View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18047_high_31 (Length: 230)
Name: NF18047_high_31
Description: NF18047
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18047_high_31 |
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Alignment Details
Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 22306144 - 22306358
Alignment:
| Q |
1 |
gacttgtagaggttggggggtttgaatatggatttgttgggcttgttgtatctgtgtctgggcttggtgggttttgtcctcctgtacttgtgtcaggtgg |
100 |
Q |
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| T |
22306144 |
gacttgtagaggttggggggtttgaatatggatttgttgggcttgttgtgtctgtgtctgggcttggtgggttttgtcctcctgtacttgtgtcaggtgg |
22306243 |
T |
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| Q |
101 |
ttgaggagatgttgggtttatagtaggataaggatttcctcctgttcctggtgttgtagggttcacaataggaattgaatcagattgagtagtactaaat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |
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| T |
22306244 |
ttgaggagatgttgggtttatagtaggataaggatttcctcctgttcctggtgttgtagggttcacaataggaattgaatctgattgagttgtactaaat |
22306343 |
T |
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| Q |
201 |
tcatatgatgaatct |
215 |
Q |
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||||||||||||||| |
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| T |
22306344 |
tcatatgatgaatct |
22306358 |
T |
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