279927
Alignment:
Q  7 tgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||| ||||| |||||||| |||||||||||||||    
T  35279970 tgtgtttggatgggggaatgttttgagggaatgtaatgttttga 35279927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 35279920 - 35279978
Alignment:
Q  108 aattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 166  Q
    ||||| ||||||||||||||||| ||||||| |||||  |||||||| ||| |||||||    
T  35279920 aattcactcaaaacattacattccctcaaaacattcccccatccaaacacattcttagg 35279978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 40416911 - 40417009
Alignment:
Q  193 gaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 291  Q
    ||||| ||||||||| ||||||||||||||||  || |||  | ||||||||||| ||| || ||| ||||| |||||  ||||| |||| ||||||||    
T  40416911 gaagacaggatatgaaaaaactatcatatcctgcttcaatccgttgtttggtgcatcaacagaaaatgataaattaaatatatttttaatcctatccta 40417009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Complemental strand, 332049 - 332012
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  332049 gaattcacctcaaagtagttgaattccctcaaaacatt 332012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 7976632 - 7976567
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattc 143  Q
    |||||||||||||||||||||| | | || |||||  ||||||||||||||||  |||||| ||||    
T  7976632 caaacaatagaattcacctcaatgtatttaaattccttcaaaacattacattccttcaaaacattc 7976567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 8762210 - 8762153
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctca 135  Q
    |||||||| |||||||| |||||| | |||||||| |||| ||||||||||| |||||    
T  8762210 caaacaatggaattcacatcaaagtatttgaattccctcataacattacattatctca 8762153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 34088573 - 34088618
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||||| ||| |||||||| |||||| ||||||||    
T  34088573 agtgtgtttggatggagaaatgttttgagggaatgtattgttttga 34088618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 36398059 - 36398014
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||| ||||| |||||||| |||||| ||||||||    
T  36398059 agtgtgtttggatgggggaatgttttgagggaatgtattgttttga 36398014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 37321552 - 37321597
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||| ||||||||| |||||||||||||| || ||||||||||||    
T  37321552 agtgtatttggatgggggaatattttgaggaaaagtaatgttttga 37321597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 38506861 - 38506910
Alignment:
Q  75 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    ||||||||||| ||||||||||||||  | |||||||| |||||||||||    
T  38506861 attcaaacaatggaattcacctcaaattatttgaattccctcaaaacatt 38506910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 307
Target Start/End: Original strand, 38457762 - 38457814
Alignment:
Q  255 gaaaggataatttaaacctatttctaattctatcctaatcaccctttgctact 307  Q
    |||||||||||||||||  ||||||||| |||||||| ||||| |||| ||||    
T  38457762 gaaaggataatttaaactcatttctaatcctatcctattcaccttttgttact 38457814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 222
Target Start/End: Complemental strand, 44764204 - 44764176
Alignment:
Q  194 aagataggatatgataaaactatcatatc 222  Q
    |||||||||||||||||||||||||||||    
T  44764204 aagataggatatgataaaactatcatatc 44764176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 3e-42; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 15373962 - 15374121
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    |||||||||||||||| |||| |||||||| |||||||||||||||   ||||||| || ||||||||| |||||||||||||||||||||| | || ||    
T  15373962 agtgtgtttggatggaagaattttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttagagtag 15374061  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    |||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||||||    
T  15374062 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 15374121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 9764495 - 9764335
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||   ||||||| || |||||||||  ||||||||||||||||||||| |||| ||    
T  9764495 agtgtgtttggatgggggaatgtttcgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtag 9764396  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    |||||||| ||||||||||||| ||| |||||||||||||  |||||||| ||||||||||    
T  9764395 ttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactcttag 9764335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 20523135 - 20523291
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    |||||||||||||||  |||| |||||||| |||||||| || |||   ||||||| || ||||||||| |||||||||||||||||||||| |||| ||    
T  20523135 agtgtgtttggatgggagaatgttttgagggaatgtaatattctgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtag 20523234  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactc 161  Q
    |||||||| ||||||||||||||||||||||||| |||||  |||||||| ||||||    
T  20523235 ttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacactc 20523291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 2316535 - 2316376
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacc-tcaaagaa 103  Q
    ||||||||||||||||  ||| |||||||| ||||||||||||||| | ||||||| || ||||||||| ||||||||||||||||||||| | |||| |    
T  2316535 agtgtgtttggatggaa-aatgttttgagggaatgtaatgttttgagagaattcaactactttgaggtgaattcaaacaatagaattcacctttaaagta 2316437  T
Q  104 gttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    ||||||||| ||||||| ||||||||| ||||||| |||||  |||||||| |||||||||    
T  2316436 gttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacacactctta 2316376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 28828508 - 28828417
Alignment:
Q  1 ttatagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattc 92  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  28828508 ttatagtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattc 28828417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 6634017 - 6634170
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| || |||||||||||||||||||||||||||   ||||||||||||| || ||| ||||||||||||||||||||||||||| ||    
T  6634017 agtgtgtttggatggggggatattttgaggtaatgtaatgttttgagggaattcaattatttcga-gtgaattcaaacaatagaattcacctcaaagtag 6634115  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacac 159  Q
    ||||| ||  | |||| ||||||||| ||| |||| ||||  |||||||| ||||    
T  6634116 ttgaactcctttaaaatattacattccctcgaaatgttcccccatccaaacacac 6634170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 160
Target Start/End: Complemental strand, 32390129 - 32389974
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    |||||||||||||    |||| |||||||| |||||||||||||||   ||||||| || ||||||||| ||||||| |||||||||||||| | || ||    
T  32390129 agtgtgtttggattagagaattttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaataatagaattcaccttagagtag 32390030  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 160  Q
    |||||||| ||||||| |||||||||  |||||| ||||| ||||||||| |||||    
T  32390029 ttgaattccctcaaaatattacattccttcaaaacattccctcatccaaacacact 32389974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 40809343 - 40809476
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| | ||| |||||||  ||| |||||||||||   ||||||| || |||||| || |||||||||||| ||||||||| |||| ||    
T  40809343 agtgtgtttggatggggaaatgttttgagagaatataatgttttgagggaattcaactactttgagttgaattcaaacaataaaattcaccttaaagtag 40809442  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaa 138  Q
     ||||||| |||||||||||||||||||||||||    
T  40809443 ctgaattcactcaaaacattacattctctcaaaa 40809476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 9764340 - 9764497
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| |||||||||||||| || ||||||||||||   ||||||| || ||| ||||| |||| |    | ||| ||||||||||| ||    
T  9764340 agtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagtag 9764439  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| ||||||||||||||||| ||| ||| |||||  |||||||| |||||||    
T  9764440 ttgaattccctcaaaacattacattccctcgaaacattcccccatccaaacacactct 9764497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 15374117 - 15373960
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||   ||||||| || | | ||||| |||| |    | ||||||||||||||| ||    
T  15374117 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcacctcaaagtag 15374018  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| ||||||||||||||||| ||||||| ||||   |||||||| |||||||    
T  15374017 ttgaattccctcaaaacattacattccctcaaaaaattcttccatccaaacacactct 15373960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 32470884 - 32471015
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||| ||||||||||| ||| |||||||| ||||||||||||||||  ||||||| |||||| ||||  |||| |  | | ||||||| ||||||| ||    
T  32470884 agtgtatttggatggagaaatgttttgagggaatgtaatgttttgaaggaattcaactattttaaggtaaattctattatttgaattcaactcaaagtag 32470983  T
Q  105 ttgaattcgctcaaaacattacattctctcaa 136  Q
    |||||||| ||||||||||||||||| |||||    
T  32470984 ttgaattccctcaaaacattacattccctcaa 32471015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 169
Target Start/End: Original strand, 37722880 - 37722971
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggtc 169  Q
    |||||||| ||||||||||||||| | |||||||| ||||||||||||||||| |||||||||||||  |||||||| ||||||| ||||||    
T  37722880 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaatattcccccatccaaacacactctaagggtc 37722971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 16515099 - 16515180
Alignment:
Q  84 atagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| || |||| ||||  ||||||||| ||||||||||    
T  16515099 atagaattcacctcaaagaagttgaattccctcaaaacattacattccctaaaaacattctctcatccaaacacactcttag 16515180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 32471015 - 32470878
Alignment:
Q  29 ttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacat 128  Q
    |||||| |||||||||||||||   ||||||| || |||||| || ||||||| ||||||||| |||| |||  ||||||||||  ||||||||||||||    
T  32471015 ttgagggaatgtaatgttttgagggaattcaactactttgagttgaattcaaataatagaatttaccttaaaatagttgaattccttcaaaacattacat 32470916  T
Q  129 tctctcaaaatattccgtcatccaaagacactcttagg 166  Q
    || ||||||| ||| |  |||||||| |||||||||||    
T  32470915 tccctcaaaacatttctccatccaaatacactcttagg 32470878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 41 - 166
Target Start/End: Original strand, 40643856 - 40643980
Alignment:
Q  41 aatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 140  Q
    ||||||||||   ||||||| || |||||| |  |||||||||||||||||||||| ||| | ||||||||| ||||||||||||||||| ||||||| |    
T  40643856 aatgttttgagggaattcaactactttgagttaaattcaaacaatagaattcaccttaaata-gttgaattccctcaaaacattacattccctcaaaaca 40643954  T
Q  141 ttccgtcatccaaagacactcttagg 166  Q
    ||||  |||||||| |||||||||||    
T  40643955 ttcccccatccaaacacactcttagg 40643980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 32389974 - 32390134
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||  ||||| |||||| | |||||||| ||||||   ||||||| || | | ||||| |||| |  | | ||||||||||||||| ||    
T  32389974 agtgtgtttggatgagggaatgttttgaaggaatgtaatattttgagggaattcaactactctaaggtgaattctattatttgaattcacctcaaagtag 32390073  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    |||||||| ||||||||||||||||| ||||||| ||||  | ||||||| ||||||||||    
T  32390074 ttgaattccctcaaaacattacattccctcaaaaaattctctaatccaaacacactcttag 32390134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 23092119 - 23091980
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| ||||| ||||||   |||||||||||||||   | ||||| || ||| || || ||||| | ||||||||||| || |||| ||    
T  23092119 agtgtgtttggatgggggaatgttttgaacgaatgtaatgttttgagggagttcaactactttcagatgaattcagaaaatagaattcaacttaaagtag 23092020  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattcc 144  Q
    ||||||||  |||||||||||||||| |||||||||||||    
T  23092019 ttgaattccttcaaaacattacattccctcaaaatattcc 23091980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 20523290 - 20523133
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| ||||| |||||||  |||||||||||||||   ||||||| || ||| ||||| |||| |    | ||||||||||||||| ||    
T  20523290 agtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtag 20523191  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| |||| || ||||||||| ||||||| ||||   |||||||| |||||||    
T  20523190 ttgaattccctcagaatattacattccctcaaaacattctcccatccaaacacactct 20523133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 34731234 - 34731330
Alignment:
Q  195 agataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 291  Q
    |||||||||||||||| |||||||||||||| || |||    ||||||||||||||||||||||||||||  ||||||||||  |||| ||||||||    
T  34731234 agataggatatgataacactatcatatcctatttaaatcccttgtttggtgcaccaataggaaaggataaactaaacctattgttaatcctatccta 34731330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 2316380 - 2316514
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttga-ggtggattcaaacaatagaattcacctcaaagaa 103  Q
    ||||||||||||||| ||||| |||||||| |||||||| ||||||   ||||||| || ||| | |||| |||| |    | ||||||||||||||| |    
T  2316380 agtgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattcaactactttaaaggtgaattctattgtttgaattcacctcaaagta 2316479  T
Q  104 gttgaattcgctcaaaacattacattctctcaaaa 138  Q
    ||||||||| ||||||||||||||||| |||||||    
T  2316480 gttgaattctctcaaaacattacattccctcaaaa 2316514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 3563364 - 3563278
Alignment:
Q  75 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactc 161  Q
    |||||| ||||||||||||||| |||| |||||||||| ||||||||||||||||| ||||||| |||||   ||||||| ||||||    
T  3563364 attcaagcaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatccaaacacactc 3563278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13243565 - 13243516
Alignment:
Q  1 ttatagtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13243565 ttatagtgtgtttggatgggggaatattttgaggtaatgtaatgttttga 13243516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 22767036 - 22766952
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||||||||||||||||| |||| | |||||||| |||||||||||| |||| ||||||| |||||  |||||||| |||||||    
T  22767036 caaacaatagaattcaccttaaagtatttgaattccctcaaaacattatattccctcaaaacattcccccatccaaacacactct 22766952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 40809416 - 40809336
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttaggg 167  Q
    ||||||| ||||||| |||||||||| |||||||||||| |||||||||||| ||| |  |||||||| ||||||||||||    
T  40809416 gaattcaactcaaagtagttgaattccctcaaaacattatattctctcaaaacatttccccatccaaacacactcttaggg 40809336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 2721557 - 2721628
Alignment:
Q  89 attcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 160  Q
    ||||||||||||| |||||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||    
T  2721557 attcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 2721628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 23091965 - 23092123
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||| ||||| |||||||||||||| ||||||||||||||||  ||||||| || ||| || || |||| |      ||||||| || |||| ||    
T  23091965 agtgtgttttgatgg-ggaatattttgagggaatgtaatgttttgaaggaattcaactactttaagttgaattctattttctgaattcatctgaaagtag 23092063  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    ||||| || |||||||||||||||||  |||||| |||||  |||||||| |||||||||    
T  23092064 ttgaactccctcaaaacattacattcgttcaaaacattcccccatccaaacacactctta 23092123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 165
Target Start/End: Original strand, 25935276 - 25935363
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    |||||||| ||||||||||||||| | |||||||  |||| |||||||||||| ||||||| |||||  |||||||| ||||||||||    
T  25935276 caaacaatggaattcacctcaaagtatttgaatttcctcataacattacattccctcaaaacattcccccatccaaacacactcttag 25935363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 165
Target Start/End: Original strand, 40090400 - 40090487
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    |||||||| ||||||||||||||| | ||||||||  |||||||||||||||  ||||||| |||||  |||||||| ||||||||||    
T  40090400 caaacaatggaattcacctcaaagtatttgaattccatcaaaacattacatttcctcaaaacattcccccatccaaacacactcttag 40090487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 143
Target Start/End: Complemental strand, 16515081 - 16515023
Alignment:
Q  85 tagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattc 143  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| ||||||| ||||    
T  16515081 tagaattcacctcaaagaagttgaattccctcaaaaccttacattccctcaaaacattc 16515023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 26281262 - 26281339
Alignment:
Q  85 tagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||||||| |||| |||||||||| ||||||||||||||||| |||||||  ||||  |||||||| |||||||    
T  26281262 tagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacgttcccccatccaaacacactct 26281339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 37722962 - 37722889
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||   ||||||| || ||||||||| ||||    
T  37722962 agtgtgtttggatgggggaatattttgagggaatgtaatgttttgagggaattcaaatactttgaggtgaattc 37722889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 162
Target Start/End: Complemental strand, 35379423 - 35379344
Alignment:
Q  82 caatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||| ||||||| |||||||| |||||||| |||||||||||||||| |||||||| |||||  |||||||| |||||||    
T  35379423 caataaaattcacttcaaagaatttgaattccctcaaaacattacattatctcaaaacattcc-ccatccaaacacactct 35379344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 41762201 - 41762289
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 166  Q
    |||||||| ||||||||| ||||| | |||||||| || |||||| ||||||| ||||||| |||||  |||||||| |||||||||||    
T  41762201 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactcttagg 41762289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 19533978 - 19533907
Alignment:
Q  2 tatagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtg 73  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| |||   ||||||| || |||||||||    
T  19533978 tatagtgtgtttggatggaggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtg 19533907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 2721630 - 2721560
Alignment:
Q  3 atagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtg 73  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||||||   ||||||| || |||||||||    
T  2721630 atagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtg 2721560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 19533893 - 19533975
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 160  Q
    ||||||||  |||||||||||||| | |||||||| |||| |||||||||||| ||||||| |||||  |||||||| |||||    
T  19533893 caaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcctccatccaaacacact 19533975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 40090482 - 40090409
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||   ||||||| || ||||||||| ||||    
T  40090482 agtgtgtttggatgggggaatgttttgaggaaatgtaatgttttgatggaattcaaatactttgaggtgaattc 40090409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 22303856 - 22303940
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||||||  |||||||||||| | | ||||||||  |||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  22303856 caaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 22303940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 22303938 - 22303870
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtg 73  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||||||  ||||||| ||  ||||||||    
T  22303938 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtg 22303870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 37145487 - 37145563
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaa 154  Q
    ||||||||  |||||||||||||| | |||||||| |||| |||||||||||| ||||||| |||||  ||||||||    
T  37145487 caaacaatgaaattcacctcaaagtatttgaattctctcataacattacattccctcaaaacattcccccatccaaa 37145563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 165
Target Start/End: Complemental strand, 6634170 - 6634012
Alignment:
Q  6 gtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagt 105  Q
    |||||||||||||| |||| |||| |||| |||||||| |||| ||  | ||||| || ||||||||| |||| |    | ||||||||   ||| || |    
T  6634170 gtgtgtttggatgggggaacatttcgagggaatgtaatattttaaaggagttcaactactttgaggtgaattctattgtttgaattcactcgaaataa-t 6634072  T
Q  106 tgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    ||||||| ||||||||||||||||  |||||||||| ||  |||||||| ||||||||||    
T  6634071 tgaattccctcaaaacattacattacctcaaaatatccccccatccaaacacactcttag 6634012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 40643974 - 40643856
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||   ||||||| || ||| ||||| |||| |    | ||||| | ||||||| ||    
T  40643974 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaacta-tttaaggtgaattctattgtttgaatttaactcaaagtag 40643876  T
Q  105 ttgaattcgctcaaaacatt 124  Q
    |||||||| |||||||||||    
T  40643875 ttgaattccctcaaaacatt 40643856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 22305178 - 22305132
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    |||||||| ||||||||||||||| |||||||||| |||||||||||    
T  22305178 caaacaatggaattcacctcaaagtagttgaattccctcaaaacatt 22305132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 32250084 - 32250169
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    |||||||| ||||||| ||||| | | |||||||| ||||||||||||| ||| ||||||| |||||  |||||||| |||||||||    
T  32250084 caaacaatggaattcatctcaaggtatttgaattccctcaaaacattactttccctcaaaacattcc-ccatccaaacacactctta 32250169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 15270837 - 15270886
Alignment:
Q  75 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    ||||||||||| ||||||||||||||| | |||||||| |||||||||||    
T  15270837 attcaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 15270886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 17542344 - 17542393
Alignment:
Q  75 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    ||||||||||| ||||||||||||||| | |||||||| |||||||||||    
T  17542344 attcaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 17542393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 25935358 - 25935285
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    ||||||||||||||| ||||| |||||||| ||||||||||| |||   ||||||| || ||||||||| ||||    
T  25935358 agtgtgtttggatgggggaatgttttgagggaatgtaatgttatgaggaaattcaaatactttgaggtgaattc 25935285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 28828369 - 28828414
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||    
T  28828369 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 28828414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 9894308 - 9894384
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaa 154  Q
    |||||||| ||||||||||||||| | |||||||| ||   |||||||||||| ||||||| |||||  ||||||||    
T  9894308 caaacaatggaattcacctcaaagtatttgaattccctggtaacattacattccctcaaaacattcccccatccaaa 9894384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 13243514 - 13243451
Alignment:
Q  107 gaattcgctcaaaacattacattctctcaaaatattccgtcatc--caaagacactcttagggt 168  Q
    |||||| ||||||||||||||||| ||||||| ||||| |||||  |||| |||||||||||||    
T  13243514 gaattccctcaaaacattacattccctcaaaacattccctcatccacaaacacactcttagggt 13243451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 15804324 - 15804400
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaa 81  Q
    ||||||||||||||| ||||| |||||||| |||||| ||||||||   ||||||| || |||||| || |||||||    
T  15804324 agtgtgtttggatgggggaatgttttgagggaatgtagtgttttgagggaattcaactactttgagttgaattcaaa 15804400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 282
Target Start/End: Complemental strand, 32529534 - 32529439
Alignment:
Q  189 ataagaagataggatatgataaaactatcatat--cctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaat 282  Q
    ||||||||| | |||||||||||||||||||||  | || || |||  | |||||||||||||||||  |||| |||| |||||| ||||||||||    
T  32529534 ataagaagacaagatatgataaaactatcatatatcttacttcaatccgctgtttggtgcaccaataaaaaagaataaattaaacttatttctaat 32529439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 166
Target Start/End: Original strand, 33245366 - 33245446
Alignment:
Q  86 agaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 166  Q
    |||||||| || |||| |||||||||  |||||||||||||||||  |||||| |||||  |||||||| |||||| ||||    
T  33245366 agaattcaacttaaagtagttgaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactcatagg 33245446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 34982288 - 34982209
Alignment:
Q  89 attcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggtc 169  Q
    |||||||| ||||  ||||||||| |||||||||| |||||| ||||||| |||||   ||||||| ||||||||||||||    
T  34982288 attcaccttaaagtggttgaattccctcaaaacat-acattccctcaaaacattcccctatccaaacacactcttagggtc 34982209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 37145569 - 37145501
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtg 73  Q
    |||| |||||||||| ||||| |||||||| ||||||||||| ||| | ||||||| || |||||||||    
T  37145569 agtgggtttggatgggggaatgttttgagggaatgtaatgttatgagagaattcaaatactttgaggtg 37145501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 5658778 - 5658821
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgtttt 48  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||    
T  5658778 agtgtgtttggatggagaaatgttttgagggaatgtaatgtttt 5658821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 15804453 - 15804406
Alignment:
Q  3 atagtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||||| | ||| |||||||| |||||||||||||||    
T  15804453 atagtgtgtttggatggggaaatgttttgagggaatgtaatgttttga 15804406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 33245440 - 33245385
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaa 60  Q
    ||||||||||||||| ||||| |||||| | ||||||||||||||| | |||||||    
T  33245440 agtgtgtttggatgggggaatgttttgatggaatgtaatgttttgagaaaattcaa 33245385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 8255033 - 8255091
Alignment:
Q  9 tgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattatttt 67  Q
    |||||| ||||||||||| ||| |||||||||||||||||||   ||||||| ||||||    
T  8255033 tgtttgaatggaggaatactttaaggtaatgtaatgttttgagggaattcaaatatttt 8255091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 33146257 - 33146211
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    |||||||| ||||||||||||||| | |||||||| |||||||||||    
T  33146257 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 33146211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 3563279 - 3563324
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||| | ||||| |||||||| |||||||||||||||    
T  3563279 agtgtgtttggataggggaatgttttgagggaatgtaatgttttga 3563324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 22766954 - 22766999
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||    
T  22766954 agtgtgtttggatgggggaatgttttgagggaatataatgttttga 22766999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 26281337 - 26281292
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||| ||||  |||||||| |||||||||||||||    
T  26281337 agtgtgtttggatgggggaacgttttgagggaatgtaatgttttga 26281292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 28490076 - 28490031
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacat 123  Q
    |||||||| ||||||||||||||| | |||||||| ||||||||||    
T  28490076 caaacaatggaattcacctcaaagtatttgaattccctcaaaacat 28490031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 28828431 - 28828504
Alignment:
Q  87 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 160  Q
    |||| |||||||||  | |||||||| ||||||||||||||||  ||||||||||| |  |||||||| |||||    
T  28828431 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaacacact 28828504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 35379346 - 35379390
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  35379346 agtgtgtttggatgg-ggaatgttttgagataatgtaatgttttga 35379390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 2550384 - 2550348
Alignment:
Q  88 aattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    |||||||||||||| |||||||||| |||||||||||    
T  2550384 aattcacctcaaagtagttgaattccctcaaaacatt 2550348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 11601042 - 11601109
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtg 73  Q
    |||||||||| ||| | ||||||||| ||||||| ||||||||||||  ||||||| || |||||||||    
T  11601042 agtgtgtttgaatg-atgaatattttaaggtaatataatgttttgaaggaattcaaataatttgaggtg 11601109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 566 - 402
Alignment:
Q  1 ttatagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaa 100  Q
    ||||||||||||||||||| ||||| |||||||| |||||||||||||||   ||||||| || |||||||||  ||||||||||||||||||||   ||    
T  566 ttatagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccctgaa 467  T
Q  101 gaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    | |||||||||| ||||||||||||  ||| |||||||||||||  |||||||| ||||||||||    
T  466 gtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 402  T

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Target: scaffold1562; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 160
Target Start/End: Original strand, 407 - 562
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| |||||||||||||| ||  |||||||||||   ||||||| || ||   |||| |||| |    | ||| ||||||||||| ||    
T  407 agtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattcaactacttcagggtgaattctattgtttgaactcacctcaaagtag 506  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 160  Q
    |||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||    
T  507 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 2027 - 2191
Alignment:
Q  1 ttatagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaa 100  Q
    ||||||||||||||||||| ||||| |||||||| |||||||||||||||   ||||||| || |||||||||  ||||||||||||||||||||   ||    
T  2027 ttatagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccctgaa 2126  T
Q  101 gaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 165  Q
    | |||||||||| ||||||||||||  ||| |||||||||||||  |||||||| ||||||||||    
T  2127 gtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 2191  T

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Target: scaffold1158; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 160
Target Start/End: Complemental strand, 2186 - 2031
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 104  Q
    ||||||||||||||| |||||||||||||| ||  |||||||||||   ||||||| || ||   |||| |||| |    | ||| ||||||||||| ||    
T  2186 agtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattcaactacttcagggtgaattctattgtttgaactcacctcaaagtag 2087  T
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 160  Q
    |||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||    
T  2086 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 2031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 67; Significance: 9e-30; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 56307 - 56425
Alignment:
Q  36 aatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctca 135  Q
    |||||||||||||||   ||||||| || |||||||||  ||||||||||||||||||||| |||| |||||||||| ||||||||||||| ||| ||||    
T  56307 aatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctca 56406  T
Q  136 aaatattccgtcatccaaa 154  Q
    ||||||||| |||||||||    
T  56407 aaatattccctcatccaaa 56425  T

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Target: scaffold0044; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 56429 - 56306
Alignment:
Q  7 tgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagtt 106  Q
    ||||||||||||  |||||||||||||| || ||||||||||||   ||||||| || ||| ||||| |||| |    | ||| ||||||||||| ||||    
T  56429 tgtgtttggatgagggaatattttgagggaaagtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagtagtt 56330  T
Q  107 gaattcgctcaaaacattacattc 130  Q
    |||||| |||||||||||||||||    
T  56329 gaattccctcaaaacattacattc 56306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 4159 - 4071
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 166  Q
    |||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||| ||||| | ||||||| |||||||||||    
T  4159 caaacaatagaattcacctcaaagtatttgaattccctcaaaacattacattctctcaaaacattcctttatccaaacacactcttagg 4071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 4077 - 4150
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    |||||||||||||  |||||| |||||||  |||||||||||||||   ||||||| || ||||||||| ||||    
T  4077 agtgtgtttggataaaggaatgttttgagagaatgtaatgttttgagggaattcaaatactttgaggtgaattc 4150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 42076 - 41997
Alignment:
Q  83 aatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||| |||||  ||| |||| |||||||    
T  42076 aatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactct 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 41999 - 42072
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||   ||||||| || ||||||||| ||||    
T  41999 agtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 42072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 164
Target Start/End: Original strand, 42080 - 42139
Alignment:
Q  105 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 164  Q
    |||||||| ||||||||||||||||| |||||||  ||||  |||||||| |||||||||    
T  42080 ttgaattctctcaaaacattacattccctcaaaacgttcccccatccaaacacactctta 42139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 42135 - 42080
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaa 60  Q
    ||||||||||||||| ||||  |||||||| ||||||||||||||| | |||||||    
T  42135 agtgtgtttggatgggggaacgttttgagggaatgtaatgttttgagagaattcaa 42080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 83025 - 82945
Alignment:
Q  80 aacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 160  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||||||| ||||   |||||||| |||||    
T  83025 aacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcacccatccaaacacact 82945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 82945 - 82990
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 50  Q
    |||||||||||||||  |||| |||||||| |||||||||||||||    
T  82945 agtgtgtttggatgggtgaatgttttgagggaatgtaatgttttga 82990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 19280 - 19193
Alignment:
Q  79 aaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttaggg 167  Q
    ||||||| ||||||||||||||  | |||||||| ||||||||||||||||| ||||||||| |||  |||||||| ||||| ||||||    
T  19280 aaacaatggaattcacctcaaaatatttgaattc-ctcaaaacattacattccctcaaaatactcccccatccaaacacacttttaggg 19193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 19200 - 19272
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||| |  ||||||| |||||||||||| ||||    
T  19200 agtgtgtttggatgggggagtattttgagggaatgtaatgttttg-aggaattcaaatattttgaggtgaattc 19272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 19856 - 19788
Alignment:
Q  4 tagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtg 73  Q
    |||||||||||||||| ||| | |||||||| ||||||||||||| | | ||||||| || |||||||||    
T  19856 tagtgtgtttggatggggga-tgttttgagggaatgtaatgttttaagaaaattcaaatactttgaggtg 19788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 2950 - 2867
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 162  Q
    |||||||| |||||||||||||| |  |||||||| ||||||||||||||||||||| ||| |||||  |||| ||| |||||||    
T  2950 caaacaatggaattcacctcaaatat-ttgaattccctcaaaacattacattctctcgaaacattcccccatctaaacacactct 2867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 4487 - 4570
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactc 161  Q
    |||||||| ||||||||| ||||  | |||||||  |||||||||||| |||| ||||||| ||||| ||||||||| ||||||    
T  4487 caaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 4570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 4569 - 4496
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    ||||||||||||||  ||||| |||||||| ||| |||||||||||   ||||||| ||||||| |||| ||||    
T  4569 agtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttggggtgaattc 4496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 5131 - 5214
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactc 161  Q
    |||||||| ||||||||| ||||  | |||||||  |||||||||||| |||| ||||||| ||||| ||||||||| ||||||    
T  5131 caaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 5214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 5213 - 5140
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaataattcaattattttgaggtggattc 78  Q
    ||||||||||||||  ||||| |||||||| ||| |||||||||||   ||||||| ||||||| |||| ||||    
T  5213 agtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttggggtgaattc 5140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 17561 - 17620
Alignment:
Q  65 tttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 124  Q
    |||||||||||  ||||||||| ||| |||||||||| |||||||||| |||||||||||    
T  17561 tttgaggtggaaccaaacaataaaatgcacctcaaaggagttgaattccctcaaaacatt 17620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 10970 - 10905
Alignment:
Q  78 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattc 143  Q
    |||||||| |||||||| |||||| | |||||||| ||||||||||||||||| || |||| ||||    
T  10970 caaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattcccttaaaacattc 10905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 7153 - 7196
Alignment:
Q  5 agtgtgtttggatggaggaatattttgaggtaatgtaatgtttt 48  Q
    ||||||||||||||||||||| |||||||| |||||| ||||||    
T  7153 agtgtgtttggatggaggaatgttttgagggaatgtattgtttt 7196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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