View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1804_low_10 (Length: 415)
Name: NF1804_low_10
Description: NF1804
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1804_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 362; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 1 - 397
Target Start/End: Complemental strand, 35473053 - 35472663
Alignment:
| Q |
1 |
tgacagggtgttaaacaaattaaatgaattgtattttttcaggcatgcatgtccattaatttgggtaggagaggttattaaacctcaatgaatatatgtg |
100 |
Q |
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| T |
35473053 |
tgacagggtgttaaacaaattaaatgaattgtattttttcaggcatgcatgtccattaatttgggtaggagagattattaaacctcaatgaatatatgtg |
35472954 |
T |
|
| Q |
101 |
agatgttacatggtgtggtactactcacaatcagagtcaacaaatagcagtgtaatgtgtctgtaaagaacaaaggaatccataaataagaatggaaacg |
200 |
Q |
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| T |
35472953 |
agatgttacatggtgtggtactactcataatcagagtcaacaaatagcagtgtaatgtgtctgtcaagaacaaaggaatccataaataagaatggaaacg |
35472854 |
T |
|
| Q |
201 |
tttcagaggacaggatcccgatagtgatatcttggtctgggactttgttgggcatgtcaaaaatggcacagagacccttagaagtcgtggtagggtcaaa |
300 |
Q |
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| T |
35472853 |
tttcagaggacaggatcccgatagtgatatcttggtctgggactttgttgggcatgtcaaaaatggcacagagacccttagaagtcgtggtagggtcaaa |
35472754 |
T |
|
| Q |
301 |
atgtgatcataatcataatagaaatagaaaggaattgaggaaggtaattaaccaattggttgttgcaggctagctgctatcccttgtccctcgctgc |
397 |
Q |
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| T |
35472753 |
atgtgatcataatcataata------gaaaggaattgaggaaggtaattaaccaattggttgttgcaggctagctgctatcccttgtccctcgctgc |
35472663 |
T |
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