View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18043_low_12 (Length: 202)
Name: NF18043_low_12
Description: NF18043
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18043_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 154; Significance: 7e-82; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 26199728 - 26199571
Alignment:
| Q |
29 |
catcatcatttgtcaagagagaacaatttccttcctgaggagatcgaacatcccaaattgatatgtcatcacctattagggtctcttaggtccatatcca |
128 |
Q |
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| T |
26199728 |
catcatcatttgtcaagagagaacaatttccttcctgaggagatcgaacatcccaaattgatatgtcatcacctattagggtctcttaggtccatatcca |
26199629 |
T |
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| Q |
129 |
gaaagcacagtggaaatggacacaaaccaccgtcaaagagccaaagatcacatttcat |
186 |
Q |
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| T |
26199628 |
gaaagcacagtggaaatggacacaaaccaccgtcaaggagccaaagatcacatttcat |
26199571 |
T |
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