View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18046_high_8 (Length: 281)
Name: NF18046_high_8
Description: NF18046
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18046_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 7 - 274
Target Start/End: Complemental strand, 25273488 - 25273221
Alignment:
| Q |
7 |
gtatcaaaggtggtgggatggtggaagtgtttgtcagcggttagtttaaagttaaaacgacgacggtgtggagagcgaggtcgccagagtggatagcaag |
106 |
Q |
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| T |
25273488 |
gtatcaaaggtgatgggatggtggaagtgtttgtcagcggtaagtttaaagttaaaacgacgatggcgtggagagcgaggtcgccagagtggatagcaag |
25273389 |
T |
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| Q |
107 |
agagaatgatttgctaatggtggaagttgcgatgttggatcagtgtgtggttgcagtgatgctgtagctagctcctacttcttctcctatcttannnnnn |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25273388 |
agagaatgatttgctaatggtggaagttgcgatgttggatcagtgtgtggttgcagtgatgctgtagctagctcctacttcttctcctatcttatttttt |
25273289 |
T |
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| Q |
207 |
natgatttcctttctctctcaaacaaatatttcatatggcctttgtttttgttttgatgatgatgatg |
274 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
25273288 |
tatgatttcctttctctctcaaacaaatatttcatatggcatttgtttttgttttgatgatgatgatg |
25273221 |
T |
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