View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18044_low_2 (Length: 618)
Name: NF18044_low_2
Description: NF18044
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18044_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 520; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 520; E-Value: 0
Query Start/End: Original strand, 25 - 601
Target Start/End: Original strand, 41441314 - 41441890
Alignment:
| Q |
25 |
gagaaggtttaaagactaaagaccaaccgtatgtgtcaatttcaacaaatcagatttcttgttgtcaatattttaacgcattcacatacaaccattattg |
124 |
Q |
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| T |
41441314 |
gagaaggtctaaagactaaagaccaaccgtatgtgtcaattttagcaaatcggatttcttgttgtcaatgttttgacgcattcacatacaaccattattg |
41441413 |
T |
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| Q |
125 |
gatctaaattaaacgatctatattttaatgcaaatttgatttctttaatactaaaaatacagaacctgaaatcaaaattgttcgatcactatccaacgac |
224 |
Q |
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| T |
41441414 |
gatctaaattaaacgatctatgttttaatgcaaatttgatttctttaatactaaaaataaagaacctgaaatcaaaattgttcgatcactatccaacgac |
41441513 |
T |
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| Q |
225 |
cacatatataccaaatgcatgattgcctcaaacattgagtgcagataatcatatgttattatgatgattgtgcacgtaatccannnnnnnagttccctac |
324 |
Q |
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| T |
41441514 |
cacatatataccaaatgcatgattgcctcaaacattgagtgcagataatcatatgttattatgatgattgtgcacgtaatccatttttttagttccctac |
41441613 |
T |
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| Q |
325 |
aacatgcgtatgcctctttttgtggaatgcaatgttactgtctcaactccatggcctacgtgtgaggaaggaatggtgtgtgtgattttcttagttatat |
424 |
Q |
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| T |
41441614 |
aacatgcgtatgcctctttttgtggaatgcaatgttactgtctcaactccatggcctacgtgtgaggaaggaatggtgtgtgtgattttcttagttatat |
41441713 |
T |
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| Q |
425 |
tgaaagcgatgctgctgtattgaagcagaacatagcacgggttacctgtttatttatatcaatctaaactttgaactagttcttttttctctcgtgttat |
524 |
Q |
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| T |
41441714 |
tgaaagcgatgctgctgtattgaagcagaacatagcacgggttacctgtttatttatatcaatctaaactttgaactagttcttttttctctcgtgttat |
41441813 |
T |
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| Q |
525 |
catcatgctacaacacttttttatttaaggtgactaaactaaaggatcatgcttgctacctagatgctaattagtat |
601 |
Q |
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| T |
41441814 |
catcatgctacaacacttttttatttaaggtgattaaactaaaggatcatgcttgctacctagatgctaattagtat |
41441890 |
T |
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