View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18050_low_28 (Length: 250)

Name: NF18050_low_28
Description: NF18050
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18050_low_28
NF18050_low_28
[»] chr7 (22 HSPs)
chr7 (9-177)||(40949928-40950096)
chr7 (133-177)||(40693556-40693600)
chr7 (130-171)||(37385267-37385308)
chr7 (135-172)||(38547312-38547349)
chr7 (131-171)||(37392040-37392080)
chr7 (129-172)||(2323299-2323342)
chr7 (132-171)||(30391157-30391196)
chr7 (133-172)||(45420082-45420121)
chr7 (129-167)||(47905154-47905192)
chr7 (134-171)||(8742394-8742431)
chr7 (131-172)||(23848086-23848127)
chr7 (130-171)||(23910285-23910326)
chr7 (134-171)||(26153646-26153683)
chr7 (130-171)||(27704431-27704472)
chr7 (135-171)||(44216174-44216211)
chr7 (131-171)||(23389627-23389667)
chr7 (128-172)||(26041315-26041359)
chr7 (132-160)||(27331072-27331100)
chr7 (132-172)||(28030884-28030924)
chr7 (131-171)||(33845039-33845079)
chr7 (137-177)||(34304706-34304746)
chr7 (131-171)||(48395245-48395285)
[»] chr5 (22 HSPs)
chr5 (130-177)||(34428156-34428203)
chr5 (131-171)||(29803222-29803262)
chr5 (131-171)||(36572688-36572728)
chr5 (129-172)||(14206395-14206438)
chr5 (130-171)||(19844343-19844384)
chr5 (133-177)||(36548408-36548452)
chr5 (132-171)||(32872932-32872971)
chr5 (129-171)||(3960203-3960245)
chr5 (131-177)||(5996664-5996710)
chr5 (137-171)||(25561048-25561082)
chr5 (130-172)||(38919859-38919901)
chr5 (133-171)||(42446325-42446363)
chr5 (130-171)||(125088-125129)
chr5 (127-172)||(372742-372787)
chr5 (134-171)||(2629818-2629855)
chr5 (130-167)||(4434478-4434515)
chr5 (128-177)||(11881015-11881064)
chr5 (134-171)||(31748336-31748373)
chr5 (131-164)||(35165676-35165709)
chr5 (134-171)||(42643244-42643281)
chr5 (133-169)||(14508193-14508229)
chr5 (129-169)||(20270565-20270605)
[»] chr3 (31 HSPs)
chr3 (131-177)||(45528970-45529016)
chr3 (129-171)||(50559246-50559288)
chr3 (132-171)||(44855249-44855288)
chr3 (129-171)||(7867745-7867787)
chr3 (135-171)||(3282534-3282570)
chr3 (131-171)||(32146020-32146060)
chr3 (133-177)||(36869865-36869909)
chr3 (132-172)||(44937217-44937257)
chr3 (133-172)||(11056944-11056983)
chr3 (129-168)||(32575429-32575468)
chr3 (129-172)||(46952944-46952987)
chr3 (133-172)||(50876384-50876423)
chr3 (133-171)||(36799397-36799435)
chr3 (133-171)||(41637314-41637352)
chr3 (134-171)||(25188499-25188536)
chr3 (130-171)||(34456786-34456827)
chr3 (134-171)||(37988632-37988669)
chr3 (130-171)||(53392098-53392139)
chr3 (129-177)||(1901954-1902002)
chr3 (129-177)||(1911400-1911448)
chr3 (131-171)||(8254024-8254064)
chr3 (133-177)||(8868871-8868915)
chr3 (131-171)||(34627916-34627955)
chr3 (130-177)||(37035611-37035659)
chr3 (131-171)||(40159872-40159912)
chr3 (135-171)||(40499737-40499773)
chr3 (130-158)||(46323149-46323177)
chr3 (131-171)||(49196693-49196733)
chr3 (131-171)||(54134849-54134889)
chr3 (126-170)||(55344331-55344375)
chr3 (132-172)||(55361255-55361295)
[»] chr4 (29 HSPs)
chr4 (132-177)||(42853937-42853982)
chr4 (131-171)||(44272844-44272884)
chr4 (129-172)||(4511820-4511863)
chr4 (132-172)||(33093137-33093177)
chr4 (134-172)||(4974111-4974149)
chr4 (131-177)||(18874950-18874995)
chr4 (129-167)||(23667870-23667908)
chr4 (133-171)||(35017152-35017190)
chr4 (133-171)||(47014938-47014976)
chr4 (130-171)||(3316346-3316387)
chr4 (134-167)||(9776370-9776403)
chr4 (134-171)||(23220335-23220372)
chr4 (130-171)||(33278671-33278712)
chr4 (130-171)||(33820370-33820411)
chr4 (131-172)||(37393339-37393380)
chr4 (134-171)||(41154048-41154085)
chr4 (135-171)||(1368192-1368228)
chr4 (134-162)||(4701533-4701561)
chr4 (131-171)||(20760252-20760292)
chr4 (131-171)||(20766643-20766683)
chr4 (132-172)||(31413808-31413848)
chr4 (128-160)||(32079121-32079153)
chr4 (124-172)||(32365689-32365737)
chr4 (124-172)||(32621628-32621676)
chr4 (131-171)||(38864770-38864810)
chr4 (132-172)||(41262651-41262691)
chr4 (131-171)||(42815401-42815441)
chr4 (119-171)||(51255731-51255783)
chr4 (123-171)||(53583162-53583210)
[»] chr6 (19 HSPs)
chr6 (123-171)||(27334847-27334895)
chr6 (123-171)||(27395587-27395635)
chr6 (128-172)||(32644617-32644661)
chr6 (132-177)||(12044330-12044375)
chr6 (134-171)||(12280440-12280477)
chr6 (131-167)||(9083099-9083135)
chr6 (123-171)||(17551413-17551461)
chr6 (131-171)||(30767300-30767340)
chr6 (128-171)||(32729883-32729926)
chr6 (130-172)||(12441534-12441576)
chr6 (133-171)||(17902726-17902764)
chr6 (134-171)||(958696-958733)
chr6 (132-177)||(9188972-9189017)
chr6 (130-167)||(12280706-12280743)
chr6 (130-171)||(13658326-13658367)
chr6 (131-171)||(2060656-2060696)
chr6 (131-171)||(3180026-3180066)
chr6 (131-171)||(3339533-3339573)
chr6 (129-177)||(11743010-11743058)
[»] chr1 (18 HSPs)
chr1 (128-171)||(18610767-18610810)
chr1 (132-171)||(35883641-35883680)
chr1 (132-171)||(37843466-37843505)
chr1 (126-177)||(48872371-48872422)
chr1 (133-171)||(3697177-3697215)
chr1 (130-172)||(43612102-43612144)
chr1 (134-172)||(48872050-48872088)
chr1 (132-177)||(16987445-16987490)
chr1 (128-177)||(25989012-25989061)
chr1 (131-172)||(40596076-40596117)
chr1 (130-171)||(42256456-42256497)
chr1 (131-171)||(7078534-7078574)
chr1 (131-171)||(9011642-9011682)
chr1 (135-171)||(9897596-9897632)
chr1 (127-171)||(27742610-27742654)
chr1 (132-172)||(45272182-45272222)
chr1 (131-171)||(48983702-48983742)
chr1 (131-171)||(49804969-49805009)
[»] chr8 (15 HSPs)
chr8 (129-170)||(13885770-13885811)
chr8 (132-177)||(36497659-36497704)
chr8 (130-171)||(41955925-41955966)
chr8 (132-172)||(14233666-14233706)
chr8 (132-172)||(37392150-37392190)
chr8 (132-171)||(13592764-13592803)
chr8 (128-171)||(30170763-30170806)
chr8 (129-172)||(40413371-40413414)
chr8 (130-171)||(5772006-5772047)
chr8 (130-171)||(7678728-7678769)
chr8 (134-171)||(23265377-23265414)
chr8 (126-171)||(45101388-45101433)
chr8 (133-177)||(37562169-37562213)
chr8 (131-171)||(40380278-40380318)
chr8 (135-171)||(45108691-45108727)
[»] chr2 (15 HSPs)
chr2 (130-167)||(18531597-18531634)
chr2 (134-171)||(22303203-22303240)
chr2 (132-172)||(4138207-4138247)
chr2 (129-172)||(4263886-4263928)
chr2 (132-171)||(29168723-29168762)
chr2 (131-177)||(8352832-8352878)
chr2 (133-171)||(18510674-18510712)
chr2 (132-177)||(1052524-1052569)
chr2 (126-171)||(4738606-4738651)
chr2 (134-171)||(15123970-15124007)
chr2 (134-171)||(31629604-31629641)
chr2 (132-172)||(694278-694318)
chr2 (128-164)||(18423802-18423838)
chr2 (132-172)||(29795445-29795485)
chr2 (135-171)||(40635714-40635750)
[»] scaffold0054 (1 HSPs)
scaffold0054 (132-172)||(31622-31662)
[»] scaffold0662 (1 HSPs)
scaffold0662 (133-171)||(1077-1115)
[»] scaffold0041 (1 HSPs)
scaffold0041 (137-171)||(34411-34445)
[»] scaffold0036 (1 HSPs)
scaffold0036 (129-171)||(17999-18041)
[»] scaffold0154 (1 HSPs)
scaffold0154 (134-171)||(19725-19762)
[»] scaffold0016 (1 HSPs)
scaffold0016 (130-171)||(204479-204520)
[»] scaffold0514 (1 HSPs)
scaffold0514 (131-171)||(1530-1570)


Alignment Details
Target: chr7 (Bit Score: 114; Significance: 6e-58; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 9 - 177
Target Start/End: Complemental strand, 40950096 - 40949928
Alignment:
Q  9 gcagataaagacctattataggtggttaatttgatgttgtaatggaatagtttgtttagnnnnnnn--ggtacaaaatcgtttgtttagttaatcgtgtt 106  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||||||||||||         |||||||||| |||||||||||||||||||||    
T  40950096 gcagataaagacctattataggt---taatttgatgttgtaatggaatagtttgtttagtttttttttggtacaaaatagtttgtttagttaatcgtgtt 40950000  T
Q  107 gttttgtggaatccgtcaatataaaaagagaaatgatatttgtataactatt-ttttgacaactttcagaca 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40949999 gttttgtggaatccgtcaatataaaaagagaaatgatatttgtataactatttttttgacaactttcagaca 40949928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 40693600 - 40693556
Alignment:
Q  133 agagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    |||||||||||||||||| |||||||||||||||||||| |||||    
T  40693600 agagaaatgatatttgtacaactattttttgacaacttttagaca 40693556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 37385308 - 37385267
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  37385308 aaaagataaatgatatttgtacaactattttttgacaacttt 37385267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 172
Target Start/End: Complemental strand, 38547349 - 38547312
Alignment:
Q  135 agaaatgatatttgtataactattttttgacaactttc 172  Q
    |||||||||||||||| |||||||||||||||||||||    
T  38547349 agaaatgatatttgtacaactattttttgacaactttc 38547312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 37392040 - 37392080
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  37392040 aaagagaaatgatatttgtacaaccattttttgacaacttt 37392080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 172
Target Start/End: Original strand, 2323299 - 2323342
Alignment:
Q  129 aaaaagagaaatgatatttgtataactattttttgacaactttc 172  Q
    |||||||||||||||||||||| ||| ||||| |||||||||||    
T  2323299 aaaaagagaaatgatatttgtacaacaattttatgacaactttc 2323342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 171
Target Start/End: Original strand, 30391157 - 30391196
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  30391157 aagagaaatgatatttgtataactattttattacaacttt 30391196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 172
Target Start/End: Complemental strand, 45420121 - 45420082
Alignment:
Q  133 agagaaatgatatttgtataactattttttgacaactttc 172  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  45420121 agagaaatgatatttgaacaactattttttgacaactttc 45420082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 167
Target Start/End: Complemental strand, 47905192 - 47905154
Alignment:
Q  129 aaaaagagaaatgatatttgtataactattttttgacaa 167  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  47905192 aaaaagagaaatgatatttgtacaaccattttttgacaa 47905154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 8742394 - 8742431
Alignment:
Q  134 gagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  8742394 gagaaatgatatttgtacaactatgttttgacaacttt 8742431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 23848086 - 23848127
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaactttc 172  Q
    |||||||||||||||||||||||  ||||||| |||||||||    
T  23848086 aaagagaaatgatatttgtataatcattttttaacaactttc 23848127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 23910326 - 23910285
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||| |||||||||||||||| ||| ||||||||||||||||    
T  23910326 aaaatagaaatgatatttgtacaaccattttttgacaacttt 23910285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 26153646 - 26153683
Alignment:
Q  134 gagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  26153646 gagaaatgatatttgtacaactattttatgacaacttt 26153683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 27704431 - 27704472
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||||| ||||||||||  ||||||||    
T  27704431 aaaagagaaatgatatttgtacaactatttttgtacaacttt 27704472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 44216211 - 44216174
Alignment:
Q  135 agaaatgatatttgtataactattttt-tgacaacttt 171  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  44216211 agaaatgatatttgtataactatttttgtgacaacttt 44216174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 23389667 - 23389627
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||| ||||||||||| ||| ||||    
T  23389667 aaagagaaatgatatttgtacaactatttttttacaccttt 23389627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 26041315 - 26041359
Alignment:
Q  128 taaaaagagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||||||||||||||||| ||| ||| ||||| |||||||||||    
T  26041315 taaaaagagaaatgatattcgtacaaccattttatgacaactttc 26041359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 160
Target Start/End: Complemental strand, 27331100 - 27331072
Alignment:
Q  132 aagagaaatgatatttgtataactatttt 160  Q
    |||||||||||||||||||||||||||||    
T  27331100 aagagaaatgatatttgtataactatttt 27331072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 28030884 - 28030924
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaactttc 172  Q
    |||||||||| ||| ||||||| ||||||||||||||||||    
T  28030884 aagagaaatggtatatgtataattattttttgacaactttc 28030924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 33845039 - 33845079
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||| ||||| | ||||||||||||||    
T  33845039 aaagagaaatgatatttgaataaccactttttgacaacttt 33845079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 34304746 - 34304706
Alignment:
Q  137 aaatgatatttgtataactattttttgacaactttcagaca 177  Q
    |||||||||||||| |||||||||||||||| ||| |||||    
T  34304746 aaatgatatttgtacaactattttttgacaatttttagaca 34304706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 48395245 - 48395285
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||| ||| | ||||||||||||||    
T  48395245 aaagagaaatgatatttgtacaaccactttttgacaacttt 48395285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 34428156 - 34428203
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||    
T  34428156 aaaagagaaatgatatttgtacaactattttttgacaacttttagaca 34428203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 29803222 - 29803262
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  29803222 aaagagaaatgatatttgtacaactattttttgacaacttt 29803262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 36572688 - 36572728
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  36572688 aaagagaaatgatatttgtataactattttgtgacaacttt 36572728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 172
Target Start/End: Original strand, 14206395 - 14206438
Alignment:
Q  129 aaaaagagaaatgatatttgtataactattttttgacaactttc 172  Q
    |||||||||||||||||||||| ||| |||||||||||||||||    
T  14206395 aaaaagagaaatgatatttgtacaaccattttttgacaactttc 14206438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 19844384 - 19844343
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||||| ||||||||||||| ||||||    
T  19844384 aaaagagaaatgatatttgtacaactattttttgataacttt 19844343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 36548452 - 36548408
Alignment:
Q  133 agagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||||    
T  36548452 agagaaatgatatttgtataaccattttgtgacaactttctgaca 36548408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 171
Target Start/End: Complemental strand, 32872971 - 32872932
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  32872971 aagagaaatgatatttgaacaactattttttgacaacttt 32872932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 3960245 - 3960203
Alignment:
Q  129 aaaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||| ||||||||||||  ||||||||||||||||    
T  3960245 aaaaagagaaatcatatttgtataatcattttttgacaacttt 3960203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 5996664 - 5996710
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    |||||||||||||||||||| ||||||||||| |||| ||| |||||    
T  5996664 aaagagaaatgatatttgtacaactattttttaacaatttttagaca 5996710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 171
Target Start/End: Complemental strand, 25561082 - 25561048
Alignment:
Q  137 aaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||||||||| ||||||||    
T  25561082 aaatgatatttgtataactattttttaacaacttt 25561048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 38919859 - 38919901
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||||||||||||||||||| ||||||||||  |||||||||    
T  38919859 aaaagagaaatgatatttgtacaactatttttgtacaactttc 38919901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 42446363 - 42446325
Alignment:
Q  133 agagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  42446363 agagaaatgatatttgaacaactattttttgacaacttt 42446325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 125088 - 125129
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||    
T  125088 aaaagagaaatgatatttgtacaactactttgtgacaacttt 125129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 372787 - 372742
Alignment:
Q  127 ataaaaagagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||||||||||||||| |||||| ||| ||||| |||||||||||    
T  372787 ataaaaagagaaatgatttttgtacaaccattttgtgacaactttc 372742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 2629818 - 2629855
Alignment:
Q  134 gagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  2629818 gagaaatgatatttgtacaaccattttttgacaacttt 2629855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 4434478 - 4434515
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaa 167  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  4434478 aaaagagaaatgatatttgtacaaccattttttgacaa 4434515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 11881064 - 11881015
Alignment:
Q  128 taaaaagagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    |||| |||||||||||||||||| || |||||||| |||||||| |||||    
T  11881064 taaatagagaaatgatatttgtacaattattttttaacaacttttagaca 11881015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 31748336 - 31748373
Alignment:
Q  134 gagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  31748336 gagaaatgatatttgtacaactatttttttacaacttt 31748373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 164
Target Start/End: Original strand, 35165676 - 35165709
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttga 164  Q
    |||||||||||||||||||| |||||||||||||    
T  35165676 aaagagaaatgatatttgtacaactattttttga 35165709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 42643281 - 42643244
Alignment:
Q  134 gagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  42643281 gagaaattatatttgaataactattttttgacaacttt 42643244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 14508229 - 14508193
Alignment:
Q  133 agagaaatgatatttgtataactattttttgacaact 169  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  14508229 agagaaatgatatttgtacaactattttgtgacaact 14508193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 20270565 - 20270605
Alignment:
Q  129 aaaaagagaaatgatatttgtataactattttttgacaact 169  Q
    |||||| ||||||||||||||| ||||||||| ||||||||    
T  20270565 aaaaagtgaaatgatatttgtaaaactattttatgacaact 20270605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 45529016 - 45528970
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||    
T  45529016 aaagagaaatgatatttgtacaactattttttgacaacttttagaca 45528970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 50559288 - 50559246
Alignment:
Q  129 aaaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  50559288 aaaaagagaaatgatatttgtacaactattttttgacaacttt 50559246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 171
Target Start/End: Original strand, 44855249 - 44855288
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  44855249 aagagaaatgatatttgtataactattttgtgacaacttt 44855288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 7867787 - 7867745
Alignment:
Q  129 aaaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    
T  7867787 aaaaagagaaatgatatttgtacaactattttgtgacaacttt 7867745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 3282534 - 3282570
Alignment:
Q  135 agaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||| |||||||||||||||||    
T  3282534 agaaatgatatttgtataagtattttttgacaacttt 3282570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 32146060 - 32146020
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  32146060 aaagagaaatgatatttgaacaactattttttgacaacttt 32146020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 36869909 - 36869865
Alignment:
Q  133 agagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    |||||||||||||||||| ||| |||||||||||||||| |||||    
T  36869909 agagaaatgatatttgtacaaccattttttgacaacttttagaca 36869865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 44937217 - 44937257
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  44937217 aagagaaatgatatttgtacaacaattttttgacaactttc 44937257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 172
Target Start/End: Complemental strand, 11056983 - 11056944
Alignment:
Q  133 agagaaatgatatttgtataactattttttgacaactttc 172  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  11056983 agagaaatgatatttgtacaacaattttttgacaactttc 11056944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 168
Target Start/End: Complemental strand, 32575468 - 32575429
Alignment:
Q  129 aaaaagagaaatgatatttgtataactattttttgacaac 168  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  32575468 aaaaagagaaatgatatttgtataaccattttgtgacaac 32575429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 172
Target Start/End: Original strand, 46952944 - 46952987
Alignment:
Q  129 aaaaagagaaatgatatttgtataactattttttgacaactttc 172  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||    
T  46952944 aaaaagagaaatgatatttgtacaaccattttttgataactttc 46952987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 172
Target Start/End: Complemental strand, 50876423 - 50876384
Alignment:
Q  133 agagaaatgatatttgtataactattttttgacaactttc 172  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  50876423 agagaaatgatatttgtacaacaattttttgacaactttc 50876384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 36799397 - 36799435
Alignment:
Q  133 agagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  36799397 agagaaatgatatttgtacaactattttttgataacttt 36799435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 41637352 - 41637314
Alignment:
Q  133 agagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  41637352 agagaagtgatatttgtacaactattttttgacaacttt 41637314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 25188536 - 25188499
Alignment:
Q  134 gagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  25188536 gagaaatgatatttgaacaactattttttgacaacttt 25188499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 34456786 - 34456827
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||| ||||| | ||||||||||||||    
T  34456786 aaaagagaaatgatatttgaataaccactttttgacaacttt 34456827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 37988632 - 37988669
Alignment:
Q  134 gagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  37988632 gagaaatgatatttatataactattttgtgacaacttt 37988669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 53392139 - 53392098
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||    
T  53392139 aaaagagaaataatatttgtacaacaattttttgacaacttt 53392098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 1902002 - 1901954
Alignment:
Q  129 aaaaagagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    |||||||||||||||||||||| ||| | ||| |||||||||| |||||    
T  1902002 aaaaagagaaatgatatttgtacaaccactttgtgacaacttttagaca 1901954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 1911448 - 1911400
Alignment:
Q  129 aaaaagagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    |||||||||||||||||||||| ||| | ||| |||||||||| |||||    
T  1911448 aaaaagagaaatgatatttgtacaaccactttgtgacaacttttagaca 1911400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 8254024 - 8254064
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||| ||| ||||| ||||||||||    
T  8254024 aaagagaaatgatatttgtacaaccattttgtgacaacttt 8254064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 8868871 - 8868915
Alignment:
Q  133 agagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    |||||||||||||||||| ||   |||||||||||||||||||||    
T  8868871 agagaaatgatatttgtacaatctttttttgacaactttcagaca 8868915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 34627955 - 34627916
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||| ||||||||| ||||||||||||||||||||    
T  34627955 aaagagaaat-atatttgtacaactattttttgacaacttt 34627916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 37035611 - 37035659
Alignment:
Q  130 aaaagagaaatgatatttgtataacta-ttttttgacaactttcagaca 177  Q
    |||||| |||||||||||||||||| | ||||||||||||||| |||||    
T  37035611 aaaagataaatgatatttgtataaccatttttttgacaacttttagaca 37035659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 40159912 - 40159872
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||| ||||||||| | ||||||||    
T  40159912 aaagagaaatgatatttgtacaactattttctaacaacttt 40159872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 40499737 - 40499773
Alignment:
Q  135 agaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  40499737 agaaatgatatttgtataattattttatgacaacttt 40499773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 46323177 - 46323149
Alignment:
Q  130 aaaagagaaatgatatttgtataactatt 158  Q
    |||||||||||||||||||||||||||||    
T  46323177 aaaagagaaatgatatttgtataactatt 46323149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 49196693 - 49196733
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||| ||| ||||| ||||||||||    
T  49196693 aaagagaaatgatatttgtacaaccattttgtgacaacttt 49196733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 54134849 - 54134889
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||| ||| ||||||| ||||||||    
T  54134849 aaagagaaatgatatttgtacaaccatttttttacaacttt 54134889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 55344375 - 55344331
Alignment:
Q  126 tataaaaagagaaatgatatttgtataactattttttgacaactt 170  Q
    ||||||||||||||||||||||||| ||| ||||| ||| |||||    
T  55344375 tataaaaagagaaatgatatttgtacaaccattttgtgataactt 55344331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 55361295 - 55361255
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||||||||||||||||| ||| |||| ||||||||||||    
T  55361295 aagagaaatgatatttgtacaaccatttcttgacaactttc 55361255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 42853937 - 42853982
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||    
T  42853937 aagagaaatgatatttgtacaactattttttgacaacttttagaca 42853982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 44272884 - 44272844
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  44272884 aaagagaaatgatatttgtacaactattttttgacaacttt 44272844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 172
Target Start/End: Original strand, 4511820 - 4511863
Alignment:
Q  129 aaaaagagaaatgatatttgtataactattttttgacaactttc 172  Q
    |||||||||||||||||||||||||| ||||| |||||||||||    
T  4511820 aaaaagagaaatgatatttgtataaccattttatgacaactttc 4511863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 33093177 - 33093137
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||||||||||||||||| ||||||||| |||||||||||    
T  33093177 aagagaaatgatatttgtacaactattttgtgacaactttc 33093137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 4974111 - 4974149
Alignment:
Q  134 gagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  4974111 gagaaatgatatttgtacaactattttttaacaactttc 4974149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 18874995 - 18874950
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    |||||||||||||||||||| ||| |||||||||||||||| |||||    
T  18874995 aaagagaaatgatatttgtacaac-attttttgacaacttttagaca 18874950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 167
Target Start/End: Original strand, 23667870 - 23667908
Alignment:
Q  129 aaaaagagaaatgatatttgtataactattttttgacaa 167  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  23667870 aaaaagagaaatgatattcgtataattattttttgacaa 23667908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 35017152 - 35017190
Alignment:
Q  133 agagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  35017152 agagaaatgatatttgtacaactattttgtgacaacttt 35017190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 47014938 - 47014976
Alignment:
Q  133 agagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  47014938 agagaaatgatatttgtacaactattttgtgacaacttt 47014976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 3316346 - 3316387
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||| |||| ||||| ||||||||||||||||    
T  3316346 aaaagagaaatgatttttgaataaccattttttgacaacttt 3316387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 167
Target Start/End: Complemental strand, 9776403 - 9776370
Alignment:
Q  134 gagaaatgatatttgtataactattttttgacaa 167  Q
    ||||||||||||||||| ||||||||||||||||    
T  9776403 gagaaatgatatttgtacaactattttttgacaa 9776370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 23220335 - 23220372
Alignment:
Q  134 gagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  23220335 gagaaatgatatttgtacaaccattttttgacaacttt 23220372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 33278671 - 33278712
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||| | ||||||||| ||||||||||    
T  33278671 aaaagagaaatgatatttgaacaactattttgtgacaacttt 33278712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 33820411 - 33820370
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||||| ||||||||| | ||||||||    
T  33820411 aaaagagaaatgatatttgtacaactattttctaacaacttt 33820370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 37393339 - 37393380
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||||||||||||||||||||| ||||||  ||||||||||    
T  37393339 aaagagaaatgatatttgtataattattttgagacaactttc 37393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 41154048 - 41154085
Alignment:
Q  134 gagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||| || ||||||||||||||||||||    
T  41154048 gagaaatgatatttatacaactattttttgacaacttt 41154085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 1368228 - 1368192
Alignment:
Q  135 agaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  1368228 agaaatgatatttatataactattttatgacaacttt 1368192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 162
Target Start/End: Original strand, 4701533 - 4701561
Alignment:
Q  134 gagaaatgatatttgtataactatttttt 162  Q
    |||||||||||||||||||||||||||||    
T  4701533 gagaaatgatatttgtataactatttttt 4701561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 20760252 - 20760292
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||| || |||||||| ||||||||    
T  20760252 aaagagaaatgatatttgtacaattattttttaacaacttt 20760292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 20766643 - 20766683
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||| || |||||||| ||||||||    
T  20766643 aaagagaaatgatatttgtacaattattttttaacaacttt 20766683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 31413848 - 31413808
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||||||||||||||||| ||||||||||  |||||||||    
T  31413848 aagagaaatgatatttgtacaactatttttgtacaactttc 31413808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 32079121 - 32079153
Alignment:
Q  128 taaaaagagaaatgatatttgtataactatttt 160  Q
    ||||||||||||||||||||||||||| |||||    
T  32079121 taaaaagagaaatgatatttgtataaccatttt 32079153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 32365737 - 32365689
Alignment:
Q  124 aatataaaaagagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||||| | ||||||||||||||||| ||| ||||| |||||||||||    
T  32365737 aatataacatgagaaatgatatttgtacaaccattttgtgacaactttc 32365689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 32621628 - 32621676
Alignment:
Q  124 aatataaaaagagaaatgatatttgtataactattttttgacaactttc 172  Q
    |||||||| |||||||||||||||| | ||| ||||| |||||||||||    
T  32621628 aatataaatagagaaatgatatttgcacaaccattttgtgacaactttc 32621676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 38864810 - 38864770
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||| || |||||| ||||||||||    
T  38864810 aaagagaaatgatatttgtacaattattttgtgacaacttt 38864770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 41262691 - 41262651
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||||||||||||||||| || |||||| |||||||||||    
T  41262691 aagagaaatgatatttgtacaattattttgtgacaactttc 41262651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 42815401 - 42815441
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||| ||||||||| | ||||||||    
T  42815401 aaagagaaatgatatttgtacaactattttgtaacaacttt 42815441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 51255731 - 51255783
Alignment:
Q  119 ccgtcaatataaaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||| ||| | ||||||||||||||||| | ||| ||||||||||||||||    
T  51255731 ccgtcattattataagagaaatgatatttgaacaaccattttttgacaacttt 51255783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 53583210 - 53583162
Alignment:
Q  123 caatataaaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||||||||||| ||| | ||| | ||||||||    
T  53583210 caatataaaaagagaaatgatatttgtacaaccactttctcacaacttt 53583162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 27334847 - 27334895
Alignment:
Q  123 caatataaaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||| ||||||||||||||||||||||| ||||||||| ||||||||||    
T  27334847 caatttaaaaagagaaatgatatttgtacaactattttgtgacaacttt 27334895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 27395587 - 27395635
Alignment:
Q  123 caatataaaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||| ||||||||||||||||||||||| ||||||||| ||||||||||    
T  27395587 caatttaaaaagagaaatgatatttgtacaactattttgtgacaacttt 27395635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 32644617 - 32644661
Alignment:
Q  128 taaaaagagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||    
T  32644617 taaaatgagaaatgatatttgtacaactattttttgacaactttc 32644661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 12044330 - 12044375
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    |||||||||||||||| || |||||||||||||||||||| |||||    
T  12044330 aagagaaatgatatttatacaactattttttgacaacttttagaca 12044375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 12280440 - 12280477
Alignment:
Q  134 gagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  12280440 gagaaatgatatttgtataactattttctgacaacttt 12280477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 9083135 - 9083099
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaa 167  Q
    |||||||||||||||||||||||||||||||| ||||    
T  9083135 aaagagaaatgatatttgtataactattttttaacaa 9083099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 17551461 - 17551413
Alignment:
Q  123 caatataaaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||| |||||||||||||||||||| | ||| ||||||||||||||||    
T  17551461 caataaaaaaagagaaatgatatttgaacaaccattttttgacaacttt 17551413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 30767340 - 30767300
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  30767340 aaagagaaatgatatttgtttaactattttgtgacaacttt 30767300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 32729883 - 32729926
Alignment:
Q  128 taaaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||||    
T  32729883 taaaaagagaaatgatatttgtacaaccattttctgacaacttt 32729926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 12441534 - 12441576
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||||||||||||||||||| ||||| ||| |||||||||||    
T  12441534 aaaagagaaatgatatttgtacaactactttgtgacaactttc 12441576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 17902764 - 17902726
Alignment:
Q  133 agagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  17902764 agagaaatgatatttgtataactaatttatgacaacttt 17902726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 958733 - 958696
Alignment:
Q  134 gagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  958733 gagaaatgatatttgtataattattttttaacaacttt 958696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 9189017 - 9188972
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    ||||||||||||||||||| ||| ||||||| |||||||| |||||    
T  9189017 aagagaaatgatatttgtacaaccattttttaacaacttttagaca 9188972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 12280706 - 12280743
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaa 167  Q
    |||||||||||||||||| || ||||||||||||||||    
T  12280706 aaaagagaaatgatatttatacaactattttttgacaa 12280743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 13658326 - 13658367
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||| | |||| ||||||||||||||||    
T  13658326 aaaagagaaatgatatttttctaacaattttttgacaacttt 13658367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 2060696 - 2060656
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||| ||||| ||||| ||||||||||    
T  2060696 aaagagaaatgatatttgaataaccattttatgacaacttt 2060656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 3180066 - 3180026
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||| ||  ||||||||||||||||    
T  3180066 aaagagaaatgatatttgtacaatcattttttgacaacttt 3180026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 3339573 - 3339533
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||| ||| ||||| ||||||||||    
T  3339573 aaagagaaatgatatttgtacaaccattttgtgacaacttt 3339533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 11743058 - 11743010
Alignment:
Q  129 aaaaagagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    |||||||||||| ||||||||| ||||||||||||| || ||| |||||    
T  11743058 aaaaagagaaataatatttgtacaactattttttgataatttttagaca 11743010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 18610767 - 18610810
Alignment:
Q  128 taaaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||    
T  18610767 taaaaagagaaatgatatttgtacaactattttgtgacaacttt 18610810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 171
Target Start/End: Complemental strand, 35883680 - 35883641
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  35883680 aagagaaatgatatttgtacaattattttttgacaacttt 35883641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 171
Target Start/End: Complemental strand, 37843505 - 37843466
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  37843505 aagagaaatgatatttgtacaactactttttgacaacttt 37843466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 48872371 - 48872422
Alignment:
Q  126 tataaaaagagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    ||||||||||||||||||||||||| ||| | ||| |||||||||| |||||    
T  48872371 tataaaaagagaaatgatatttgtacaaccactttatgacaacttttagaca 48872422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 3697215 - 3697177
Alignment:
Q  133 agagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  3697215 agagaaatgatatttgtacaactatttgttgacaacttt 3697177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 43612144 - 43612102
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||||||||||||||||||| ||| ||||| |||||||||||    
T  43612144 aaaagagaaatgatatttgtacaaccattttatgacaactttc 43612102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 48872088 - 48872050
Alignment:
Q  134 gagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  48872088 gagaaatgatatttgtacaaccattttttgacaactttc 48872050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 16987445 - 16987490
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    ||||||||||||||||||| || |||||||| |||||||| |||||    
T  16987445 aagagaaatgatatttgtacaattattttttaacaacttttagaca 16987490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 25989061 - 25989012
Alignment:
Q  128 taaaaagagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    |||| |||||||||||||||||| ||| ||||||| |||||||| |||||    
T  25989061 taaatagagaaatgatatttgtacaaccattttttaacaacttttagaca 25989012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 40596117 - 40596076
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaactttc 172  Q
    |||||||||||||||||||| ||| ||||| |||||||||||    
T  40596117 aaagagaaatgatatttgtacaaccattttgtgacaactttc 40596076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 42256456 - 42256497
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||    
T  42256456 aaaagagaaatgatatttgtacaaccattttgtgacaacttt 42256497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 7078574 - 7078534
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||| | ||||||| ||||||||||    
T  7078574 aaagagaaatgatatttgtacatctattttgtgacaacttt 7078534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 9011642 - 9011682
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||| ||| ||||| ||||||||||    
T  9011642 aaagagaaatgatatttgtacaaccattttgtgacaacttt 9011682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 9897632 - 9897596
Alignment:
Q  135 agaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  9897632 agaaatgatatttgtagaaccattttttgacaacttt 9897596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 27742610 - 27742654
Alignment:
Q  127 ataaaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||||| | ||| | ||||||||||||||    
T  27742610 ataaaaagagaaatgatatttgaacaaccactttttgacaacttt 27742654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 45272222 - 45272182
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||||||||||||||||| ||| | |||||||||||||||    
T  45272222 aagagaaatgatatttgtacaaccactttttgacaactttc 45272182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 48983742 - 48983702
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||| | ||| ||||||||||||||||    
T  48983742 aaagagaaatgatatttgaacaaccattttttgacaacttt 48983702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 49805009 - 49804969
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||| |||| |||||||||||||| ||||||||||||||    
T  49805009 aaagaggaatggtatttgtataactactttttgacaacttt 49804969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 13885770 - 13885811
Alignment:
Q  129 aaaaagagaaatgatatttgtataactattttttgacaactt 170  Q
    |||||||||||||||||||||||||| | |||||||||||||    
T  13885770 aaaaagagaaatgatatttgtataaccaatttttgacaactt 13885811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 36497659 - 36497704
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    ||||||||||||||||||| ||||||||| |||||||||| |||||    
T  36497659 aagagaaatgatatttgtacaactattttgtgacaacttttagaca 36497704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 41955925 - 41955966
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||||||||| ||||||| ||||||||    
T  41955925 aaaagagaaatgatatttgtataaccattttttaacaacttt 41955966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 14233706 - 14233666
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||||||||||||||||| ||||||||||| |||||||||    
T  14233706 aagagaaatgatatttgtacaactatttttttacaactttc 14233666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 37392190 - 37392150
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  37392190 aagagaaatgatatttgtacaaccattttttgacaactttc 37392150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 171
Target Start/End: Original strand, 13592764 - 13592803
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  13592764 aagagaaatgatatttgtacacctattttttgacaacttt 13592803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 30170806 - 30170763
Alignment:
Q  128 taaaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||||||| ||| | ||||||||||||||    
T  30170806 taaaaagagaaatgatatttgtacaaccactttttgacaacttt 30170763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 172
Target Start/End: Complemental strand, 40413414 - 40413371
Alignment:
Q  129 aaaaagagaaatgatatttgtataactattttttgacaactttc 172  Q
    |||||||||||||||||||||| || |||||| |||||||||||    
T  40413414 aaaaagagaaatgatatttgtacaattattttgtgacaactttc 40413371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 5772047 - 5772006
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||| | ||| ||||||||||||||||    
T  5772047 aaaagagaaatgatatttgaacaaccattttttgacaacttt 5772006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 7678728 - 7678769
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||||| ||| | ||||||||||||||    
T  7678728 aaaagagaaatgatatttgtacaaccactttttgacaacttt 7678769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 23265414 - 23265377
Alignment:
Q  134 gagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  23265414 gagaaatgatatttgtataactatttttatacaacttt 23265377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 45101388 - 45101433
Alignment:
Q  126 tataaaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||||||||| ||| | ||| ||||||||||    
T  45101388 tataaaaagagaaatgatatttgtacaaccactttgtgacaacttt 45101433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 37562213 - 37562169
Alignment:
Q  133 agagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    |||||||||||||||||| ||||||| | |||||||||| |||||    
T  37562213 agagaaatgatatttgtacaactattatgtgacaacttttagaca 37562169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 40380278 - 40380318
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||| | ||||||| ||||||||||    
T  40380278 aaagagaaatgatatttgtacatctattttatgacaacttt 40380318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 45108727 - 45108691
Alignment:
Q  135 agaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||| | ||||||||||||||||||    
T  45108727 agaaatgatatttgtacatctattttttgacaacttt 45108691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 18531597 - 18531634
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaa 167  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  18531597 aaaagagaaatgatatttgtacaactattttttgacaa 18531634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 22303203 - 22303240
Alignment:
Q  134 gagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  22303203 gagaaatgatatttgtacaactattttttgacaacttt 22303240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 4138247 - 4138207
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||||||||||||||||||||||||||| | |||||||||    
T  4138247 aagagaaatgatatttgtataactattttctaacaactttc 4138207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 172
Target Start/End: Complemental strand, 4263928 - 4263886
Alignment:
Q  129 aaaaagagaaatgatatttgtataactattttttgacaactttc 172  Q
    |||||||||||||||||||||| ||| |||||||||||||||||    
T  4263928 aaaaagagaaatgatatttgtacaac-attttttgacaactttc 4263886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 171
Target Start/End: Original strand, 29168723 - 29168762
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||| ||| ||||||||||||||||    
T  29168723 aagagaaatgatatttgtacaaccattttttgacaacttt 29168762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 8352832 - 8352878
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    |||||||||||||||||||| ||||||||||| | |||||| |||||    
T  8352832 aaagagaaatgatatttgtacaactattttttaataacttttagaca 8352878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 18510674 - 18510712
Alignment:
Q  133 agagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  18510674 agagaaatgatatttgaacaactattttttgacaacttt 18510712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 1052569 - 1052524
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaactttcagaca 177  Q
    ||||||||||||||||||| ||| ||||||| |||||||| |||||    
T  1052569 aagagaaatgatatttgtacaaccattttttaacaacttttagaca 1052524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 4738651 - 4738606
Alignment:
Q  126 tataaaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||||||||| ||| | ||| ||||||||||    
T  4738651 tataaaaagagaaatgatatttgtacaaccactttgtgacaacttt 4738606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 15124007 - 15123970
Alignment:
Q  134 gagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  15124007 gagaaatgatatttgtacaaccattttttgacaacttt 15123970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 31629604 - 31629641
Alignment:
Q  134 gagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  31629604 gagaaatgatatttgtacaactactttttgacaacttt 31629641  T

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Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 694278 - 694318
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||||||||||||||||| ||| |||||||||||| ||||    
T  694278 aagagaaatgatatttgtacaaccattttttgacaattttc 694318  T

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Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 18423838 - 18423802
Alignment:
Q  128 taaaaagagaaatgatatttgtataactattttttga 164  Q
    ||||||||||||||||||||||| | |||||||||||    
T  18423838 taaaaagagaaatgatatttgtacatctattttttga 18423802  T

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Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 29795445 - 29795485
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||||||||||||||||| ||| ||||| |||||||||||    
T  29795445 aagagaaatgatatttgtacaaccattttgtgacaactttc 29795485  T

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Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 40635714 - 40635750
Alignment:
Q  135 agaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  40635714 agaaatgatatttgaataactattttttaacaacttt 40635750  T

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Target: scaffold0054 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 31662 - 31622
Alignment:
Q  132 aagagaaatgatatttgtataactattttttgacaactttc 172  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  31662 aagagaaatgatatttgtacaaccattttttgacaactttc 31622  T

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Target: scaffold0662 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 1077 - 1115
Alignment:
Q  133 agagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  1077 agagaaatgatatttgtacaactattttgtgacaacttt 1115  T

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Target: scaffold0041 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 171
Target Start/End: Original strand, 34411 - 34445
Alignment:
Q  137 aaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||| ||||||||||||||||||||    
T  34411 aaatgatatttgtacaactattttttgacaacttt 34445  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 17999 - 18041
Alignment:
Q  129 aaaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||| | || |||||||||||||||||    
T  17999 aaaaagagaaatgatatttggacaattattttttgacaacttt 18041  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 19762 - 19725
Alignment:
Q  134 gagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  19762 gagaaatgatatttgtacaactattttgtgacaacttt 19725  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 204520 - 204479
Alignment:
Q  130 aaaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    ||||||||||||||||||||| | ||||||| ||||||||||    
T  204520 aaaagagaaatgatatttgtacatctattttctgacaacttt 204479  T

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Target: scaffold0514 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 1570 - 1530
Alignment:
Q  131 aaagagaaatgatatttgtataactattttttgacaacttt 171  Q
    |||||||||||||||||||||||| | ||| ||||||||||    
T  1570 aaagagaaatgatatttgtataaccaatttgtgacaacttt 1530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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