View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18048_high_1 (Length: 362)

Name: NF18048_high_1
Description: NF18048
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18048_high_1
NF18048_high_1
[»] chr7 (47 HSPs)
chr7 (19-362)||(17499341-17499687)
chr7 (19-362)||(17553527-17553873)
chr7 (84-251)||(26492501-26492668)
chr7 (84-248)||(22927647-22927811)
chr7 (84-251)||(2843015-2843182)
chr7 (81-251)||(32521703-32521873)
chr7 (84-249)||(433467-433632)
chr7 (91-248)||(13592287-13592443)
chr7 (84-251)||(26583845-26584013)
chr7 (84-251)||(23085657-23085824)
chr7 (84-250)||(45198808-45198974)
chr7 (91-236)||(7640564-7640709)
chr7 (81-250)||(20083471-20083640)
chr7 (36-251)||(42066836-42067052)
chr7 (36-250)||(32684755-32684970)
chr7 (84-250)||(34773847-34774013)
chr7 (84-241)||(46339190-46339347)
chr7 (84-251)||(1485030-1485198)
chr7 (84-251)||(20116718-20116884)
chr7 (84-251)||(23786711-23786878)
chr7 (83-250)||(35261432-35261599)
chr7 (92-251)||(46822159-46822318)
chr7 (36-251)||(6558964-6559180)
chr7 (94-251)||(21266536-21266695)
chr7 (84-248)||(35667009-35667173)
chr7 (91-250)||(35495950-35496109)
chr7 (91-184)||(17222841-17222934)
chr7 (92-251)||(1448606-1448763)
chr7 (84-169)||(19560134-19560219)
chr7 (84-248)||(42311416-42311578)
chr7 (83-171)||(46818272-46818361)
chr7 (83-168)||(31235641-31235726)
chr7 (84-251)||(23425147-23425314)
chr7 (84-185)||(48208036-48208138)
chr7 (81-250)||(6002162-6002329)
chr7 (84-125)||(14627779-14627820)
chr7 (91-142)||(17611252-17611303)
chr7 (101-171)||(13796803-13796872)
chr7 (115-171)||(25255388-25255444)
chr7 (100-185)||(12141167-12141252)
chr7 (101-171)||(40993305-40993374)
chr7 (101-171)||(45349673-45349742)
chr7 (101-171)||(48316686-48316755)
chr7 (101-177)||(9450005-9450080)
chr7 (115-171)||(39328667-39328723)
chr7 (81-149)||(43369650-43369717)
chr7 (79-151)||(49148009-49148080)
[»] chr4 (50 HSPs)
chr4 (19-362)||(1931415-1931744)
chr4 (36-251)||(9528651-9528867)
chr4 (84-251)||(51318133-51318300)
chr4 (91-251)||(38706484-38706644)
chr4 (36-251)||(10359323-10359537)
chr4 (84-251)||(25274031-25274198)
chr4 (84-251)||(2115362-2115529)
chr4 (37-251)||(9284011-9284226)
chr4 (36-247)||(46990909-46991120)
chr4 (36-251)||(4643957-4644173)
chr4 (84-250)||(53616425-53616591)
chr4 (94-250)||(56199254-56199410)
chr4 (84-251)||(34024212-34024379)
chr4 (84-251)||(43444540-43444707)
chr4 (84-251)||(44947560-44947727)
chr4 (84-251)||(52097690-52097857)
chr4 (84-250)||(9645299-9645465)
chr4 (36-230)||(35964771-35964965)
chr4 (93-250)||(1532065-1532222)
chr4 (36-248)||(45227818-45228031)
chr4 (83-251)||(12265609-12265776)
chr4 (96-251)||(3335938-3336093)
chr4 (84-251)||(20569403-20569572)
chr4 (92-251)||(10389528-10389687)
chr4 (81-168)||(27593686-27593773)
chr4 (84-169)||(43153870-43153955)
chr4 (84-209)||(49410371-49410496)
chr4 (83-236)||(18138706-18138856)
chr4 (83-236)||(49125919-49126069)
chr4 (84-209)||(6972958-6973083)
chr4 (84-247)||(50766290-50766453)
chr4 (84-249)||(868310-868476)
chr4 (84-230)||(37188390-37188536)
chr4 (84-230)||(47417810-47417956)
chr4 (84-209)||(21090290-21090415)
chr4 (84-149)||(32952627-32952692)
chr4 (91-242)||(35261347-35261497)
chr4 (91-149)||(49680692-49680750)
chr4 (136-246)||(29966526-29966636)
chr4 (37-125)||(29965735-29965824)
chr4 (81-125)||(7273714-7273758)
chr4 (101-168)||(32766680-32766746)
chr4 (83-172)||(33921202-33921290)
chr4 (155-192)||(48006629-48006666)
chr4 (115-171)||(2520958-2521014)
chr4 (91-119)||(31381578-31381606)
chr4 (115-171)||(31891161-31891217)
chr4 (100-168)||(36161876-36161943)
chr4 (91-167)||(36184687-36184762)
chr4 (115-171)||(36194887-36194943)
[»] chr5 (45 HSPs)
chr5 (84-248)||(35475115-35475279)
chr5 (84-251)||(4954130-4954297)
chr5 (84-251)||(7247097-7247264)
chr5 (84-251)||(43148865-43149032)
chr5 (94-251)||(7241932-7242089)
chr5 (83-236)||(15571044-15571197)
chr5 (84-251)||(21060057-21060224)
chr5 (84-251)||(27266633-27266800)
chr5 (92-250)||(3271177-3271335)
chr5 (84-251)||(10649782-10649947)
chr5 (91-251)||(34881862-34882022)
chr5 (84-250)||(781526-781692)
chr5 (84-249)||(18677242-18677406)
chr5 (91-251)||(30298989-30299149)
chr5 (84-251)||(27752063-27752230)
chr5 (84-251)||(16981428-16981597)
chr5 (84-250)||(41184216-41184381)
chr5 (83-236)||(20257485-20257638)
chr5 (36-171)||(19259666-19259802)
chr5 (84-251)||(2057608-2057779)
chr5 (102-250)||(43008090-43008238)
chr5 (97-208)||(7612875-7612986)
chr5 (92-187)||(28235731-28235828)
chr5 (94-251)||(7150109-7150266)
chr5 (84-171)||(19280800-19280886)
chr5 (91-171)||(11768144-11768224)
chr5 (36-251)||(30298296-30298514)
chr5 (91-149)||(26578397-26578455)
chr5 (83-149)||(42886615-42886681)
chr5 (36-236)||(42579977-42580178)
chr5 (84-140)||(43261704-43261760)
chr5 (36-111)||(19100552-19100627)
chr5 (92-250)||(13468744-13468901)
chr5 (92-142)||(41418605-41418655)
chr5 (84-251)||(7886714-7886879)
chr5 (113-171)||(8984859-8984917)
chr5 (91-236)||(22978713-22978858)
chr5 (131-185)||(13422107-13422161)
chr5 (101-171)||(34945538-34945607)
chr5 (101-171)||(38597942-38598011)
chr5 (100-185)||(10332407-10332491)
chr5 (92-237)||(11192515-11192659)
chr5 (115-171)||(2979180-2979236)
chr5 (36-64)||(27576312-27576340)
chr5 (100-168)||(41630646-41630713)
[»] chr2 (57 HSPs)
chr2 (83-251)||(9986116-9986284)
chr2 (92-250)||(4228270-4228429)
chr2 (84-251)||(8806006-8806173)
chr2 (84-251)||(8971402-8971569)
chr2 (81-251)||(9374337-9374511)
chr2 (36-251)||(20046856-20047072)
chr2 (84-251)||(27248925-27249092)
chr2 (84-248)||(38575263-38575426)
chr2 (84-251)||(83955-84122)
chr2 (94-251)||(41431178-41431335)
chr2 (84-251)||(4192977-4193144)
chr2 (84-251)||(7015485-7015652)
chr2 (84-251)||(34600354-34600521)
chr2 (36-209)||(27477239-27477413)
chr2 (84-149)||(33229016-33229081)
chr2 (83-250)||(459051-459217)
chr2 (83-208)||(17319459-17319584)
chr2 (36-248)||(27949517-27949730)
chr2 (84-184)||(32678952-32679051)
chr2 (84-251)||(25087177-25087342)
chr2 (92-250)||(21570183-21570341)
chr2 (91-185)||(32913387-32913481)
chr2 (131-248)||(30420856-30420973)
chr2 (92-251)||(2808247-2808405)
chr2 (36-209)||(40659748-40659922)
chr2 (84-251)||(36234148-36234305)
chr2 (81-149)||(37614002-37614070)
chr2 (84-166)||(45128344-45128426)
chr2 (114-251)||(31580429-31580566)
chr2 (84-248)||(40625834-40625998)
chr2 (100-250)||(24461598-24461746)
chr2 (84-144)||(6173772-6173832)
chr2 (84-192)||(41712622-41712730)
chr2 (111-250)||(3268610-3268749)
chr2 (84-251)||(22421868-22422035)
chr2 (36-118)||(39641766-39641848)
chr2 (92-145)||(3725328-3725381)
chr2 (100-185)||(37994439-37994523)
chr2 (136-247)||(13141676-13141787)
chr2 (94-177)||(29279439-29279521)
chr2 (101-251)||(33585527-33585679)
chr2 (155-248)||(28037296-28037389)
chr2 (113-250)||(39641081-39641218)
chr2 (101-185)||(7646634-7646717)
chr2 (115-171)||(10237091-10237147)
chr2 (101-251)||(18763624-18763776)
chr2 (101-168)||(36692030-36692096)
chr2 (101-167)||(1421832-1421897)
chr2 (101-171)||(12554056-12554125)
chr2 (115-177)||(35220497-35220559)
chr2 (81-209)||(36323990-36324119)
chr2 (111-164)||(3269814-3269867)
chr2 (100-169)||(4904022-4904090)
chr2 (128-185)||(8809461-8809518)
chr2 (128-185)||(33923887-33923944)
chr2 (101-185)||(11985094-11985177)
chr2 (115-195)||(19028765-19028845)
[»] chr8 (45 HSPs)
chr8 (84-251)||(4809107-4809274)
chr8 (84-251)||(14906697-14906864)
chr8 (84-251)||(29777362-29777529)
chr8 (84-250)||(44578173-44578339)
chr8 (94-250)||(23851269-23851425)
chr8 (84-251)||(9498373-9498540)
chr8 (36-251)||(27746889-27747103)
chr8 (81-236)||(33342574-33342728)
chr8 (93-251)||(44099710-44099868)
chr8 (81-186)||(33298994-33299099)
chr8 (83-250)||(39152917-39153085)
chr8 (95-242)||(11267162-11267309)
chr8 (104-251)||(33896249-33896396)
chr8 (84-251)||(34611947-34612114)
chr8 (36-178)||(42447874-42448017)
chr8 (84-250)||(9619132-9619298)
chr8 (84-248)||(32724258-32724422)
chr8 (91-242)||(11725830-11725981)
chr8 (84-251)||(37565653-37565820)
chr8 (84-234)||(2656013-2656163)
chr8 (84-250)||(43889899-43890065)
chr8 (94-251)||(9072871-9073028)
chr8 (84-209)||(11464314-11464439)
chr8 (98-247)||(16794448-16794597)
chr8 (94-185)||(15047045-15047136)
chr8 (83-250)||(28239983-28240150)
chr8 (91-185)||(43135419-43135513)
chr8 (92-209)||(43192163-43192280)
chr8 (92-250)||(11197034-11197187)
chr8 (84-146)||(35580599-35580661)
chr8 (100-194)||(45445660-45445753)
chr8 (91-148)||(15597045-15597102)
chr8 (100-192)||(27110316-27110407)
chr8 (101-171)||(23230791-23230860)
chr8 (84-125)||(19876353-19876394)
chr8 (83-171)||(31013480-31013567)
chr8 (115-171)||(41896678-41896734)
chr8 (100-171)||(18890571-18890641)
chr8 (204-251)||(27498155-27498202)
chr8 (115-185)||(15344469-15344539)
chr8 (115-185)||(15433534-15433604)
chr8 (115-185)||(15524838-15524908)
chr8 (115-193)||(37971444-37971522)
chr8 (91-142)||(17949385-17949434)
chr8 (115-171)||(30568193-30568249)
[»] chr3 (41 HSPs)
chr3 (84-251)||(25162569-25162736)
chr3 (84-251)||(25631300-25631467)
chr3 (84-251)||(36906255-36906422)
chr3 (84-250)||(29503594-29503760)
chr3 (84-251)||(12116231-12116398)
chr3 (79-250)||(44907174-44907345)
chr3 (36-250)||(46178653-46178867)
chr3 (84-250)||(46934775-46934938)
chr3 (84-250)||(3848694-3848860)
chr3 (92-250)||(32607610-32607768)
chr3 (36-251)||(17237889-17238105)
chr3 (94-250)||(30648494-30648650)
chr3 (84-242)||(49552007-49552165)
chr3 (40-149)||(36734569-36734678)
chr3 (84-185)||(39917238-39917339)
chr3 (83-251)||(22803162-22803330)
chr3 (84-180)||(25849942-25850038)
chr3 (92-251)||(35498974-35499131)
chr3 (84-251)||(4178698-4178865)
chr3 (84-251)||(38854813-38854977)
chr3 (84-149)||(42719650-42719715)
chr3 (86-206)||(14464645-14464765)
chr3 (83-234)||(37169361-37169512)
chr3 (36-149)||(31794155-31794267)
chr3 (36-251)||(21488175-21488393)
chr3 (91-250)||(50611193-50611352)
chr3 (91-209)||(21916613-21916731)
chr3 (119-248)||(38440368-38440497)
chr3 (91-135)||(51202144-51202188)
chr3 (84-125)||(2342596-2342637)
chr3 (113-185)||(50194195-50194267)
chr3 (115-250)||(35175562-35175699)
chr3 (100-169)||(12946843-12946911)
chr3 (101-249)||(48650527-48650677)
chr3 (96-171)||(4821946-4822020)
chr3 (101-171)||(33580025-33580094)
chr3 (101-171)||(38859986-38860055)
chr3 (101-171)||(40487470-40487539)
chr3 (115-172)||(51923885-51923942)
chr3 (83-115)||(6910622-6910654)
chr3 (115-171)||(51303517-51303573)
[»] chr6 (38 HSPs)
chr6 (93-251)||(25064381-25064539)
chr6 (84-251)||(17237060-17237227)
chr6 (84-247)||(17334889-17335052)
chr6 (36-250)||(35001677-35001892)
chr6 (84-250)||(12059548-12059714)
chr6 (36-251)||(4984341-4984557)
chr6 (84-251)||(8027892-8028059)
chr6 (84-251)||(16419294-16419461)
chr6 (91-248)||(33740355-33740512)
chr6 (84-239)||(8196193-8196348)
chr6 (84-248)||(7880879-7881043)
chr6 (84-251)||(8497103-8497271)
chr6 (36-251)||(12653031-12653247)
chr6 (84-207)||(33110747-33110870)
chr6 (91-251)||(23947091-23947252)
chr6 (84-250)||(4088596-4088762)
chr6 (91-251)||(28634887-28635047)
chr6 (83-236)||(25337700-25337853)
chr6 (92-248)||(7875821-7875977)
chr6 (84-207)||(10228815-10228938)
chr6 (84-250)||(16892595-16892757)
chr6 (36-249)||(4468645-4468853)
chr6 (84-145)||(7027999-7028060)
chr6 (83-149)||(34489356-34489421)
chr6 (84-144)||(20619603-20619663)
chr6 (112-250)||(12168840-12168980)
chr6 (83-149)||(4351882-4351947)
chr6 (101-171)||(9341525-9341594)
chr6 (115-184)||(7976048-7976117)
chr6 (94-149)||(8518993-8519049)
chr6 (102-184)||(20225999-20226080)
chr6 (102-184)||(22119983-22120064)
chr6 (83-177)||(33053036-33053129)
chr6 (84-117)||(12165975-12166008)
chr6 (100-192)||(9380169-9380260)
chr6 (101-185)||(29319737-29319821)
chr6 (115-171)||(30493692-30493748)
chr6 (96-168)||(33543481-33543553)
[»] chr1 (62 HSPs)
chr1 (36-251)||(50271914-50272130)
chr1 (84-251)||(9686979-9687146)
chr1 (84-251)||(25406058-25406225)
chr1 (36-251)||(51868419-51868635)
chr1 (84-251)||(50148510-50148677)
chr1 (94-251)||(50165873-50166030)
chr1 (84-248)||(11709484-11709648)
chr1 (84-248)||(45805606-45805769)
chr1 (103-251)||(48217596-48217744)
chr1 (84-251)||(51872003-51872170)
chr1 (91-251)||(41081478-41081638)
chr1 (84-251)||(33291192-33291359)
chr1 (84-250)||(7342862-7343028)
chr1 (84-250)||(32676910-32677071)
chr1 (37-209)||(5701351-5701524)
chr1 (94-251)||(19723463-19723620)
chr1 (40-251)||(19715669-19715881)
chr1 (91-251)||(11454082-11454244)
chr1 (92-251)||(30879223-30879382)
chr1 (84-251)||(27914881-27915045)
chr1 (91-251)||(5324333-5324492)
chr1 (84-251)||(9172630-9172797)
chr1 (84-251)||(9180612-9180779)
chr1 (81-184)||(39927396-39927499)
chr1 (84-249)||(28035279-28035441)
chr1 (86-236)||(31130382-31130532)
chr1 (86-251)||(20266444-20266609)
chr1 (84-185)||(38520375-38520476)
chr1 (83-171)||(18569165-18569253)
chr1 (91-171)||(40880867-40880947)
chr1 (84-251)||(33816942-33817109)
chr1 (84-251)||(33876412-33876579)
chr1 (84-251)||(34519268-34519435)
chr1 (84-160)||(30818216-30818292)
chr1 (99-251)||(31836989-31837141)
chr1 (84-251)||(9919529-9919693)
chr1 (84-195)||(27872877-27872988)
chr1 (91-169)||(3871555-3871633)
chr1 (91-185)||(45425906-45426000)
chr1 (84-185)||(7997929-7998030)
chr1 (91-242)||(40646821-40646971)
chr1 (36-149)||(14545608-14545722)
chr1 (94-172)||(48365619-48365697)
chr1 (84-250)||(35584398-35584559)
chr1 (81-149)||(7311982-7312050)
chr1 (36-149)||(39987480-39987592)
chr1 (83-242)||(5856040-5856198)
chr1 (98-250)||(44637567-44637723)
chr1 (100-171)||(47133051-47133121)
chr1 (128-194)||(27456659-27456725)
chr1 (81-194)||(13144663-13144775)
chr1 (115-184)||(19061071-19061140)
chr1 (101-177)||(5983985-5984060)
chr1 (100-171)||(32679015-32679085)
chr1 (92-171)||(32873738-32873816)
chr1 (115-177)||(48750347-48750409)
chr1 (101-190)||(14872788-14872876)
chr1 (115-192)||(24583308-24583385)
chr1 (154-250)||(18649756-18649852)
chr1 (101-185)||(31919138-31919221)
chr1 (101-185)||(34878138-34878221)
chr1 (115-171)||(36775584-36775640)
[»] scaffold0311 (1 HSPs)
scaffold0311 (91-242)||(8834-8985)
[»] scaffold0014 (1 HSPs)
scaffold0014 (36-250)||(201148-201363)
[»] scaffold0146 (1 HSPs)
scaffold0146 (36-251)||(16094-16310)
[»] scaffold0022 (1 HSPs)
scaffold0022 (86-250)||(83212-83377)
[»] scaffold0003 (1 HSPs)
scaffold0003 (87-250)||(361574-361737)
[»] scaffold0426 (1 HSPs)
scaffold0426 (36-171)||(6392-6528)
[»] scaffold0495 (1 HSPs)
scaffold0495 (84-207)||(5534-5657)
[»] scaffold0136 (1 HSPs)
scaffold0136 (81-171)||(34636-34725)
[»] scaffold0888 (1 HSPs)
scaffold0888 (100-171)||(1552-1622)
[»] scaffold0009 (1 HSPs)
scaffold0009 (100-171)||(57962-58032)
[»] scaffold0127 (1 HSPs)
scaffold0127 (101-171)||(15638-15707)


Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 19 - 362
Target Start/End: Complemental strand, 17499687 - 17499341
Alignment:
Q  19 gttgcggtgttcatttgattcaatcaaagatttgggcatcaacgtttgagatctatagatacgagtattccagtcactttaattttatcatatatttttg 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17499687 gttgcggtattcatttgattcaatcaaagatttgggcatcaacgttggagatctatagatacgagtattccagtcactttaattttatcatatatttttg 17499588  T
Q  119 taggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttca-tcttttacatctttaacagtggtgaatgatgttctctatt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||    
T  17499587 taggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcacagttttacatctttaagagtggtgaatgatgttctctatt 17499488  T
Q  218 gatttgaacgaatgaatattattttatttttgtcnnnnnnnntaataataacgtgttcatgattccactaataaaaggaatatgtgtgaccataata--n 315  Q
    ||||||||||||||||||| |||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  17499487 gatttgaacgaatgaatatcattttatttttgtaaacaaaaaaaataataacgtgttcatgattccactaataaaaggaatatgtgtgaccataatattt 17499388  T
Q  316 nnnnnnncaaaatctacttgcatgcgatggatttaactatagtcacc 362  Q
           ||||| | |||||||||||||||||||||||||| |||||    
T  17499387 tttttttcaaaaaccacttgcatgcgatggatttaactatattcacc 17499341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 19 - 362
Target Start/End: Original strand, 17553527 - 17553873
Alignment:
Q  19 gttgcggtgttcatttgattcaatcaaagatttgggcatcaacgtttgagatctatagatacgagtattccagtcactttaattttatcatatatttttg 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17553527 gttgcggtattcatttgattcaatcaaagatttgggcatcaacgttggagatctatagatacgagtattccagtcactttaattttatcatatatttttg 17553626  T
Q  119 taggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttca-tcttttacatctttaacagtggtgaatgatgttctctatt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||||||||    
T  17553627 taggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcacagttttacatctttaagagtggtgaatgatgttctctatt 17553726  T
Q  218 gatttgaacgaatgaatattattttatttttgtcnnnnnnnntaataataacgtgttcatgattccactaataaaaggaatatgtgtgaccataata--n 315  Q
    ||||||||||||||||||| |||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  17553727 gatttgaacgaatgaatatcattttatttttgtaaacaaaaaaaataataacgtgttcatgattccactaataaaaggaatatgtgtgaccataatattt 17553826  T
Q  316 nnnnnnncaaaatctacttgcatgcgatggatttaactatagtcacc 362  Q
           ||||| | |||||||||||||||||||||||||| |||||    
T  17553827 tttttttcaaaaaccacttgcatgcgatggatttaactatattcacc 17553873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 26492501 - 26492668
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| | || ||||| ||||||| ||  ||||||||||    
T  26492501 tattccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctattaacttggatgctgtgagtttgttcacagattcatctttt 26492600  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| ||||||||    
T  26492601 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 26492668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 84 - 248
Target Start/End: Complemental strand, 22927811 - 22927647
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| || |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| |||| ||||| ||||||||||  |||||| |||    
T  22927811 tattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctatcaacttggttgctgtgagtttgttcgcaaattcatccttt 22927712  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttattttt 248  Q
    |||| |||| | ||| ||||||||||  ||| | ||||||||  ||||||||| |||||||||||    
T  22927711 acatttttagcggtgttgaatgatgtaatctctcgatttgaattaatgaatatcattttattttt 22927647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 2843182 - 2843015
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||| | || ||||| ||||||| ||| |||||| |||    
T  2843182 tattccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattagcttagatgctgtgagtttgttcacatattcatccttt 2843083  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  ||| |  ||||||| |||||||||| ||||||||||||||    
T  2843082 acgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatatcattttatttttgtc 2843015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 32521873 - 32521703
Alignment:
Q  81 gagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatct 180  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| ||| ||||||||| ||||||||| | |||||||| ||||||| ||  ||||||     
T  32521873 gagtattccagacacttttattttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgttgtgagtttgttcacaaattcatcc 32521774  T
Q  181 tttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    |||||   |||||| ||| ||||||||||  || || |||||||| ||||||||||  |||||||||||||    
T  32521773 tttacgattttaacggtgttgaatgatgtaatccatcgatttgaatgaatgaatatcgttttatttttgtc 32521703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 84 - 249
Target Start/End: Complemental strand, 433632 - 433467
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| || |||||||||||||||||||||||||||||||| |||  |||||||||||||||||| | |||||||| ||||||||||  |||||| |||    
T  433632 tattccggtgactttaattttatcatatatttttgtaggcattatgctgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttt 433533  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttg 249  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| ||||||||||  |||||||||||    
T  433532 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatctttttatttttg 433467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 91 - 248
Target Start/End: Complemental strand, 13592443 - 13592287
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctt 190  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | || ||||| ||||||||||  |||||| ||||||| ||    
T  13592443 gtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttcgatgctgtgagtttgttcgcagattcatcctttacatttt 13592344  T
Q  191 taacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttattttt 248  Q
    || ||||| ||||| |||| |||||| ||||| || ||||| || | ||||| |||||    
T  13592343 tagcagtgttgaat-atgtactctatcgattttaatgaatggatctcattttgttttt 13592287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 26583845 - 26584013
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttg-ttgttgtgaatttgttcgcatcttcatcttt 182  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  || |||||  || ||||||  |||||| ||    
T  26583845 tattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaactttgaatgctgtgagcttattcgcagattcatcctt 26583944  T
Q  183 tacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    ||| | ||||||  || ||||||||||  |||   |||||||| |||||||||| ||||||||||||||    
T  26583945 tacgtttttaacgatgttgaatgatgtaatctcacgatttgaatgaatgaatatcattttatttttgtc 26584013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 23085657 - 23085824
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||| || | |  ||||| ||||||||||  |||||| |||    
T  23085657 tattccggtgactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaatttggatactgtgagtttgttcgcagattcatccttt 23085756  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| |||| ||||| ||||||||||||||    
T  23085757 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatcaatataattttatttttgtc 23085824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 84 - 250
Target Start/End: Complemental strand, 45198974 - 45198808
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| |||||||| ||||||||||||||||||||||| || |||||||||||| |||||||||| | |||||||| | ||||||||  |||||| |||    
T  45198974 tattccggtcactttgattttatcatatatttttgtaggtattatgtcgttatatactattaacttggatgttgtgagtatgttcgcagattcatccttt 45198875  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| |||||||    
T  45198874 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 45198808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 91 - 236
Target Start/End: Complemental strand, 7640709 - 7640564
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctt 190  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | |||||||| ||||||||||  |||||| ||||| | ||    
T  7640709 gtcactttaatttcatcatatatttttataggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcatttacgtttt 7640610  T
Q  191 taacagtggtgaatgatgttctctattgatttgaacgaatgaatat 236  Q
    || | ||| ||||||||||  ||| | |||||||| ||||||||||    
T  7640609 tagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 7640564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 81 - 250
Target Start/End: Original strand, 20083471 - 20083640
Alignment:
Q  81 gagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatct 180  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||| | | ||||||||||  ||||||     
T  20083471 gagtattccggtcactttagttttatcatatatttttgtaggcattatgtcgttatacgctattaactttgatgttattagtttgttcgcagattcatca 20083570  T
Q  181 tttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    ||||||| | || |  || | |||||||| || ||| |||||||| |||| ||||| ||||| |||||||    
T  20083571 tttacatttgtagcgatgttaaatgatgtactatatcgatttgaatgaataaatatcattttgtttttgt 20083640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 36 - 251
Target Start/End: Complemental strand, 42067052 - 42066836
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctata-gatacgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||||| ||||||||  |||||   | |  | || |||||| ||||||||||||||||||||||||||||||||||||| | || |    
T  42067052 attcaatcaaagatttgggcgtcaacgttgcagatccggaagccatgaatattccggtcactttaattttatcatatatttttgtaggcataacgccgat 42066953  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaat 234  Q
    || |||||||||||| | |||||||| | ||||||||| || ||  ||||| | |||| | ||| ||||||||||  ||| | |||||||| ||||||||    
T  42066952 atgtgctattaacttggatgttgtgagtatgttcgcatatttattctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaat 42066853  T
Q  235 attattttatttttgtc 251  Q
    || ||||| ||||||||    
T  42066852 atcattttgtttttgtc 42066836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 36 - 250
Target Start/End: Original strand, 32684755 - 32684970
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||||| ||||||||  ||||||  ||   | |  |||||| ||||||||| ||||||||||||||||||||||||| ||| ||||    
T  32684755 attcaatcaaagatttgggcgtcaacgttacagatctggaggccatggatattccggtcactttagttttatcatatatttttgtaggcattatgccgtt 32684854  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaat 234  Q
    ||||||||||||||| | || ||| | |||||||| |  |||||| ||||| | |||| | ||| ||||||||||  ||| | |||||||| ||||||||    
T  32684855 atatgctattaacttggatgctgtaagtttgttcgtagattcatcctttacgtttttagcggtgttgaatgatgtagtctctcgatttgaatgaatgaat 32684954  T
Q  235 attattttatttttgt 250  Q
    || ||||| |||||||    
T  32684955 atcattttgtttttgt 32684970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 84 - 250
Target Start/End: Original strand, 34773847 - 34774013
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||||||||||||||||| ||||||||||||||||||||| || ||||||||| |||||||||| | || ||||| |||||| |||  || ||| |||    
T  34773847 tattccagtcactttaatttcatcatatatttttgtaggcattatatcgttatatactattaacttggatgctgtgagtttgtttgcagatttatccttt 34773946  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| |||||||    
T  34773947 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 34774013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 84 - 241
Target Start/End: Original strand, 46339190 - 46339347
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||| |||||||||||||| | |||| ||||||||||||| ||||||||| | || ||||| ||||||| ||  |||||| |||    
T  46339190 tattccggtcactttaatttcatcatatatttttgcatgcattatgtcgttatatgttattaacttggatgatgtgagtttgttcacagattcatccttt 46339289  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattt 241  Q
    || | |||||||||| ||||||||||  ||| |||||||||| ||| |||||| ||||    
T  46339290 acgtttttaacagtgttgaatgatgtaatctcttgatttgaatgaaagaatatcattt 46339347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 1485198 - 1485030
Alignment:
Q  84 tattccagtcactttaattttat-catatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttt 182  Q
    |||||| || ||||||||||| | ||||||||||||||||||| ||| | ||||||||||||||||| | |||||| || |||||||||  |||||| ||    
T  1485198 tattccggtgactttaatttttttcatatatttttgtaggcattatgcccttatatgctattaacttggatgttgtaaacttgttcgcagattcatcctt 1485099  T
Q  183 tacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    ||| | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||||||||||||    
T  1485098 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtc 1485030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 20116718 - 20116884
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| |||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||| | |||||||| ||||||| ||  |||||| |||    
T  20116718 tattccggtcactttaattttatcaaatatttttgtaggcattatgtcg-tatatgctattaacttggatgttgtgagtttgttcacagattcatcattt 20116816  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | |||  |||||||||  ||| | |||||||| |||||||||| |||||  |||||||    
T  20116817 acgtttttagcggtgtggaatgatgtaatctctcgatttgaatgaatgaatatcattttggttttgtc 20116884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 23786711 - 23786878
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| |||||||||||||||||||||||||||||| |||| |||| |||||||||||| ||||| | || ||||| ||||||||||  |||||| |||    
T  23786711 tattcctgtcactttaattttatcatatatttttgtatgcattatgttgttatatgctatcaacttagatgctgtgagtttgttcgcagattcatcattt 23786810  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  ||| |  | ||||| ||||||||||  |||||||||||||    
T  23786811 acgtttttagctgtgttgaatgatgtaatctctctaattgaatgaatgaatatatttttatttttgtc 23786878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 83 - 250
Target Start/End: Original strand, 35261432 - 35261599
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttt 182  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||| | | |||||| ||||||||||  |||||| ||    
T  35261432 gtattccggtcactttaattttatcatatatttttgtaggcattatgccgttgtatgctattaacttggatattgtgagtttgttcgcagattcatcctt 35261531  T
Q  183 tacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    ||  | ||||   ||| | |||||||| ||||||  ||||||| |||||||||| ||| | |||||||    
T  35261532 tatgtttttagtggtgttaaatgatgtactctatcaatttgaatgaatgaatatcattctgtttttgt 35261599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 92 - 251
Target Start/End: Original strand, 46822159 - 46822318
Alignment:
Q  92 tcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttt 191  Q
    |||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| | || ||||| ||||||||||  |||||| ||||| | |||    
T  46822159 tcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgttttt 46822258  T
Q  192 aacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    |   ||| ||||||||||  ||| | |||||||| |||| ||||| ||||| ||||||||    
T  46822259 agtggtgttgaatgatgtaatctctcgatttgaatgaattaatatcattttgtttttgtc 46822318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 36 - 251
Target Start/End: Original strand, 6558964 - 6559180
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||||| ||||||||  |||||   ||   | || |||||| |||||||||||||||||||||||||||| | |||| ||||||||    
T  6558964 attcaatcaaagatttgggcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgcaagcattatgtcgtt 6559063  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaat 234  Q
    ||||||||||||||| | || | ||| ||||||| ||| |||||| ||||| | ||||  |||| |||||||| |  ||| |  |||| || ||||||||    
T  6559064 atatgctattaacttggatgctatgagtttgttcacatattcatcatttacgtttttagtagtgttgaatgatataatctctcaatttaaatgaatgaat 6559163  T
Q  235 attattttatttttgtc 251  Q
    || ||||| ||||||||    
T  6559164 atcattttgtttttgtc 6559180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 94 - 251
Target Start/End: Original strand, 21266536 - 21266695
Alignment:
Q  94 actttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaa 193  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| | || ||||| ||||||| ||  |||||| ||||| | ||||     
T  21266536 actttagttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcacagattcatcatttacgtttttag 21266635  T
Q  194 cagtggtgaatgatgt--tctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    | ||| |||||| |||  ||||| | |||||||| |||||||||| ||||| ||||||||    
T  21266636 cggtgttgaatggtgtaatctctctcgatttgaatgaatgaatatcattttgtttttgtc 21266695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 84 - 248
Target Start/End: Complemental strand, 35667173 - 35667009
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| |||||||||||||||||||||||||||||| |||| |||| |||||||| ||||||||| | ||| |||| ||||||| ||  |||||| |||    
T  35667173 tattccggtcactttaattttatcatatatttttgtatgcattatgttgttatatgatattaacttggatgtcgtgagtttgttcacaaattcatcattt 35667074  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttattttt 248  Q
    || | |||| | ||| |||||| | |  ||| |||||||||| |||||||||| ||||| |||||    
T  35667073 acgtttttagcggtgttgaatggtatattctcttgatttgaatgaatgaatatcattttgttttt 35667009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 91 - 250
Target Start/End: Complemental strand, 35496109 - 35495950
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctt 190  Q
    ||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| | || ||||| |||||||| |  ||||||  |||| | ||    
T  35496109 gtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgtagattcatcccttacgtttt 35496010  T
Q  191 taacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    || | ||| ||||||||||  ||| | |||||||| || ||||||| ||||| |||||||    
T  35496009 tagcggtgttgaatgatgtaatctctcgatttgaatgattgaatatcattttgtttttgt 35495950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 184
Target Start/End: Complemental strand, 17222934 - 17222841
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttta 184  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||| | |||||||| ||||||||||  |||||| ||||    
T  17222934 gtcactttaattttatcatatatttttgtaggcattatgccgttatatgctagtaacttggatgttgtgagtttgttcgcagattcatccttta 17222841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 92 - 251
Target Start/End: Complemental strand, 1448763 - 1448606
Alignment:
Q  92 tcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttt 191  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||  ||||||||||  |||||| ||||  | ||     
T  1448763 tcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtg--tttgttcgcagattcatcctttaggttttc 1448666  T
Q  192 aacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    | | ||| |||||||| |  | | | |||||||| |||||||||| ||||| ||||||||    
T  1448665 agcggtgttgaatgatataatatctcgatttgaatgaatgaatatcattttgtttttgtc 1448606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 19560134 - 19560219
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcg 169  Q
    |||||| ||||||||||||||||||||||||||||||  ||| ||| |||||||||||||||||||  ||| ||||||||||||||    
T  19560134 tattccggtcactttaattttatcatatatttttgtacacattatgccgttatatgctattaacttgattgatgtgaatttgttcg 19560219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 84 - 248
Target Start/End: Original strand, 42311416 - 42311578
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| |||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||| | ||   ||| ||||||||||  |||||| |||    
T  42311416 tattccggtcactttaattttatcatatatttttgtacgcattatgccgttatatgctattaacttggatg--ctgagtttgttcgcaaattcatccttt 42311513  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttattttt 248  Q
    || | | || ||||| ||||| ||||  ||| | ||||||||  ||||||||| ||||| |||||    
T  42311514 acgtttctagcagtgttgaataatgtaatctctcgatttgaataaatgaatatcattttgttttt 42311578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 83 - 171
Target Start/End: Complemental strand, 46818361 - 46818272
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtagg-cataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||||||  ||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||| | |||||||| ||||||||||    
T  46818361 gtattccgttcactttaattttatcatatatttttgtacgacattatgtcgttatatgctattaacttggatgttgtgagtttgttcgca 46818272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 31235726 - 31235641
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttc 168  Q
    |||||||  |||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||| | || ||||| |||||||    
T  31235726 gtattccgatcactttaattttatcatgtatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttc 31235641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 23425314 - 23425147
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    ||||| |||||||||| ||||||||||||||||||||||||| ||| ||||||||| ||||||||| | || ||| | | |||||  |  |||||| |||    
T  23425314 tattctagtcactttacttttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgctgttagtatgttcatagattcatcattt 23425215  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| |  || ||||| ||||  ||| || ||||||| |||||||||| ||||| ||||||||    
T  23425214 acgtttttagcgatgttgaataatgtaatctcttaatttgaatgaatgaatatcattttgtttttgtc 23425147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 84 - 185
Target Start/End: Original strand, 48208036 - 48208138
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgcta-ttaactttgttgttgtgaatttgttcgcatcttcatcttt 182  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||| |||||||||||| ||||||| | |||||||| | | ||||||  |||||| ||    
T  48208036 tattccggtcactttaattttatcatatatttttgttggcattatgccgttatatgctatttaacttggatgttgtgagtattttcgcagattcatcctt 48208135  T
Q  183 tac 185  Q
    |||    
T  48208136 tac 48208138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 250
Target Start/End: Original strand, 6002162 - 6002329
Alignment:
Q  81 gagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatct 180  Q
    ||||||||| ||||| ||||||||||||| ||||||||||||||| ||| | |  |||||||||||||| | || ||||| ||| ||| ||  || |||     
T  6002162 gagtattccggtcaccttaattttatcatgtatttttgtaggcattatgccat--tatgctattaacttggatgatgtgagtttattcacagatttatca 6002259  T
Q  181 tttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    ||||| | ||||||  || ||||| ||||   |||| |||||||| |||||||||||| ||| |||||||    
T  6002260 tttacgtttttaacgatgttgaataatgtaacctatcgatttgaatgaatgaatattagtttgtttttgt 6002329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 14627820 - 14627779
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcat 125  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14627820 tattccagtcactttaattttatcatatatttttgtaggcat 14627779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 17611252 - 17611303
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgcta 142  Q
    |||| |||||||||||||||||||||||||||||| || ||| |||||||||    
T  17611252 gtcattttaattttatcatatatttttgtaggcattatatcgctatatgcta 17611303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 13796872 - 13796803
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    ||||||||||| | |||||||||||  ||||||| |||||||||||||| | |||||||| ||||||||||    
T  13796872 ttttatcatat-tatttgtaggcattttgtcgttgtatgctattaacttggatgttgtgagtttgttcgca 13796803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 25255388 - 25255444
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||||||||||  ||||||| |||||||||||||| | |||||||| ||||||||||    
T  25255388 tttgtaggcattttgtcgttgtatgctattaacttagatgttgtgagtttgttcgca 25255444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 185
Target Start/End: Complemental strand, 12141252 - 12141167
Alignment:
Q  100 attttatcatatatttttgtaggcataatgtcgttatatgctattaactttg-ttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    |||||||||||| | |||||| ||||  || |||| |||||||||||||| | ||||||||| ||||||||||| |||| |||||||    
T  12141252 attttatcatat-tatttgtatgcattttgccgttgtatgctattaacttgggttgttgtgagtttgttcgcatattcaccttttac 12141167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 40993305 - 40993374
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    ||||||||||| | |||||||||||  ||||||| |||| ||||||||| | |||||||| ||||||||||    
T  40993305 ttttatcatat-tatttgtaggcattttgtcgttgtatgttattaacttgggtgttgtgagtttgttcgca 40993374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 45349742 - 45349673
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    ||||||||||| | |||||||||||  || |||| |||||||||||||| | |||||||| ||||||||||    
T  45349742 ttttatcatat-tatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcgca 45349673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 48316755 - 48316686
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    ||||||||||| | |||||||||||  ||||||| |||||||||||||| | || ||||| ||||||||||    
T  48316755 ttttatcatat-tatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgca 48316686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 9450080 - 9450005
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttca 177  Q
    ||||||||||| | |||||||||||  || |||| ||||||||||| || | |||||||| ||||||||||| ||||    
T  9450080 ttttatcatat-tatttgtaggcattttgccgttgtatgctattaatttaggtgttgtgagtttgttcgcatattca 9450005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 39328723 - 39328667
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||||||||||  || |||| |||||||||||||| | || ||||||||||||||||    
T  39328723 tttgtaggcattttgccgttttatgctattaacttgggtgctgtgaatttgttcgca 39328667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 43369717 - 43369650
Alignment:
Q  81 gagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactt 149  Q
    |||||||| |||||||||||||||||||||| | ||| |||||||  || |||| |||| |||||||||    
T  43369717 gagtattctagtcactttaattttatcatat-tatttataggcattttgccgttgtatgatattaactt 43369650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 49148080 - 49148009
Alignment:
Q  79 acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttg 151  Q
    |||||||||||||| ||||  |||||||||||| |  |||| |||||  ||||||| ||||||||||||||||    
T  49148080 acgagtattccagtgacttggattttatcatat-taattgttggcattttgtcgttgtatgctattaactttg 49148009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 19 - 362
Target Start/End: Complemental strand, 1931744 - 1931415
Alignment:
Q  19 gttgcggtgttcatttgattcaatcaaagatttgggcatcaacgtttgagatctatagatacgagtattccagtcactttaattttatcatatatttttg 118  Q
    |||||||||||||||||||||||||||||||||||             |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1931744 gttgcggtgttcatttgattcaatcaaagatttgg-------------agatctgtagatacgagtattccagtcactttaattttatcatatatttttg 1931658  T
Q  119 taggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattg 218  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1931657 taggcataatgtcgttatatgctattaactttgttgctgtgaatttgttcgcttcttcatcttttacatctttaacagtggtgaatgatgttctctattg 1931558  T
Q  219 atttgaacgaatgaatattattttatttttgtcnnnnnnnntaata-ataacgtgttcatgattccactaataaaaggaatatgtgtgaccataatannn 317  Q
    |||||||||||||||||| |||||||||||||          || | |||||||||| ||||||||||||||| ||| |||||||||||||||||||       
T  1931557 atttgaacgaatgaatatcattttatttttgt--aaaaaaaaaacacataacgtgtttatgattccactaatagaagaaatatgtgtgaccataatattt 1931460  T
Q  318 nnnnncaaaatctacttgcatgcgatggatttaactatagtcacc 362  Q
         ||||| | |||||||||||||||||||||||||| |||||    
T  1931459 attttcaaaaaccacttgcatgcgatggatttaactatattcacc 1931415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 36 - 251
Target Start/End: Complemental strand, 9528867 - 9528651
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||| | ||||||||  ||||||  || | | |  |||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  9528867 attcaatcaaagatttggccgtcaacgttgcagatctggaggtcatggatattccggtcactttaattttatcatatatttttgtaggcattatgtcgtt 9528768  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaat 234  Q
    |||||||||||||||   |||||||| ||||||||||  |||||| ||||| | |||| | ||| ||||||||||  ||| | |||||||| ||||||||    
T  9528767 atatgctattaacttgaatgttgtgagtttgttcgcagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaat 9528668  T
Q  235 attattttatttttgtc 251  Q
    || ||||| ||||||||    
T  9528667 atcattttgtttttgtc 9528651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 51318133 - 51318300
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | || ||||| ||||||| ||  |||||| |||    
T  51318133 tattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcacagattcatccttt 51318232  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| ||||| ||||||||||  ||| | ||||| || |||||||||| ||||||||||||||    
T  51318233 acgtttttagcagtgttgaatgatgtaatctctcgatttaaatgaatgaatatcattttatttttgtc 51318300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 91 - 251
Target Start/End: Complemental strand, 38706644 - 38706484
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctt 190  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| | || ||||| ||||||||||  |||||||||||| | ||    
T  38706644 gtcactttaattttatcatatatttttgtagacattatgtcgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcttttacgtttt 38706545  T
Q  191 taacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| ||||||||    
T  38706544 tagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatgattttgtttttgtc 38706484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 36 - 251
Target Start/End: Complemental strand, 10359537 - 10359323
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagatacgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtta 135  Q
    ||||||| |||||||||||||||||||||  ||||||  ||  | |  |||||||||||||||| ||||||||||||||||||||||||| ||| |||||    
T  10359537 attcaataaaagatttgggcatcaacgttgcagatcttgaggcatggatattccagtcactttatttttatcatatatttttgtaggcattatgccgtta 10359438  T
Q  136 tatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaata 235  Q
    |||||||||||||| | || ||||| ||||||||||  |||||| ||||| | |||| | ||| ||||||||||  ||| | |||||| | |||||||||    
T  10359437 tatgctattaacttggatgatgtgagtttgttcgcaaattcatc-tttacgtttttagcggtgttgaatgatgtaatctctcgatttggatgaatgaata 10359339  T
Q  236 ttattttatttttgtc 251  Q
    | ||||| ||||||||    
T  10359338 tcattttgtttttgtc 10359323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 25274031 - 25274198
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||| | |||||||| ||||||||||  |||||| |||    
T  25274031 tattccggtcactttaattttatcatatatttttgtaggcattatgctgttatatgctattaacttagatgttgtgagtttgttcgcagattcatccttt 25274130  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| ||||||||    
T  25274131 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 25274198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 2115529 - 2115362
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| | |  ||||| ||||||||||  |||||| |||    
T  2115529 tattccagtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaacttggatactgtgagtttgttcgcagattcatccttt 2115430  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    |  | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| ||||||||    
T  2115429 atgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 2115362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 37 - 251
Target Start/End: Original strand, 9284011 - 9284226
Alignment:
Q  37 ttcaatcaaagatttgggcatcaacgtttgagatctatagatac-gagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtta 135  Q
    ||||||||||||||||||| ||||||||  ||||||  ||  |  || |||| ||||||||||||||| ||||||||||||||||||||| ||| |||||    
T  9284011 ttcaatcaaagatttgggcgtcaacgttgcagatctggaggcaatgaatatttcagtcactttaatttcatcatatatttttgtaggcattatgccgtta 9284110  T
Q  136 tatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaata 235  Q
    |||||||||| | | | |||||||| |||||||| |  |||||||||||| | |||| | ||| ||||||||||  ||| | |||||||| |||||||||    
T  9284111 tatgctattatcatggatgttgtgagtttgttcgtagattcatcttttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaata 9284210  T
Q  236 ttattttatttttgtc 251  Q
    | ||||| ||||||||    
T  9284211 tcattttgtttttgtc 9284226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 36 - 247
Target Start/End: Complemental strand, 46991120 - 46990909
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagatacgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtta 135  Q
    |||||||||||||||||||  ||||||||  ||||||| ||| |   |||| ||  |||||||||||||||||||||||||||||||||| ||||||||     
T  46991120 attcaatcaaagatttgggtgtcaacgttgcagatctagagacatatgtatcccgatcactttaattttatcatatatttttgtaggcattatgtcgttc 46991021  T
Q  136 tatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaata 235  Q
    |||||| |||||||   |||||||| ||||||||||  |||||| ||||| | ||||   | | |||||||||| |||||| |||||||| |||||||||    
T  46991020 tatgctgttaacttgaatgttgtgagtttgttcgcagattcatcatttacgtttttagtggcgttgaatgatgtactctatcgatttgaatgaatgaata 46990921  T
Q  236 ttattttatttt 247  Q
    | ||||| ||||    
T  46990920 tcattttttttt 46990909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 36 - 251
Target Start/End: Original strand, 4643957 - 4644173
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||||| |||| |||  |||||   || | | || |||||| |||| ||||||||||||||||||| |||||||||| ||| ||||    
T  4643957 attcaatcaaagatttgggcgtcaaagttgcagatccggaggtcatgaatattccggtcaatttaattttatcatatattattgtaggcattatgccgtt 4644056  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaat 234  Q
    ||||||||||||||| | ||||||||  |||||||||  |||||| ||||| | |||| |  || ||||||||||  ||| | |||||||| ||||||||    
T  4644057 atatgctattaacttggatgttgtgagcttgttcgcagattcatcctttacgtttttagcgatgttgaatgatgtaatctctcgatttgaatgaatgaat 4644156  T
Q  235 attattttatttttgtc 251  Q
    || ||||||||||||||    
T  4644157 atcattttatttttgtc 4644173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 84 - 250
Target Start/End: Complemental strand, 53616591 - 53616425
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||| || |||||||||||||||||| ||| ||||||||||||||||||| | || ||||| ||||||||||  |||||| |||    
T  53616591 tattccggtcactttaatttcattatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcagattcatccttt 53616492  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| |||||||    
T  53616491 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 53616425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 94 - 250
Target Start/End: Original strand, 56199254 - 56199410
Alignment:
Q  94 actttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaa 193  Q
    |||||||||||||||||||||||||||| ||| ||| ||||| ||||||||||||| | || ||||| ||||||||||  |||||| ||||| | ||||     
T  56199254 actttaattttatcatatatttttgtagacattatgccgttacatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttag 56199353  T
Q  194 cagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    ||||| ||||||||||  ||| | |||||||| |||||||||  |||||||||||||    
T  56199354 cagtgttgaatgatgtgatctctcgatttgaatgaatgaataccattttatttttgt 56199410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 34024379 - 34024212
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| |||| ||||||||||||||||||||||||| |||| |||| |||||||||||||||||| | |||||||| ||||||||||  |||||| |||    
T  34024379 tattccggtcattttaattttatcatatatttttgtaagcattatgttgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttt 34024280  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| |||||| |||  ||| | |||||||| |||||||||| |||||  |||||||    
T  34024279 acgtttttagcggtgttgaatggtgtaatctctcgatttgaatgaatgaatatcattttgcttttgtc 34024212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 43444540 - 43444707
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||| ||   || ||||| ||||||||||  |||||| |||    
T  43444540 tattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaatttgaatgctgtgagtttgttcgcagattcatccttt 43444639  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || |  ||||| ||| ||||||||||  ||| |  ||||||| |||||||||| ||||||||||||||    
T  43444640 acgttcttaacggtgttgaatgatgtaatctctcaatttgaatgaatgaatatcattttatttttgtc 43444707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 44947560 - 44947727
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| |||||||||||||||||||||||||||||||||||  || ||||||||| ||||||||| | |||||||| ||||||||||  |||||| |||    
T  44947560 tattccggtcactttaattttatcatatatttttgtaggcattgtgccgttatatgttattaacttggatgttgtgagtttgttcgcagattcatccttt 44947659  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  ||| | ||||| || |||||| ||| |||| |||||||||    
T  44947660 acgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgattatcatttcatttttgtc 44947727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 52097857 - 52097690
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||| ||||||||||| ||| ||||||||| ||||||||| | |||||||| ||| ||||||| |||| | |||    
T  52097857 tattccggtcactttaattttatcatatatctttgtaggcattatgacgttatatggtattaacttggatgttgtgagtttattcgcatattcacccttt 52097758  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||   ||||||||| |||| |||||||||| ||||||||||  |||| ||||||||    
T  52097757 acgtttttagcggtatcgaatgatgtactctgttgatttgaatgaatgaatatcgttttgtttttgtc 52097690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 84 - 250
Target Start/End: Complemental strand, 9645465 - 9645299
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| |||||||||||||||||||||| ||||||||| || ||| ||||||||||||||||||| | || ||||| ||||||||||  |||||| |||    
T  9645465 tattccggtcactttaattttatcatatacttttgtaggtattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatccttt 9645366  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    || | |||  | ||| ||||||||||  ||| | |||||||| |||| ||||||||||| |||||||    
T  9645365 acgttttttgcggtgttgaatgatgtaatctctcgatttgaatgaataaatattattttgtttttgt 9645299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 36 - 230
Target Start/End: Complemental strand, 35964965 - 35964771
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagatacgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtta 135  Q
    |||||||||||||||||| | ||||||||  |||||   ||  | ||||||| |||||||||||||||||||||||||||||||||| || |||| ||||    
T  35964965 attcaatcaaagatttggacgtcaacgttgcagatccggaggcatgagtatttcagtcactttaattttatcatatatttttgtaggaattatgttgtta 35964866  T
Q  136 tatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaat 230  Q
    |||||||||||||| | ||||||||  |||||||||   ||||  ||||| | |||| | ||| |||||| ||| |||||| |||||||| ||||    
T  35964865 tatgctattaacttggatgttgtgagattgttcgcaaactcattctttacgtttttagcggtgttgaatggtgtcctctatcgatttgaatgaat 35964771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 93 - 250
Target Start/End: Original strand, 1532065 - 1532222
Alignment:
Q  93 cactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttta 192  Q
    ||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| | ||||||||  |||||||||  |||||| ||||  | ||||    
T  1532065 cactttaattttatcatatatttttgtagacattatgccgttatatgctattaacttggatgttgtgagcttgttcgcagattcatcctttatgttttta 1532164  T
Q  193 acagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
     | ||| ||||||| ||  ||| | |||||||| |||||||||| |||||||||||||    
T  1532165 gcggtgttgaatgacgtaatctctcgatttgaatgaatgaatatcattttatttttgt 1532222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 36 - 248
Target Start/End: Complemental strand, 45228031 - 45227818
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||||| ||||||||  ||||    |||  | || |||||| ||||||||||||||||||||||||||||| ||||| |||  |||    
T  45228031 attcaatcaaagatttgggcgtcaacgttgcagattcggagaccatgaatattccggtcactttaattttatcatatatttttgtgggcattatgcggtt 45227932  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaat 234  Q
    ||||| ||||||||| | |||||||| |||||||| |  |||||| ||||| | |||| | ||| ||||||||||  ||| | |||||||| ||||||||    
T  45227931 atatgttattaacttggatgttgtgagtttgttcgtagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaat 45227832  T
Q  235 attattttattttt 248  Q
    || ||||| |||||    
T  45227831 atcatttttttttt 45227818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 83 - 251
Target Start/End: Original strand, 12265609 - 12265776
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttt 182  Q
    |||||||| |||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |||||||| ||||||| ||  ||||||  |    
T  12265609 gtattccaatcactttaattttatcatatatttttttaggcattatgccgttatatgctattaactttgatgttgtgagtttgttcacagattcatc-at 12265707  T
Q  183 tacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    ||| | |||| |  || ||||||||||   |||| |||||||| |||||||||| | ||| ||||||||    
T  12265708 tacgtttttagcgatgttgaatgatgtaacctatcgatttgaatgaatgaatatcagtttgtttttgtc 12265776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 96 - 251
Target Start/End: Complemental strand, 3336093 - 3335938
Alignment:
Q  96 tttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaaca 195  Q
    |||||||||||||||||| ||||||||||| | | |||||||||||| ||||||   |||| ||| |||||| |||  |||||| ||||| | |||| |     
T  3336093 tttaattttatcatatatatttgtaggcattacgccgttatatgctaataacttgaatgttttgagtttgtttgcagattcatcctttacgtttttagcg 3335994  T
Q  196 gtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    ||| |||||||||| ||||||||||||||| ||||||||||| |||| ||||||||    
T  3335993 gtgttgaatgatgtactctattgatttgaatgaatgaatattgttttgtttttgtc 3335938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 20569403 - 20569572
Alignment:
Q  84 tattccagtcactttaattttatcatat--atttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctt 181  Q
    |||||| ||||||||||||| |||||||  |||||||||||||| |||| |||||||||||||||||| | |  ||||| ||||||||||  |||||| |    
T  20569403 tattccggtcactttaatttcatcatatatatttttgtaggcattatgttgttatatgctattaacttggataatgtgagtttgttcgcagattcatcct 20569502  T
Q  182 ttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    |||| | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| ||||||||    
T  20569503 ttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 20569572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 92 - 251
Target Start/End: Complemental strand, 10389687 - 10389528
Alignment:
Q  92 tcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttt 191  Q
    |||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| | || ||||| ||||||||    |||||| ||||  | |||    
T  10389687 tcactttaattttatcatatatttttgtagacattatgccgttatatgctattaacttggatgctgtgagtttgttcgtggattcatcctttatgttttt 10389588  T
Q  192 aacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    | | ||| |||||| |||  ||| | |||||||| |||||||||| ||||||||||||||    
T  10389587 agcggtgttgaatggtgtaatctctcgatttgaatgaatgaatatcattttatttttgtc 10389528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 27593773 - 27593686
Alignment:
Q  81 gagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttc 168  Q
    ||||||||| |||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||| | |||||||| |||||||    
T  27593773 gagtattcctgtcactttaattttatcatatatttttgtaggaattatgccgttatatgctattaacttggatgttgtgagtttgttc 27593686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 43153955 - 43153870
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcg 169  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| | |||||||| ||||||||    
T  43153955 tattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctgttaacttggatgttgtgagtttgttcg 43153870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 209
Target Start/End: Original strand, 49410371 - 49410496
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| | || ||||| |||||||||   |||||| |||    
T  49410371 tattcctgtcactttaattttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgatgtgagtttgttcgctgattcatccttt 49410470  T
Q  184 acatctttaacagtggtgaatgatgt 209  Q
    || | |||| | ||| ||||||||||    
T  49410471 acgtttttagcggtgttgaatgatgt 49410496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 83 - 236
Target Start/End: Complemental strand, 18138856 - 18138706
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttt 182  Q
    |||||||  |||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||||||| | |||||||| ||||||||||      || ||    
T  18138856 gtattccgatcacttaaattttatcatatatttttgtagtcattatgccgttatatgctattaacttggatgttgtgagtttgttcgca---gactcctt 18138760  T
Q  183 tacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatat 236  Q
    ||| | |||| | ||| |||||||||| || |||||||||||| ||||||||||    
T  18138759 tacgtttttagcggtgttgaatgatgtactttattgatttgaatgaatgaatat 18138706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 83 - 236
Target Start/End: Complemental strand, 49126069 - 49125919
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttt 182  Q
    |||||||  |||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||||||| | |||||||| ||||||||||      || ||    
T  49126069 gtattccgatcacttaaattttatcatatatttttgtagtcattatgccgttatatgctattaacttggatgttgtgagtttgttcgca---gactcctt 49125973  T
Q  183 tacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatat 236  Q
    ||| | |||| | ||| |||||||||| || |||||||||||| ||||||||||    
T  49125972 tacgtttttagcggtgttgaatgatgtactttattgatttgaatgaatgaatat 49125919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 84 - 209
Target Start/End: Original strand, 6972958 - 6973083
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| || ||||||||||||||||||||||||||||| || ||| ||||||||||||||||||| | || | ||| ||||||| ||  |||||| ||     
T  6972958 tattccggtgactttaattttatcatatatttttgtaggtattatgccgttatatgctattaacttggatgctatgagtttgttcacagattcatccttc 6973057  T
Q  184 acatctttaacagtggtgaatgatgt 209  Q
    |||| |||||| ||| ||||||||||    
T  6973058 acatttttaacggtgttgaatgatgt 6973083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 84 - 247
Target Start/End: Complemental strand, 50766453 - 50766290
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||| ||||||||||||||||||||| |||  ||||||||||||||||||   || ||||| |||||||| |  |||||| | |    
T  50766453 tattccggtcactttaatttcatcatatatttttgtaggcattatgctgttatatgctattaacttgaatgctgtgagtttgttcgtagattcatcatct 50766354  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttt 247  Q
    || | |||| | ||| ||||||||||  ||| | ||||| || |||||||||| ||||| ||||    
T  50766353 acgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaatatcattttgtttt 50766290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 84 - 249
Target Start/End: Original strand, 868310 - 868476
Alignment:
Q  84 tattccagtcactttaattttatcatatattttt-gtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttt 182  Q
    |||||| ||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||   | |||||| ||||||| ||  |||| | ||    
T  868310 tattccggtcactttaattttatcatatatttttggtaggcattatgccgttatatgctattaacttgaatattgtgattttgttcacagattcaacctt 868409  T
Q  183 tacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttg 249  Q
    ||  | |||| | ||| | |||||| |  ||| | ||||| ||||||||||||| ||||||||||||    
T  868410 tatgtttttagcggtgttaaatgatataatctctcgatttaaacgaatgaatatcattttatttttg 868476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 84 - 230
Target Start/End: Complemental strand, 37188536 - 37188390
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| |||||||||||||||||||||| ||||||||||||  |||| ||||||||||||||||| | || ||||| | ||||||||  || |||||||    
T  37188536 tattcctgtcactttaattttatcatataattttgtaggcattgtgtcattatatgctattaacttggatgctgtgagtgtgttcgcagatttatctttt 37188437  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaat 230  Q
     | | |||| | ||| ||||||||||  ||| | |||||||| ||||    
T  37188436 gcgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaat 37188390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 84 - 230
Target Start/End: Original strand, 47417810 - 47417956
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    ||||||| |||||||||||| ||||||||||||||||||||| ||| ||||||||| |||||||||   || ||||| ||||||| ||  |||||| |||    
T  47417810 tattccattcactttaatttcatcatatatttttgtaggcattatgccgttatatgttattaacttgaatgctgtgagtttgttcacagattcatccttt 47417909  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaat 230  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| ||||    
T  47417910 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaat 47417956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 209
Target Start/End: Original strand, 21090290 - 21090415
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||| || |||||||||||| ||||||||||||| ||||||||| | |  ||||| |||||| |||  |||||| |||    
T  21090290 tattccggtcactttaattttatcatctacttttgtaggcattatgtcgttatatgttattaacttggatagtgtgagtttgtttgcagattcatccttt 21090389  T
Q  184 acatctttaacagtggtgaatgatgt 209  Q
    || | |||| | ||| ||||||||||    
T  21090390 acgtttttagcggtgttgaatgatgt 21090415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 32952692 - 32952627
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactt 149  Q
    |||||| |||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  32952692 tattccggtcaatttaattttatcttatatttttgtaggcattatgtcgttatatgctattaactt 32952627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 242
Target Start/End: Original strand, 35261347 - 35261497
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctt 190  Q
    |||| ||||||||||||| |||| ||||||| ||| |||   ||||||||||||||||| | |||||||| |||||| |||  |||||| ||||| | ||    
T  35261347 gtcattttaattttatcagatatgtttgtagacattatgcacttatatgctattaacttggatgttgtgagtttgtttgcagattcatcctttacgtttt 35261446  T
Q  191 taacagtggtgaatgatgttctctattgatttgaacgaatgaatattatttt 242  Q
    ||  |||| |||||||||| ||| || |||||||| |||||||||| |||||    
T  35261447 tagaagtgttgaatgatgtactc-atcgatttgaatgaatgaatatcatttt 35261497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 49680692 - 49680750
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactt 149  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  49680692 gtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgttattaactt 49680750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 246
Target Start/End: Original strand, 29966526 - 29966636
Alignment:
Q  136 tatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaata 235  Q
    |||||||||||||| | |||||||| ||||||||||  |||||| ||||| | ||||||  || ||||||||||  | | ||||||| || |||||||||    
T  29966526 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttaacgatgttgaatgatgtaatttcttgatttaaatgaatgaata 29966625  T
Q  236 ttattttattt 246  Q
    |||||||||||    
T  29966626 ttattttattt 29966636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 29965735 - 29965824
Alignment:
Q  37 ttcaatcaaagatttgggcatcaacgtttgagatctatagatacgag-tattccagtcactttaattttatcatatatttttgtaggcat 125  Q
    ||||||||||||||||||||||||||||  |||||   || ||   | |||||| ||||||||||||| |||||||||||||||||||||    
T  29965735 ttcaatcaaagatttgggcatcaacgttgcagatccggaggtaatggatattccggtcactttaatttcatcatatatttttgtaggcat 29965824  T

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Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 7273758 - 7273714
Alignment:
Q  81 gagtattccagtcactttaattttatcatatatttttgtaggcat 125  Q
    ||||||| |||| | ||||||||||||||||||||||||||||||    
T  7273758 gagtatttcagttattttaattttatcatatatttttgtaggcat 7273714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 32766680 - 32766746
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttc 168  Q
    ||||||||||| | ||||||||||| |||||||| |||||||||||||| | || ||||| |||||||    
T  32766680 ttttatcatat-tatttgtaggcattatgtcgttgtatgctattaacttgggtgctgtgagtttgttc 32766746  T

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Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 33921202 - 33921290
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcat 172  Q
    ||||| |||| ||||  |||||||||||| | |||||||||||  | | ||| |||||||||||||| | |||||||| |||||||||||    
T  33921202 gtatttcagtgacttagattttatcatat-tatttgtaggcattgtatagttgtatgctattaacttggatgttgtgagtttgttcgcat 33921290  T

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Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 48006629 - 48006666
Alignment:
Q  155 ttgtgaatttgttcgcatcttcatcttttacatcttta 192  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  48006629 ttgtgaatttgttcgcatattcatcttttacattttta 48006666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 2520958 - 2521014
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||||||||||  || |||| |||||||||||||| | |||||||| ||||||||||    
T  2520958 tttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgca 2521014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 119
Target Start/End: Complemental strand, 31381606 - 31381578
Alignment:
Q  91 gtcactttaattttatcatatatttttgt 119  Q
    |||||||||||||||||||||||||||||    
T  31381606 gtcactttaattttatcatatatttttgt 31381578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 31891217 - 31891161
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||||||||||  || |||| |||||||||||||| | |||||||| ||||||||||    
T  31891217 tttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgca 31891161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 168
Target Start/End: Original strand, 36161876 - 36161943
Alignment:
Q  100 attttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttc 168  Q
    |||||||||||| | |||||||||||   ||||||||||| ||||||||| | |||||||| |||||||    
T  36161876 attttatcatat-tatttgtaggcatttggtcgttatatgttattaacttgggtgttgtgagtttgttc 36161943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 36184687 - 36184762
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgtt 167  Q
    |||||||| |||||||||||  | ||| |||||||  ||||||| |||||||||||||| | |||||||| ||||||    
T  36184687 gtcactttgattttatcatac-tatttctaggcattttgtcgttgtatgctattaacttggatgttgtgagtttgtt 36184762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 36194887 - 36194943
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||||||||||  || |||| |||||||||||||| | |||||||| ||||||||||    
T  36194887 tttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgca 36194943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 84 - 248
Target Start/End: Complemental strand, 35475279 - 35475115
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||| | |||||| || |||||| |||    
T  35475279 tattccagtcactttaattttatcatatatttttgtaggcataacgtcgttatatgctattaacttggatgttgtgagtatgttcgtatattcatccttt 35475180  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttattttt 248  Q
    || | |||| | ||| ||||||||||  ||| |  ||||||| |||||||||| |||||||||||    
T  35475179 acgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatatcattttattttt 35475115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 4954130 - 4954297
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| || |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||| ||||||| ||| |||||| |||    
T  4954130 tattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaactttgatgttgtgagtttgttcacatattcatccttt 4954229  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    |||| |||| | ||| |||| |||||  ||| | |||||||| |||| ||||| || |||||||||||    
T  4954230 acatttttagcggtgttgaacgatgtaatctctcgatttgaatgaataaatatcatcttatttttgtc 4954297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 7247097 - 7247264
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| || |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | || ||||| ||||||||||  |||||| |||    
T  7247097 tattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatccttt 7247196  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||||||||||||    
T  7247197 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtc 7247264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 43148865 - 43149032
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| || |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||| ||||||||||  |||||| |||    
T  43148865 tattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttt 43148964  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    |||| |||| | ||| |||||||| |  ||| | |||||||| |||||||||| ||| ||||||||||    
T  43148965 acatttttagcggtgttgaatgatataatctctcgatttgaatgaatgaatatcattgtatttttgtc 43149032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 94 - 251
Target Start/End: Original strand, 7241932 - 7242089
Alignment:
Q  94 actttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaa 193  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | || ||||| ||||||||||  |||||| ||||| | ||||     
T  7241932 actttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttag 7242031  T
Q  194 cagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    | ||| ||||||||||  ||| | |||||||| |||||||||| ||||||||||||||    
T  7242032 cggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtc 7242089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 83 - 236
Target Start/End: Original strand, 15571044 - 15571197
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttt 182  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||| ||||||||||  ||||||  |    
T  15571044 gtattccagtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccat 15571143  T
Q  183 tacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatat 236  Q
    ||  | ||||   ||| ||||||||||  ||||| |||||||| ||||||||||    
T  15571144 tatgtttttagtggtgttgaatgatgtaatctatggatttgaatgaatgaatat 15571197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 21060224 - 21060057
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||| | |||||||| | |||||| |  |||||| |||    
T  21060224 tattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatattctatcaacttggatgttgtgagtatgttcgtagattcatccttt 21060125  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| ||||||||    
T  21060124 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 21060057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 27266800 - 27266633
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| | || ||||| ||||||||||  |||||| |||    
T  27266800 tattccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcattt 27266701  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| ||| |||||  ||||| ||||||||    
T  27266700 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaacgaataccattttgtttttgtc 27266633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 92 - 250
Target Start/End: Complemental strand, 3271335 - 3271177
Alignment:
Q  92 tcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttt 191  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| | |||| ||| ||||||||||  |||||| ||||| | |||    
T  3271335 tcactttaattttatcatatatttttgtaagcattatgtcgttatatgctattaacttggatgttatgagtttgttcgcagattcatcctttacgttttt 3271236  T
Q  192 aacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    | | ||| ||||||||||  ||| | |||||||| |||||| ||| ||||| |||||||    
T  3271235 agcggtgttgaatgatgtaatctctcgatttgaatgaatgattatcattttgtttttgt 3271177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 10649782 - 10649947
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||| ||||||||||||| ||| ||||||||| |||||| || | ||||||||   ||||||||  |||||| |||    
T  10649782 tattccggtcactttaattttatcatatgtttttgtaggcattatgccgttatatggtattaaattggatgttgtga--gtgttcgcagattcatcattt 10649879  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||||| ||| ||||||||||  ||| | |||||||| |||||||||| ||||||||||||||    
T  10649880 acgtttttaacggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtc 10649947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 91 - 251
Target Start/End: Original strand, 34881862 - 34882022
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctt 190  Q
    |||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||| |||||| |||  |||||| ||||  | ||    
T  34881862 gtcactttaattatatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgtttgcagattcatcctttatgtttt 34881961  T
Q  191 taacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| ||||||||    
T  34881962 tagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 34882022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 84 - 250
Target Start/End: Original strand, 781526 - 781692
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| | |||||||| | | ||||||  |||||| ||     
T  781526 tattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgctattaacttggatgttgtgagtatattcgcagattcatccttc 781625  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| |||||||    
T  781626 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 781692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 84 - 249
Target Start/End: Complemental strand, 18677406 - 18677242
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| |||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||| | |||||||  ||||||||||  ||||||  ||    
T  18677406 tattccggtcactttaattttatcatatatttttgtaagcattatgccgttatatgctattaacttggatgttgtgtgtttgttcgcagattcatc-ctt 18677308  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttg 249  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| ||||||    
T  18677307 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttg 18677242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 91 - 251
Target Start/End: Original strand, 30298989 - 30299149
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctt 190  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||| ||| | ||||||||  |||||| ||||| | ||    
T  30298989 gtcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttctgagtatgttcgcagattcatcctttacgtttt 30299088  T
Q  191 taacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | ||| |||||||| |  | | | ||||| || |||||||||| ||||||||||||||    
T  30299089 tagcggtgttgaatgatttaatatctcgatttaaatgaatgaatatcattttatttttgtc 30299149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 27752063 - 27752230
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||  | ||||||||||||||||| | || ||||| | |||||| |  ||||||||||    
T  27752063 tattccggtcactttaattttatcatatatttttgtaggcattataccattatatgctattaacttggatgctgtgagtatgttcgtagattcatctttt 27752162  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||  ||||||||    
T  27752163 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcatttcgtttttgtc 27752230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 16981428 - 16981597
Alignment:
Q  84 tattccagtcactttaattttatcatat--atttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctt 181  Q
    |||||| || ||||||||||||||||||  |||||||||||||| || |||||||||||||||||||| | |||||||| ||||||||||  |||||  |    
T  16981428 tattccggtgactttaattttatcatatatatttttgtaggcattatatcgttatatgctattaacttggatgttgtgagtttgttcgcagattcattct 16981527  T
Q  182 ttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    |||| | |||| | ||| ||||||||||  | | | ||||||||  ||||||||| ||||||||||||||    
T  16981528 ttacgtttttagcggtgttgaatgatgtaatatctcgatttgaataaatgaatatcattttatttttgtc 16981597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 84 - 250
Target Start/End: Complemental strand, 41184381 - 41184216
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||||||||||||||||||||||||||||||||  ||||| ||| ||||||||||||||||||| | || ||||| ||||||||||  |||||| |||    
T  41184381 tattccagtcactttaattttatcatatatttttgccggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatccttt 41184282  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    || | |||| | || || ||||||||  ||| | |||||||| ||||| |||| ||||| |||||||    
T  41184281 acgtttttagcggt-gttaatgatgtaatctctcgatttgaatgaatgcatatcattttgtttttgt 41184216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 83 - 236
Target Start/End: Complemental strand, 20257638 - 20257485
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttt 182  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| | || ||||| ||||||| ||  |||||| ||    
T  20257638 gtattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgttattaacttggatgatgtgagtttgttcacagattcatcatt 20257539  T
Q  183 tacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatat 236  Q
    ||| | |||| |  || |||||||| |  ||||| ||||||||  |||||||||    
T  20257538 tacgtttttagcgatgttgaatgatataatctatcgatttgaattaatgaatat 20257485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 19259802 - 19259666
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||||| ||||||||  ||||| | ||   | |  |||||| ||||||||||||||||||||||||||||||||||| ||| ||||    
T  19259802 attcaatcaaagatttgggcgtcaacgttgcagatccaaaggccatggatattccggtcactttaattttatcatatatttttgtaggcattatgccgtt 19259703  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgca 171  Q
    ||||||||||||||| | || ||||| ||||||||||    
T  19259702 atatgctattaacttggatgctgtgagtttgttcgca 19259666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 2057779 - 2057608
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||  ||||||| | |||||||| |||  |||||  |||||| |||    
T  2057779 tattccggtcactataattttatcatatatttttgtaggcattatgtcgttatatgcagttaacttagatgttgtgagttt-ctcgcacattcatccttt 2057681  T
Q  184 acatctttaacagtggtgaatgatg--ttctct---attgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| |||||||||  ||||||    |||||||||| |||||||||| ||||||||||||||    
T  2057680 acgtttttagcggtgttgaatgatgtattctcttaatttgatttgaatgaatgaatatcattttatttttgtc 2057608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 102 - 250
Target Start/End: Complemental strand, 43008238 - 43008090
Alignment:
Q  102 tttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtg 201  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| | |||| ||| ||||||| ||  || ||| ||||| | ||||   ||| ||    
T  43008238 tttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttatgagtttgttctcaaatttatcctttacgtttttagtggtgttg 43008139  T
Q  202 aatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    ||||||||  ||| | |||||||| |||||||||||||||| |||||||    
T  43008138 aatgatgtaatctctcgatttgaatgaatgaatattattttgtttttgt 43008090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 208
Target Start/End: Complemental strand, 7612986 - 7612875
Alignment:
Q  97 ttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacag 196  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||   |||||||| ||||||||||  |||||||||||| | |||| | |    
T  7612986 ttaattttatcatatatttttgtaggcattatgtcgttctatgctattaaattgaatgttgtgagtttgttcgcaaattcatcttttacgtttttagcgg 7612887  T
Q  197 tggtgaatgatg 208  Q
    || |||||||||    
T  7612886 tgttgaatgatg 7612875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 28235731 - 28235828
Alignment:
Q  92 tcactttaattttatcatatatttttgtaggcataatgtcgt--tatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacat 187  Q
    |||||||||||||||||||||||||||||||||| ||| |||  |||||||||||||||| | |||||||| ||||||||||  |||||| |||||||    
T  28235731 tcactttaattttatcatatatttttgtaggcattatgccgttatatatgctattaacttggatgttgtgagtttgttcgcagattcatcatttacat 28235828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 94 - 251
Target Start/End: Complemental strand, 7150266 - 7150109
Alignment:
Q  94 actttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaa 193  Q
    |||||||||||||||||||||||||||| ||| ||| |||||||||||||||| || | || ||||| ||||||||||  ||  |  ||||| | ||||     
T  7150266 actttaattttatcatatatttttgtagtcattatgccgttatatgctattaatttggatgctgtgagtttgttcgcagatttgttctttacgtttttag 7150167  T
Q  194 cagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    | ||| |||||||| |  ||| | |||||||| |||||||||| ||||||||||||||    
T  7150166 cggtgttgaatgatataatctctcgatttgaatgaatgaatatcattttatttttgtc 7150109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 19280886 - 19280800
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||||| || |||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||| ||||||||||    
T  19280886 tattccggtgactttaatattatcatatatttttgtaggcattatg-cgttatatgctattaacttggatgttgtgagtttgttcgca 19280800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 11768144 - 11768224
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||| ||| | || ||||| ||||||||||    
T  11768144 gtcactttaattttatcatatatttttgtagccattatgccgttatatgctattatcttggatgatgtgagtttgttcgca 11768224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 251
Target Start/End: Original strand, 30298296 - 30298514
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgt- 133  Q
    |||||||||||||||||||| ||||||||  ||||||  ||   | |  |||||| | ||||||||||||||||||||||||||||||||| |||  ||     
T  30298296 attcaatcaaagatttgggcgtcaacgttgcagatctggaggccatggatattccggccactttaattttatcatatatttttgtaggcattatgctgtt 30298395  T
Q  134 -tatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatga 232  Q
     |||||||||||||||| | |||||||| | ||||||||  |||||  ||||| | |||| | ||| |||||||| |  ||| | ||||| ||  |||||    
T  30298396 atatatgctattaacttggatgttgtgagtatgttcgcagattcattctttacgtttttagcggtgttgaatgatatagtctctcgatttaaataaatga 30298495  T
Q  233 atattattttatttttgtc 251  Q
    |||| ||||| ||||||||    
T  30298496 atatcattttgtttttgtc 30298514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 26578397 - 26578455
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactt 149  Q
    ||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||    
T  26578397 gtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaactt 26578455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 42886615 - 42886681
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactt 149  Q
    ||||||| |||| ||||||||||| |||||||||||||||||| ||| |||||||||||||||||||    
T  42886615 gtattccggtcaatttaattttataatatatttttgtaggcattatgccgttatatgctattaactt 42886681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 236
Target Start/End: Original strand, 42579977 - 42580178
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||||| ||||||||  |||||   ||   | || |||||| |||||||||||||||||||||||||||| ||  || ||| ||||    
T  42579977 attcaatcaaagatttgggcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgcagatattatgccgtt 42580076  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaat 234  Q
    |||||||||||||||   || ||||| ||||||   |  |||||| ||||| | |||| | ||| ||||||||||  ||| | |||||||| ||||||||    
T  42580077 atatgctattaacttgaatgctgtgagtttgtttatagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaat 42580176  T
Q  235 at 236  Q
    ||    
T  42580177 at 42580178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 43261760 - 43261704
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgc 140  Q
    |||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  43261760 tattccggtcactttaatgttatcatatatttttgtaggcattatgtcgttatatgc 43261704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 19100627 - 19100552
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagatacgagtattccagtcactttaattttatcatat 111  Q
    |||||||||| ||||||  ||||||||||  ||||||  ||| | |||||||||||||||||||||||||||||||    
T  19100627 attcaatcaatgatttgaacatcaacgttccagatcttaagacatgagtattccagtcactttaattttatcatat 19100552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 250
Target Start/End: Original strand, 13468744 - 13468901
Alignment:
Q  92 tcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttt 191  Q
    |||||||| ||||||||||| | | |||||||||  |||||| ||||||||||||||||| | |||||| |||||||| |  |||||| ||||  | |||    
T  13468744 tcactttagttttatcatat-tatgtgtaggcattttgtcgtcatatgctattaactttgattttgtgagtttgttcgtaaattcatcatttatgttttt 13468842  T
Q  192 aacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    |    || |||||| ||| || |||||||||||  ||||||||||| |||| |||||||    
T  13468843 agatatgttgaatggtgtactttattgatttgattgaatgaatattgttttgtttttgt 13468901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 142
Target Start/End: Complemental strand, 41418655 - 41418605
Alignment:
Q  92 tcactttaattttatcatatatttttgtaggcataatgtcgttatatgcta 142  Q
    |||||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  41418655 tcactttaattttatcatatatttttgtggacattatgtcgttatatgcta 41418605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 7886879 - 7886714
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| |||||| || ||||||||||| ||||||||||||| ||   |||||||||||||||||| | |  ||||| ||||||| ||  ||||||||||    
T  7886879 tattccggtcactatagttttatcatat-tttttgtaggcattattctgttatatgctattaacttggatactgtgagtttgttcacagattcatctttt 7886781  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || |  ||| | ||| ||||||||||  |||  | ||||||| ||||||||||  |||| ||||||||    
T  7886780 acgttcttagcggtgttgaatgatgtaatct-ctcatttgaatgaatgaatatcgttttgtttttgtc 7886714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 8984917 - 8984859
Alignment:
Q  113 tttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||||||||||||  ||||||||||| |||||||||| | |||||||| ||||||||||    
T  8984917 tttttgtaggcattttgtcgttatatactattaacttggatgttgtgagtttgttcgca 8984859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 236
Target Start/End: Complemental strand, 22978858 - 22978713
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctt 190  Q
    |||||||| ||||||| | |||||||||||| ||| ||| |||||||||||||||  || | || | | | ||| ||||||  |||||| ||||| |  |    
T  22978858 gtcactttcattttataaaatatttttgtagccattatgccgttatatgctattagtttggatgatttaagtttattcgcaaattcatcctttacgttat 22978759  T
Q  191 taacagtggtgaatgatgttctctattgatttgaacgaatgaatat 236  Q
    || ||||| |||||||||| || ||| |||| ||| ||||||||||    
T  22978758 tagcagtgttgaatgatgtactttatcgattagaatgaatgaatat 22978713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 13422107 - 13422161
Alignment:
Q  131 cgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    |||| |||||||||||||| | |||||||| ||||||||||| |||||| |||||    
T  13422107 cgttttatgctattaacttggatgttgtgagtttgttcgcatattcatcctttac 13422161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 34945538 - 34945607
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    ||||||||||| | ||| |||||||  ||||||| |||||||||||||| | |||||||| ||||||||||    
T  34945538 ttttatcatat-tatttataggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgca 34945607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 38597942 - 38598011
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    ||||||||||| | |||||||||||  || |||| |||||||||||||| | |||||||| ||||||||||    
T  38597942 ttttatcatat-tatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgca 38598011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 185
Target Start/End: Complemental strand, 10332491 - 10332407
Alignment:
Q  100 attttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    |||| ||||||| |||||||||||||  |||| ||||||||||||||||| | || ||||| ||||||| ||  |||||| |||||    
T  10332491 atttcatcatat-tttttgtaggcattttgtctttatatgctattaacttgggtgatgtgagtttgttcacagattcatcctttac 10332407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 237
Target Start/End: Original strand, 11192515 - 11192659
Alignment:
Q  92 tcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttt 191  Q
    ||||||||| |||||| ||| | |||||| ||||  ||||||| |||| ||||||||||| |||||| |||||||| |||  || ||| ||||| | |||    
T  11192515 tcactttaaatttatcgtat-tatttgtaagcattttgtcgttgtatgttattaactttgatgttgtaaatttgttggcaggtttatcatttacgttttt 11192613  T
Q  192 aacagtggtgaatgatgttctctattgatttgaacgaatgaatatt 237  Q
    |||  |  | |||||| || |||||  ||||||| |||||||||||    
T  11192614 aacgatattaaatgatattttctatcaatttgaatgaatgaatatt 11192659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 2979236 - 2979180
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||||||||||  || |||| |||||||||||||| | |||||||| ||||||||||    
T  2979236 tttgtaggcattgtgccgttgtatgctattaacttggatgttgtgagtttgttcgca 2979180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 27576340 - 27576312
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtt 64  Q
    |||||||||||||||||||||||||||||    
T  27576340 attcaatcaaagatttgggcatcaacgtt 27576312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 168
Target Start/End: Original strand, 41630646 - 41630713
Alignment:
Q  100 attttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttc 168  Q
    |||||||||||| | ||||||| |||  ||||||| |||||||||||||| | |||||||| |||||||    
T  41630646 attttatcatat-tatttgtagacattttgtcgttgtatgctattaacttaggtgttgtgagtttgttc 41630713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 2e-40; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 83 - 251
Target Start/End: Complemental strand, 9986284 - 9986116
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttt 182  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||| ||||||||||  |||||| ||    
T  9986284 gtattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctt 9986185  T
Q  183 tacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    ||| | |||| | ||| ||||||||||  ||| | |||||| | |||||||||| ||||| ||||||||    
T  9986184 tacgtttttagcggtgttgaatgatgtaatctctcgatttggatgaatgaatatcattttgtttttgtc 9986116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 92 - 250
Target Start/End: Original strand, 4228270 - 4228429
Alignment:
Q  92 tcactttaatttt-atcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctt 190  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| | |||||||| ||||||||||  |||||| ||||||| ||    
T  4228270 tcactttaatttttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacatttt 4228369  T
Q  191 taacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    || | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| |||||||    
T  4228370 tagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 4228429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 8806006 - 8806173
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| |||||||||||||||||||||||||||||||||||  || ||||||||||||||||||| | ||||||||  |||||||||  |||||| |||    
T  8806006 tattccggtcactttaattttatcatatatttttgtaggcattttgccgttatatgctattaacttggatgttgtgagattgttcgcagattcatccttt 8806105  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| |  || ||||||||||  ||| | |||||||| |||||||||| ||||||||||||||    
T  8806106 acgtttttagcgatgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtc 8806173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 8971569 - 8971402
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| | || ||||| ||||||||||| |||||| |||    
T  8971569 tattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgctattaacttggatgctgtgagtttgttcgcatattcatccttt 8971470  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    ||||  ||| | ||| ||||||||||  ||| | |||||||| ||||| |||| ||||| ||||||||    
T  8971469 acattcttagcggtgttgaatgatgtaatctctcgatttgaatgaatggatatcattttgtttttgtc 8971402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 9374511 - 9374337
Alignment:
Q  81 gagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgct----attaactttgttgttgtgaatttgttcgcatcttc 176  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||    ||||| || | |||||||||||| ||||||| |||    
T  9374511 gagtattccagacactttaattttatcatgtatttttgtaggcattatgtcgttatatgctactcattaatttggatgttgtgaattttttcgcatattc 9374412  T
Q  177 atcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    ||| ||||| | |||| | ||| |||||||||| |||| | |||||||| ||||||||||  |||| ||||||||    
T  9374411 atcatttacgtttttagccgtgttgaatgatgtactctgtcgatttgaatgaatgaatatcgttttgtttttgtc 9374337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 36 - 251
Target Start/End: Complemental strand, 20047072 - 20046856
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||| ||||||||||  |||||   ||   | || |||||| || |||||||||||||||||||||||||||||||| ||||||||    
T  20047072 attcaatcaaagatttggacatcaacgttgcagatccggaggccatgaatattccggtgactttaattttatcatatatttttgtaggcattatgtcgtt 20046973  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaat 234  Q
    ||||  ||||||||| | || ||||| ||||||||||  |||||| ||||| | |||| | ||| ||||||||||  ||| | ||||| || ||||||||    
T  20046972 atatcttattaacttggatgctgtgattttgttcgcagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaat 20046873  T
Q  235 attattttatttttgtc 251  Q
    || ||||||||||||||    
T  20046872 atcattttatttttgtc 20046856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 27249092 - 27248925
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||| |||||||||||||||| |||| ||| ||||||||||||||||||| | |||||||| ||||||||||  |||||| |||    
T  27249092 tattccggtcactttaatttcatcatatatttttgtacgcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttt 27248993  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| |||||||| |  ||| | |||||||| |||||||||| ||||| ||||||||    
T  27248992 acgtttttagcggtgttgaatgatataatctctcgatttgaatgaatgaatatcattttgtttttgtc 27248925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 84 - 248
Target Start/End: Complemental strand, 38575426 - 38575263
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||| | |||||||| ||||||||||  |||||| |||    
T  38575426 tattccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattatcttggatgttgtgagtttgttcgcagattcatccttt 38575327  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttattttt 248  Q
    |  | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| |||||    
T  38575326 atgt-tttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgttttt 38575263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 84122 - 83955
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| | |||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||| | || ||||| ||||||||||  |||||| |||    
T  84122 tattccggccactttaattttatcatatattttcgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatccttt 84023  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  | | | |||||||| |||||||||  ||||||||||||||    
T  84022 acgtttttagcggtgttgaatgatgtaatatctcgatttgaatgaatgaataccattttatttttgtc 83955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 94 - 251
Target Start/End: Original strand, 41431178 - 41431335
Alignment:
Q  94 actttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaa 193  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| |||||||||| | |||||||| ||| ||||||  || ||| ||||| | ||||     
T  41431178 actttaattttatcatatatttttgtaggcattatgccgttatatactattaacttggatgttgtgagtttattcgcagatttatcctttacgtttttag 41431277  T
Q  194 cagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    | ||| ||||| ||||  ||| | |||||||| |||||||||| ||||||||||||||    
T  41431278 cggtgttgaataatgtaatctctcgatttgaatgaatgaatatcattttatttttgtc 41431335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 4192977 - 4193144
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | |  ||||| | |||||| |  |||||| |||    
T  4192977 tattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttagatactgtgagtgtgttcggagattcatccttt 4193076  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | | | ||||||||||  ||| | |||||||| |||||||||| ||||| ||||||||    
T  4193077 acgtttttagcggcgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 4193144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 7015652 - 7015485
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | || ||||| ||||||||||  |||||   ||    
T  7015652 tattcccgtcgctttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcattcgtt 7015553  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| |||| ||||| ||||| ||||||||    
T  7015552 acgtttttagctgtgttgaatgatgtaatctctcgatttgaatgaataaatatcattttgtttttgtc 7015485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 34600354 - 34600521
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | || || || ||||||| ||  |||||| |||    
T  34600354 tattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgcgagtttgttcacagattcatccttt 34600453  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| |||| |||||  ||| | |||||||| ||||| |||| ||||| ||||||||    
T  34600454 acgtttttagcggtgttgaacgatgtaatctctcgatttgaatgaatggatatcattttgtttttgtc 34600521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 209
Target Start/End: Original strand, 27477239 - 27477413
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagatacgag-tattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||||||||||||||  |||||   |||    || |||| | ||||||||||||||||||||||||||||||||||| ||  ||||    
T  27477239 attcaatcaaagatttgggcatcaacgttgcagatcggaagaccatagatatttcggtcactttaattttatcatatatttttgtaggcattataccgtt 27477338  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgt 209  Q
    | || |||||||||| | |||||||| | ||||||||  |||||| ||||||| ||||||| || ||||||||||    
T  27477339 aaatactattaacttggatgttgtgagtatgttcgcagattcatcatttacatttttaacaatgttgaatgatgt 27477413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 33229081 - 33229016
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactt 149  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33229081 tattccagtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaactt 33229016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 250
Target Start/End: Complemental strand, 459217 - 459051
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttt 182  Q
    ||||| |||||| |||||||||||||||||||||||||| ||| ||| | ||||||||||||||||||| |||| ||| |||||||| |  || ||||||    
T  459217 gtatttcagtcattttaattttatcatatatttttgtagacattatgccattatatgctattaactttgatgttttgagtttgttcgtagatt-atcttt 459119  T
Q  183 tacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    ||  | ||||   ||| |||||||| | |||||| |||||||| ||||||||||  ||||||||||||    
T  459118 tatgtttttagtggtgttgaatgatatactctatcgatttgaatgaatgaatatcgttttatttttgt 459051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 208
Target Start/End: Original strand, 17319459 - 17319584
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttt 182  Q
    ||||||| ||||||||||||||||||||||||| | ||||||| ||||||||||||| ||||||||| | ||| |||| ||||||||||  |||||| ||    
T  17319459 gtattccggtcactttaattttatcatatatttgtataggcattatgtcgttatatgttattaacttggatgtcgtgagtttgttcgcagattcatcctt 17319558  T
Q  183 tacatctttaacagtggtgaatgatg 208  Q
    ||| | |||| | ||| |||||||||    
T  17319559 tacgtttttaccggtgttgaatgatg 17319584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 248
Target Start/End: Original strand, 27949517 - 27949730
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||||| ||||||||  ||||| | ||   | |  |||||||||||||||||||||||||||||||||| ||| ||| ||| ||||    
T  27949517 attcaatcaaagatttgggcgtcaacgttgcagatccaaaggccatggatattccagtcactttaattttatcatatatttttatagacattatgacgtt 27949616  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaat 234  Q
     |||||||||||||| | |||||||| |||||||| |  |||||| ||||| | |||| | ||| |||||||| |  | | | ||||| || ||||||||    
T  27949617 gtatgctattaacttggatgttgtgagtttgttcggagattcatcatttacgtttttagcggtgttgaatgatataatatctcgatttaaatgaatgaat 27949716  T
Q  235 attattttattttt 248  Q
    || ||||| |||||    
T  27949717 atcattttgttttt 27949730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 84 - 184
Target Start/End: Complemental strand, 32679051 - 32678952
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| || |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||| |||||||| ||||||||||  |||||| |||    
T  32679051 tattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaac-ttgatgttgtgagtttgttcgcagattcatcattt 32678953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 25087177 - 25087342
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||||||||||||||| |||||||||| |||||||||||| | | ||||||||||||||||||| | || ||||| ||||||| ||  |||||| |||    
T  25087177 tattccagtcactttaatcttatcatata-ttttgtaggcattaagccgttatatgctattaacttggatgatgtgagtttgttcccagattcatccttt 25087275  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | ||||   ||| ||||||||||  ||| | |||||||| |||||||||| ||||| ||||||||    
T  25087276 acgt-tttagtggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 25087342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 92 - 250
Target Start/End: Complemental strand, 21570341 - 21570183
Alignment:
Q  92 tcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttt 191  Q
    |||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||   || ||| | ||||||||||  |||| | ||||  | |||    
T  21570341 tcactttaattttatcatatatttttgtaggcattatgccgttgtatgctattaacttgaatgctgtaagtttgttcgcagattcagcctttatgttttt 21570242  T
Q  192 aacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    | | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| |||||||    
T  21570241 agcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 21570183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 32913387 - 32913481
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    |||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||| | |||||||| | ||||||||  |||||| |||||    
T  32913387 gtcactttaattttatcatatatttttgtatgcattatgccgttatatgctattaacttggatgttgtgagtatgttcgcagattcatcctttac 32913481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 131 - 248
Target Start/End: Original strand, 30420856 - 30420973
Alignment:
Q  131 cgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaat 230  Q
    ||||||||||||||||||| | |||||||| ||||||||||  |||||| ||||||| |||| | ||| ||||||||||  ||| | |||||||| ||||    
T  30420856 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacatttttagcggtgttgaatgatgtaatctctcgatttgaatgaat 30420955  T
Q  231 gaatattattttattttt 248  Q
    |||||| |||||||||||    
T  30420956 gaatatcattttattttt 30420973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 92 - 251
Target Start/End: Complemental strand, 2808405 - 2808247
Alignment:
Q  92 tcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttt 191  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | || |||| | |||||| ||  |||||| ||||| | |||    
T  2808405 tcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtg-agttgttcacagattcatcctttacgttttt 2808307  T
Q  192 aacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    | |  || ||||||||    ||| | |||||||| |||||||||| ||||| ||||||||    
T  2808306 agcgatgttgaatgatacaatctctcgatttgaatgaatgaatatcattttgtttttgtc 2808247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 36 - 209
Target Start/End: Complemental strand, 40659922 - 40659748
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||||| |||||||| ||||||   ||   | |  |||||| ||||||||||||| || || ||||| ||||| ||| ||| ||||    
T  40659922 attcaatcaaagatttgggcgtcaacgttggagatccggaggccatggatattccggtcactttaatttcataatttatttctgtagccattatgccgtt 40659823  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgt 209  Q
    ||||||||||||||| | |||||||| ||||||||||  |||||| ||||| | |||| | ||| ||||||||||    
T  40659822 atatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagcggtgttgaatgatgt 40659748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 36234148 - 36234305
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||| |||||||||||||||||||||          |||||||||||||| | |||||||| ||||||| ||  |||||| |||    
T  36234148 tattccggtcactttaatttcatcatatatttttgtaggcat----------tatgctattaacttggatgttgtgagtttgttcacagattcatccttt 36234237  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| ||||||||    
T  36234238 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 36234305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 37614070 - 37614002
Alignment:
Q  81 gagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactt 149  Q
    |||||||||| ||||||||||||||||||||||||||||| |||| |||| |||||||| |||||||||    
T  37614070 gagtattccaatcactttaattttatcatatatttttgtatgcattatgttgttatatgttattaactt 37614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 84 - 166
Target Start/End: Original strand, 45128344 - 45128426
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgt 166  Q
    |||||| || |||||||||||||||||||||||||||| ||| |||| ||||||||||||||| || | |||||||| |||||    
T  45128344 tattccggtgactttaattttatcatatatttttgtagacattatgttgttatatgctattaatttggatgttgtgagtttgt 45128426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 114 - 251
Target Start/End: Complemental strand, 31580566 - 31580429
Alignment:
Q  114 ttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctc 213  Q
    |||||||||||| ||| ||||||||||||||||||| | || ||||| ||||||||||  |||||| ||||| | |||| | |||   ||||||||  ||    
T  31580566 ttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcatttacgtttttagcggtgtacaatgatgtaatc 31580467  T
Q  214 tattgatttgaacgaatgaatattattttatttttgtc 251  Q
    | | |||||||| |||||||||| ||||| ||||||||    
T  31580466 tctcgatttgaatgaatgaatatcattttgtttttgtc 31580429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 248
Target Start/End: Complemental strand, 40625998 - 40625834
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||  ||| ||||||||||||| || |  |||||||||||||||||   |||| ||| ||||||||||  |||||| |||    
T  40625998 tattccggtcactttaattttatgttatgtttttgtaggcattatctttttatatgctattaacttgaatgttatgagtttgttcgcagattcatcattt 40625899  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttattttt 248  Q
    || | |||| |  || ||||||||||  ||| | |||||||| | |||||||| ||||| |||||    
T  40625898 acgtttttagcgatgttgaatgatgtaatctctcgatttgaatggatgaatatcattttgttttt 40625834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 250
Target Start/End: Original strand, 24461598 - 24461746
Alignment:
Q  100 attttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtgg 199  Q
    |||| ||||||| |||||||||| ||  |||||||||||||||||||||||| |||||||| ||||||||||  |||||| ||||| | |||| |  ||     
T  24461598 atttcatcatat-tttttgtaggtattttgtcgttatatgctattaactttggtgttgtgagtttgttcgcaggttcatcctttacgtttttagcgatgt 24461696  T
Q  200 tgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    || || ||||  |||||  ||||||| ||||||||||  ||||||||||||    
T  24461697 tg-attatgtattctatcaatttgaatgaatgaatatcgttttatttttgt 24461746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 6173772 - 6173832
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctatt 144  Q
    |||||| || |||||||||||||||||||||||||||||||| |||  |||||||||||||    
T  6173772 tattccggtgactttaattttatcatatatttttgtaggcattatgcagttatatgctatt 6173832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 192
Target Start/End: Complemental strand, 41712730 - 41712622
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| |||| ||||||||||||||||||||||||||| || |||  |||||||| |||||||||   | |||||| ||||||||||  || ||| |||    
T  41712730 tattccggtcattttaattttatcatatatttttgtaggtattatgcagttatatgttattaacttatatattgtgagtttgttcgcagatttatcattt 41712631  T
Q  184 acatcttta 192  Q
    |||| ||||    
T  41712630 acattttta 41712622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 250
Target Start/End: Complemental strand, 3268749 - 3268610
Alignment:
Q  111 tatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgtt 210  Q
    ||||||||||||||| ||| | ||||||| ||||||||| | || ||||| |||||| |||  ||| || |||| || |||| | ||| |||||||| |     
T  3268749 tatttttgtaggcattatgcctttatatggtattaacttggatgctgtgagtttgtttgcagattcgtcatttatatttttagcggtgttgaatgatata 3268650  T
Q  211 ctctattgatttgaacgaatgaatattattttatttttgt 250  Q
     ||| | |||||||| |||||||||| |||||||||||||    
T  3268649 atctctcgatttgaatgaatgaatatcattttatttttgt 3268610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 22421868 - 22422035
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||| ||||||||||||||||||||| ||  |||   |||||||| |||||||| | || ||||| ||||||| ||  |||||| |||    
T  22421868 tattccggtcactttagttttatcatatatttttgtagacactatgctattatatgcaattaacttggatgctgtgagtttgttcacagattcatccttt 22421967  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||  |||||||  |  ||| | |||||||| |||||||||| ||||| ||||||||    
T  22421968 acgtttttagcggtattgaatgacataatctctcgatttgaatgaatgaatatcattttgtttttgtc 22422035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 39641848 - 39641766
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagatacgagtattccagtcactttaattttatcatatatttttg 118  Q
    |||||||| || |||||||||||||||||  |||||   ||  ||||||||| |||||||||| |||||||||||||||||||    
T  39641848 attcaatccaaaatttgggcatcaacgttgcagatccggaggcacgagtatttcagtcacttttattttatcatatatttttg 39641766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 3725328 - 3725381
Alignment:
Q  92 tcactttaattttatcatatatttttgtaggcataatgtcgttatatgctatta 145  Q
    ||||||||||||| |||||||||||||||||||| | | |||||||||||||||    
T  3725328 tcactttaattttttcatatatttttgtaggcattacgccgttatatgctatta 3725381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 185
Target Start/End: Original strand, 37994439 - 37994523
Alignment:
Q  100 attttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    |||||||||||| | |||||||||||  ||  |||||||||||||||||| | |||||||| ||||||||||  ||||||||||||    
T  37994439 attttatcatat-tatttgtaggcattttgctgttatatgctattaacttgggtgttgtgagtttgttcgcagattcatcttttac 37994523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 247
Target Start/End: Original strand, 13141676 - 13141787
Alignment:
Q  136 tatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaata 235  Q
    |||| ||||||||||| | |||||||||||||| |||||||||| |||| || ||||||| || ||| ||||||  ||| |  ||||||| ||| |||||    
T  13141676 tatgttattaactttgatattgtgaatttgttctcatcttcatcctttatatttttaacaatgttgattgatgtagtctgtcaatttgaatgaacgaata 13141775  T
Q  236 ttattttatttt 247  Q
    | ||||| ||||    
T  13141776 tcattttttttt 13141787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 29279521 - 29279439
Alignment:
Q  94 actttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttca 177  Q
    |||| ||||||||||||| | |||||||||||  || |||| ||||||||||||| || |||||||| ||||||||||| ||||    
T  29279521 acttaaattttatcatat-tatttgtaggcattttgccgttttatgctattaactatggtgttgtgagtttgttcgcatattca 29279439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 251
Target Start/End: Complemental strand, 33585679 - 33585527
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtg-- 198  Q
    ||||||||||| | |||||| ||||  || |||| |||||||||||||| | |||||||| ||||||||||| |||||| ||||| | ||||||  ||      
T  33585679 ttttatcatat-tatttgtatgcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcatcctttacgtttttaacgatgtt 33585581  T
Q  199 -gtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
     ||   |||||| ||||||||||||||| ||| ||||||  |||| ||||||||    
T  33585580 tgtatctgatgtactctattgatttgaatgaaagaatatcgttttgtttttgtc 33585527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 248
Target Start/End: Original strand, 28037296 - 28037389
Alignment:
Q  155 ttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttattttt 248  Q
    |||||| ||||||||||  |||||| ||||||| ||||||  || | |||||||| || ||| ||| |||| |||||||||| |||||||||||    
T  28037296 ttgtgagtttgttcgcaaattcatcatttacatttttaacgatgttaaatgatgtactatatcgatctgaatgaatgaatatcattttattttt 28037389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 113 - 250
Target Start/End: Complemental strand, 39641218 - 39641081
Alignment:
Q  113 tttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttct 212  Q
    ||||| ||||||| |||||||||||||| |||||||| | || ||||| ||||||||||  |||||  ||||| | ||||  | || |||||||||| ||    
T  39641218 tttttataggcattatgtcgttatatgcgattaacttggatgatgtgagtttgttcgcaaattcattctttacgtttttagtattgttgaatgatgtact 39641119  T
Q  213 ctattgatttgaacgaatgaatattattttatttttgt 250  Q
      || || ||||| ||||||||||  |||| |||||||    
T  39641118 tcatcgagttgaatgaatgaatatcgttttgtttttgt 39641081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 7646634 - 7646717
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    ||||||||||| | |||||||||||  || |||| |||||||||||||| | |||||||| ||||||||||  |||| |||||||    
T  7646634 ttttatcatat-tatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccttttac 7646717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 10237147 - 10237091
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||||||||||  ||||||| |||||||||||||| | |||||||| ||||||||||    
T  10237147 tttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgca 10237091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 251
Target Start/End: Original strand, 18763624 - 18763776
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttta---acagt 197  Q
    ||||||||||| | |||||||||||  || |||| |||||||||||||| | |||||||| ||||||||||  |||| | ||||| | ||||   | | |    
T  18763624 ttttatcatat-tatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatatt 18763722  T
Q  198 ggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
     ||   |||||| ||||||||||||||| ||||||||||  |||| ||||||||    
T  18763723 tgtatctgatgtactctattgatttgaatgaatgaatatcgttttgtttttgtc 18763776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 36692030 - 36692096
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttc 168  Q
    ||||||||||| | |||||||||||  || |||| |||||||||||||| |||||||||| |||||||    
T  36692030 ttttatcatat-tatttgtaggcattttgccgttttatgctattaacttggttgttgtgagtttgttc 36692096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 1421832 - 1421897
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgtt 167  Q
    ||||||||||| | |||||||||||  ||||||| |||||||||||||| | |||||||| ||||||    
T  1421832 ttttatcatat-tatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgtt 1421897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 12554125 - 12554056
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    ||||||||||| | |||||||||||  ||||||| |||| ||||||||| | |||||||| ||||||||||    
T  12554125 ttttatcatat-tatttgtaggcattttgtcgttgtatgatattaacttgggtgttgtgagtttgttcgca 12554056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 35220497 - 35220559
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttca 177  Q
    |||||||||||  ||||||| |||||||||||||| | || ||||| ||||||||||| ||||    
T  35220497 tttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcatattca 35220559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 209
Target Start/End: Original strand, 36323990 - 36324119
Alignment:
Q  81 gagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgt-tata-tgctattaactttgttgttgtgaatttgttcgcatcttcat 178  Q
    ||||||||||| || ||||||||||||||| || |||||| ||||  |||||| |||  ||| |||||||| | |||||||||||||||||| | |||||    
T  36323990 gagtattccagacattttaattttatcata-atatttgtatgcattttgtcgtgtatgctgcgattaacttggatgttgtgaatttgttcgcgtattcat 36324088  T
Q  179 cttttacatctttaacagtggtgaatgatgt 209  Q
    |  |||| | ||||||  || ||||||||||    
T  36324089 ccgttacgtttttaacgatgttgaatgatgt 36324119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 3269867 - 3269814
Alignment:
Q  111 tatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaattt 164  Q
    ||||||||||||||| ||||| ||||||| ||||||||| | || |||||||||    
T  3269867 tatttttgtaggcattatgtctttatatggtattaacttggatgctgtgaattt 3269814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 4904090 - 4904022
Alignment:
Q  100 attttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcg 169  Q
    |||||||||||| | ||||||| |||  ||||||| |||||||||||||| | |||||||| ||||||||    
T  4904090 attttatcatat-tatttgtagacattttgtcgttgtatgctattaacttggatgttgtgagtttgttcg 4904022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 8809461 - 8809518
Alignment:
Q  128 tgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    ||||||| |||||||||||||| | |||||||| ||||||||||  | ||||||||||    
T  8809461 tgtcgttgtatgctattaacttggatgttgtgagtttgttcgcagatccatcttttac 8809518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 33923887 - 33923944
Alignment:
Q  128 tgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    ||||||| |||||||||||||| | || ||||| ||||||||||| |||| |||||||    
T  33923887 tgtcgttttatgctattaacttgggtgctgtgagtttgttcgcatattcaccttttac 33923944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 185
Target Start/End: Complemental strand, 11985177 - 11985094
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    ||||||||||| | |||||||||||  ||  ||| ||| |||||||||| | |||||||||||||||||||  |||||| |||||    
T  11985177 ttttatcatat-tatttgtaggcattttgctgttgtatcctattaacttggatgttgtgaatttgttcgcaaattcatcatttac 11985094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 19028845 - 19028765
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaaca 195  Q
    |||||||||||  | ||||| ||||||||||||||   ||||||||  |||||||||  |||| ||||||||| |||||||    
T  19028845 tttgtaggcattttttcgttttatgctattaacttgagtgttgtgagattgttcgcaaattcaccttttacatttttaaca 19028765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 7e-40; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 4809107 - 4809274
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||| ||||||||||  |||||| |||    
T  4809107 tattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttagatgttgtgagtttgttcgcagattcatccttt 4809206  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||||||||||||    
T  4809207 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtc 4809274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 14906864 - 14906697
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| | |  ||||| ||||||||||  |||||| |||    
T  14906864 tattccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctattaacttggatcctgtgagtttgttcgcagattcatccttt 14906765  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| ||||||||    
T  14906764 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 14906697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 29777362 - 29777529
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| || |||||||| |||||||||||||||| |||||| ||||||||||||||||||||||| | || ||||| ||||||||||  |||||| |||    
T  29777362 tattccggtgactttaatattatcatatatttttggaggcattatgtcgttatatgctattaacttggatgctgtgagtttgttcgcagattcatccttt 29777461  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||||||||||||    
T  29777462 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtc 29777529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 84 - 250
Target Start/End: Original strand, 44578173 - 44578339
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | || ||| | |||| || ||  |||||| |||    
T  44578173 tattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtaagtttgatcacagattcatccttt 44578272  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
     | | |||||||||| ||||||||||  ||| | ||||||||  ||||||||| |||||||||||||    
T  44578273 gcgtttttaacagtgttgaatgatgtaatctctcgatttgaataaatgaatatcattttatttttgt 44578339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 94 - 250
Target Start/End: Complemental strand, 23851425 - 23851269
Alignment:
Q  94 actttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaa 193  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| | |||||||| ||||||||||  || ||||||||| | ||||     
T  23851425 actttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaacttagatgttgtgagtttgttcgcagatttatcttttacttttttag 23851326  T
Q  194 cagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
      ||| ||||||||||  ||| | |||||||| |||||| ||| ||||| |||||||    
T  23851325 tggtgttgaatgatgtaatctctcgatttgaatgaatgattatcattttgtttttgt 23851269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 9498540 - 9498373
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||| ||||||||||||||||||||| ||| | ||||||||||||||||| | || ||||| ||||||| ||  |||||| |||    
T  9498540 tattcctgtcactttaatttcatcatatatttttgtaggcattatgccattatatgctattaacttggatgctgtgagtttgttcacagattcatccttt 9498441  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  | | | |||||||| |||||||||| ||||||||||||||    
T  9498440 acgtttttagcggtgttgaatgatgtaatatctcgatttgaatgaatgaatatcattttatttttgtc 9498373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 36 - 251
Target Start/End: Complemental strand, 27747103 - 27746889
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagatacgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtta 135  Q
    |||||||||||||||||||||||||||||  |||||   |   | | ||||||| |||||||| |||| ||||||||||||||||||||| |||||||||    
T  27747103 attcaatcaaagatttgggcatcaacgttgtagatccggatgcatgggtattccggtcacttttattt-atcatatatttttgtaggcattatgtcgtta 27747005  T
Q  136 tatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaata 235  Q
    |||||||||||||| | |||||| ||||| || |||  |||||| ||||| | |||| | ||  ||||||||||  |  ||||||||||| |||||||||    
T  27747004 tatgctattaacttggatgttgtaaatttatttgcagattcatcatttacgtttttagcggtattgaatgatgtaattcattgatttgaatgaatgaata 27746905  T
Q  236 ttattttatttttgtc 251  Q
    |  |||| ||||||||    
T  27746904 tcgttttgtttttgtc 27746889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 81 - 236
Target Start/End: Original strand, 33342574 - 33342728
Alignment:
Q  81 gagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatct 180  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||   || ||||| ||||||||||  ||||||     
T  33342574 gagtattcaggtcactttaattttatcatatatatttgtaggcattatgccgttatatgctattaacttgaatgctgtgagtttgttcgcagattcatca 33342673  T
Q  181 tttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatat 236  Q
    ||||||| |||| | ||| ||||| ||||  |||||||||||||| ||||||||||    
T  33342674 tttacat-tttagcggtgttgaataatgtaatctattgatttgaatgaatgaatat 33342728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 93 - 251
Target Start/End: Complemental strand, 44099868 - 44099710
Alignment:
Q  93 cactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttta 192  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| | |||||||| |||||| |||  |||||| ||||| | ||||    
T  44099868 cactttaattttatcatatatttttgtatgcattatgtcgttatatgctattaacttggatgttgtgagtttgttagcagattcatcctttacgttttta 44099769  T
Q  193 acagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
     | ||| ||||||||||  ||| |  ||||||| |||| ||||| ||||| ||||||||    
T  44099768 gcggtgttgaatgatgtaatctctcaatttgaatgaataaatatcattttgtttttgtc 44099710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 33298994 - 33299099
Alignment:
Q  81 gagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatct 180  Q
    |||||||| |||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||| | |||||||| ||||||||||  ||||||     
T  33298994 gagtattctagtcactttaattttatcatatatttttataggcattatgccgttatatgctattaacttagatgttgtgagtttgttcgcagattcatca 33299093  T
Q  181 tttaca 186  Q
    ||||||    
T  33299094 tttaca 33299099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 83 - 250
Target Start/End: Complemental strand, 39153085 - 39152917
Alignment:
Q  83 gtattccagtcactttaattttatcatatattttt-gtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctt 181  Q
    |||||||  |||||||||||||||||||||||||| |||||||| |||| ||||| |||||||||||| | ||||  || ||||||||||  |||||| |    
T  39153085 gtattccgatcactttaattttatcatatattttttgtaggcattatgttgttatgtgctattaacttagatgttaagagtttgttcgcagattcatcct 39152986  T
Q  182 ttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    |||| | |||| ||||| ||||| |||| || ||| |||||||| ||||||||||  ||||||||||||    
T  39152985 ttacgtttttagcagtgttgaataatgtactttatcgatttgaatgaatgaatatcgttttatttttgt 39152917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 95 - 242
Target Start/End: Original strand, 11267162 - 11267309
Alignment:
Q  95 ctttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaac 194  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | || ||||| ||||||||||  |||||| ||||| | |||| |    
T  11267162 ctttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagtttcatcctttacgtttttagc 11267261  T
Q  195 agtggtgaatgatgttctctattgatttgaacgaatgaatattatttt 242  Q
     |||  |||||||||  ||| | |||||||| |||||||||| |||||    
T  11267262 ggtgtcgaatgatgtaatctctcgatttgaatgaatgaatatcatttt 11267309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 33896249 - 33896396
Alignment:
Q  104 tatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaa 203  Q
    |||||||||||||||||||||| |||  |||||||||||||||||| | |||||||| ||| ||||||  |||||| ||||||| |||| | ||| ||||    
T  33896249 tatcatatatttttgtaggcattatgctgttatatgctattaacttggatgttgtgagttttttcgcagattcatcctttacatttttagcggtgttgaa 33896348  T
Q  204 tgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    ||||||  ||| | |||||||| |||| ||||| ||||||||||||||    
T  33896349 tgatgtaatctctcgatttgaatgaataaatatcattttatttttgtc 33896396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 34611947 - 34612114
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||||||| || | |||||||||||||||||| | |||||||| ||||||||||  |||||  |||    
T  34611947 tattccggtcactttaattttatcatatatttttgtaggcattatcttgttatatgctattaacttggatgttgtgagtttgttcgcagattcattcttt 34612046  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | ||||    || | ||||||||  ||| | ||||| || |||||||||| ||||||||||||||    
T  34612047 acgtttttagtgatgttcaatgatgtaatctctcgattttaatgaatgaatatcattttatttttgtc 34612114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 36 - 178
Target Start/End: Complemental strand, 42448017 - 42447874
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||||| ||||||||  |||||   ||   | || |||||||| ||||||||||||||||||||||||||||||||| ||| ||||    
T  42448017 attcaatcaaagatttgggcgtcaacgttgcagatccgaaggccatgaatattccagacactttaattttatcatatatttttgtaggcattatgccgtt 42447918  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgcatcttcat 178  Q
    ||||||||||||||| | |||||||| ||||||| ||| |||||    
T  42447917 atatgctattaacttggatgttgtgagtttgttcacatattcat 42447874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 84 - 250
Target Start/End: Complemental strand, 9619298 - 9619132
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||| |||||||||||||||| | || ||| ||||||||||||||||||| | || ||||| ||||||||||  |||||| |||    
T  9619298 tattccggtcactttaatttcatcatatatttttgtaagtattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatccttt 9619199  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    || | |||| | ||| ||||||||||  | | |  ||||||| |||||||||| |||||||||||||    
T  9619198 acgtttttagcggtgttgaatgatgtaatatctcaatttgaatgaatgaatataattttatttttgt 9619132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 84 - 248
Target Start/End: Complemental strand, 32724422 - 32724258
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||| | |||||||| |||||||| |  || ||| |||    
T  32724422 tattccggtcactttaatcttatcttatatttttgtaggcattatgtcgttatatactattaacttggatgttgtgagtttgttcgtagatttatccttt 32724323  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttattttt 248  Q
    || | |||| | ||| ||||||||||  ||| | ||||  || |||||||||| |||||||||||    
T  32724322 acgtttttagcggtgttgaatgatgtaatctctcgattcaaatgaatgaatataattttattttt 32724258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 91 - 242
Target Start/End: Original strand, 11725830 - 11725981
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctt 190  Q
    ||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| | || ||||| ||||||| ||  |||||| ||||| | ||    
T  11725830 gtcactttagttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcacagattcatcctttacgtttt 11725929  T
Q  191 taacagtggtgaatgatgttctctattgatttgaacgaatgaatattatttt 242  Q
    || | ||| ||||||||||  ||| |  ||||||| |||||||||| |||||    
T  11725930 tagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatatcatttt 11725981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 37565820 - 37565653
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| |||||||| |||||||||||||||||||||||||| |||  |||||||||||||||||| | || ||||| ||||||||||  |||||| |||    
T  37565820 tattccggtcactttgattttatcatatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttgttcgcaaattcatccttt 37565721  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | ||||   ||| ||||||||||  ||| | |||||| | |||||||||| |||| |||| ||||    
T  37565720 acgtttttagtggtgttgaatgatgtaatctctcgatttgcatgaatgaatatcatttcatttatgtc 37565653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 2656013 - 2656163
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||| ||||||||||||||||||||| |||  |||||||||||||||||| | || ||||| ||||||||||  |||||| |||    
T  2656013 tattccggtcactttaatttcatcatatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttgttcgcaaattcatcattt 2656112  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaat 234  Q
    || | |||| | ||| ||||||||||  ||| | ||||| || ||||||||    
T  2656113 acgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaat 2656163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 84 - 250
Target Start/End: Complemental strand, 43890065 - 43889899
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| | || ||||| |||||| |||  |||||| |||    
T  43890065 tattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgattttgtttgcagattcatccttt 43889966  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    || | |||| || || ||||| ||||  ||| |  |||| || |||||||||| ||||| |||||||    
T  43889965 acgtttttagcattgttgaataatgtaatctctcaatttaaatgaatgaatatcattttgtttttgt 43889899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 251
Target Start/End: Original strand, 9072871 - 9073028
Alignment:
Q  94 actttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaa 193  Q
    ||||||||||||||||||||||||||| |||| ||  ||||||||||||||||||| | || ||||| |||| || ||  |||||  ||||| | ||||     
T  9072871 actttaattttatcatatatttttgtatgcattattccgttatatgctattaacttggatgctgtgagtttgctcacagattcattctttacgtttttag 9072970  T
Q  194 cagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    | ||| ||||||||||  ||| | |||||||| |||||||||| ||||||||||||||    
T  9072971 cggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtc 9073028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 209
Target Start/End: Original strand, 11464314 - 11464439
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| | || ||||| |||||||| |  |||||| |||    
T  11464314 tattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgtagattcatccttt 11464413  T
Q  184 acatctttaacagtggtgaatgatgt 209  Q
    || | |||| | ||| ||||||||||    
T  11464414 acgtttttagcggtgttgaatgatgt 11464439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 98 - 247
Target Start/End: Original strand, 16794448 - 16794597
Alignment:
Q  98 taattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagt 197  Q
    |||||||||||||||||||||||| ||| ||| ||||||||| ||||||||| | |||||||| ||||||||||  |||||| |||||   |||| | ||    
T  16794448 taattttatcatatatttttgtagacattatgacgttatatggtattaacttggatgttgtgagtttgttcgcagattcatcctttactattttatcggt 16794547  T
Q  198 ggtgaatgatgttctctattgatttgaacgaatgaatattattttatttt 247  Q
      ||||||||||  | ||| |||||||| ||||||||||| ||| |||||    
T  16794548 cttgaatgatgtaatatatcgatttgaatgaatgaatattttttgatttt 16794597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 15047045 - 15047136
Alignment:
Q  94 actttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||   |||||| | ||||||||||  ||||||||||||    
T  15047045 actttaattttatcatatatttttgtaggcattataccgttatatgctattaacttgaatgttgtaagtttgttcgcagattcatcttttac 15047136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 83 - 250
Target Start/End: Original strand, 28239983 - 28240150
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttt 182  Q
    ||||||| ||||||||||||||||||| |||||||||| |||| ||| |||||||| |||||||||| | || ||||| ||||||| ||  |||||| ||    
T  28239983 gtattccggtcactttaattttatcatttatttttgtaagcattatgccgttatattctattaacttagatgctgtgagtttgttcacagattcatcctt 28240082  T
Q  183 tacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    ||| | |||| |  || ||||||| ||   |||| |||||||| |||||||||| | ||| |||||||    
T  28240083 tacgtttttagcgatgttgaatgacgtaacctatcgatttgaatgaatgaatatcagtttgtttttgt 28240150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 91 - 185
Target Start/End: Complemental strand, 43135513 - 43135419
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    |||||||||||||||||||||||||| |||||||| ||| ||||||||| ||||||||| | |||||||| | ||||||||  |||||| |||||    
T  43135513 gtcactttaattttatcatatattttcgtaggcattatgccgttatatgttattaacttggatgttgtgagtatgttcgcaaattcatcatttac 43135419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 209
Target Start/End: Complemental strand, 43192280 - 43192163
Alignment:
Q  92 tcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttt 191  Q
    |||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||| | |||| ||| ||||||||||  |||||| ||||  | |||    
T  43192280 tcactttaattttatcatatatttttgtatccattatgccgttatatgctattaacttggatgttctgagtttgttcgcagattcatcctttatgttttt 43192181  T
Q  192 aacagtggtgaatgatgt 209  Q
    | | ||| ||||||||||    
T  43192180 agcggtgttgaatgatgt 43192163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 92 - 250
Target Start/End: Original strand, 11197034 - 11197187
Alignment:
Q  92 tcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttt 191  Q
    ||||||||||||||| |||||||||||||||||| |||  |||||||||||||||||| | || ||||| ||||||  ||  || ||| ||||| | |||    
T  11197034 tcactttaattttattatatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttgtttacagatttatcatttacgttttt 11197133  T
Q  192 aacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    |||| || ||||||||||  ||||     | ||| |||||||||| |||||||||||||    
T  11197134 aacaatgttgaatgatgtaatcta-----tggaatgaatgaatataattttatttttgt 11197187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 35580599 - 35580661
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaa 146  Q
    |||||| ||||||||| ||||||||||||||||||||||||| ||| | ||||| ||||||||    
T  35580599 tattccggtcactttagttttatcatatatttttgtaggcattatgccattatacgctattaa 35580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 100 - 194
Target Start/End: Complemental strand, 45445753 - 45445660
Alignment:
Q  100 attttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaac 194  Q
    |||||||||||| | |||||||||||  ||| ||| |||||||||||||| | |||||||| ||||||||||| |||| ||||||| | ||||||    
T  45445753 attttatcatat-tatttgtaggcattttgttgttttatgctattaacttggatgttgtgagtttgttcgcatattcaccttttacgtttttaac 45445660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 15597102 - 15597045
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaact 148  Q
    |||||||||||||| ||||||| ||||||| |||| |||||| |||||||||||||||    
T  15597102 gtcactttaattttctcatatacttttgtatgcattatgtcgatatatgctattaact 15597045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 100 - 192
Target Start/End: Complemental strand, 27110407 - 27110316
Alignment:
Q  100 attttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttta 192  Q
    |||||||||||| | ||||||| |||  | ||||| |||||||||||||| | |||||||| ||||||||||| |||||||||| ||| ||||    
T  27110407 attttatcatat-tatttgtagacattttatcgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcatcttttgcattttta 27110316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 23230791 - 23230860
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    ||||||||||| | |||||||||||  ||||||| |||||||||||||| | |||||||| ||||||||||    
T  23230791 ttttatcatat-tatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgca 23230860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 125
Target Start/End: Original strand, 19876353 - 19876394
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcat 125  Q
    |||||| ||||||||||||| |||||||||||||||||||||    
T  19876353 tattccggtcactttaatttgatcatatatttttgtaggcat 19876394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 171
Target Start/End: Complemental strand, 31013567 - 31013480
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    ||||| |||| |||| | ||||||||||| | |||||||||||  || |||| |||||||||||||| | |||||||| ||||||||||    
T  31013567 gtatttcagtgacttaagttttatcatat-tatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgca 31013480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 41896678 - 41896734
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||||||||||  ||||||| |||||||||||||| | |||||||| ||||||||||    
T  41896678 tttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgca 41896734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 18890641 - 18890571
Alignment:
Q  100 attttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||||||||||| | |||||||||||  ||||||| |||||||||||||| | || ||||| ||||||||||    
T  18890641 attttatcatat-tatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgca 18890571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 251
Target Start/End: Complemental strand, 27498202 - 27498155
Alignment:
Q  204 tgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    |||||| ||||||  ||||||| |||||||||||||||||||||||||    
T  27498202 tgatgtactctatcaatttgaatgaatgaatattattttatttttgtc 27498155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 15344469 - 15344539
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    |||||||||||  ||||||| |||||||||||||| | || ||||| ||||||||||  |||||| |||||    
T  15344469 tttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttac 15344539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 15433534 - 15433604
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    |||||||||||  ||||||| |||||||||||||| | || ||||| ||||||||||  |||||| |||||    
T  15433534 tttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttac 15433604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 15524838 - 15524908
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    |||||||||||  ||||||| |||||||||||||| | || ||||| ||||||||||  |||||| |||||    
T  15524838 tttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttac 15524908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 193
Target Start/End: Original strand, 37971444 - 37971522
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaa 193  Q
    |||||||||||  || |||| |||||||||||||| | |||||||| ||||||||||  |||| | ||||||| |||||    
T  37971444 tttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacatttttaa 37971522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 17949385 - 17949434
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgcta 142  Q
    ||||||||||||||||||||||  ||||||||||| |||  |||||||||||    
T  17949385 gtcactttaattttatcatata--tttgtaggcattatgctgttatatgcta 17949434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 30568249 - 30568193
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||||||||||  || |||| |||||||||||||| | |||||||| ||||||||||    
T  30568249 tttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcgca 30568193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 7e-40; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 25162569 - 25162736
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||| |||||||||   |||||| |||    
T  25162569 tattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcggattcatccttt 25162668  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| ||||||||    
T  25162669 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 25162736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 25631467 - 25631300
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| | || ||||| ||||||||||  |||||| |||    
T  25631467 tattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgatgtgagtttgttcgcagattcatccttt 25631368  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    |||| |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||||||||||||    
T  25631367 acatttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtc 25631300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 36906255 - 36906422
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| | || ||||| ||||||||||  |||||| |||    
T  36906255 tattccagtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcagattcatccttt 36906354  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||||||||||||    
T  36906355 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtc 36906422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 84 - 250
Target Start/End: Original strand, 29503594 - 29503760
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | |  ||||| | ||||||||| |||||| |||    
T  29503594 tattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggattctgtgagtatgttcgcatattcatccttt 29503693  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    |||| |||| | ||| ||||| ||||  |||||||||||||| |||||||||| ||||| |||||||    
T  29503694 acatttttagcggtgttgaataatgtaatctattgatttgaatgaatgaatatcattttgtttttgt 29503760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 12116231 - 12116398
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    ||||| |||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||| |||||||  |  |||||| |||    
T  12116231 tattctagtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcttagattcatccttt 12116330  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| |  || ||||||||||  ||| | |||||||| |||||||||| ||||||||||||||    
T  12116331 acgtttttagcgatgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtc 12116398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 79 - 250
Target Start/End: Complemental strand, 44907345 - 44907174
Alignment:
Q  79 acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcat 178  Q
    |||| |||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| || | |||||||| ||||||||||  |||||    
T  44907345 acgaatattccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaatttggatgttgtgagtttgttcgcagattcat 44907246  T
Q  179 cttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    | ||||| | |||| |  || ||||||||||  | | | |||||||| |||||||||| ||||| |||||||    
T  44907245 cctttacgtttttagcgttgttgaatgatgtaatatctcgatttgaatgaatgaatatcattttgtttttgt 44907174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 36 - 250
Target Start/End: Original strand, 46178653 - 46178867
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagatacgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtta 135  Q
    ||||||||||||| |||||| ||||||||  |||||   ||  | | ||||||| |||||||| ||||||||||||||||||||| |||| |||||||||    
T  46178653 attcaatcaaagaattgggcgtcaacgttgcagatccggaggcatgggtattccggtcacttttattttatcatatatttttgtaagcattatgtcgtta 46178752  T
Q  136 tatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaata 235  Q
    |||||||||||||| | || ||||| ||||||||||  || ||||||||| | |||||| ||| |||||||| |  | ||| |||||||| ||||||| |    
T  46178753 tatgctattaacttggatgatgtgagtttgttcgcagttttatcttttacgtttttaacggtgttgaatgatataatatatcgatttgaatgaatgaaaa 46178852  T
Q  236 ttattttatttttgt 250  Q
    |  |||| |||||||    
T  46178853 tcgttttgtttttgt 46178867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 84 - 250
Target Start/End: Original strand, 46934775 - 46934938
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| |||||||||||||||||||||||||||||||||   ||||||||||||||||||||||| | |||||||| |||||||| |  |||||| |||    
T  46934775 tattccggtcactttaattttatcatatatttttgtaggc---atgtcgttatatgctattaacttggatgttgtgagtttgttcgtagattcatccttt 46934871  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    || | |||| |  || |||||||||   ||| | |||||||| |||||||||| |||||||||||||    
T  46934872 acgtttttagcgatgttgaatgatgcaatctctcgatttgaatgaatgaatatcattttatttttgt 46934938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 84 - 250
Target Start/End: Complemental strand, 3848860 - 3848694
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| || |||||||||||||||||||| ||||||||||| ||| || |||||||||||||||| | || ||||| ||||||||||  |||||| |||    
T  3848860 tattccggtgactttaattttatcatatatatttgtaggcattatgccgctatatgctattaacttggatgctgtgagtttgttcgcagattcatccttt 3848761  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| ||||||||||  ||||||||||||    
T  3848760 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatctttttatttttgt 3848694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 92 - 250
Target Start/End: Original strand, 32607610 - 32607768
Alignment:
Q  92 tcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttt 191  Q
    |||||||||||| ||||||||||||||||||||| ||| | ||||||||||||||| | | |||||||| ||||||||||  |||||| ||||| | |||    
T  32607610 tcactttaatttcatcatatatttttgtaggcattatgccattatatgctattaacctggatgttgtgagtttgttcgcagattcatcctttacgttttt 32607709  T
Q  192 aacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    | | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| |||||||    
T  32607710 agcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 32607768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 36 - 251
Target Start/End: Original strand, 17237889 - 17238105
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctataga-tacgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||||| ||||||||  |||||   ||  || |  |||||| |||||||||||||||| |||||||||||||||||| ||||||||    
T  17237889 attcaatcaaagatttgggcgtcaacgttgcagatccggaggctatggatattccggtcactttaattttattatatatttttgtaggcattatgtcgtt 17237988  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaat 234  Q
    ||||||||||||||| | || ||||| |||||||||   ||| || ||||| | |||| | ||| ||||||||||  | | |  ||||||| ||||||||    
T  17237989 atatgctattaacttggatgatgtgagtttgttcgctgattcttcctttacgtttttagcggtgttgaatgatgtaatatctcaatttgaatgaatgaat 17238088  T
Q  235 attattttatttttgtc 251  Q
    || ||||| ||||||||    
T  17238089 atcattttgtttttgtc 17238105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 94 - 250
Target Start/End: Complemental strand, 30648650 - 30648494
Alignment:
Q  94 actttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaa 193  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||| | |||||||| ||||||||||  |||||| ||||  | ||||     
T  30648650 actttaattttatcatatatttttataggcaatatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttatgtttttag 30648551  T
Q  194 cagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    | ||| ||||| ||||  ||| | |||||||| |||||||||||| |||| ||||||    
T  30648550 cggtgttgaattatgtaatctctcgatttgaatgaatgaatattagtttaattttgt 30648494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 84 - 242
Target Start/End: Complemental strand, 49552165 - 49552007
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| || |||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| | || ||| | ||||||||||  |||||| |||    
T  49552165 tattccggtgactttagttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtaagtttgttcgcagattcatccttt 49552066  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattatttt 242  Q
    || | |||| ||||| ||||||||||  | |  ||||||||| |||||||||| |||||    
T  49552065 acgtttttagcagtgttgaatgatgtaattttatgatttgaatgaatgaatatcatttt 49552007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 40 - 149
Target Start/End: Complemental strand, 36734678 - 36734569
Alignment:
Q  40 aatcaaagatttgggcatcaacgtttgagatctatagatacgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatg 139  Q
    |||||||||||||||| ||||||||  ||||||  ||  | ||||||| | || |||||||||||||||||||||||||||||||| |||||||||||||    
T  36734678 aatcaaagatttgggcgtcaacgttgcagatctggaggcatgagtatttcggttactttaattttatcatatatttttgtaggcattatgtcgttatatg 36734579  T
Q  140 ctattaactt 149  Q
    ||||||||||    
T  36734578 ctattaactt 36734569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 39917339 - 39917238
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| | |||||||| ||| ||| ||  |||||| |||    
T  39917339 tattccagtcactttaattttatcatatatttttgtaggcattatgcctttatatgctattaacttggatgttgtgagtttattcacagattcatccttt 39917240  T
Q  184 ac 185  Q
    ||    
T  39917239 ac 39917238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 83 - 251
Target Start/End: Original strand, 22803162 - 22803330
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttt 182  Q
    |||||||  |||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||| | || ||||| ||||||| ||  || ||| ||    
T  22803162 gtattccgatcactttaattttatcatgtatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcacaaatttatcctt 22803261  T
Q  183 tacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    ||| | |||| |  || ||||||||||   |||| ||||| || |||||||||| | ||||||||||||    
T  22803262 tacgtttttagcgatgttgaatgatgtaacctatcgatttaaatgaatgaatatcaatttatttttgtc 22803330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 25849942 - 25850038
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatct 180  Q
    ||||||||||||||||| |||||  |||||||||||| |||| |||||||||||| |||||||||| | |||||||| ||||||||||| |||||||    
T  25849942 tattccagtcactttaactttattgtatatttttgtaagcattatgtcgttatatactattaacttgggtgttgtgagtttgttcgcatattcatct 25850038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 92 - 251
Target Start/End: Complemental strand, 35499131 - 35498974
Alignment:
Q  92 tcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttt 191  Q
    |||||||||||| |||||||||||||||  |||| |||||||||||||||||||| || | |||||| | ||| ||||||  |||||| ||||| | |||    
T  35499131 tcactttaatttcatcatatatttttgt--gcattatgtcgttatatgctattaatttggatgttgtaagttttttcgcagattcatcctttacgttttt 35499034  T
Q  192 aacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    | | ||| ||||||||||  ||  | |||||||| |||||||||| ||||||||||||||    
T  35499033 agcggtgttgaatgatgtaatccctcgatttgaatgaatgaatatcattttatttttgtc 35498974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 4178698 - 4178865
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||| ||||||| |||  |||||||||||||||||| | || ||    |||||||  |  |||||| |||    
T  4178698 tattccggtcactttaattttatcatatatttttctaggcattatgctgttatatgctattaacttggatgatgcatgtttgttcatagattcatccttt 4178797  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| ||||| ||||||||||  ||| | |||||||| |||||||||| ||||| ||||||||    
T  4178798 acgtttttagcagtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 4178865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 38854977 - 38854813
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| | ||||||||||||||||||||||||||||| ||| ||  ||||||||| ||||||||| | || ||||| ||| ||||||| |||||| |||    
T  38854977 tattccgggcactttaattttatcatatatttttgtagtcattataccgttatatgttattaacttggatgatgtgagttttttcgcatattcatccttt 38854878  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||   || ||||||||| ||  ||| | |||||||| |||||||||| ||||| ||||||||    
T  38854877 acgttttt---agcggtgaatgacgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 38854813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 42719650 - 42719715
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactt 149  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  42719650 tattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgccattaactt 42719715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 14464645 - 14464765
Alignment:
Q  86 ttccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    ||||||||||||||||||| |||||||||||||||||||| |||  ||||||| |||||||||| | |||| ||| ||||||||||  ||||||  ||||    
T  14464645 ttccagtcactttaattttgtcatatatttttgtaggcattatgctgttatatactattaacttggatgttctgagtttgttcgcagattcatccgttac 14464744  T
Q  186 atctttaacagtggtgaatga 206  Q
     | |||||| ||| |||||||    
T  14464745 gtttttaacggtgttgaatga 14464765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 37169361 - 37169512
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttt 182  Q
    |||||||| ||| |||||||| ||||||||||||||||||||| |||  ||||||||||||||||||    ||||||| ||| |||||   |||||| ||    
T  37169361 gtattccaatcattttaatttgatcatatatttttgtaggcattatgctgttatatgctattaacttgaaggttgtgagtttcttcgcggattcatcctt 37169460  T
Q  183 tacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaat 234  Q
    ||| | |||| | ||| ||||||||||  |||||||||||||| ||| ||||    
T  37169461 tacgtttttagcggtgttgaatgatgtaatctattgatttgaatgaaagaat 37169512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 31794155 - 31794267
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagatacgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtta 135  Q
    |||||||||||||||||||||||||||||  ||||    ||  | ||||||||| |||| ||||||||||||||||| | |||||||||| | |||||||    
T  31794155 attcaatcaaagatttgggcatcaacgttgcagattcggaggcatgagtattccggtcagtttaattttatcatatactgttgtaggcat-acgtcgtta 31794253  T
Q  136 tatgctattaactt 149  Q
    ||||||||||||||    
T  31794254 tatgctattaactt 31794267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 251
Target Start/End: Original strand, 21488175 - 21488393
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagat---acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcg 132  Q
    |||||||||||||||||||| ||||||||  ||||||  ||     | ||| |||| |||||||||||||||||||||||||||||||||||| ||        
T  21488175 attcaatcaaagatttgggcgtcaacgttgtagatctggaggaggcatgagcattctagtcactttaattttatcatatatttttgtaggcattatactc 21488274  T
Q  133 ttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatga 232  Q
    |||||||||||||||||   |  ||||| ||| ||||||  |||||| || | || ||||    || | |||||| | |||||||||||||||  |||||    
T  21488275 ttatatgctattaacttgaatactgtgagtttattcgcagattcatccttaaaatttttagtgatgttaaatgatatactctattgatttgaataaatga 21488374  T
Q  233 atattattttatttttgtc 251  Q
    |||| ||||||||||||||    
T  21488375 atatcattttatttttgtc 21488393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 250
Target Start/End: Complemental strand, 50611352 - 50611193
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctt 190  Q
    ||||||| ||||||||||||| ||||||||||||| ||   |||||||||||||||||| | || | ||  ||||||||||  |||||| ||||| | ||    
T  50611352 gtcacttaaattttatcatatgtttttgtaggcattatacagttatatgctattaacttggatgatatgggtttgttcgcagattcatcctttacgtttt 50611253  T
Q  191 taacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    || | ||| ||||||||||  | | | |||||||| |||||||||| ||||| |||||||    
T  50611252 tagcggtgttgaatgatgtaatatctcgatttgaatgaatgaatatcattttgtttttgt 50611193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 209
Target Start/End: Original strand, 21916613 - 21916731
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctt 190  Q
    |||||||||||||||||||||||||||||||  || ||| |  | |||||||||||||| | || ||||| ||||||| ||  |||||| ||||||| ||    
T  21916613 gtcactttaattttatcatatatttttgtagatattatgcccctgtatgctattaacttggatgatgtgagtttgttctcagattcatcctttacatttt 21916712  T
Q  191 taacagtggtgaatgatgt 209  Q
    || | ||| ||||||||||    
T  21916713 tagcggtgttgaatgatgt 21916731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 119 - 248
Target Start/End: Complemental strand, 38440497 - 38440368
Alignment:
Q  119 taggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattg 218  Q
    ||||||| |||  |||||||||||||||||| | || ||||| |||| |||||  |||||| ||||| | |||| | ||| ||||||||||  ||| | |    
T  38440497 taggcattatgctgttatatgctattaacttggatgctgtgagtttgctcgcagattcatcctttacgtttttagcggtgttgaatgatgtaatctttcg 38440398  T
Q  219 atttgaacgaatgaatattattttattttt 248  Q
    ||||||| |||||||||| |||||||||||    
T  38440397 atttgaatgaatgaatatcattttattttt 38440368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 51202188 - 51202144
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgtta 135  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  51202188 gtcactttaattttatcatatatttttgtaggcattatgtcgtta 51202144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 125
Target Start/End: Original strand, 2342596 - 2342637
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcat 125  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  2342596 tattccggtcactttaattttatcatatatttttgtaggcat 2342637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 50194267 - 50194195
Alignment:
Q  113 tttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    |||||||||||||  || ||||||||||||||||||| | |||||||| ||||||||||  |||||| |||||    
T  50194267 tttttgtaggcattttgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttac 50194195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 250
Target Start/End: Original strand, 35175562 - 35175699
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtga--atgatgttct 212  Q
    |||||||||||  |||| || ||||||||||||||   |||||||| ||||||||||  |||||||||||| | |||| |  || |||  |||||||  |    
T  35175562 tttgtaggcattttgtcattgtatgctattaacttgagtgttgtgagtttgttcgcagattcatcttttacgtttttagcgatgttgattatgatgtatt 35175661  T
Q  213 ctattgatttgaacgaatgaatattattttatttttgt 250  Q
    ||||  ||||||| ||||||||||  ||||||||||||    
T  35175662 ctatcaatttgaatgaatgaatatcgttttatttttgt 35175699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 12946911 - 12946843
Alignment:
Q  100 attttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcg 169  Q
    |||| ||||||| |||||||||||||  || | ||||||||||||||||| | |||||||||||||||||    
T  12946911 atttcatcatat-tttttgtaggcattttgcccttatatgctattaacttgggtgttgtgaatttgttcg 12946843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 249
Target Start/End: Complemental strand, 48650677 - 48650527
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttta---acagt 197  Q
    ||||||||||| | |||||||||||  || |||| |||||||||||||| | |||||||| ||||||||||  |||| | ||||||| ||||   | | |    
T  48650677 ttttatcatat-tatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacatttttagcgatatt 48650579  T
Q  198 ggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttg 249  Q
     ||   |||||| |||||| |||||||| |||||||||| ||||| ||||||    
T  48650578 tgtatctgatgtactctatcgatttgaatgaatgaatatcattttgtttttg 48650527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 4821946 - 4822020
Alignment:
Q  96 tttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||||||| ||||||| |||||||||||||  ||  |||||||||||||||||| | || ||||| ||||||||||    
T  4821946 tttaatttcatcatat-tttttgtaggcattttgctgttatatgctattaacttgggtgatgtgagtttgttcgca 4822020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 33580025 - 33580094
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    ||||||||||| | |||||||||||  || |||| |||||||||||||| | |||||||| ||||||||||    
T  33580025 ttttatcatat-tatttgtaggcattttgccgttttatgctattaacttgggtgttgtgattttgttcgca 33580094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 38860055 - 38859986
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    ||||||||||| | |||||||||||  || |||| |||||||||||||| | |||||||| ||||||||||    
T  38860055 ttttatcatat-tatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgca 38859986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 40487470 - 40487539
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    ||||||||||| | |||||||||||  || ||||||||| ||||||||| | |||||||| ||||||||||    
T  40487470 ttttatcatat-tatttgtaggcattttgccgttatatgttattaacttgggtgttgtgagtttgttcgca 40487539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 51923885 - 51923942
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcat 172  Q
    |||||||||||  || |||| |||||||||||||| | |||||||| |||||||||||    
T  51923885 tttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcat 51923942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 6910654 - 6910622
Alignment:
Q  83 gtattccagtcactttaattttatcatatattt 115  Q
    |||||||||||| ||||||||||||||||||||    
T  6910654 gtattccagtcaatttaattttatcatatattt 6910622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 51303573 - 51303517
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||||||||||  || |||| |||||||||||||| | |||||||| ||||||||||    
T  51303573 tttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgca 51303517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 3e-39; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 93 - 251
Target Start/End: Original strand, 25064381 - 25064539
Alignment:
Q  93 cactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttta 192  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| | |||||||| ||||||||||  |||||| ||||| | ||||    
T  25064381 cactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgttttta 25064480  T
Q  193 acagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
     | ||| ||||||||||  ||| | |||||||| |||||||||| ||||||||||||||    
T  25064481 gcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtc 25064539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 17237227 - 17237060
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||| | ||||||||  |||||| |||    
T  17237227 tattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtgtgttcgcagattcatccttt 17237128  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| || |||||    
T  17237127 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgttgttgtc 17237060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 84 - 247
Target Start/End: Original strand, 17334889 - 17335052
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||| ||||||||||  |||||| |||    
T  17334889 tattccagtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcattt 17334988  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttt 247  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| ||||    
T  17334989 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatgattttttttt 17335052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 36 - 250
Target Start/End: Original strand, 35001677 - 35001892
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||| | ||||||||  |||||   || | | || |||||| || |||||||||||||||||||||||||||||||| ||| ||||    
T  35001677 attcaatcaaagatttggacgtcaacgttgcagatccgaaggtcatgaatattccggtgactttaattttatcatatatttttgtaggcattatgccgtt 35001776  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaat 234  Q
    ||||||||||||||| | |||||||| ||||||||||  || ||| ||||| | |||| |  || ||||||||||  ||| |||||||||| ||||||||    
T  35001777 atatgctattaacttggatgttgtgagtttgttcgcagattaatcctttacgtttttagcgatgttgaatgatgtaatcttttgatttgaatgaatgaat 35001876  T
Q  235 attattttatttttgt 250  Q
    || |||||||||||||    
T  35001877 atcattttatttttgt 35001892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 84 - 250
Target Start/End: Complemental strand, 12059714 - 12059548
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||| | |||||||| ||||||||||  |||||| |||    
T  12059714 tattccggtcactttaattttatcatatttttttgtaggaattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttt 12059615  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    || | |||| | ||| |||||||| |  ||| ||||||| || |||||||||| |||||||||||||    
T  12059614 acgtttttagcggtgttgaatgatataatctcttgatttaaatgaatgaatatcattttatttttgt 12059548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 36 - 251
Target Start/End: Complemental strand, 4984557 - 4984341
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||||||||||||||  ||||    || | | |  ||||||  |||||||||||||||||||||||||||||||||| |||| |||    
T  4984557 attcaatcaaagatttgggcatcaacgttgcagattcggaggtcatggatattccgatcactttaattttatcatatatttttgtaggcattatgttgtt 4984458  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaat 234  Q
    ||||||||||||||| | || ||| | ||||||||||  |||||| ||||| | |||| | ||| ||||||||||  ||| | |||||||| ||||||||    
T  4984457 atatgctattaacttagatgatgtaagtttgttcgcagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaat 4984358  T
Q  235 attattttatttttgtc 251  Q
    || ||||||||||||||    
T  4984357 atcattttatttttgtc 4984341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 8028059 - 8027892
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||| || ||||| ||||||||||  |||||| |||    
T  8028059 tattccagtcactttaattttatcatatatttttgtaggcattatgccattatatgctattaactttgatgatgtgagtttgttcgcaaattcatccttt 8027960  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||| ||||  ||| | |||||||| |||||||||| ||||| ||| ||||    
T  8027959 acgtttttagcggtgttgaataatgtaatctctcgatttgaatgaatgaatatcattttgtttctgtc 8027892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 16419294 - 16419461
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| || |||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||  ||||||||| ||||||||||  ||||||||||    
T  16419294 tattccggtgactttaattttatcatatatttttgtaggcattatgccgtcatatgctattaacttgattgttgtgagtttgttcgcagattcatctttt 16419393  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  ||| |  |||||||  ||||||||| ||||||||||||||    
T  16419394 acgtttttagcggtgttgaatgatgtaatctctcaatttgaataaatgaatatcattttatttttgtc 16419461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 91 - 248
Target Start/End: Complemental strand, 33740512 - 33740355
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctt 190  Q
    ||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||| | |  ||||| ||||||||||  |||||| ||||| | ||    
T  33740512 gtcactttaattttatcatatatttttataggcattatgccgttatatgctattaacttggataatgtgagtttgttcgcagattcatcctttacgtttt 33740413  T
Q  191 taacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttattttt 248  Q
    || ||||| ||||||||||  ||| ||||||| || |||||||||||||||| |||||    
T  33740412 tagcagtgttgaatgatgtaatctcttgatttaaatgaatgaatattattttgttttt 33740355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 84 - 239
Target Start/End: Complemental strand, 8196348 - 8196193
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| |||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||| | || ||||| | ||||||||  |||||| |||    
T  8196348 tattccggtcactttaattttatcgcatatttttgtaggcattatgtcgttatatgctattaacttggatgctgtgagtgtgttcgcaaattcatccttt 8196249  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattat 239  Q
    |||| |||| | ||| ||||||||||  ||| | |||||||| |||||||||||||    
T  8196248 acatttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatattat 8196193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 84 - 248
Target Start/End: Complemental strand, 7881043 - 7880879
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| | || ||||| ||||||||||  |||||  |||    
T  7881043 tattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgactttgttcgcagattcattcttt 7880944  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttattttt 248  Q
    || | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| |||||    
T  7880943 acgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgttttt 7880879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 8497103 - 8497271
Alignment:
Q  84 tattccagtcactttaattttatcatatatttt-tgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttt 182  Q
    |||||| ||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||||||| | || ||||| ||||||||||  |||||| ||    
T  8497103 tattccggtcactttaatttcatcatatattttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctt 8497202  T
Q  183 tacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    ||| | |||| | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| ||||||||    
T  8497203 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 8497271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 36 - 251
Target Start/End: Original strand, 12653031 - 12653247
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||| | ||||||||  ||||||  || | | |  |||||| ||| |||||||||||||||||||||||||| |||| ||| ||||    
T  12653031 attcaatcaaagatttggccgtcaacgttgcagatctggaggtcatggatattccggtcgctttaattttatcatatatttttgtacgcattatgccgtt 12653130  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaat 234  Q
    ||||||||||||||| | |||||||| ||||||||||  |||||| | ||| | |||| | ||| ||||||||||  ||| | ||||| || ||||||||    
T  12653131 atatgctattaacttggatgttgtgagtttgttcgcagattcatcctgtacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaat 12653230  T
Q  235 attattttatttttgtc 251  Q
    || ||||| ||||||||    
T  12653231 atcattttgtttttgtc 12653247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 84 - 207
Target Start/End: Original strand, 33110747 - 33110870
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||| ||| || |||| |||||| |||    
T  33110747 tattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttatttgcatattcatccttt 33110846  T
Q  184 acatctttaacagtggtgaatgat 207  Q
    || | |||  ||||| ||||||||    
T  33110847 acgtttttggcagtgttgaatgat 33110870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 91 - 251
Target Start/End: Complemental strand, 23947252 - 23947091
Alignment:
Q  91 gtcactttaa-ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatct 189  Q
    |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||| |||||||| |  |||||| ||||| | |    
T  23947252 gtcactttaaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgtagattcatcctttacgttt 23947153  T
Q  190 ttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    ||| | | | ||||||||||  ||| | |||||||| |||||||||| ||||| ||||||||    
T  23947152 ttagcggcgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 23947091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 84 - 250
Target Start/End: Original strand, 4088596 - 4088762
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||| | || ||||| ||||||||||  |||||| |||    
T  4088596 tattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgccattaacttggatgctgtgagtttgttcgcagattcatccttt 4088695  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    || | |||| | ||| |||||||  |  ||| |  ||||||| |||||||||| ||||| |||||||    
T  4088696 acgtttttagcggtgttgaatgaaataatctctcaatttgaatgaatgaatatcattttgtttttgt 4088762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 91 - 251
Target Start/End: Complemental strand, 28635047 - 28634887
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctt 190  Q
    ||||||||||||||||||| ||||||||||||||| ||| |||||||||| |||||||| | |||||||| ||||||| ||  |||||| ||||| | ||    
T  28635047 gtcactttaattttatcatgtatttttgtaggcattatgccgttatatgcgattaacttggatgttgtgagtttgttcacagattcatcctttacgtttt 28634948  T
Q  191 taacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || |  || ||||||||||   |||| |||||||| |||||||||| | ||| ||||||||    
T  28634947 tagcgatgttgaatgatgtaacctatcgatttgaatgaatgaatatcagtttgtttttgtc 28634887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 236
Target Start/End: Original strand, 25337700 - 25337853
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttt 182  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || | |||||||| |||||||||   || ||| | ||||||||||  |||||| ||    
T  25337700 gtattccagtcaccttaattttatcatatatttttgtaggcattatattgttatatgatattaacttgaatggtgtaagtttgttcgcacattcatcatt 25337799  T
Q  183 tacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatat 236  Q
    || || ||||  |||| | |||||||| ||||||| ||||||| |||| |||||    
T  25337800 tatatttttagtagtgttaaatgatgtactctattaatttgaatgaataaatat 25337853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 92 - 248
Target Start/End: Complemental strand, 7875977 - 7875821
Alignment:
Q  92 tcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttt 191  Q
    |||||||||||| ||||||||||||||||||||| |||  |||||||||||||||||| | || ||||| ||||||||||  |||||  ||||| | |||    
T  7875977 tcactttaatttcatcatatatttttgtaggcattatgcagttatatgctattaacttggatgctgtgactttgttcgcagattcattctttacgttttt 7875878  T
Q  192 aacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttattttt 248  Q
    | | ||| ||||||||||  ||| | ||||| || |||||||||| ||||| |||||    
T  7875877 agcggtgttgaatgatgtaatctctcgatttaaatgaatgaatatcattttgttttt 7875821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 84 - 207
Target Start/End: Original strand, 10228815 - 10228938
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| || |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | |  ||| | ||||||||||  |||||| |||    
T  10228815 tattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatactgtaagtttgttcgcaaattcatccttt 10228914  T
Q  184 acatctttaacagtggtgaatgat 207  Q
    || | |||||| ||| ||||||||    
T  10228915 acgtttttaacggtgttgaatgat 10228938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 84 - 250
Target Start/End: Complemental strand, 16892757 - 16892595
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| | ||| || | ||||||||||   ||||| |||    
T  16892757 tattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgtcgtaagtttgttcgcagaatcatcattt 16892658  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    || | ||||   ||| ||||||||||  ||| | |||||    |||||||||| |||||||||||||    
T  16892657 acgtttttagtggtgttgaatgatgtaatctctcgattt----gaatgaatataattttatttttgt 16892595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 249
Target Start/End: Original strand, 4468645 - 4468853
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||| | ||||||||  ||||| | || | | |  |||||| | ||||||||||||||||||||||||||||||||| ||| ||||    
T  4468645 attcaatcaaagatttggccgtcaacgttgcagatccagaggtcatggatattccggccactttaattttatcatatatttttgtaggcattatgccgtt 4468744  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaat 234  Q
    ||||||||||||||      | |||| ||||||||||  |||||| ||||||  |||| | ||| ||||||||||   || | ||||| || ||||||||    
T  4468745 atatgctattaact------tggtgagtttgttcgcagattcatcctttacacttttagcggtgttgaatgatgtaaactctcgatttaaatgaatgaat 4468838  T
Q  235 attattttatttttg 249  Q
    || ||||| ||||||    
T  4468839 atcattttgtttttg 4468853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 7027999 - 7028060
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctatta 145  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  7027999 tattccggtcactttaattttatcatatatttttgtaggcattatggcgttatatgctatta 7028060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 34489356 - 34489421
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactt 149  Q
    ||||||| ||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  34489356 gtattccggtcactttaattttatc-tatatttttgtagccattatgtcgttatatgctattaactt 34489421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 20619603 - 20619663
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctatt 144  Q
    |||||| |||||||||||||||||||||||||||||| | || ||||||||||||||||||    
T  20619603 tattccggtcactttaattttatcatatatttttgtatgaattatgtcgttatatgctatt 20619663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 112 - 250
Target Start/End: Original strand, 12168840 - 12168980
Alignment:
Q  112 atttttgtaggcataatgtcgttatatgctattaa----ctttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgat 207  Q
    |||||||||||||| ||||||||||||||||||||    ||||| |||||||| ||| || |||  |||||| ||||  | |||| | ||| ||||||||    
T  12168840 atttttgtaggcattatgtcgttatatgctattaattaactttgatgttgtgagtttattagcagattcatcctttaagtttttagcggtgttgaatgat 12168939  T
Q  208 gttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    ||  |||   |||||||| |||||||||| |||||||||||||    
T  12168940 gtaatctc--gatttgaatgaatgaatatcattttatttttgt 12168980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 4351947 - 4351882
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactt 149  Q
    ||||| ||||| ||||||| ||||||||||||||||||||||| ||||  |||| ||||||||||||    
T  4351947 gtatttcagtcgctttaatgttatcatatatttttgtaggcattatgt-tttatgtgctattaactt 4351882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 9341594 - 9341525
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    ||||||||||| | |||||||||||  ||||||| |||||||||||||| | |||||||| ||||||||||    
T  9341594 ttttatcatat-tgtttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgca 9341525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 7976117 - 7976048
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttta 184  Q
    |||||||||||  || |||| |||||||||||||| | |||||||| ||||||||||| |||||| ||||    
T  7976117 tttgtaggcattttgccgttgtatgctattaacttaggtgttgtgagtttgttcgcatattcatccttta 7976048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 8519049 - 8518993
Alignment:
Q  94 actttaattttatcatatatttttgtaggca-taatgtcgttatatgctattaactt 149  Q
    ||||||||||||||||||||||||||||  | || |||||||| |||||||||||||    
T  8519049 actttaattttatcatatatttttgtagatattattgtcgttacatgctattaactt 8518993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 20225999 - 20226080
Alignment:
Q  102 tttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttta 184  Q
    |||||||||| | |||||||||||  ||||||| |||||||||||||| | | |||||| ||||||||||  |||||| ||||    
T  20225999 tttatcatat-tatttgtaggcattttgtcgttgtatgctattaacttgggtattgtgagtttgttcgcaaattcatcattta 20226080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 22119983 - 22120064
Alignment:
Q  102 tttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttta 184  Q
    |||||||||| | |||||||||||  ||||||| |||||||||||||| | | |||||| ||||||||||  |||||| ||||    
T  22119983 tttatcatat-tatttgtaggcattttgtcgttgtatgctattaacttgggtattgtgagtttgttcgcaaattcatcattta 22120064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 177
Target Start/End: Complemental strand, 33053129 - 33053036
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttca 177  Q
    ||||| |||| |||| | ||||||||||| | |||||||||||  || |||| |||||||||||||| | || ||||| ||||||||||| ||||    
T  33053129 gtatttcagtgacttaagttttatcatat-tatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcatattca 33053036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 117
Target Start/End: Original strand, 12165975 - 12166008
Alignment:
Q  84 tattccagtcactttaattttatcatatattttt 117  Q
    |||||| |||||||||||||||||||||||||||    
T  12165975 tattccggtcactttaattttatcatatattttt 12166008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 192
Target Start/End: Original strand, 9380169 - 9380260
Alignment:
Q  100 attttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttta 192  Q
    |||||||||||| | |||||| ||||  ||||||| ||| |||||| ||| | |||||||| ||||||||||| |||| | ||||||| ||||    
T  9380169 attttatcatat-tatttgtatgcattttgtcgttgtattctattatcttggatgttgtgagtttgttcgcatattcaccatttacattttta 9380260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 185
Target Start/End: Complemental strand, 29319821 - 29319737
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    |||||||||||  ||||||| ||||  |  |||| |||||||||||||| |||||| ||| ||||||||||  |||| |||||||    
T  29319821 ttttatcatattattttgtaagcattttaccgttgtatgctattaacttggttgttatgagtttgttcgcagattcaccttttac 29319737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 30493692 - 30493748
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||||||||||  || |||| |||||||||||| | | |||||||||||||||||||    
T  30493692 tttgtaggcattttgccgttgtatgctattaacctgggtgttgtgaatttgttcgca 30493748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 33543553 - 33543481
Alignment:
Q  96 tttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttc 168  Q
    ||||||||||| |||||||||||||| ||| || | | ||||| |||||||||  | |||||||| |||||||    
T  33543553 tttaattttattatatatttttgtagacattatattgctatatactattaactcggatgttgtgagtttgttc 33543481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 5e-38; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 36 - 251
Target Start/End: Complemental strand, 50272130 - 50271914
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagatac-gagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||||| ||||||||  |||||   ||  |  || ||||||||||||||||||||| |||||||||||||||||||| ||| ||||    
T  50272130 attcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatgaatattccagtcactttaattttgtcatatatttttgtaggcattatgccgtt 50272031  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaat 234  Q
    ||||||||||||||| | |||||||| ||||||||||  ||||||  |||| | |||| | ||| ||||||||||  | | | |||||||| |||| |||    
T  50272030 atatgctattaacttagatgttgtgagtttgttcgcagattcatccgttacctttttagcggtgttgaatgatgtaatatctcgatttgaatgaataaat 50271931  T
Q  235 attattttatttttgtc 251  Q
    |||||||||||||||||    
T  50271930 attattttatttttgtc 50271914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 9687146 - 9686979
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | || ||||| ||||||||||  |||||| |||    
T  9687146 tattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcgcagattcatccttt 9687047  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  | | | |||||||| |||||||||| ||||| ||||||||    
T  9687046 acgtttttagcggtgttgaatgatgtaatatctcgatttgaatgaatgaatatcattttgtttttgtc 9686979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 25406225 - 25406058
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| || |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | || ||||| ||||||||||  ||||||||||    
T  25406225 tattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatctttt 25406126  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  | | | |||||||| |||||||||| ||||||||||||||    
T  25406125 acgtttttagcggtgttgaatgatgtaatatctcgatttgaatgaatgaatatcattttatttttgtc 25406058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 36 - 251
Target Start/End: Complemental strand, 51868635 - 51868419
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||| | ||||||||  ||||||  |||  | || ||||||  | |||||||||||||||||||||||||||||||| ||| ||||    
T  51868635 attcaatcaaagatttggacgtcaacgttgcagatctggagaccatgaatattccgatgactttaattttatcatatatttttgtaggcattatgccgtt 51868536  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaat 234  Q
    ||||| ||||||||| | || ||||| ||||||||||  |||||| ||||| | |||| | ||| ||||||||||  ||| | |||||||| ||||||||    
T  51868535 atatgttattaacttggatgctgtgagtttgttcgcaaattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaat 51868436  T
Q  235 attattttatttttgtc 251  Q
    || ||||||||||||||    
T  51868435 atcattttatttttgtc 51868419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 50148510 - 50148677
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| | |||||||| ||  ||||||  |||||| |||    
T  50148510 tattccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagttgtttcgcagattcatccttt 50148609  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    |||| |||| |  || ||||||||||  ||| | |||||||| ||| |||||| ||||||||||||||    
T  50148610 acatttttagcgatgttgaatgatgtaatctctcgatttgaatgaaagaatatcattttatttttgtc 50148677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 94 - 251
Target Start/End: Complemental strand, 50166030 - 50165873
Alignment:
Q  94 actttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaa 193  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||| ||||||| ||  |||||| ||||| | ||||     
T  50166030 actttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcacagattcatcctttacgtttttag 50165931  T
Q  194 cagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    | ||| ||||||||||  ||| | ||||| || |||||||||| ||||||||||||||    
T  50165930 cggtgttgaatgatgtaatctctcgatttaaatgaatgaatatcattttatttttgtc 50165873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 84 - 248
Target Start/End: Complemental strand, 11709648 - 11709484
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||| || | |||||||| ||||||||||  |||||| |||    
T  11709648 tattccggtcactttaattttatcatatatttttgtaggcattatgccgtgatatgctattaatttagatgttgtgagtttgttcgcagattcatccttt 11709549  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttattttt 248  Q
    || | ||||   ||| ||||||||||  ||| | |||||||| |||||||||| |||||||||||    
T  11709548 acgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttattttt 11709484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 84 - 248
Target Start/End: Complemental strand, 45805769 - 45805606
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| || ||||||||||||||||||||||||||||| || ||||||||||||| ||||||||| | || ||||| ||||||||||  |||||| |||    
T  45805769 tattccggtgactttaattttatcatatatttttgtaggtattatgtcgttatatg-tattaacttggatgatgtgagtttgttcgcagattcatccttt 45805671  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttattttt 248  Q
    || | |||||| ||| ||||||||||  ||| | |||||||| |||||||||| |||||||||||    
T  45805670 acgtttttaacggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttattttt 45805606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 103 - 251
Target Start/End: Original strand, 48217596 - 48217744
Alignment:
Q  103 ttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtga 202  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||| | |||||||| ||||||||||  |||||| ||||||| |||| ||||| | |    
T  48217596 ttatcatatatttttgtaggcattatgttgttatatgctattaacttggatgttgtgagtttgttcgcaaattcatcctttacatttttagcagtgttaa 48217695  T
Q  203 atgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    |||||||  ||| | |||||||| |||||||||| ||||| ||||||||    
T  48217696 atgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 48217744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 51872003 - 51872170
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | || ||||| ||||||||||  |||||| |||    
T  51872003 tattccggtgactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgctgtgagtttgttcgcagattcatccttt 51872102  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| |||| |||||  ||| |  ||||||| |||||||||| ||| ||||||||||    
T  51872103 acgtttttagcggtgttgaaggatgtaatctctcaatttgaatgaatgaatatcattctatttttgtc 51872170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 91 - 251
Target Start/End: Complemental strand, 41081638 - 41081478
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctt 190  Q
    |||| |||||||||||||||||||||||||||||| |||  |||||||| ||||||||  | |||||||| ||||||| ||  ||||| |||||| | ||    
T  41081638 gtcattttaattttatcatatatttttgtaggcattatgcagttatatgttattaactcggatgttgtgagtttgttcacagattcatgttttacgtttt 41081539  T
Q  191 taacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || || || |||||||||| |||||| |||||||| |||||||||| ||||| ||||||||    
T  41081538 tagcactgttgaatgatgtactctatcgatttgaatgaatgaatatcattttgtttttgtc 41081478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 33291359 - 33291192
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||| | || ||||| |||||| |||  |||||| |||    
T  33291359 tattccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctgttaacttggatgctgtgagtttgttagcagattcatcattt 33291260  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | ||||   ||| ||||||||||  ||| | ||||| || |||||||||| ||||||||||||||    
T  33291259 acgtttttattggtgttgaatgatgtaatctctcgatttaaatgaatgaatatcattttatttttgtc 33291192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 84 - 250
Target Start/End: Original strand, 7342862 - 7343028
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| || |||||||||||||||||||||||| ||||||| |||  |||||||||||||||||| | || ||||| ||||||||||  |||||| |||    
T  7342862 tattccggtgactttaattttatcatatatttttataggcattatgatgttatatgctattaacttggatgctgtgagtttgttcgcagattcatccttt 7342961  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    || | |||| | ||| ||| ||||||  ||| | |||||||| |||||||||| |||||||||||||    
T  7342962 acgtttttagcggtgttgagtgatgtaatctctcgatttgaatgaatgaatatcattttatttttgt 7343028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 84 - 250
Target Start/End: Complemental strand, 32677071 - 32676910
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||     ||||||||| | || ||||| ||||||||||  ||||||||||    
T  32677071 tattccagtcactttaattttatcatatatttttgtaggcattatgccgtta-----tattaacttggatgatgtgagtttgttcgcagattcatctttt 32676977  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    || | ||||   ||| ||||||||||  ||| |||||||||| |||| ||||| |||||||||||||    
T  32676976 acgtttttagtggtgttgaatgatgtaatctcttgatttgaatgaataaatatcattttatttttgt 32676910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 37 - 209
Target Start/End: Original strand, 5701351 - 5701524
Alignment:
Q  37 ttcaatcaaagatttgggcatcaacgtttgagatctatagatacgag-tattccagtcactttaattttatcatatatttttgtaggcataatgtcgtta 135  Q
    ||||||||||||||||||||||||||||  |||||   ||| |   | |||||| ||||||||||||| ||||||||||| ||||||||| ||| |||||    
T  5701351 ttcaatcaaagatttgggcatcaacgttgcagatccggagacaatggatattccggtcactttaatttcatcatatatttgtgtaggcattatgccgtta 5701450  T
Q  136 tatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgt 209  Q
    |||||||||||||| | |||||||| ||||||||||  |||||| ||||| | |||| | ||| ||||||||||    
T  5701451 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagcggtgttgaatgatgt 5701524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 94 - 251
Target Start/End: Original strand, 19723463 - 19723620
Alignment:
Q  94 actttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaa 193  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| | || ||||| ||| ||||||  |||||| ||||| | ||||     
T  19723463 actttaattttatcatatatttttgtaggcattatgtcgttatatgttattaacttggatgctgtgagtttattcgcagattcatcctttacgtttttag 19723562  T
Q  194 cagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
      ||| ||||||||||  ||| | |||||||| |||||||||| ||||||||| ||||    
T  19723563 tggtgttgaatgatgtaatctctcgatttgaatgaatgaatataattttatttatgtc 19723620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 40 - 251
Target Start/End: Complemental strand, 19715881 - 19715669
Alignment:
Q  40 aatcaaagatttgggcatcaacgtttgagatctatagatacgag-tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatat 138  Q
    |||||||||||||||| ||||||||  ||||||| ||  |   | |||||| ||||||||||||| ||||||||||||||||||||| |||  |||||||    
T  19715881 aatcaaagatttgggcgtcaacgttgcagatctagaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcattatgctgttatat 19715782  T
Q  139 gctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatatta 238  Q
    ||||||||||| | || ||||| ||| ||||||  |||||| ||||| | |||| | ||| ||||||||||  ||| |  |||| || |||||||||| |    
T  19715781 gctattaacttggatgctgtgagtttattcgcagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcaatttaaatgaatgaatatca 19715682  T
Q  239 ttttatttttgtc 251  Q
    |||||||||||||    
T  19715681 ttttatttttgtc 19715669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 91 - 251
Target Start/End: Original strand, 11454082 - 11454244
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttata--tgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatc 188  Q
    ||||||||||||||||||||||||| ||||||||| ||| | |||||  |||||||||||| | |||||||| ||||||||||  |||||| ||||| |     
T  11454082 gtcactttaattttatcatatatttatgtaggcattatgccattatatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtt 11454181  T
Q  189 tttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    |||| | ||| ||||||||||  ||| | |||||||| |||| ||||| ||||||||||||||    
T  11454182 tttagcggtgttgaatgatgtaatctctcgatttgaatgaataaatatcattttatttttgtc 11454244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 92 - 251
Target Start/End: Original strand, 30879223 - 30879382
Alignment:
Q  92 tcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttt 191  Q
    |||||||||||| ||||||||||||||||| ||| |||| ||||||| ||||||||| || |||||||| ||||||||||  |||||  ||||| | |||    
T  30879223 tcactttaatttcatcatatatttttgtagacattatgttgttatatactattaactatgatgttgtgagtttgttcgcagattcattctttacgttttt 30879322  T
Q  192 aacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    | | ||| ||||||||||  ||| | |||||||| |||||||||| ||||| ||||||||    
T  30879323 agcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 30879382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 27915045 - 27914881
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||| |||||||||||||||||| ||  ||||||||||||||||||| || | || ||||| ||||||||    |||||| |||    
T  27915045 tattccggtcactttaatttcatcatatatttttgtaggtattttgtcgttatatgctattaatttggatgctgtgagtttgttcg---attcatccttt 27914949  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    |||| |||| | ||| ||||||||||  | | |||||||||| |||||||||| ||||| ||||||||    
T  27914948 acatttttagcggtgttgaatgatgtaatatcttgatttgaatgaatgaatatcattttgtttttgtc 27914881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 91 - 251
Target Start/End: Complemental strand, 5324492 - 5324333
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctt 190  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||| | |||||||||  |||||  ||||| | ||    
T  5324492 gtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtg-agttgttcgcagattcatgctttacgtttt 5324394  T
Q  191 taacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || |  || ||||||||||  ||| | ||||| || |||||||||  ||||| ||||||||    
T  5324393 tagcgatgttgaatgatgtaatctctcgatttaaatgaatgaataacattttgtttttgtc 5324333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 9172630 - 9172797
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| || |||||||||||||||||||||||| ||||||| ||| || ||| |||||||||||| | || ||||| ||||||||||  |||||| |||    
T  9172630 tattccggtgactttaattttatcatatatttttataggcattatgccgctatttgctattaacttggatgatgtgagtttgttcgcagattcatccttt 9172729  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  ||| |  ||||||| ||||||||||  |||||||||||||    
T  9172730 acgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatatctttttatttttgtc 9172797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 9180612 - 9180779
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| || |||||||||||||||||||||||| ||||||| ||| || ||| |||||||||||| | || ||||| ||||||||||  |||||| |||    
T  9180612 tattccggtgactttaattttatcatatatttttataggcattatgccgctatttgctattaacttggatgatgtgagtttgttcgcagattcatccttt 9180711  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||| ||||||||||  ||| |  ||||||| ||||||||||  |||||||||||||    
T  9180712 acgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatatctttttatttttgtc 9180779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 184
Target Start/End: Complemental strand, 39927499 - 39927396
Alignment:
Q  81 gagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatct 180  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||  |||||| || | |||||||| ||||||||||| ||||||     
T  39927499 gagtattccaatcactttaattttatcatatatttttgtaggcattatgccgttatatcttattaatttggatgttgtgagtttgttcgcatattcatcc 39927400  T
Q  181 ttta 184  Q
    ||||    
T  39927399 ttta 39927396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 84 - 249
Target Start/End: Original strand, 28035279 - 28035441
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| |||||||||||||||||||| |||||||||||||| ||| ||||||||| ||||||||||| |||||||| |||||  |||  |||||| |||    
T  28035279 tattccggtcactttaattttatcataaatttttgtaggcattatgccgttatatgttattaactttgatgttgtgagtttgt--gcagattcatccttt 28035376  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttg 249  Q
    || | |||| | ||| ||||||||||  |||  | | ||||| |||||||||| ||||||||||||    
T  28035377 acgtttttagcggtgttgaatgatgtaatct-ctcaattgaatgaatgaatatcattttatttttg 28035441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 86 - 236
Target Start/End: Complemental strand, 31130532 - 31130382
Alignment:
Q  86 ttccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    |||| |||||||||||||||| || ||||||||||||||| |||||||||||| |||||||||| | || ||||| ||||||| ||| |||||| |||||    
T  31130532 ttccggtcactttaattttattatgtatttttgtaggcattatgtcgttatattctattaacttggatgctgtgagtttgttcacatattcatcctttac 31130433  T
Q  186 atctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatat 236  Q
    || |||| |  || ||||||||||   || | |||||||| ||||||||||    
T  31130432 atttttagcgatgttgaatgatgtaacctgtcgatttgaatgaatgaatat 31130382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 251
Target Start/End: Original strand, 20266444 - 20266609
Alignment:
Q  86 ttccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    |||||||||||||||||| |||||||| |||||||| ||| ||| |||||||||| |||||||| | |||||||| ||| ||||||  |||||| |||||    
T  20266444 ttccagtcactttaatttcatcatatacttttgtagacattatgccgttatatgcaattaacttggatgttgtgagtttattcgcagattcatcctttac 20266543  T
Q  186 atctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
     | ||||   ||| ||||| ||||  ||| | |||||||| |||||||||| ||||| ||||||||    
T  20266544 gtttttagtggtgttgaataatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtc 20266609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 38520476 - 38520375
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||||| | |||||||| ||||||| ||  |||||| |||    
T  38520476 tattccagtcactttaattttatcgtatatttttgtaggcattataccgttatatgctattaacttggatgttgtgagtttgttcacaaattcatccttt 38520377  T
Q  184 ac 185  Q
    ||    
T  38520376 ac 38520375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 83 - 171
Target Start/End: Complemental strand, 18569253 - 18569165
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    ||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||| || | |||||||| ||| ||||||    
T  18569253 gtattccggtcactttaattttatcatatacttttgtaggcattatgtcgttatatgctattaatttggatgttgtgagtttattcgca 18569165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 40880947 - 40880867
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    ||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||| | |||||||| ||||||||||    
T  40880947 gtcactttaattttatcatatatttttgtaggcattatgctgttatatgctattaacttggatgttgtgagtttgttcgca 40880867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 33817109 - 33816942
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||| ||||||||| | || ||||| |||||||||   |||||| |||    
T  33817109 tattccggtcactttaattttctcatatatttttgtaggcattatgtcattatatgttattaacttggatgatgtgagtttgttcgcggattcatccttt 33817010  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    |  | |||| ||||  |||||||||   | | |||||||||| ||||||| || ||||| ||||||||    
T  33817009 atgtttttagcagtattgaatgatgaaatattttgatttgaatgaatgaagatcattttgtttttgtc 33816942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 33876579 - 33876412
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||| ||||||||| | || ||||| |||||||||   |||||| |||    
T  33876579 tattccggtcactttaattttctcatatatttttgtaggcattatgtcattatatgttattaacttggatgatgtgagtttgttcgcggattcatccttt 33876480  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    |  | |||| ||||  |||||||||   | | |||||||||| ||||||| || ||||| ||||||||    
T  33876479 atgtttttagcagtattgaatgatgaaatattttgatttgaatgaatgaagatcattttgtttttgtc 33876412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 34519268 - 34519435
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| |||||||||||||||||||||||||||||| |||| ||||| |||| |||||||||||| | |  ||||| ||||||||||  |||||| |||    
T  34519268 tattccggtcactttaattttatcatatatttttgtatgcattatgtcattatttgctattaacttggatcctgtgagtttgttcgcagattcatccttt 34519367  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    || | |||| | ||  || |||||||  ||  | |||||||| |||||||||| ||||| ||||||||    
T  34519368 acgtttttagcggtaatggatgatgtaatccctcgatttgaatgaatgaatatcattttgtttttgtc 34519435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 30818292 - 30818216
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtga 160  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||| | ||||||||    
T  30818292 tattccggtcactttaattttatcatatatttttgtaggcattatagcgttatatgctattaacttggatgttgtga 30818216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 251
Target Start/End: Original strand, 31836989 - 31837141
Alignment:
Q  99 aattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtg 198  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||||||||||| | |  ||||| ||||||||||  || ||| ||||||| |||| | |||    
T  31836989 aatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatactgtgagtttgttcgcagatttatcctttacatttttagcggtg 31837088  T
Q  199 gtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
     |||||||| |  ||| | ||||| || |||||||||| ||||| ||||||||    
T  31837089 ttgaatgatataatctctcgatttaaatgaatgaatatcattttgtttttgtc 31837141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 9919529 - 9919693
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| || |||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||| | || ||||| ||||||||||  || ||| |||    
T  9919529 tattccggtgactttaatttgatcatatatttttgtag-cattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagatttatccttt 9919627  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgtc 251  Q
    |||| |||| | ||  ||||||||||  ||| | ||||||||  ||||||||| ||||||||||||||    
T  9919628 acatttttagcggt-ttgaatgatgtaatctctcgatttgaa-taatgaatatcattttatttttgtc 9919693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 84 - 195
Target Start/End: Original strand, 27872877 - 27872988
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    ||||||| ||| ||||||||||||||||||||||||| |||| ||| ||||||||| |||||||||   |||||||| ||||||||||  |||||| |||    
T  27872877 tattccaatcattttaattttatcatatatttttgtaagcattatgccgttatatgttattaacttgaatgttgtgagtttgttcgcagattcatcattt 27872976  T
Q  184 acatctttaaca 195  Q
    || | |||||||    
T  27872977 acgtttttaaca 27872988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 3871555 - 3871633
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcg 169  Q
    |||||| |||||||| ||||||||||||||||||| ||| ||||||||||||||||||| | |||||||| ||||||||    
T  3871555 gtcactataattttaacatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcg 3871633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 91 - 185
Target Start/End: Complemental strand, 45426000 - 45425906
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||| | || ||||| ||| ||||||  |||||| |||||    
T  45426000 gtcactttaattttatcatatatttttgtaggcattataccgttatatgctattaacttggatgctgtgagtttattcgcagattcatcatttac 45425906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 185
Target Start/End: Original strand, 7997929 - 7998030
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||| ||||||||||||||||||||| ||| ||||||||| ||||||||| | || ||||| |||||| |||  |||||| |||    
T  7997929 tattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgttattaacttggatgatgtgagtttgtttgcagattcatccttt 7998028  T
Q  184 ac 185  Q
    ||    
T  7998029 ac 7998030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 242
Target Start/End: Original strand, 40646821 - 40646971
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtga-atttgttcgcatcttcatcttttacatct 189  Q
    |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| ||| | ||||||||  ||||||||||  |||||| ||||| | |    
T  40646821 gtcactataatttcatcatatatttttgtaggcattatgtcgttatatgctattatcttggatgttgtgagttttgttcgcagattcatcctttacgttt 40646920  T
Q  190 ttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattatttt 242  Q
    ||| | ||| |||||| |  ||||  | |||||||| |||||||||| |||||    
T  40646921 ttagcggtgttgaatgttaatctc--tcgatttgaatgaatgaatatcatttt 40646971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 14545608 - 14545722
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||||| ||||||||  |||||   ||   | |||||||||  ||| |||||||||||||||||||||||||||||| ||| ||||    
T  14545608 attcaatcaaagatttgggcgtcaacgttgcagatccggaggccatgagtattccgatcattttaattttatcatatatttttgtaggcattatgccgtt 14545707  T
Q  135 atatgctattaactt 149  Q
    ||| |||||||||||    
T  14545708 atacgctattaactt 14545722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 48365697 - 48365619
Alignment:
Q  94 actttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcat 172  Q
    ||||||||||||||||||||||||||||| || ||||||||||| | ||||||||| | || ||||| |||||||||||    
T  48365697 actttaattttatcatatatttttgtaggaattatgtcgttataagttattaacttggatgctgtgagtttgttcgcat 48365619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 84 - 250
Target Start/End: Complemental strand, 35584559 - 35584398
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| ||||||||||||| ||||||||||||||||||||| |||  ||||||    |||||||| | || ||||| ||||||||||  |||||| |||    
T  35584559 tattccggtcactttaatttcatcatatatttttgtaggcattatgctgttata----attaacttggatgctgtgagtttgttcgcaaattcatccttt 35584464  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    || | |||| | ||  ||||||||||  ||| | |||||||| |||||||||| ||||| |||||||    
T  35584463 acgt-tttagcggtattgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 35584398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 7312050 - 7311982
Alignment:
Q  81 gagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactt 149  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  7312050 gagtatttcggtcactttagttttatcatatatttttgtaggcattatgccgttatatactattaactt 7311982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 39987480 - 39987592
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagatacgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtta 135  Q
    ||||||||||||| |||||| ||||||||  |||||   ||  | | ||||||| |||||||||||||||||||||| |||| ||||||| |||  ||||    
T  39987480 attcaatcaaagaattgggcgtcaacgttgcagatccggaggcatgggtattccggtcactttaattttatcatata-ttttataggcattatgctgtta 39987578  T
Q  136 tatgctattaactt 149  Q
    ||||||||||||||    
T  39987579 tatgctattaactt 39987592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 242
Target Start/End: Original strand, 5856040 - 5856198
Alignment:
Q  83 gtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttt 182  Q
    |||||||| |||||||||||||| ||||| | |||||||  ||  || |||| ||||||||||||||   |||||  ||||||||| ||  |||||| ||    
T  5856040 gtattccaatcactttaattttaccatat-tatttgtagaaattttgccgttgtatgctattaacttgaatgttgcaaatttgttcacaaattcatcatt 5856138  T
Q  183 tacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattatttt 242  Q
    ||| | ||||||| |  |||| ||||| ||||||  ||||||| |||||||||| |||||    
T  5856139 tacttttttaacaatattgaacgatgtactctatcaatttgaatgaatgaatataatttt 5856198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 250
Target Start/End: Original strand, 44637567 - 44637723
Alignment:
Q  98 taattttatcatatatttttgtaggcataa----tgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaa 193  Q
    ||||||||||  |||||||||||||||| |    || ||||||||| ||||||||| | || ||||| ||| ||||||  | |||| |||||   ||||     
T  44637567 taattttatctcatatttttgtaggcattaattatgccgttatatgttattaacttggatgctgtgagtttattcgcagatccatcctttacgattttag 44637666  T
Q  194 cagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    | ||| ||||| |||| |||||| |||| ||| |||||||||| |||||||||||||    
T  44637667 ctgtgttgaataatgtactctatcgattggaatgaatgaatatcattttatttttgt 44637723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 47133051 - 47133121
Alignment:
Q  100 attttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||| ||||||| |||||||||||||  || ||||||||||||||||||| | |||||||| ||||||||||    
T  47133051 atttcatcatat-tttttgtaggcattttgccgttatatgctattaacttggatgttgtgagtttgttcgca 47133121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 194
Target Start/End: Original strand, 27456659 - 27456725
Alignment:
Q  128 tgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaac 194  Q
    ||||||| |||||||||||||| | |||||||| ||||||||||  |||||||||||| | ||||||    
T  27456659 tgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcatcttttacgtttttaac 27456725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 13144775 - 13144663
Alignment:
Q  81 gagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatct 180  Q
    ||||||| |||| ||||  ||||||||||| || |||||||||||  || | || |||||||||||||| | |||||||| ||||||||||  |||| |     
T  13144775 gagtatttcagtgacttagattttatcata-atatttgtaggcattttgccattttatgctattaacttggatgttgtgagtttgttcgcagattcaccc 13144677  T
Q  181 tttacatctttaac 194  Q
    ||||||| ||||||    
T  13144676 tttacatttttaac 13144663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 19061071 - 19061140
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttta 184  Q
    |||||||||||  || |||| |||||||||||||| | |||||||| ||||||||||  |||||||||||    
T  19061071 tttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcacattcatctttta 19061140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 5983985 - 5984060
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttca 177  Q
    ||||||||||| | |||||||||||  ||||||| |||||||||||||| | || ||||| ||||||||||| ||||    
T  5983985 ttttatcatat-tatttgtaggcattttgtcgttgtatgctattaacttgggtgatgtgagtttgttcgcatattca 5984060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 32679085 - 32679015
Alignment:
Q  100 attttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||| ||||||| |||||||||||||  || |||||||||| |||||||| | |||||||| ||||||||||    
T  32679085 atttcatcatat-tttttgtaggcattttgccgttatatgccattaacttggatgttgtgagtttgttcgca 32679015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 32873816 - 32873738
Alignment:
Q  92 tcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    ||||||| |||||||||||| | ||||||| |||| |||| || ||||||||||| ||||   |||||||||||||||||    
T  32873816 tcactttgattttatcatat-tatttgtagacatattgtcattgtatgctattaattttggcattgtgaatttgttcgca 32873738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 48750347 - 48750409
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttca 177  Q
    |||||||||||  || |||| |||||||||||||| | |||||||| ||||||||||| ||||    
T  48750347 tttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcatattca 48750409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 190
Target Start/End: Original strand, 14872788 - 14872876
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctt 190  Q
    ||||||||||| | |||||||||||  || |||| |||||||||||||| | || ||||| ||||||||||| |||| | ||||| ||||    
T  14872788 ttttatcatat-tatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcatattcaccctttacttctt 14872876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 192
Target Start/End: Original strand, 24583308 - 24583385
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatcttta 192  Q
    |||||||||||  || |||| |||||||||||||| | || ||||| ||||||||||  |||||| ||||||| ||||    
T  24583308 tttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttgttcgcagattcatcctttacattttta 24583385  T

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Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 250
Target Start/End: Complemental strand, 18649852 - 18649756
Alignment:
Q  154 gttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    |||||||||||||| | |  |||||||||||| | |||| ||||| |||||||| | || |||  |||| ||||||||||| | ||||| |||||||    
T  18649852 gttgtgaatttgtttgaaggttcatcttttacgtttttagcagtgttgaatgatatactatatcaatttaaacgaatgaatgtcattttgtttttgt 18649756  T

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Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 31919138 - 31919221
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    ||||||||||| | ||||||| |||  ||||||| |||||||||||||| | ||||| || ||||||||||  |||||| |||||    
T  31919138 ttttatcatat-tatttgtagacattttgtcgttgtatgctattaacttggatgttgcgagtttgttcgcagattcatcctttac 31919221  T

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Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 185
Target Start/End: Complemental strand, 34878221 - 34878138
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttac 185  Q
    ||||||||||| | |||||||||||  || |||| |||||||||||||| | |||||||| ||||||| ||  |||| |||||||    
T  34878221 ttttatcatat-tatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcacagattcaccttttac 34878138  T

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Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 36775640 - 36775584
Alignment:
Q  115 tttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||||||||||  || |||| |||||||||||||| | |||||||| ||||||||||    
T  36775640 tttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgca 36775584  T

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Target: scaffold0311 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 91 - 242
Target Start/End: Original strand, 8834 - 8985
Alignment:
Q  91 gtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctt 190  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | |  || || ||||||| ||| |||||| ||||||| ||    
T  8834 gtcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatactgcgagtttgttcacatattcatcctttacatttt 8933  T
Q  191 taacagtggtgaatgatgttctctattgatttgaacgaatgaatattatttt 242  Q
     ||| ||| ||||||||||  ||| | |||||||| |||||||||| |||||    
T  8934 aaacggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcatttt 8985  T

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Target: scaffold0014 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 36 - 250
Target Start/End: Complemental strand, 201363 - 201148
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||||| ||||||||  |||||  |||   | |  |||||| ||||||||||||||||||||||||||||||||||| ||| ||||    
T  201363 attcaatcaaagatttgggcgtcaacgttgtagatccgtaggccatggatattccggtcactttaattttatcatatatttttgtaggcatcatgccgtt 201264  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaat 234  Q
    |||||||||||| || | |  ||||| | ||||| ||  |||||| ||||||| ||||   ||| ||||||||||  ||||| |||||||| ||||||||    
T  201263 atatgctattaaattggattctgtgagtatgttcacaaattcatcctttacatttttagtggtgttgaatgatgtaatctatcgatttgaatgaatgaat 201164  T
Q  235 attattttatttttgt 250  Q
    || ||||| |||||||    
T  201163 atcattttgtttttgt 201148  T

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Target: scaffold0146 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 36 - 251
Target Start/End: Complemental strand, 16310 - 16094
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctataga-tacgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    |||||||||||||||||||| ||||||||  |||||   ||  || |  |||||| |||||||||||||||| |||||||||||||||||| ||||||||    
T  16310 attcaatcaaagatttgggcgtcaacgttgcagatccggaggctatggatattccggtcactttaattttattatatatttttgtaggcattatgtcgtt 16211  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttacatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaat 234  Q
    ||||||||||||||| | || ||||| |||||||||   ||| || ||||| | |||| | ||| ||||||||||  | | |  ||||||| ||||||||    
T  16210 atatgctattaacttggatgatgtgagtttgttcgctgattcttcctttacgtttttagcggtgttgaatgatgtaatatctcaatttgaatgaatgaat 16111  T
Q  235 attattttatttttgtc 251  Q
    || ||||| ||||||||    
T  16110 atcattttgtttttgtc 16094  T

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Target: scaffold0022 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 86 - 250
Target Start/End: Complemental strand, 83377 - 83212
Alignment:
Q  86 ttccagtcactttaattttatcatatatttttgtaggcata--atgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||| ||||||||||||||| |||| |||||||||||||||  ||| ||||||||||||||||||| | |||||||| ||||||||||  |||||| |||    
T  83377 ttccggtcactttaattttaccatacatttttgtaggcatattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcattt 83278  T
Q  184 acatctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    || | |||| | |   ||||||||||  ||| |||||||||| |||||||||| ||||| |||||||    
T  83277 acgtttttagc-gatttgaatgatgtaatctcttgatttgaatgaatgaatatcattttgtttttgt 83212  T

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Target: scaffold0003 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 87 - 250
Target Start/End: Complemental strand, 361737 - 361574
Alignment:
Q  87 tccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatcttttaca 186  Q
    |||||||||||||||||| |||||||||||||||||||| ||| ||||||||| | ||||||| | |||||||| | ||||||||  || ||| |||||     
T  361737 tccagtcactttaattttctcatatatttttgtaggcattatgccgttatatgttgttaacttggatgttgtgagtgtgttcgcagatttatcctttacg 361638  T
Q  187 tctttaacagtggtgaatgatgttctctattgatttgaacgaatgaatattattttatttttgt 250  Q
    | |||| | ||| ||||||||||  ||| |  || |||| |||||||||| |||||||||||||    
T  361637 tttttagcggtgttgaatgatgtaatctctcaatatgaatgaatgaatatcattttatttttgt 361574  T

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Target: scaffold0426 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 6392 - 6528
Alignment:
Q  36 attcaatcaaagatttgggcatcaacgtttgagatctatagat-acgagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgtt 134  Q
    ||||||||||| |||||||||||||||||  ||||| | ||   | || || ||| ||||||||| |||||||||||||||||||| |||| ||||||||    
T  6392 attcaatcaaatatttgggcatcaacgttgcagatccaaaggccatgaataatccggtcactttagttttatcatatatttttgtatgcattatgtcgtt 6491  T
Q  135 atatgctattaactttgttgttgtgaatttgttcgca 171  Q
    ||||||||||||||| | |||||||| ||||| ||||    
T  6492 atatgctattaacttggatgttgtgagtttgtacgca 6528  T

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Target: scaffold0495 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 84 - 207
Target Start/End: Original strand, 5534 - 5657
Alignment:
Q  84 tattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgcatcttcatctttt 183  Q
    |||||| || |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | |  ||| | ||||||||||  |||||| |||    
T  5534 tattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatactgtaagtttgttcgcaaattcatccttt 5633  T
Q  184 acatctttaacagtggtgaatgat 207  Q
    || | |||||| ||| ||||||||    
T  5634 acgtttttaacggtgttgaatgat 5657  T

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Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 171
Target Start/End: Complemental strand, 34725 - 34636
Alignment:
Q  81 gagtattccagtcactttaattttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||| |||||||||||||||||||||||||| | |||||||||||  ||| ||| |||||  ||||||| | |||||| | ||||||||||    
T  34725 gagttttccagtcactttaattttatcatat-tatttgtaggcattttgttgttgtatgcctttaacttagatgttgtaagtttgttcgca 34636  T

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Target: scaffold0888 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 1622 - 1552
Alignment:
Q  100 attttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||||||||||| | |||||||||||  | ||||||||||||||||| |||| || ||||| ||||||||||    
T  1622 attttatcatat-tatttgtaggcattttatcgttatatgctattaattttgatgatgtgagtttgttcgca 1552  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 58032 - 57962
Alignment:
Q  100 attttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    |||| ||||||| |||||||||||||  || ||||||||||||||||||| | || ||||| ||||||||||    
T  58032 atttcatcatat-tttttgtaggcattttgccgttatatgctattaacttggatgctgtgagtttgttcgca 57962  T

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Target: scaffold0127 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 15638 - 15707
Alignment:
Q  101 ttttatcatatatttttgtaggcataatgtcgttatatgctattaactttgttgttgtgaatttgttcgca 171  Q
    ||||||||||| | |||||||||||  || ||||||||||||||||||| | || ||||| ||||||||||    
T  15638 ttttatcatat-tatttgtaggcattttgccgttatatgctattaacttgggtgctgtgagtttgttcgca 15707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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