View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18047_high_23 (Length: 260)

Name: NF18047_high_23
Description: NF18047
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18047_high_23
NF18047_high_23
[»] chr6 (28 HSPs)
chr6 (16-188)||(30578483-30578661)
chr6 (185-259)||(24798542-24798616)
chr6 (184-259)||(9022837-9022912)
chr6 (187-259)||(2397770-2397842)
chr6 (187-259)||(17496314-17496386)
chr6 (187-259)||(2667321-2667393)
chr6 (187-259)||(32541473-32541545)
chr6 (187-259)||(2656666-2656738)
chr6 (187-259)||(24825165-24825237)
chr6 (187-259)||(29795451-29795523)
chr6 (185-259)||(995561-995635)
chr6 (187-259)||(30699261-30699333)
chr6 (187-259)||(28483037-28483110)
chr6 (187-259)||(6142503-6142575)
chr6 (185-252)||(24949533-24949600)
chr6 (185-259)||(4890122-4890196)
chr6 (189-259)||(29515022-29515092)
chr6 (81-168)||(29954339-29954432)
chr6 (187-259)||(2141568-2141640)
chr6 (187-259)||(6188652-6188724)
chr6 (187-259)||(31708893-31708965)
chr6 (203-259)||(13358525-13358581)
chr6 (187-259)||(16661598-16661670)
chr6 (186-259)||(35117279-35117352)
chr6 (187-253)||(10109413-10109478)
chr6 (217-259)||(16969408-16969450)
chr6 (187-259)||(31948637-31948709)
chr6 (194-259)||(32673755-32673820)
[»] chr3 (48 HSPs)
chr3 (185-259)||(9484594-9484668)
chr3 (185-259)||(29793365-29793439)
chr3 (186-259)||(42098614-42098687)
chr3 (187-259)||(29455695-29455767)
chr3 (187-259)||(49076413-49076485)
chr3 (187-259)||(12948040-12948112)
chr3 (187-259)||(16434844-16434916)
chr3 (187-259)||(34263691-34263763)
chr3 (184-259)||(34555148-34555223)
chr3 (186-259)||(901075-901148)
chr3 (187-259)||(48927789-48927861)
chr3 (187-259)||(50673677-50673749)
chr3 (187-252)||(29720395-29720460)
chr3 (192-259)||(34669613-34669680)
chr3 (186-259)||(53274982-53275055)
chr3 (187-259)||(38833952-38834024)
chr3 (187-251)||(46866343-46866407)
chr3 (185-259)||(2643256-2643330)
chr3 (187-259)||(4229175-4229247)
chr3 (189-248)||(14751040-14751099)
chr3 (192-259)||(38878465-38878532)
chr3 (188-259)||(53055612-53055683)
chr3 (185-259)||(1778359-1778433)
chr3 (185-259)||(29809343-29809417)
chr3 (187-259)||(36179123-36179195)
chr3 (186-250)||(44781979-44782043)
chr3 (187-259)||(36364750-36364820)
chr3 (187-259)||(4945838-4945910)
chr3 (187-259)||(18013457-18013529)
chr3 (187-259)||(28958986-28959058)
chr3 (187-259)||(32961246-32961318)
chr3 (204-259)||(26759496-26759551)
chr3 (209-252)||(43370313-43370356)
chr3 (184-259)||(52094081-52094156)
chr3 (187-253)||(28229038-28229104)
chr3 (190-259)||(1334282-1334351)
chr3 (194-259)||(43394545-43394610)
chr3 (218-259)||(49818788-49818829)
chr3 (187-259)||(4464881-4464953)
chr3 (229-259)||(29588415-29588445)
chr3 (217-259)||(36594406-36594448)
chr3 (187-253)||(47069406-47069472)
chr3 (194-256)||(50035077-50035139)
chr3 (202-259)||(3804455-3804512)
chr3 (194-259)||(21489925-21489990)
chr3 (202-259)||(47340071-47340128)
chr3 (202-252)||(1325541-1325588)
chr3 (186-250)||(33462704-33462768)
[»] chr1 (36 HSPs)
chr1 (185-259)||(45299316-45299390)
chr1 (187-259)||(8251145-8251217)
chr1 (187-259)||(10100509-10100581)
chr1 (186-259)||(10124108-10124181)
chr1 (187-259)||(52749281-52749353)
chr1 (185-259)||(1821624-1821698)
chr1 (187-259)||(6017445-6017517)
chr1 (185-259)||(8048744-8048818)
chr1 (193-259)||(26543874-26543940)
chr1 (187-259)||(5606387-5606459)
chr1 (187-259)||(7075326-7075398)
chr1 (187-259)||(41414203-41414275)
chr1 (187-259)||(41855717-41855789)
chr1 (187-259)||(44240519-44240591)
chr1 (201-259)||(48389080-48389138)
chr1 (187-259)||(5945765-5945837)
chr1 (187-259)||(28490160-28490232)
chr1 (187-259)||(29253479-29253551)
chr1 (187-259)||(31932174-31932246)
chr1 (189-259)||(44452197-44452267)
chr1 (187-259)||(36035686-36035758)
chr1 (179-259)||(47912273-47912353)
chr1 (196-259)||(31651897-31651960)
chr1 (194-259)||(23393239-23393304)
chr1 (202-259)||(44741358-44741415)
chr1 (187-259)||(2126652-2126724)
chr1 (187-259)||(12685894-12685966)
chr1 (187-259)||(50014557-50014629)
chr1 (204-259)||(10648197-10648252)
chr1 (187-259)||(41855797-41855869)
chr1 (187-259)||(43453161-43453233)
chr1 (217-253)||(52688559-52688595)
chr1 (217-259)||(33730190-33730232)
chr1 (221-259)||(40883445-40883483)
chr1 (187-252)||(48312029-48312093)
chr1 (207-259)||(23337827-23337879)
[»] scaffold0221 (1 HSPs)
scaffold0221 (187-259)||(5376-5448)
[»] chr5 (36 HSPs)
chr5 (187-259)||(1098175-1098247)
chr5 (187-259)||(14633007-14633079)
chr5 (186-259)||(20040407-20040480)
chr5 (187-259)||(1781137-1781209)
chr5 (187-259)||(19344691-19344763)
chr5 (187-259)||(31191169-31191241)
chr5 (187-259)||(40316818-40316890)
chr5 (187-259)||(41410651-41410723)
chr5 (186-259)||(13548212-13548285)
chr5 (202-259)||(20022875-20022932)
chr5 (187-259)||(1831351-1831423)
chr5 (193-259)||(30211733-30211799)
chr5 (190-259)||(14057711-14057780)
chr5 (190-259)||(14607549-14607618)
chr5 (186-259)||(30721677-30721750)
chr5 (178-259)||(40079972-40080053)
chr5 (187-259)||(41263121-41263193)
chr5 (194-259)||(8627142-8627207)
chr5 (187-259)||(27675540-27675612)
chr5 (187-259)||(30788205-30788277)
chr5 (187-259)||(33402583-33402655)
chr5 (185-259)||(9936880-9936954)
chr5 (186-259)||(10465287-10465360)
chr5 (202-259)||(34347482-34347539)
chr5 (184-259)||(2551619-2551694)
chr5 (204-253)||(2799648-2799697)
chr5 (202-259)||(41042829-41042886)
chr5 (187-259)||(39925203-39925275)
chr5 (204-253)||(2805814-2805863)
chr5 (190-259)||(34169832-34169901)
chr5 (187-259)||(32110664-32110736)
chr5 (217-259)||(967222-967264)
chr5 (221-259)||(20503040-20503078)
chr5 (217-259)||(28142958-28143000)
chr5 (187-259)||(14139935-14140007)
chr5 (187-259)||(32474014-32474086)
[»] chr7 (28 HSPs)
chr7 (185-259)||(38069049-38069123)
chr7 (187-259)||(16807138-16807210)
chr7 (187-257)||(25274011-25274081)
chr7 (185-259)||(36819614-36819688)
chr7 (187-259)||(30462213-30462285)
chr7 (187-259)||(35693822-35693894)
chr7 (187-259)||(37101018-37101090)
chr7 (187-259)||(40231928-40232000)
chr7 (187-259)||(46242472-46242544)
chr7 (184-259)||(32972319-32972394)
chr7 (186-259)||(28016115-28016187)
chr7 (203-259)||(38850718-38850774)
chr7 (204-259)||(47713424-47713479)
chr7 (217-259)||(4620097-4620139)
chr7 (187-245)||(35265823-35265881)
chr7 (194-259)||(40818689-40818754)
chr7 (187-259)||(7314337-7314409)
chr7 (187-259)||(9173328-9173400)
chr7 (217-259)||(31496637-31496679)
chr7 (217-259)||(38441843-38441885)
chr7 (187-241)||(39982117-39982171)
chr7 (184-253)||(3124144-3124213)
chr7 (187-259)||(18756599-18756671)
chr7 (187-259)||(42493517-42493589)
chr7 (185-259)||(9136654-9136728)
chr7 (185-259)||(40665760-40665834)
chr7 (221-259)||(41007948-41007986)
chr7 (187-259)||(33376775-33376847)
[»] chr4 (35 HSPs)
chr4 (185-259)||(31152659-31152733)
chr4 (187-259)||(10384848-10384920)
chr4 (187-259)||(37667765-37667837)
chr4 (187-259)||(40411600-40411672)
chr4 (187-259)||(55631866-55631938)
chr4 (185-259)||(46608211-46608285)
chr4 (186-259)||(48380472-48380545)
chr4 (187-259)||(43447165-43447237)
chr4 (192-259)||(39170963-39171030)
chr4 (187-259)||(3708253-3708325)
chr4 (187-259)||(39332821-39332893)
chr4 (185-259)||(31657347-31657421)
chr4 (186-259)||(8525407-8525480)
chr4 (187-259)||(43047387-43047459)
chr4 (184-259)||(6520432-6520507)
chr4 (187-259)||(1377503-1377575)
chr4 (187-259)||(28914368-28914440)
chr4 (187-258)||(28899063-28899134)
chr4 (184-259)||(42185271-42185346)
chr4 (189-252)||(48336426-48336489)
chr4 (193-259)||(1613209-1613275)
chr4 (185-259)||(33394075-33394149)
chr4 (187-258)||(24334373-24334444)
chr4 (217-259)||(29821080-29821122)
chr4 (185-259)||(39376863-39376937)
chr4 (187-259)||(23605893-23605965)
chr4 (187-259)||(28988385-28988457)
chr4 (184-250)||(4860078-4860143)
chr4 (217-259)||(47834135-47834177)
chr4 (185-259)||(53987771-53987845)
chr4 (187-259)||(18881348-18881420)
chr4 (187-259)||(37164017-37164088)
chr4 (187-259)||(44210149-44210221)
chr4 (217-259)||(1981373-1981415)
chr4 (187-259)||(25644548-25644620)
[»] chr2 (31 HSPs)
chr2 (189-259)||(7724602-7724672)
chr2 (186-259)||(12208988-12209061)
chr2 (187-259)||(8373434-8373506)
chr2 (189-259)||(31603407-31603477)
chr2 (186-259)||(16126073-16126146)
chr2 (186-259)||(16333479-16333552)
chr2 (188-259)||(16127771-16127842)
chr2 (185-259)||(38963793-38963867)
chr2 (187-259)||(40471736-40471808)
chr2 (187-259)||(41575562-41575634)
chr2 (185-259)||(10333569-10333643)
chr2 (186-259)||(5096247-5096320)
chr2 (187-259)||(8896271-8896343)
chr2 (187-259)||(41436832-41436904)
chr2 (202-259)||(11277566-11277623)
chr2 (187-259)||(4137410-4137481)
chr2 (187-259)||(6730094-6730166)
chr2 (187-259)||(22718534-22718606)
chr2 (187-259)||(45036363-45036435)
chr2 (187-258)||(37316876-37316947)
chr2 (204-259)||(37987927-37987982)
chr2 (184-259)||(44022265-44022340)
chr2 (185-259)||(18504470-18504544)
chr2 (186-259)||(20682653-20682726)
chr2 (186-259)||(25766443-25766516)
chr2 (187-259)||(2831707-2831779)
chr2 (185-259)||(16646244-16646318)
chr2 (186-259)||(25762193-25762266)
chr2 (187-259)||(6075125-6075197)
chr2 (204-259)||(15177386-15177441)
chr2 (217-259)||(43328792-43328834)
[»] chr8 (38 HSPs)
chr8 (186-259)||(30464431-30464504)
chr8 (187-259)||(23437802-23437874)
chr8 (186-259)||(761549-761622)
chr8 (186-259)||(25691586-25691659)
chr8 (186-259)||(43184768-43184841)
chr8 (184-259)||(25009141-25009216)
chr8 (185-259)||(14378675-14378749)
chr8 (187-259)||(4327108-4327180)
chr8 (187-259)||(28583292-28583364)
chr8 (187-259)||(37094132-37094204)
chr8 (187-259)||(44887704-44887776)
chr8 (185-259)||(8496875-8496949)
chr8 (186-252)||(3466282-3466348)
chr8 (186-259)||(38842161-38842235)
chr8 (186-259)||(11756775-11756848)
chr8 (187-259)||(5777543-5777615)
chr8 (187-259)||(20671256-20671328)
chr8 (187-259)||(4960151-4960223)
chr8 (187-259)||(15870175-15870247)
chr8 (187-259)||(40645609-40645681)
chr8 (185-252)||(23547066-23547133)
chr8 (217-259)||(21132917-21132959)
chr8 (186-259)||(17523804-17523877)
chr8 (187-259)||(44717296-44717368)
chr8 (187-258)||(44361921-44361992)
chr8 (185-246)||(8123653-8123714)
chr8 (194-259)||(29917917-29917981)
chr8 (194-259)||(43049258-43049323)
chr8 (187-252)||(44947018-44947082)
chr8 (187-259)||(12893717-12893789)
chr8 (187-259)||(29616315-29616387)
chr8 (187-259)||(30653360-30653432)
chr8 (195-259)||(44039833-44039897)
chr8 (217-259)||(18419028-18419070)
chr8 (185-259)||(27301860-27301934)
chr8 (217-253)||(2026602-2026638)
chr8 (187-259)||(13888619-13888691)
chr8 (227-259)||(25866103-25866135)
[»] scaffold0001 (1 HSPs)
scaffold0001 (187-259)||(183966-184038)
[»] scaffold0281 (1 HSPs)
scaffold0281 (187-259)||(13104-13176)
[»] scaffold0500 (1 HSPs)
scaffold0500 (187-259)||(667-739)
[»] scaffold0204 (1 HSPs)
scaffold0204 (189-252)||(23948-24011)
[»] scaffold0069 (1 HSPs)
scaffold0069 (187-259)||(4441-4513)
[»] scaffold0283 (1 HSPs)
scaffold0283 (187-252)||(2996-3060)
[»] scaffold0289 (1 HSPs)
scaffold0289 (187-250)||(9135-9198)
[»] scaffold1248 (1 HSPs)
scaffold1248 (221-259)||(1448-1486)
[»] scaffold0952 (1 HSPs)
scaffold0952 (221-259)||(827-865)


Alignment Details
Target: chr6 (Bit Score: 148; Significance: 3e-78; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 30578483 - 30578661
Alignment:
Q  16 gaaaccccttagctataacatcgtcatgaaaatgcaatgctttcttaacttcgttattaatacaaagacctttcaaaagtgtagtcaaagttacagta-- 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||      
T  30578483 gaaaccccttagctataacatcgtcatgaaaatgcaatgctttcttaacttcgttattaatacaaagacctttcaaaagtgtagtcaaagttacggtatc 30578582  T
Q  114 ----tgataacctatcttgagaatcttggccaatacggaaaatgcataattgagttgacagaggtggcaaaaagaatta 188  Q
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  30578583 aggctgataacctatcttgagaatcttggccaatacggaaaatgcataattgagttgacagaggtggtaaaaagaatta 30578661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 24798616 - 24798542
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24798616 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 24798542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 9022837 - 9022912
Alignment:
Q  184 aattactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  9022837 aattactccctccgtcctgcaataaatgacctgtttgaaaatatgcaattttgacctaacatactttgaccatatt 9022912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 2397770 - 2397842
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2397770 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttactttgaccatatt 2397842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 17496386 - 17496314
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17496386 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 17496314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 2667393 - 2667321
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  2667393 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgactatatt 2667321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 32541545 - 32541473
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  32541545 tactccctccgtcccgcaataaatgacctgtttgaaaatatgcaattttgacctaatttactttgaccatatt 32541473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 2656738 - 2656666
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  2656738 tactccatccgtcccgcaataaatgagctgtttgaaaatgtgcaattttgacctaacttactttgactatatt 2656666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 24825165 - 24825237
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||  ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24825165 tactccctccgtcctttaataagtgacatgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 24825237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 29795451 - 29795523
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||    
T  29795451 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgatctaacttactttaaccatatt 29795523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 995561 - 995635
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||| || |||||||||| |||||    
T  995561 attactccctccgtcctgcaataaatgacatgtttgaaaatgtgtaattttgaccaaatttactttgactatatt 995635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 30699261 - 30699333
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||| | ||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||    
T  30699261 tactccctccgttccgcaataaatgatctgtttaaaaatgtgtaattttgacctaacttactttgaccatatt 30699333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 28483037 - 28483110
Alignment:
Q  187 tactccctcc-gtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||    
T  28483037 tactccctcccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgatctaacttactttaaccatatt 28483110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 6142575 - 6142503
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| |||||||   ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6142575 tactccatccgtcccttaataagtgacctgtttgaaaatgtgcaattttgacctaacttactttgatcatatt 6142503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 24949533 - 24949600
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttga 252  Q
    |||||||||||||||| |||||| ||||||  ||||||||||||||||||||| ||||||||||||||    
T  24949533 attactccctccgtcccgcaatagatgacccatttgaaaatgtgcaattttgatctaacttactttga 24949600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 4890196 - 4890122
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||| ||||||| |||| |  ||| |||||||||||||||||||||| ||||||||||||||||    
T  4890196 attactccctccgtcatgcaatagatgatccatttaaaaatgtgcaattttgacctaatttactttgaccatatt 4890122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 29515092 - 29515022
Alignment:
Q  189 ctccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||   ||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29515092 ctccctccgtcccttaataagtaacctgtttgaaaatgtgcaattttgacctaacttactttgatcatatt 29515022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 168
Target Start/End: Original strand, 29954339 - 29954432
Alignment:
Q  81 agacctttcaaaagtgtagtcaaagttacagtat------gataacctatcttgagaatcttggccaatacggaaaatgcataattgagttgac 168  Q
    |||||||| | |||||||||||||||||| ||||      ||||||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  29954339 agacctttgataagtgtagtcaaagttacggtatcaggctgataacccattttgagaatcttggccaatacagaaaatgcataattgagttgac 29954432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 2141568 - 2141640
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| |||||||   ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  2141568 tactccgtccgtcccttaataagtgacctgtttgaaaatgtacaattttgacctaacttactttgatcatatt 2141640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 6188724 - 6188652
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| |||||||   ||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  6188724 tactccatccgtcccttaataagtgacatgtttgaaaatgtgcaattttgacctaacttactttgagcatatt 6188652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 31708893 - 31708965
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||||||||| |||| || ||| |||||||||||||||||| ||| ||||||||||| ||||    
T  31708893 tactccctccgtcctgcaatagatgatctatttaaaaatgtgcaattttgacttaatttactttgaccgtatt 31708965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 13358525 - 13358581
Alignment:
Q  203 caataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||| ||||| | |||||||||||| ||||||||||||||||||||||||||||||    
T  13358525 caatagatgacttatttgaaaatgtgtaattttgacctaacttactttgaccatatt 13358581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 16661670 - 16661598
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||| |||| |||||| |||| |  |||||||||||| ||||||||||||||||||||||||| ||||    
T  16661670 tactccctcagtcccgcaatagatgatccatttgaaaatgtgtaattttgacctaacttactttgaccgtatt 16661598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 35117279 - 35117352
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||| || | ||||||||  |||  ||||||||||||||||||| || ||||||||||||||||||||    
T  35117279 ttactccctctgttccgcaataaagaacccatttgaaaatgtgcaattttaacataacttactttgaccatatt 35117352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 10109478 - 10109413
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgac 253  Q
    |||| ||||||||| |||||| |||| |  ||| |||||||||||||||||||||||||||||||||    
T  10109478 tacttcctccgtcc-gcaatagatgatccatttaaaaatgtgcaattttgacctaacttactttgac 10109413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 16969408 - 16969450
Alignment:
Q  217 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||||||||| ||| ||||||||||||||||    
T  16969408 tttgaaaatgtgcaattttgacttaatttactttgaccatatt 16969450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 31948709 - 31948637
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||  |||||| |||| |  |||||||||||| |||| |||| ||||||| ||||||||||||    
T  31948709 tactccctccgtctcgcaatagatgatccatttgaaaatgtgtaattatgacttaacttattttgaccatatt 31948637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 32673755 - 32673820
Alignment:
Q  194 tccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||| | |||| |||| || ||| ||||| ||||||||||| |||||||| ||||||||||||    
T  32673755 tccgtcccgtaatagatgatctatttaaaaatttgcaattttgatctaacttattttgaccatatt 32673820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 9484594 - 9484668
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9484594 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 9484668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 29793439 - 29793365
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29793439 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 29793365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 42098687 - 42098614
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42098687 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 42098614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 29455767 - 29455695
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29455767 tactccctccgtcctgtaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 29455695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 49076485 - 49076413
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49076485 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 49076413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 12948040 - 12948112
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12948040 tactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 12948112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 16434916 - 16434844
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16434916 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttattttgaccatatt 16434844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 34263763 - 34263691
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  34263763 tactccctccgtcccgcaataaatgacctgtttaaaaatgtgcaattttgacctaacttactttgaccatatt 34263691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 34555148 - 34555223
Alignment:
Q  184 aattactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34555148 aattactccctccgtcccgcaataagtgacctgtttgaaaatgtgcatttttgacctaacttactttgaccatatt 34555223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 901148 - 901075
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  901148 ttactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgatcatatt 901075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 48927861 - 48927789
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  48927861 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaatttttacctaacttactttgaccatatt 48927789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 50673677 - 50673749
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  50673677 tactccctccgttccgcaataaatgacctgtttgaaaatgtgcaattttgacttaacttactttgaccatatt 50673749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 29720395 - 29720460
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttga 252  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29720395 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttga 29720460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 34669613 - 34669680
Alignment:
Q  192 cctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  34669613 cctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgatcatatt 34669680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 53275055 - 53274982
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||    
T  53275055 ttactccttccgtcccgcaataaatgacctatttgaaaatgtgcaattttgacctaacttattttgatcatatt 53274982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 38834024 - 38833952
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||| |||| |||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  38834024 tacttcctctgtcccgcaataaatgacctgtttaaaaatgtgtaattttgacctaacttactttgaccatatt 38833952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 46866343 - 46866407
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttg 251  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  46866343 tactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttattttg 46866407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 2643330 - 2643256
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||| |||||| ||||||| ||||||||| |||||||||||||||  ||||||||||||||||    
T  2643330 attactccctccgtcccgcaatagatgacctatttgaaaatttgcaattttgacctagtttactttgaccatatt 2643256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 4229247 - 4229175
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||| |||||||||||||||| | ||||||||| ||||||||||||||| |||||||||| ||||||    
T  4229247 tactccctccatcctgcaataaatgacttatttgaaaatttgcaattttgacctagcttactttgatcatatt 4229175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 14751099 - 14751040
Alignment:
Q  189 ctccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttact 248  Q
    |||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  14751099 ctccctccctcccgcaatagatgacctgtttgaaaatgtgcaattttgacctaacttact 14751040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 259
Target Start/End: Complemental strand, 38878532 - 38878465
Alignment:
Q  192 cctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||    
T  38878532 cctccgtcccgtaataaatgacctgtttgaaaatgtgcaattttgacataaattattttgaccatatt 38878465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 53055683 - 53055612
Alignment:
Q  188 actccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||||||||||||  |||||||||||| ||||||||||||||| | ||||||||||||    
T  53055683 actccctccgtcctacaataaatgaccaatttgaaaatgtgtaattttgacctaactaattttgaccatatt 53055612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 1778359 - 1778433
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| ||||||||| |||||| ||||||| ||||||||| |||||||||||| || |||||||||||||||||    
T  1778359 attacttcctccgtcccgcaatagatgacctatttgaaaatttgcaattttgacttagcttactttgaccatatt 1778433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 29809343 - 29809417
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||| |||||| ||||||| ||||||||| ||||||||||| ||| ||||||| |||||||||    
T  29809343 attactccctccgtcccgcaatagatgacctatttgaaaatttgcaattttgatctagcttacttcgaccatatt 29809417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 36179195 - 36179123
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||| ||||||||  |||||||| ||||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  36179195 tactctctccgtcccacaataaataacctgtttgaaaatgtgcaattttgacttaatttactttgatcatatt 36179123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 44782043 - 44781979
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 250  Q
    ||||||||||||||| |||||| ||||||| ||||||||| ||||||||||| ||||||||||||    
T  44782043 ttactccctccgtcccgcaatagatgacctatttgaaaatttgcaattttgaactaacttacttt 44781979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 36364820 - 36364750
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||| ||||| ||||||||| |||| ||||||||||  |||||||||||||||||| ||||||||||||    
T  36364820 tactcccttcgtcccgcaataaataacctatttgaaaatg--caattttgacctaacttattttgaccatatt 36364750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 4945910 - 4945838
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||  | ||| ||||| | ||||| ||| |||||||||||||||||||||||||||||||||    
T  4945910 tactccctccgtcccaccatagatgacgtatttgagaatttgcaattttgacctaacttactttgaccatatt 4945838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 18013529 - 18013457
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| | |||| ||||||  |||||||||||||||||||||| ||| ||||||||| ||||||    
T  18013529 tactccctccgtcccgtaatagatgacccatttgaaaatgtgcaattttgacataatttactttgatcatatt 18013457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 28959058 - 28958986
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||  |||||| |||| || ||| ||||| ||||||||||||||| |||||||||||||||||    
T  28959058 tactccctccgtctcgcaatagatgatctatttaaaaatttgcaattttgacctagcttactttgaccatatt 28958986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 32961246 - 32961318
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| | ||||| |||||| ||||||  ||| ||||| |||||||||||||||||||| ||||||||||||    
T  32961246 tactcctttcgtcccgcaatagatgacccatttaaaaatttgcaattttgacctaacttagtttgaccatatt 32961318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 26759496 - 26759551
Alignment:
Q  204 aataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||| || ||| ||||| || ||||||||||||||||||||||||||||||    
T  26759496 aataaatgatctatttaaaaatttgtaattttgacctaacttactttgaccatatt 26759551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 43370313 - 43370356
Alignment:
Q  209 atgacctgtttgaaaatgtgcaattttgacctaacttactttga 252  Q
    ||||||| |||||||||||||||||||||| |||||||||||||    
T  43370313 atgacctatttgaaaatgtgcaattttgacataacttactttga 43370356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 259
Target Start/End: Complemental strand, 52094156 - 52094081
Alignment:
Q  184 aattactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||| ||||||| | |||||| |||||   ||||||||| ||||||||||| |||||||| ||||||||||||    
T  52094156 aattacttcctccgttccgcaatagatgactcatttgaaaatttgcaattttgatctaacttaatttgaccatatt 52094081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 28229104 - 28229038
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgac 253  Q
    ||||||||||||||| ||||| ||||||| ||||||||||| || | |||||||||| || ||||||    
T  28229104 tactccctccgtcctacaatagatgacctatttgaaaatgttcactattgacctaacatattttgac 28229038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 1334351 - 1334282
Alignment:
Q  190 tccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||| | |||||| ||||||  |||||||||||| |||||||| |||||||| ||| ||||||||    
T  1334351 tccctccgttccgcaatagatgacccatttgaaaatgtgtaattttgatctaacttaattttaccatatt 1334282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 43394610 - 43394545
Alignment:
Q  194 tccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||| ||||  |||||  |||||||||||||||||| ||| |||||||| ||||||||||||    
T  43394610 tccgtcctacaattgatgactcgtttgaaaatgtgcaattctgatctaacttattttgaccatatt 43394545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 49818788 - 49818829
Alignment:
Q  218 ttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||| |||||||||||||||| ||||||||||||||||    
T  49818788 ttgaaaatttgcaattttgacctaatttactttgaccatatt 49818829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 4464881 - 4464953
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||| |||| || ||||||||| |||||| || |||||  ||||||||| ||||||    
T  4464881 tactccctccgtcccgcaatagatgatctatttgaaaatttgcaatgttaacctagtttactttgatcatatt 4464953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 259
Target Start/End: Original strand, 29588415 - 29588445
Alignment:
Q  229 caattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||||||||||||||||||    
T  29588415 caattttgacctaacttactttgaccatatt 29588445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 36594448 - 36594406
Alignment:
Q  217 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||    
T  36594448 tttgaaaatgtgtaattttgacctaacttattttgatcatatt 36594406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 47069406 - 47069472
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgac 253  Q
    ||||||||||||||  ||||| |||||   ||||||||| | ||||||||||||||| |||||||||    
T  47069406 tactccctccgtcccacaatagatgacacatttgaaaattttcaattttgacctaacctactttgac 47069472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 50035077 - 50035139
Alignment:
Q  194 tccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccat 256  Q
    ||||||| |||||| |||||  |||| |||| |  ||||||||||||||||||||||||||||    
T  50035077 tccgtcccgcaatagatgactcgtttaaaaagggacaattttgacctaacttactttgaccat 50035139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 3804455 - 3804512
Alignment:
Q  202 gcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| ||||||  ||||||||||| ||||||||| |||| ||||||||| ||||||    
T  3804455 gcaatacatgacccatttgaaaatgtacaattttgatctaatttactttgatcatatt 3804512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 21489925 - 21489990
Alignment:
Q  194 tccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||  |||| ||||||| |||||||||||| | | |||||||||| |||||||||| ||||    
T  21489925 tccgtcctaaaatagatgacctatttgaaaatgtggactattgacctaacatactttgaccgtatt 21489990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 47340128 - 47340071
Alignment:
Q  202 gcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| ||||||  |||||| |||||||||||||| |||| ||||||||| ||||||    
T  47340128 gcaatatatgacccatttgaagatgtgcaattttgatctaatttactttgatcatatt 47340071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 252
Target Start/End: Complemental strand, 1325588 - 1325541
Alignment:
Q  202 gcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttga 252  Q
    ||||||||||||   ||||||||| ||||||||| ||||||||||||||||    
T  1325588 gcaataaatgac---tttgaaaatttgcaattttaacctaacttactttga 1325541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 33462704 - 33462768
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 250  Q
    ||||||| |||||||||||||| || ||   ||| ||||||| ||||||||| ||||||||||||    
T  33462704 ttactccatccgtcctgcaatagataactcatttaaaaatgtacaattttgatctaacttacttt 33462768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 45299316 - 45299390
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45299316 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 45299390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 8251217 - 8251145
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8251217 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgatctaacttactttgaccatatt 8251145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 10100581 - 10100509
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10100581 tactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 10100509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 10124108 - 10124181
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10124108 ttactccatccatcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 10124181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 52749281 - 52749353
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  52749281 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaatttttacctaacttattttgaccatatt 52749353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 1821698 - 1821624
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||| |||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  1821698 attactccctccgtccggcaatagatggcctatttgaaaatgtgcaattttgacctaacttactttgaccatatt 1821624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 6017517 - 6017445
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||| ||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  6017517 tacttcctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgatctaacttactttgaccatatt 6017445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 8048818 - 8048744
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| |||| ||||||||||||    
T  8048818 attactccctccgtcctgcaatagatgacctatttgaaaatttgcaattttgacctagcttattttgaccatatt 8048744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 26543874 - 26543940
Alignment:
Q  193 ctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  26543874 ctccgtcccgcaataaatgatctgtttgaaaatgtacaattttgacctaacttactttgaccatatt 26543940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 5606459 - 5606387
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||||||| ||||||||    
T  5606459 tactccctccgtcccgcaataaatgacctatttgaaaaagtgcaattttgatctaacttactttaaccatatt 5606387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 7075398 - 7075326
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||| ||| |||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||    
T  7075398 tactccctccatcccgcaataaatgacttgtttgaaaacgtgcaattttgatctaacttactttgaccatatt 7075326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 41414203 - 41414275
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||||||||| || |||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  41414203 tactccctccgtcctgcaatagattacctatttgaaaatttgcaattttgacctagcttactttgaccatatt 41414275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 41855789 - 41855717
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| | |||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  41855789 tactccctccgtcccgtaataaatgacctatttgaaaatttgcaattttgacctagcttactttgaccatatt 41855717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 44240519 - 44240591
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||    
T  44240519 tactccctccgtcccgcaataaatgacctatttaaaaatttgcaattttgacctagcttactttgaccatatt 44240591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 48389080 - 48389138
Alignment:
Q  201 tgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  48389080 tgcaataaatgacctatttgaaaatttgcaattttgacctagcttactttgaccatatt 48389138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 5945765 - 5945837
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||||||| ||| ||| ||| ||||||||    
T  5945765 tactctctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacataatttattttaaccatatt 5945837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 28490160 - 28490232
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||| ||||||| ||||||||| |||||||||||| ||  ||||||||||||||||    
T  28490160 tactccctccgtcccgcaatagatgacctatttgaaaatttgcaattttgacatagtttactttgaccatatt 28490232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 29253479 - 29253551
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| ||||||| |||||| |||| || ||||||||| ||||||||||||||| |||||||||||||||||    
T  29253479 tactccatccgtcccgcaatagatgatctatttgaaaatttgcaattttgacctagcttactttgaccatatt 29253551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 31932246 - 31932174
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||| |||| || ||||||||| |||||||||||||||  ||||||||||||||||    
T  31932246 tactccctccgtcccgcaatagatgatctatttgaaaatttgcaattttgacctagtttactttgaccatatt 31932174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 259
Target Start/End: Original strand, 44452197 - 44452267
Alignment:
Q  189 ctccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||| |||| |||||| ||| ||  |||||||||||| ||||||||||||||||||||||||||||||    
T  44452197 ctccctctgtcccgcaatagatgtcccatttgaaaatgtgtaattttgacctaacttactttgaccatatt 44452267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 36035686 - 36035758
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| ||| | |||||||||||||||||||| |||||||| |||||||| |||| ||||||||| ||||||    
T  36035686 tactccttccattctgcaataaatgacctgtttaaaaatgtgtaattttgatctaatttactttgatcatatt 36035758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 47912273 - 47912353
Alignment:
Q  179 aaaagaattactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||| |||| |||||||||| || |||| ||| |||||||| ||||||||| ||| ||| ||||||||||||    
T  47912273 aaaagaattactctctccatcctgcaatagattacctctttaaaaatgtgtaattttgacataatttattttgaccatatt 47912353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 31651960 - 31651897
Alignment:
Q  196 cgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||| |||||||||||||| ||||||||||||||||||| ||||  |||| ||||||||||||    
T  31651960 cgtcccgcaataaatgacctatttgaaaatgtgcaattttaacctggcttaatttgaccatatt 31651897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 23393239 - 23393304
Alignment:
Q  194 tccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||||||||| ||| ||||| ||||||||| | |||  ||||||||||||||||    
T  23393239 tccgtcctgcaataaatgacctatttaaaaatttgcaattttaaactagtttactttgaccatatt 23393304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 44741358 - 44741415
Alignment:
Q  202 gcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||| | |||||| |||||||||||||| |||||||| ||||||||||||    
T  44741358 gcaataaatgacatatttgaatatgtgcaattttgatctaacttattttgaccatatt 44741415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 2126652 - 2126724
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||| | | |||||| ||||| | ||| |||||||| ||||||||||||| ||||||||||||||||    
T  2126652 tactccctccattccgcaatagatgacttatttaaaaatgtgtaattttgacctaatttactttgaccatatt 2126724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 12685966 - 12685894
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||| ||||| | |||| |||||| |||||||||||||||||||||| |||| ||| ||||| ||||||    
T  12685966 tactcccttcgtcccgtaatagatgacccgtttgaaaatgtgcaattttgatctaatttattttgatcatatt 12685894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 50014629 - 50014557
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |  ||| ||||| | ||||||||| ||||||||||| ||| |||||||||||||||||    
T  50014629 tactccctccgtcccgtcatagatgacttatttgaaaatttgcaattttgatctagcttactttgaccatatt 50014557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 10648252 - 10648197
Alignment:
Q  204 aataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||| |||| || |||||||||||| ||||||||||||||||| ||||||||||||    
T  10648252 aatagatgatctatttgaaaatgtgtaattttgacctaacttattttgaccatatt 10648197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 41855869 - 41855797
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||| ||||| || |||| |||||||||| ||| | || ||||||| || ||||||||||||    
T  41855869 tactccctccgtcctacaatagataacctatttgaaaatgagcattattaacctaacatattttgaccatatt 41855797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 43453233 - 43453161
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||| || |||||   |||| | ||||| ||||||||||||||||| ||||||||||||    
T  43453233 tactccctccgtcccgcattagatgactcatttgcagatgtgtaattttgacctaacttattttgaccatatt 43453161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 52688559 - 52688595
Alignment:
Q  217 tttgaaaatgtgcaattttgacctaacttactttgac 253  Q
    |||||||||||| ||||||||||||||||||||||||    
T  52688559 tttgaaaatgtggaattttgacctaacttactttgac 52688595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 33730232 - 33730190
Alignment:
Q  217 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||    
T  33730232 tttgaaaatgtgtaattttgacataacttactttaaccatatt 33730190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 40883445 - 40883483
Alignment:
Q  221 aaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||| ||||||||||||||||||||||| ||||||    
T  40883445 aaaatgtgaaattttgacctaacttactttgatcatatt 40883483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 48312029 - 48312093
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttga 252  Q
    ||||||||| |||| |||||| ||||||  |||||||||||||||||||| | ||||||| |||||    
T  48312029 tactccctcagtcccgcaatagatgacca-tttgaaaatgtgcaattttggcttaacttattttga 48312093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 23337827 - 23337879
Alignment:
Q  207 aaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||  ||||||||| || || |||||||||||||| ||||||||||||    
T  23337827 aaatgacccatttgaaaatttgtaaatttgacctaacttagtttgaccatatt 23337879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 5376 - 5448
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5376 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 5448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 5e-31; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 1098175 - 1098247
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1098175 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 1098247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 14633007 - 14633079
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14633007 tactccctccgtcctgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 14633079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 20040480 - 20040407
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20040480 ttactccctccgtcccgtaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 20040407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 1781209 - 1781137
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1781209 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaagttactttgaccatatt 1781137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 19344763 - 19344691
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19344763 tactccttccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttattttgaccatatt 19344691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 31191241 - 31191169
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  31191241 tactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaatttactttgaccatatt 31191169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 40316818 - 40316890
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  40316818 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttacttcgaccatatt 40316890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 41410723 - 41410651
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  41410723 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttacttcgaccatatt 41410651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 13548212 - 13548285
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13548212 ttactccctccgtcccttaataagtgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 13548285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 20022875 - 20022932
Alignment:
Q  202 gcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20022875 gcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 20022932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 1831351 - 1831423
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||    
T  1831351 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacataatttacttcgaccatatt 1831423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 30211799 - 30211733
Alignment:
Q  193 ctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  30211799 ctccgtcccgcaataaatgacctgtttaaaaatgtgcaattttgatctaacttactttgaccatatt 30211733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 14057711 - 14057780
Alignment:
Q  190 tccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||    
T  14057711 tccctccgtcccgcaataaatgatctgtttgaaaatatgcaattttgacctaacttactttgatcatatt 14057780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 14607618 - 14607549
Alignment:
Q  190 tccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||    
T  14607618 tccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaatttaatttgaccatatt 14607549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 30721750 - 30721677
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||| ||| |||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||    
T  30721750 ttactccctccatcccgcaataaatgacatatttgaaaatgtgcaattttgacctaacttattttgaccatatt 30721677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 40079972 - 40080053
Alignment:
Q  178 aaaaagaattactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||| |||||||||||||||||| ||||| ||||||| ||||||||| | ||||||| |||||||||||||||||||||||    
T  40079972 aaaaaaaattactccctccgtcctacaatagatgacctatttgaaaatttacaattttaacctaacttactttgaccatatt 40080053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 41263193 - 41263121
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||  ||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||    
T  41263193 tactccctccgtccctcaataaatgatatgtttaaaaatgtgcaattttgacctaacttactttgaccatatt 41263121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 8627142 - 8627207
Alignment:
Q  194 tccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||| |||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  8627142 tccgtcccgcaatagatgacctatttgaaaatgtgcaattttgatctaacttactttgaccatatt 8627207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 27675540 - 27675612
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||||||||| | ||||||||| ||||||||||||||| |||||||||| ||||||    
T  27675540 tactccctccgtcccgcaataaatgacttatttgaaaatttgcaattttgacctagcttactttgatcatatt 27675612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 30788205 - 30788277
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| | |||| ||||||  |||||||||||| ||||||||| ||||||||||||||||||||    
T  30788205 tactccctccgtcccgtaatatatgacccatttgaaaatgtgtaattttgacataacttactttgaccatatt 30788277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 33402655 - 33402583
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| | |||| |||| |||||| |||||||| ||||||||||||||||||||||| ||||||    
T  33402655 tactccctccgtcccgtaatagatgatctgtttaaaaatgtgtaattttgacctaacttactttgatcatatt 33402583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 9936954 - 9936880
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||| |||||||||||  | ||| ||||||||||||||||| |||| ||| ||||||||||||    
T  9936954 attactccctccgtcccgcaataaatgatatatttaaaaatgtgcaattttgatctaatttattttgaccatatt 9936880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 10465360 - 10465287
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||| ||| |||||| ||||||| ||||||||| |  |||||||||||| |||||||||||||||||    
T  10465360 ttactccctccctcccgcaatagatgacctatttgaaaatttataattttgacctatcttactttgaccatatt 10465287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 34347482 - 34347539
Alignment:
Q  202 gcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| ||||||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  34347482 gcaatagatgacctatttgaaaatgtgtaattttgacataacttactttgaccatatt 34347539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 259
Target Start/End: Complemental strand, 2551694 - 2551619
Alignment:
Q  184 aattactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||| |||| |||||| |||| ||||||  ||| |||||||||||||||||||||||||| ||| ||||||||    
T  2551694 aattacttcctcagtcctgaaatagatgacccatttaaaaatgtgcaattttgacctaacttattttaaccatatt 2551619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 2799648 - 2799697
Alignment:
Q  204 aataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgac 253  Q
    |||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  2799648 aatagatgacccatttgaaaatgtgcaattttgacctaacttactttgac 2799697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 41042886 - 41042829
Alignment:
Q  202 gcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||| |||| ||||||||| ||||||||||| ||| |||||||||||||||||    
T  41042886 gcaataaataacctatttgaaaatttgcaattttgatctagcttactttgaccatatt 41042829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 39925203 - 39925275
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||| |||| |  ||||||||| || |||||||||| || ||||||||||||||||    
T  39925203 tactccctccgtcccgcaatagatgatccatttgaaaatttgtaattttgaccaaatttactttgaccatatt 39925275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 2805814 - 2805863
Alignment:
Q  204 aataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgac 253  Q
    |||| ||||||  |||||||||||||||||||||||||| ||||||||||    
T  2805814 aatagatgacccatttgaaaatgtgcaattttgacctaatttactttgac 2805863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 34169832 - 34169901
Alignment:
Q  190 tccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||| ||||| |||||| |||| || ||||||||| ||||||||||| |||  ||||||||||||||||    
T  34169832 tcccttcgtcccgcaatagatgatctatttgaaaatttgcaattttgatctagtttactttgaccatatt 34169901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 32110736 - 32110664
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||| | |||||| || | |  ||||||||||||||||||||| |||| ||||||||||| ||||    
T  32110736 tactccctccgttccgcaatagataatccatttgaaaatgtgcaattttgatctaatttactttgaccgtatt 32110664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 967222 - 967264
Alignment:
Q  217 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||| |||||||||||||||||||||||| || |||||    
T  967222 tttgaaaatttgcaattttgacctaacttactttaactatatt 967264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 20503078 - 20503040
Alignment:
Q  221 aaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  20503078 aaaatgtgtaattttgacctaacttacttagaccatatt 20503040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 28142958 - 28143000
Alignment:
Q  217 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||||||| | |||| ||||||||||||||||    
T  28142958 tttgaaaatgtgcaattttaatctaatttactttgaccatatt 28143000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 14139935 - 14140007
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||| |||| |||||| |||| ||  |||||||| ||||||||||| |||  ||||||||| ||||||    
T  14139935 tactccctctgtcccgcaatagatgatctaattgaaaatttgcaattttgatctagtttactttgatcatatt 14140007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 32474086 - 32474014
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||| ||||||   |||| ||||||  |||||||||||| |||||| || ||||||| ||||||||||||    
T  32474086 tactccccccgtccaaaaatagatgacccatttgaaaatgtgtaattttaacataacttattttgaccatatt 32474014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 7e-30; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 38069049 - 38069123
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38069049 attactccctccgttccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 38069123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 16807210 - 16807138
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16807210 tactccctccgtcccgtaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 16807138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 187 - 257
Target Start/End: Complemental strand, 25274081 - 25274011
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccata 257  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25274081 tactccatccgtcctgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccata 25274011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 36819614 - 36819688
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  36819614 attactccctccgttccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgatcatatt 36819688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 30462285 - 30462213
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  30462285 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacttaacttactttgaccatatt 30462213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 35693894 - 35693822
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35693894 tactccctccgtcgcgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttcgaccatatt 35693822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 37101090 - 37101018
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  37101090 tactccctccgtcccgcaatagatgacctatttgaaaatgtgtaattttgacctaacttactttgaccatatt 37101018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 40231928 - 40232000
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  40231928 tactccctccgtcccgtaataaataacctgtttgaaaatgtgcaattttgacctaatttattttgaccatatt 40232000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 46242544 - 46242472
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||| ||||||||||||  ||||   |||||||||||||||||||||||||||||||||||||||||||    
T  46242544 tactcccttcgtcctgcaatatttgactcatttgaaaatgtgcaattttgacctaacttactttgaccatatt 46242472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 259
Target Start/End: Complemental strand, 32972394 - 32972319
Alignment:
Q  184 aattactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||| ||| |||||| ||||||| ||||||||| ||||| ||||||||| |||||||||||||||||    
T  32972394 aattactccctccctcccgcaatagatgacctatttgaaaatttgcaagtttgacctagcttactttgaccatatt 32972319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 28016115 - 28016187
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||| ||||||| | |||||  ||||||||||||||||||||| |||||||||||||||||||||    
T  28016115 ttactccctccgttctgcaatga-tgacccatttgaaaatgtgcaattttgatctaacttactttgaccatatt 28016187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 38850718 - 38850774
Alignment:
Q  203 caataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||| ||||||  |||||||||||| ||||||||||||||||||||||||||||||    
T  38850718 caatagatgacccatttgaaaatgtgtaattttgacctaacttactttgaccatatt 38850774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 47713479 - 47713424
Alignment:
Q  204 aataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||| ||||||  |||||||||||||||||||||||||||||||||||||| ||||    
T  47713479 aatagatgacccatttgaaaatgtgcaattttgacctaacttactttgaccgtatt 47713424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 4620097 - 4620139
Alignment:
Q  217 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  4620097 tttgaaaatgtgtaattttgacctaacttactttgaccatatt 4620139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 35265881 - 35265823
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaactt 245  Q
    |||||||||||||| | |||||||||| ||||| ||||||| |||||||||||||||||    
T  35265881 tactccctccgtcccgtaataaatgacttgtttaaaaatgtacaattttgacctaactt 35265823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 40818754 - 40818689
Alignment:
Q  194 tccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||| | |||| |||| || ||||||||||||||||||||| |||||||||| ||||||||||    
T  40818754 tccgtcccgtaatagatgatctatttgaaaatgtgcaattttgatctaacttactctgaccatatt 40818689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 7314409 - 7314337
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||| ||||| |||| || ||||| ||| |||| | |||||||||| |||||||||||||||    
T  7314409 tactccctccgtcctacaatagatgatctatttgagaatttgcactattgacctaacatactttgaccatatt 7314337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 9173400 - 9173328
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||| | | |||| ||||||  ||| |||| ||| ||||||||||||||||||||||||||||||    
T  9173400 tactccctccgttccggaatagatgaccaatttaaaaacgtgtaattttgacctaacttactttgaccatatt 9173328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 31496679 - 31496637
Alignment:
Q  217 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||| |||||||||||||||||||||||||| ||||    
T  31496679 tttgaaaatgtacaattttgacctaacttactttgaccgtatt 31496637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 38441843 - 38441885
Alignment:
Q  217 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  38441843 tttgaaaatgtgtaatttttacctaacttactttgaccatatt 38441885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 39982117 - 39982171
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgaccta 241  Q
    |||||||| |||||||||||||||||||| ||| | |||||||||| ||||||||    
T  39982117 tactcccttcgtcctgcaataaatgacctattttataatgtgcaatattgaccta 39982171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 3124213 - 3124144
Alignment:
Q  184 aattactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgac 253  Q
    |||||||| ||||||||||||||| |||||   |||||||||||| |||||||| |||| | ||||||||    
T  3124213 aattactctctccgtcctgcaatagatgactcatttgaaaatgtgtaattttgatctaattgactttgac 3124144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 18756599 - 18756671
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| ||||| | | |||| ||||||  ||||||||| ||||||||||||||| ||||||||||| |||||    
T  18756599 tactccatccgttccgtaatagatgacccatttgaaaatatgcaattttgacctatcttactttgactatatt 18756671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 42493517 - 42493589
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||  ||||| ||||||| ||||| |||||||    |||||||||| |||||||||||||||    
T  42493517 tactccctccgtcccacaatagatgacctatttgacaatgtgcgcgattgacctaacatactttgaccatatt 42493589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 9136728 - 9136654
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||| ||| |||||| |||| |  ||||| |||||| ||||||||||||  ||| ||||||||||||    
T  9136728 attactccctccatcccgcaatagatgatccatttgataatgtgtaattttgacctagtttattttgaccatatt 9136654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 40665834 - 40665760
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||| ||||| | |||||| ||||  | ||||||||| || ||||||||| || |||||||||||||||||    
T  40665834 attactccttccgttccgcaatagatgatttatttgaaaatttgtaattttgacttagcttactttgaccatatt 40665760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 41007986 - 41007948
Alignment:
Q  221 aaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  41007986 aaaatatgtaattttgacctaacttactttgaccatatt 41007948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 33376775 - 33376847
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||| |||| |||||| |||| |  ||||||| | |  ||||||||||||||||||||||||| ||||    
T  33376775 tactccctctgtcccgcaatagatgatccatttgaaattttttaattttgacctaacttactttgaccgtatt 33376847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 7e-30; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 31152659 - 31152733
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31152659 attactccctccgtcccacaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 31152733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 10384848 - 10384920
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10384848 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaaccatatt 10384920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 37667837 - 37667765
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37667837 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttactttgaccatatt 37667765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 40411672 - 40411600
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40411672 tactccctccgtcccgtaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 40411600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 55631938 - 55631866
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  55631938 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttattttgaccatatt 55631866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 46608211 - 46608285
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46608211 attacttcctccgtcccgcaataaatgacctgtttgaaaatgtgaaattttgacctaacttactttgaccatatt 46608285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 48380472 - 48380545
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  48380472 ttactccctccgtcccgcaataagtgacctgtttgaaaatgtgcatttttgacctaacttactttgaccatatt 48380545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 43447165 - 43447237
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  43447165 tactccctccgtcccgtaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 43447237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 39170963 - 39171030
Alignment:
Q  192 cctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39170963 cctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttattttgaccatatt 39171030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 3708253 - 3708325
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  3708253 tactccctccgtcccacaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgatcatatt 3708325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 39332893 - 39332821
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  39332893 tactccctccgtcacgcaataaatgatctgtttgaaaatgtgcaattttgaactaacttactttgaccatatt 39332821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 31657421 - 31657347
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||| |||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||    
T  31657421 attactccctccgtcccgcaataaatgacctatttaaaaatttgcaattttgacctagcttactttgaccatatt 31657347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 8525480 - 8525407
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||   |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  8525480 ttactccctccgtcccataataaatgacctgtttgaaaatatgcaattttgacctaacttactttgatcatatt 8525407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 43047387 - 43047459
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||| ||||| ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  43047387 tacttcctccatcccgcaataaatgacttgtttgaaaatgtgcaattttaacctaacttactttgaccatatt 43047459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 6520432 - 6520507
Alignment:
Q  184 aattactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||| ||||||| |||||||||||||| ||||||||| ||||||||||||||| ||||||||||| |||||    
T  6520432 aattactccatccgtcccgcaataaatgacctatttgaaaatttgcaattttgacctagcttactttgactatatt 6520507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 1377503 - 1377575
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||  |||| |||||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  1377503 tactccctttgtcccgcaataaacgacctatttgaaaatttgcaattttgacctatcttactttgaccatatt 1377575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 28914368 - 28914440
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||| | ||||||||| | |||||| ||||| | |||||||||||||||||||||||||||||||    
T  28914368 tactccctccgttccgcaataaataaactgtttcaaaatttacaattttgacctaacttactttgaccatatt 28914440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 187 - 258
Target Start/End: Complemental strand, 28899134 - 28899063
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatat 258  Q
    ||||||||| |||| |||||| ||||||| ||||||||| |||||||||||||||  |||||||||||||||    
T  28899134 tactccctctgtcccgcaatagatgacctatttgaaaatttgcaattttgacctagtttactttgaccatat 28899063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 42185271 - 42185346
Alignment:
Q  184 aattactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||||| |||||| |||| |  ||||||||| |||||||||||||||| ||| ||||||||||||    
T  42185271 aattactccctccgtcccgcaatagatgatccatttgaaaatttgcaattttgacctaatttagtttgaccatatt 42185346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 48336489 - 48336426
Alignment:
Q  189 ctccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttga 252  Q
    |||||||||||| |||||| |||||   ||||||||||||||||||||||||||||||||||||    
T  48336489 ctccctccgtcccgcaatagatgacacatttgaaaatgtgcaattttgacctaacttactttga 48336426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 1613275 - 1613209
Alignment:
Q  193 ctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||| | |||| ||||||| |||||||||||| ||||||||||||| ||||||||||||||||    
T  1613275 ctccgtcccgtaatagatgacctatttgaaaatgtgtaattttgacctaatttactttgaccatatt 1613209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 33394075 - 33394149
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| |||||||||  |||||  |||||  ||| |||||||||||||||||||||||||||||||||||||||    
T  33394075 attacttcctccgtcccacaataggtgacccatttaaaaatgtgcaattttgacctaacttactttgaccatatt 33394149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 258
Target Start/End: Complemental strand, 24334444 - 24334373
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatat 258  Q
    ||||||||  |||| |||||| ||||||| ||||||||| |||||||||||||||  |||||||||||||||    
T  24334444 tactccctttgtcccgcaatagatgacctatttgaaaatttgcaattttgacctagtttactttgaccatat 24334373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 29821080 - 29821122
Alignment:
Q  217 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  29821080 tttgaaaatgtgcaattttgatctaacttactttgaccatatt 29821122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 39376937 - 39376863
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||| |||||| ||||| |  |||||||| |||||||||||||||  |||||||||| |||||    
T  39376937 attactccctccgtcccgcaatagatgacttagttgaaaatttgcaattttgacctagtttactttgacaatatt 39376863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 23605965 - 23605893
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||| |||| ||| ||||||||||| || ||||||||| | ||||||||||||| |||||||||| ||||||    
T  23605965 tactctctccatcccgcaataaatgatctatttgaaaatttacaattttgacctagcttactttgatcatatt 23605893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 28988457 - 28988385
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||| |||| |||||| ||||||| ||||||||| || ||| ||||||||  ||||||||||||||||    
T  28988457 tactccctcagtcccgcaatagatgacctatttgaaaatttgtaatgttgacctagtttactttgaccatatt 28988385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 4860143 - 4860078
Alignment:
Q  184 aattactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 250  Q
    |||||||| ||||||||| ||||| ||||||| ||||||| |||||||| ||||||||| |||||||    
T  4860143 aattactctctccgtcctacaatagatgacctatttgaaa-tgtgcaatattgacctaagttacttt 4860078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 47834177 - 47834135
Alignment:
Q  217 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||| ||||||||| ||||||||||||||||||||    
T  47834177 tttgaaaatgtgtaattttgacataacttactttgaccatatt 47834135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 53987845 - 53987771
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| |||| ||||| ||||| |||| |  ||| |||||||||||| || |||||||||||||||||||||||    
T  53987845 attacttcctctgtcctacaatagatgatccatttaaaaatgtgcaatattaacctaacttactttgaccatatt 53987771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 18881420 - 18881348
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||| ||||| ||||||| |||||||||||| | | ||||| |||  ||||||||| |||||    
T  18881420 tactccctccgtcctacaatagatgacctatttgaaaatgtgaactattgacttaatatactttgactatatt 18881348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 37164017 - 37164088
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||| |||||  |||| ||||||  ||||||||| | ||||||||||||||||||||||||| |||||    
T  37164017 tactccctctgtcctt-aatagatgacccatttgaaaatatacaattttgacctaacttactttgactatatt 37164088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 44210149 - 44210221
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||||||||||| ||| ||| | |||||||||||  |   ||||||||||||||||    
T  44210149 tactccctccgtcccgcaataaatgacctatttaaaattttgcaattttgatatggattactttgaccatatt 44210221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 1981415 - 1981373
Alignment:
Q  217 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||| || |||||||| |||||||||||||||||||||    
T  1981415 tttgaaaatttgtaattttgatctaacttactttgaccatatt 1981373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 25644620 - 25644548
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||| |||||||||||||  |||| ||| | || | ||||| |||  |||||||||||||||    
T  25644620 tactccctccgtccttcaataaatgacctagttgacaatatacattattgacttaatatactttgaccatatt 25644548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 7724672 - 7724602
Alignment:
Q  189 ctccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7724672 ctccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 7724602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 12208988 - 12209061
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12208988 ttacttcctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 12209061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 8373434 - 8373506
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8373434 tactccctctgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 8373506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 31603477 - 31603407
Alignment:
Q  189 ctccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31603477 ctccctccgtcccacaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacaatatt 31603407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 16126146 - 16126073
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  16126146 ttactctctccgtcccgcaataaatgacccatttgaaaatgtgcaattttgacctaacttactttgaccatatt 16126073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 16333479 - 16333552
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  16333479 ttactctctccgtcccgcaataaatgacccatttgaaaatgtgcaattttgacctaacttactttgaccatatt 16333552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 16127842 - 16127771
Alignment:
Q  188 actccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||    
T  16127842 actccctccgtcccgcaataaatgacctatttgaaaatgtgtaattttgacctaacttactttgatcatatt 16127771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 38963793 - 38963867
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||| ||||   ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38963793 attactccctctgtcccttaataagtgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 38963867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 40471736 - 40471808
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||| ||||| ||||||    
T  40471736 tactccctccgtcccgcaataaataacctgtttgaaaatgtgcaattttgacttaacttattttgatcatatt 40471808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 41575562 - 41575634
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||||||||||||| |||||||||| ||||||    
T  41575562 tactccctccgtcccgcaataaatgacctatttgaaaatttgcaattttgacctagcttactttgatcatatt 41575634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 10333643 - 10333569
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||  | ||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||    
T  10333643 attactccctccgtctcgtaataaatgatctgtttgaaaatgtgtaattttgacctaacttattttgaccatatt 10333569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 5096247 - 5096320
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||| ||||||||| |||||||||||||||| |||||||||| ||||||| ||||| ||||||    
T  5096247 ttactccctccgtcccgcaataaattacctgtttgaaaatgtacaattttgacataacttattttgatcatatt 5096320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 8896271 - 8896343
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||| | | |||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  8896271 tactccctccattccgcaatagatgacccatttgaaaatgtgcaattttgacctaacttactttgaccatatt 8896343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 41436832 - 41436904
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| | |||||||||  |||||||||||||  ||||||||||||||||||||||||||||||    
T  41436832 tactccctccgtcccgtaataaatgaaatgtttgaaaatgtataattttgacctaacttactttgaccatatt 41436904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 11277566 - 11277623
Alignment:
Q  202 gcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||    
T  11277566 gcaataaatgacctatttgaaaatgtgcaattttgacataacttactttgatcatatt 11277623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 4137410 - 4137481
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||||||||| ||||||||||||| ||||||||| |||| ||| ||||| ||||||    
T  4137410 tactccctccgtcccgcaataaatgacatgtttgaaaatgtacaattttgatctaattta-tttgatcatatt 4137481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 6730166 - 6730094
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||  |||||| |||||||  |||||||| ||||||||||||||| ||||| |||||||||||    
T  6730166 tactccctccgtctcgcaatagatgacctacttgaaaatttgcaattttgacctagcttacattgaccatatt 6730094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 22718606 - 22718534
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||| |||||||  | ||||||||| || ||||||||| ||||||||||||||| |||||||||||||||||    
T  22718606 tactctctccgtcgcgtaataaatgatctatttgaaaatttgcaattttgacctagcttactttgaccatatt 22718534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 45036363 - 45036435
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||||||||| ||||||  ||| |||||||| ||||||||| ||||||||  ||||||||||    
T  45036363 tactccctccgtcctgcaatagatgacccatttaaaaatgtgtaattttgacttaacttacgctgaccatatt 45036435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 258
Target Start/End: Original strand, 37316876 - 37316947
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatat 258  Q
    |||||||||||||| |||||  ||||||| ||||||||| ||||||||||||||   |||||||||||||||    
T  37316876 tactccctccgtcccgcaatcgatgacctatttgaaaatttgcaattttgacctggtttactttgaccatat 37316947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 37987982 - 37987927
Alignment:
Q  204 aataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||||||| ||||||    
T  37987982 aataaatgacctgtttgaaaatgcgcaattttgatctaagttactttgatcatatt 37987927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 44022265 - 44022340
Alignment:
Q  184 aattactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||| | |||| ||||||| ||||   |||||||||||||||||||| ||||||||||||||||| |||||    
T  44022265 aattactccattcgtcatgcaatagatgattcgtttgaaaatgtgcaattttaacctaacttactttgactatatt 44022340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 18504470 - 18504544
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| ||||||||| | |||| ||||| | |||||||||||| ||||||||| ||||||| ||||||||||||    
T  18504470 attacttcctccgtcccgtaatagatgacttatttgaaaatgtgtaattttgacgtaacttattttgaccatatt 18504544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 20682653 - 20682726
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||| ||||||  |||||| ||| ||||| ||||||||||||| | ||||||||||| |||||    
T  20682653 ttactccctccgtcccgcaatagttgacctatttaaaaatttgcaattttgacccagcttactttgacaatatt 20682726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 25766443 - 25766516
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||| ||||||||| |||| |||| ||||||||||||||||| | |||||||||  ||||| |||||||||    
T  25766443 ttactccttccgtcctgtaatagatgatctgtttgaaaatgtgcactattgacctaatatacttcgaccatatt 25766516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 2831707 - 2831779
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||| |||| | || |||||||| |  ||| |||||||| ||||||||||||||||||||||||||||||    
T  2831707 tactcccaccgtaccgcgataaatgatccatttaaaaatgtgtaattttgacctaacttactttgaccatatt 2831779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 16646244 - 16646318
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||| |||||| ||||  |||||||||| || ||| ||||| || |||||||||||| |||||||||||||||||    
T  16646244 attattccctcagtcccacaataaatgagctatttaaaaatttgtaattttgacctagcttactttgaccatatt 16646318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 25762193 - 25762266
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||||  |||| |||| ||||||||||||||||| | |||||||||  ||||| |||| ||||    
T  25762193 ttactccctccgtcctataatagatgatctgtttgaaaatgtgcactattgacctaatatacttcgaccctatt 25762266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 6075125 - 6075197
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||| ||||||||  |||||| |||||  |||||||||| | |||||||||  ||||||||||||||||||||    
T  6075125 tactacctccgtcgcgcaatagatgactcgtttgaaaattttcaattttgatttaacttactttgaccatatt 6075197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 15177386 - 15177441
Alignment:
Q  204 aataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||| ||||||| ||||||||||| ||||||| |  ||||||||||||||||||||    
T  15177386 aatagatgacctatttgaaaatgtacaattttaatttaacttactttgaccatatt 15177441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 43328834 - 43328792
Alignment:
Q  217 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||  |||||||| |||||||||||||||||||||    
T  43328834 tttgaaaatgtataattttgatctaacttactttgaccatatt 43328792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 30464431 - 30464504
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30464431 ttactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 30464504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 23437874 - 23437802
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  23437874 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttgctttgaccatatt 23437802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 761549 - 761622
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  761549 ttactccctctgtcccgcaataaatgacctgtttgaaaatgtgtaattttgacctaatttactttgaccatatt 761622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 25691659 - 25691586
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||| ||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25691659 ttactccatccgttccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 25691586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 43184841 - 43184768
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||| |||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  43184841 ttactccctccatcctgcaataaatgacctgtttaaaaatgtgttattttgacctaacttactttgaccatatt 43184768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 25009141 - 25009216
Alignment:
Q  184 aattactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||| |||||||||  |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  25009141 aattacttcctccgtccctcaataaatgatctgtttgaaaatgtgcaattttgacctaatttactttgaccatatt 25009216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 14378749 - 14378675
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||| |||||||||||   |||||||||||||||||||||||||||||||||||||| |||||    
T  14378749 attactccctccgtcccgcaataaatgataggtttgaaaatgtgcaattttgacctaacttactttgactatatt 14378675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 4327180 - 4327108
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||| ||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||    
T  4327180 tactccctgcgtcccgcaataaatgacttgtttgaaaatgtgcaattttgatctaacttactttgatcatatt 4327108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 28583364 - 28583292
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||||||||| ||||||||| ||||||    
T  28583364 tactccctccgtcccgcaatagatgacctttttgaaaatgtgcaattttgacctaatttactttgagcatatt 28583292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 37094132 - 37094204
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||| ||||||||| |||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  37094132 tacttcctccgtcccgcaataaatgacctatttgaaaatttgcaattttgacctagcttactttgaccatatt 37094204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 44887776 - 44887704
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| ||||||||||| || |||||||||||||||||||||||| ||||| ||||||||||||    
T  44887776 tactccctccgtcccgcaataaatgatctatttgaaaatgtgcaattttgacctgacttagtttgaccatatt 44887704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 8496949 - 8496875
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||| |||||||||| ||||  |||||  |||||||||||||||||||||||||||||||||||||||||||    
T  8496949 attactctctccgtcctgtaatagttgacccatttgaaaatgtgcaattttgacctaacttactttgaccatatt 8496875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 3466282 - 3466348
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttga 252  Q
    ||||||||||||||| |||||| ||||||  |||||||||| |||||||||||||||||||||||||    
T  3466282 ttactccctccgtcccgcaatagatgacccatttgaaaatgcgcaattttgacctaacttactttga 3466348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 38842161 - 38842235
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaa-tgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||| ||||||||| | ||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  38842161 ttacttcctccgtcccgtaataaatgacctgtttgaaaaatgtgtaattttgacctaacttactttgatcatatt 38842235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 11756775 - 11756848
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||| || | |||||| ||||| | ||||||||| |||||||||||||||||||||||||||||||||    
T  11756775 ttactccctctgttccgcaatagatgacttatttgaaaatttgcaattttgacctaacttactttgaccatatt 11756848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 5777615 - 5777543
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| ||| ||||||||||||||||||||||||||||||| |||||||| ||| |||| ||| ||||||||    
T  5777615 tactccatccatcctgcaataaatgacctgtttgaaaatgtgtaattttgatctatcttattttaaccatatt 5777543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 20671256 - 20671328
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||  |||||| |||| |  |||||||||||| ||||||||||||||||||||||||||||||    
T  20671256 tactccctccgtcgcgcaatagatgatcaatttgaaaatgtgtaattttgacctaacttactttgaccatatt 20671328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 4960151 - 4960223
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| ||||||| | |||| |||| || ||||||||| ||||||||||||||| |||||||||||||||||    
T  4960151 tactccttccgtcccgtaatagatgatctatttgaaaatttgcaattttgacctagcttactttgaccatatt 4960223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 15870175 - 15870247
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| | ||||||| |||||||||||||||  ||||||||| |||| ||||||||| ||||||    
T  15870175 tactccctccgtccagtaataaataacctgtttgaaaatgaacaattttgatctaatttactttgatcatatt 15870247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 40645609 - 40645681
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||| ||| ||  ||||||||| | |||||||||||||||||||||||| ||||||    
T  40645609 tactccctccgtcccgcaatagatggcccatttgaaaattttcaattttgacctaacttactttgatcatatt 40645681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 23547066 - 23547133
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttga 252  Q
    ||||||||||||||||   |||||||||||||||| ||| |||| |||||||| ||||||||||||||    
T  23547066 attactccctccgtcccataataaatgacctgtttaaaattgtgtaattttgatctaacttactttga 23547133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 21132959 - 21132917
Alignment:
Q  217 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  21132959 tttgaaaatgtgcaattttgacttaacttactttgaccatatt 21132917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 17523804 - 17523877
Alignment:
Q  186 ttactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||| ||||| |||| ||||| ||||||  |||||||||||||| |||| |||||||||||||||| ||||||    
T  17523804 ttacttcctccctcctacaatagatgacccatttgaaaatgtgcagttttaacctaacttactttgatcatatt 17523877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 44717296 - 44717368
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||||  |||| |  |||||||||||| |||||||| |||||||||||||| ||||||    
T  44717296 tactccctccgtcccgcaatggatgatccatttgaaaatgtgtaattttgaactaacttactttgatcatatt 44717368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 258
Target Start/End: Original strand, 44361921 - 44361992
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatat 258  Q
    |||||||||  ||| |||||| ||||||| ||||||||| ||||||||||| |||  |||||||||||||||    
T  44361921 tactccctcattcccgcaatagatgacctatttgaaaatttgcaattttgagctagtttactttgaccatat 44361992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 8123653 - 8123714
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaactta 246  Q
    |||||||||||||| |||||||| |||| |  ||| |||||||| |||||||||||||||||    
T  8123653 attactccctccgttctgcaatagatgatccatttaaaaatgtgtaattttgacctaactta 8123714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 29917981 - 29917917
Alignment:
Q  194 tccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||| |||| |  ||| |||||||| ||||||||||||||||| ||||||||||||    
T  29917981 tccgtcctgcaatagatgatccattt-aaaatgtgtaattttgacctaacttattttgaccatatt 29917917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 43049323 - 43049258
Alignment:
Q  194 tccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||| ||||||||||| || ||||||||| || |||||||| ||| || ||||||||||||||    
T  43049323 tccgtcccgcaataaatgatctatttgaaaatttgtaattttgatctagctaactttgaccatatt 43049258  T

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Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 44947018 - 44947082
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttga 252  Q
    |||||||||||||| |||||| ||||||  ||| |||||||||||||||||||||  |||||||||    
T  44947018 tactccctccgtcc-gcaatagatgacccatttaaaaatgtgcaattttgacctattttactttga 44947082  T

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Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 12893789 - 12893717
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||  || |||||||||| ||||| ||| |||| | ||||| |||| |||||||||||||||    
T  12893789 tactccctccgtccctcagtaaatgacctatttgacaatatgcattattgacttaacatactttgaccatatt 12893717  T

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Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 29616387 - 29616315
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||| ||| |||||||| |||  ||||||||| |  |||||||| |||||||||||||| ||||||    
T  29616387 tactccctccgacctacaataaataacccatttgaaaatattaaattttgatctaacttactttgatcatatt 29616315  T

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Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 30653360 - 30653432
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| ||||||| | |||| ||| ||  ||| ||||||||||||||| | |||||||||||||||||||||    
T  30653360 tactccatccgtcccgtaatagatgcccaatttaaaaatgtgcaattttaatctaacttactttgaccatatt 30653432  T

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Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 44039833 - 44039897
Alignment:
Q  195 ccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||||||| |  ||||||||||||||||||||| ||  |||| ||||| ||||||    
T  44039833 ccgtcctgcaataaatgatccatttgaaaatgtgcaattttgatctggcttagtttgatcatatt 44039897  T

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Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 18419028 - 18419070
Alignment:
Q  217 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||| || |||||||||||| |||||||||||||||||    
T  18419028 tttgaaaatttgtaattttgacctagcttactttgaccatatt 18419070  T

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Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 27301860 - 27301934
Alignment:
Q  185 attactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||| ||||||| |||||   ||||||||| | |||||||||  ||| |||||||||| |||||    
T  27301860 attactccctccgtcttgcaatagatgactcatttgaaaatattcaattttgatataatttactttgacaatatt 27301934  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 2026602 - 2026638
Alignment:
Q  217 tttgaaaatgtgcaattttgacctaacttactttgac 253  Q
    |||||||||||  ||||||||||||||||||||||||    
T  2026602 tttgaaaatgtttaattttgacctaacttactttgac 2026638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 13888691 - 13888619
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||| ||||| || |||| |||||||||||||  | ||||  |||| |||||||||| ||||    
T  13888691 tactccctccgtcctacaatagataacctatttgaaaatgtgcgctattgatttaacatactttgaccgtatt 13888619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 25866103 - 25866135
Alignment:
Q  227 tgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||| |||||||||||||||||||||    
T  25866103 tgcaattttgatctaacttactttgaccatatt 25866135  T

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Target: scaffold0001 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 183966 - 184038
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  183966 tactccctccgtctcgcaataaataacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 184038  T

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Target: scaffold0281 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 13104 - 13176
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||||||  ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||    
T  13104 tactccctccgtcccacaataaatgacctgtttaaaaatttgcaattttgacctagcttactttgaccatatt 13176  T

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Target: scaffold0500 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 739 - 667
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    ||||||||||| || |||||| ||||||  ||||||||| |||||||||||||||||||| ||||||||||||    
T  739 tactccctccgccccgcaatagatgacccatttgaaaatatgcaattttgacctaacttagtttgaccatatt 667  T

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Target: scaffold0204 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 24011 - 23948
Alignment:
Q  189 ctccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttga 252  Q
    |||||||||||| |||||| |||||   ||||||||||||||||||||||||||||||||||||    
T  24011 ctccctccgtcccgcaatagatgacacatttgaaaatgtgcaattttgacctaacttactttga 23948  T

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Target: scaffold0069 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 4441 - 4513
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||| |||||||||||||||||||    ||| |||||||||||||||||||||||||| ||||||| ||||    
T  4441 tactccttccgtcctgcaataaatgattcatttaaaaatgtgcaattttgacctaacttattttgaccgtatt 4513  T

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Target: scaffold0283 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 2996 - 3060
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttga 252  Q
    |||||||||||||| |||||| ||||||  ||| |||||||||||||||||||||  |||||||||    
T  2996 tactccctccgtcc-gcaatagatgacccatttaaaaatgtgcaattttgacctattttactttga 3060  T

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Target: scaffold0289 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 9135 - 9198
Alignment:
Q  187 tactccctccgtcctgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 250  Q
    ||||| |||||| |||| ||| |||| |  ||||||||||||||||||||| ||||||||||||    
T  9135 tactctctccgttctgcgatagatgatccatttgaaaatgtgcaattttgatctaacttacttt 9198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1248 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 1486 - 1448
Alignment:
Q  221 aaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  1486 aaaatgtgtaattttgacataacttactttgaccatatt 1448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 827 - 865
Alignment:
Q  221 aaaatgtgcaattttgacctaacttactttgaccatatt 259  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  827 aaaatgtgtaattttgacataacttactttgaccatatt 865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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