View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18051_high_15 (Length: 261)
Name: NF18051_high_15
Description: NF18051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18051_high_15 |
 | |
|
| [»] scaffold0491 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 2338383 - 2338619
Alignment:
| Q |
1 |
gtgagtgaaaagtgtgatgtatatagctttggagtagtggcacttgaaactttaataggaagacaccctggtgatatactgtcatcacttcagttagcat |
100 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
2338383 |
gtgagtgaaaagtgcgatgtatatagttttggagtagtggcacttgaaactttaatgggaagacaccctggtgatatactatcatagcttcagttagcat |
2338482 |
T |
|
| Q |
101 |
cgactcaaggcatgaaattatgtgaagtattagaccagcgtctcccacttccaaataatgtgaaggttttacttgacataattcgtgttgctgtagtcgc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |
|
|
| T |
2338483 |
cgactcaaggcatgaaattatgtgaagtattagaccagcgtctcccacttccaaataatgtgaaggttttacttgacataattcgtgttgccgtagtagc |
2338582 |
T |
|
| Q |
201 |
atttgcatgcttaaatctcaaccctcgctctcgacca |
237 |
Q |
| |
|
||||| ||||||||||||||||||| || |||||||| |
|
|
| T |
2338583 |
atttggatgcttaaatctcaacccttgcgctcgacca |
2338619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 2330527 - 2330763
Alignment:
| Q |
1 |
gtgagtgaaaagtgtgatgtatatagctttggagtagtggcacttgaaactttaataggaagacaccctggtgatatactgtcatcacttcagttagcat |
100 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2330527 |
gtgagtgaaaagtgcgatgtatatagttttggagttgtggcacttgaaactttaatgggaagacaccctggtgatatactgtcatcacttcagttagcat |
2330626 |
T |
|
| Q |
101 |
cgactcaaggcatgaaattatgtgaagtattagaccagcgtctcccacttccaaataatgtgaaggttttacttgacataattcgtgttgctgtagtcgc |
200 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| || |
|
|
| T |
2330627 |
cgactcaagggatgaaattatgtgaagtattagaccaacgtctcccacttccaaataatgtaaaggttttactggacataattcgtgttgccgtagtagc |
2330726 |
T |
|
| Q |
201 |
atttgcatgcttaaatctcaaccctcgctctcgacca |
237 |
Q |
| |
|
||||| ||||||||||||||||||| || |||||||| |
|
|
| T |
2330727 |
atttggatgcttaaatctcaacccttgcgctcgacca |
2330763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 2321913 - 2322162
Alignment:
| Q |
1 |
gtgagtgaaaagtgtgatgtatatagctttggagtagtggcacttgaaactttaataggaagacaccctggtgatatactgtcatcacttcagttagcat |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2321913 |
gtgagtgaaaagtgcgatgtatatagctttggagttgtggcacttgaaactttaatgggaagacaccctggtgatatactgtcatcacttcagttagcat |
2322012 |
T |
|
| Q |
101 |
cgactcaaggcatgaaattatgtgaagtattagaccagcgtctcccacttccaaataatgtgaaggttttacttgacataattcgtgttgctgtagtcgc |
200 |
Q |
| |
|
| ||||||||||| || |||||||||||||||||||| ||||| | |||||| |||||||||| ||||||||||||||||||||||||||| | | || |
|
|
| T |
2322013 |
caactcaaggcattaagttatgtgaagtattagaccaacgtcttctacttccgaataatgtgatggttttacttgacataattcgtgttgccacaatagc |
2322112 |
T |
|
| Q |
201 |
atttgcatgcttaaatctcaaccctcgctctcgaccagaaatgaagtgtg |
250 |
Q |
| |
|
|||||| |||||||||||||| ||| |||||||||| |||||| |||| |
|
|
| T |
2322113 |
atttgcttgcttaaatctcaatcctttctctcgaccaacaatgaaatgtg |
2322162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 3954713 - 3954500
Alignment:
| Q |
4 |
agtgaaaagtgtgatgtatatagctttggagtagtggcacttgaaactttaataggaagacaccctggtgatatactgtcatcacttcagttagcatcga |
103 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||||||||||||| |||| | |||||| | || | || ||| ||||||||||||| ||| |||| | |
|
|
| T |
3954713 |
agtgaaaaatgtgatgtatatagttttggagtagtggcacttgaaattttagtgggaagatatcccgaggaaatattgtcatcacttcaattaacatcaa |
3954614 |
T |
|
| Q |
104 |
ctcaaggcatgaaattatgtgaagtattagaccagcgtctcccacttccaaataatgtgaaggttttacttgacataattcgtgttgctgtagtcgcatt |
203 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| ||||| |||||| |||| |
|
|
| T |
3954613 |
ctcaagacatcaaattatgtgaagtattagaccaacgtctcccacttccaaatgatgtgaaagttttacttgacataattcatgttgttgtagtagcatc |
3954514 |
T |
|
| Q |
204 |
tgcatgcttaaatc |
217 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
3954513 |
tgcatgcttaaatc |
3954500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 1089254 - 1089490
Alignment:
| Q |
1 |
gtgagtgaaaagtgtgatgtatatagctttggagtagtggcacttgaaactttaataggaagacaccctggtgatatactgtcatcacttcagttagcat |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||| | ||||| ||||||| |||||| ||||||| ||||| | | ||| |
|
|
| T |
1089254 |
gtgagtgaaaagtgtgatgtatatagttttggtgtagtggcacttgaaactttagttggaaggcaccctgaagatatattgtcatcccttcaatcaacat |
1089353 |
T |
|
| Q |
101 |
cgactcaaggcatgaaattatgtgaagtattagaccagcgtctcccacttccaaataatgtgaaggttttacttgacataattcgtgttgctgtagtcgc |
200 |
Q |
| |
|
|||| ||| | || ||||||||| ||||||||||||| ||||| |||||||||| ||| | | | | | | ||||||||||| |||||| || || || |
|
|
| T |
1089354 |
cgacacaaagtatcaaattatgtcaagtattagaccaacgtcttccacttccaagtaaagaaatagctatccatgacataattcatgttgccgtggtagc |
1089453 |
T |
|
| Q |
201 |
atttgcatgcttaaatctcaaccctcgctctcgacca |
237 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
1089454 |
atttgcatgcttaaatctcaatcctcgttctcgacca |
1089490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 1597007 - 1597220
Alignment:
| Q |
1 |
gtgagtgaaaagtgtgatgtatatagctttggagtagtggcacttgaaactttaataggaagacaccctggtgatatactgtcatcacttcagttagcat |
100 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| || |||||||||||||||||| | ||||| |||||||| ||| || ||||||||||||| | | ||| |
|
|
| T |
1597007 |
gtgaatgaaaagtgtgatgtatatagctttggcgtggtggcacttgaaactttagttggaaggcaccctggggatttattgtcatcacttcaatcatcat |
1597106 |
T |
|
| Q |
101 |
cgactcaaggcatgaaattatgtgaagtattagaccagcgtctcccacttccaaataatgtgaaggttttacttgacataattcgtgttgctgtagtcgc |
200 |
Q |
| |
|
|||| ||| | | ||| ||||| ||||||||||||| ||||| |||||||||||||||| || ||| ||| | ||||||||| |||||| |||| || |
|
|
| T |
1597107 |
cgacacaaagtctcaaactatgtcaagtattagaccaacgtcttccacttccaaataatgagatagttatacgtcacataattcatgttgccatagttgc |
1597206 |
T |
|
| Q |
201 |
atttgcatgcttaa |
214 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
1597207 |
atttgcatgcttaa |
1597220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 1550144 - 1549892
Alignment:
| Q |
1 |
gtgagtgaaaagtgtgatgtatatagctttggagtagtggcacttgaaactttaataggaagacaccctggtgatatactgtcatcacttcagttagcat |
100 |
Q |
| |
|
|||| ||| ||||||||||||||||| ||||| ||||||||||||||||| ||| | |||| ||||||| |||||| || |||||||||| | ||| |
|
|
| T |
1550144 |
gtgaatgagaagtgtgatgtatatagttttggtgtagtggcacttgaaacattagttggaaagcaccctgaggatatattggcatcacttcaatctccat |
1550045 |
T |
|
| Q |
101 |
cgactcaaggcatgaaattatgtgaagtattagaccagcgtctcccacttccaaataatgtgaaggttttacttgacataattcgtgttgctgtagtcgc |
200 |
Q |
| |
|
|||| ||| | || ||||||||| ||||||||||||| ||| | |||||||||||||||| | ||| ||| ||||||||||| ||||| || || || |
|
|
| T |
1550044 |
cgacacaaagtatcaaattatgtcaagtattagaccaacgtattccacttccaaataatgaaatagttatacgtgacataattcaagttgccgtggtagc |
1549945 |
T |
|
| Q |
201 |
atttgcatgcttaaatctcaaccctcgctctcgaccagaaatgaagtgtgtgt |
253 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||||| |||||| ||||||| |
|
|
| T |
1549944 |
atttgcatgtttaaatctcaatcctcgctctcgaccaacaatgaaatgtgtgt |
1549892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 1604981 - 1605217
Alignment:
| Q |
1 |
gtgagtgaaaagtgtgatgtatatagctttggagtagtggcacttgaaactttaataggaagacaccctggtgatatactgtcatcacttcagttagcat |
100 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||| ||||||||||||||| ||||| | ||||| ||||||| |||||| ||||||||||||| | | | |
|
|
| T |
1604981 |
gtgaatgaaaagtgtgatgtatatagttttggtgtagtggcacttgaagctttagttggaaggcaccctgaggatatattgtcatcacttcaatcaaatt |
1605080 |
T |
|
| Q |
101 |
cgactcaaggcatgaaattatgtgaagtattagaccagcgtctcccacttccaaataatg-tgaaggttttacttgacataattcgtgttgctgtagtcg |
199 |
Q |
| |
|
|||| ||| | | ||| ||||| ||||||||||||||||||| |||||||||||||| | || | ||| ||| ||||||||||| |||||| || || | |
|
|
| T |
1605081 |
cgacacaaagtgtcaaactatgtcaagtattagaccagcgtcttccacttccaaataacgatgta-gttatacgtgacataattcatgttgccgtggttg |
1605179 |
T |
|
| Q |
200 |
catttgcatgcttaaatctcaaccctcgctctcgacca |
237 |
Q |
| |
|
||||||||||||||||| |||| ||||| ||||||||| |
|
|
| T |
1605180 |
catttgcatgcttaaatatcaatcctcgttctcgacca |
1605217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 1556964 - 1556728
Alignment:
| Q |
1 |
gtgagtgaaaagtgtgatgtatatagctttggagtagtggcacttgaaactttaataggaagacaccctggtgatatactgtcatcacttcagttagcat |
100 |
Q |
| |
|
|||| |||||||||||||| |||||| ||||| || || ||||||||||||||| | ||||| || ||||| ||| |||||||||||||||||| | ||| |
|
|
| T |
1556964 |
gtgaatgaaaagtgtgatgcatatagttttggtgttgtagcacttgaaactttagttggaaggcatcctggagatttactgtcatcacttcagtcaacat |
1556865 |
T |
|
| Q |
101 |
cgactcaaggcatgaaattatgtgaagtattagaccagcgtctcccacttccaaataatgtgaaggttttacttgacataattcgtgttgctgtagtcgc |
200 |
Q |
| |
|
|||| | | | | ||| ||||| ||||||||||||||||||| |||||||||||||||| | ||| ||| ||||||||||| ||||| || || || |
|
|
| T |
1556864 |
cgacacgaagtgtcaaactatgtcaagtattagaccagcgtcttccacttccaaataatgacatagttatacgtgacataattcatgttgtcgtggttgc |
1556765 |
T |
|
| Q |
201 |
atttgcatgcttaaatctcaaccctcgctctcgacca |
237 |
Q |
| |
|
|||||||||||||||| |||| |||| ||||||||| |
|
|
| T |
1556764 |
atttgcatgcttaaatatcaatcctcattctcgacca |
1556728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 1106594 - 1106830
Alignment:
| Q |
1 |
gtgagtgaaaagtgtgatgtatatagctttggagtagtggcacttgaaactttaataggaagacaccctggtgatatactgtcatcacttcagttagcat |
100 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||| ||||||||||||||| ||||| | ||||| ||||||| |||||| ||||||||||||| | | | |
|
|
| T |
1106594 |
gtgaatgaaaagtgtgatgtatatagttttggtgtagtggcacttgaagctttagttggaaggcaccctgaggatatattgtcatcacttcaatcaaatt |
1106693 |
T |
|
| Q |
101 |
cgactcaaggcatgaaattatgtgaagtattagaccagcgtctcccacttccaaataatgtgaaggttttacttgacataattcgtgttgctgtagtcgc |
200 |
Q |
| |
|
|| | ||| | | ||| ||||| ||||||||||||||||||| |||||||||||||| | ||| ||| ||||||||||| |||||| || || || |
|
|
| T |
1106694 |
cgccacaaagtgtcaaactatgtcaagtattagaccagcgtcttccacttccaaataacgacgtagttatacgtgacataattcatgttgccgtggttgc |
1106793 |
T |
|
| Q |
201 |
atttgcatgcttaaatctcaaccctcgctctcgacca |
237 |
Q |
| |
|
|||||||||||||||| |||| ||||| ||||||||| |
|
|
| T |
1106794 |
atttgcatgcttaaatatcaatcctcgttctcgacca |
1106830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 3853238 - 3853449
Alignment:
| Q |
4 |
agtgaaaagtgtgatgtatatagctttggagtagtggcacttgaaactttaataggaagacaccctggtgatatactgtcatcacttcagttagcatcga |
103 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||| |||||||||||| |||| | |||||||| |||| || ||| ||||||||||||| ||| |||| | |
|
|
| T |
3853238 |
agtgaaaagtgtgatgtatatagttttggggtaatggcacttgaaattttattgggaagacatcctgaggaaatattgtcatcacttcaattaacatcaa |
3853337 |
T |
|
| Q |
104 |
ctcaaggcatgaaattatgtgaagtattagaccagcgtctcccacttccaaataatgtgaaggttttacttgacataattcgtgttgctgtagtcgcatt |
203 |
Q |
| |
|
|||||| ||| ||| || |||||||| ||||| | ||||||| || ||||||||||| || ||||| |||| |||| |||| |||||||| || ||||| |
|
|
| T |
3853338 |
ctcaagacatcaaactacgtgaagtactagacaaacgtctccaacgtccaaataatgagatggtttcacttcacattattcaggttgctgtcgtagcatt |
3853437 |
T |
|
| Q |
204 |
tgcatgcttaaa |
215 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
3853438 |
tgcatgtttaaa |
3853449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 21 - 251
Target Start/End: Complemental strand, 1564200 - 1563970
Alignment:
| Q |
21 |
atatagctttggagtagtggcacttgaaactttaataggaagacaccctggtgatatactgtcatcacttcagttagcatcgactcaaggcatgaaatta |
120 |
Q |
| |
|
|||||| ||||| |||||| |||||||||||||| | ||||| | ||||| |||||| ||||||||||||| | | ||||||| ||| | || |||||| |
|
|
| T |
1564200 |
atatagttttggtgtagtgacacttgaaactttagttggaaggaaacctggagatatattgtcatcacttcaatcaacatcgacacaaagtatcaaatta |
1564101 |
T |
|
| Q |
121 |
tgtgaagtattagaccagcgtctcccacttccaaataatgtgaaggttttacttgacataattcgtgttgctgtagtcgcatttgcatgcttaaatctca |
220 |
Q |
| |
|
||| ||||||||||||| ||||| | |||||||||||| | | ||| ||| ||||||||||| |||||| || || ||||||||| | |||||||||| |
|
|
| T |
1564100 |
tgtcaagtattagaccaacgtcttcgacttccaaataacgaaatagttatacgtgacataattcatgttgccgtggtagcatttgcaagtttaaatctca |
1564001 |
T |
|
| Q |
221 |
accctcgctctcgaccagaaatgaagtgtgt |
251 |
Q |
| |
|
| ||||| ||||||||| |||||| ||||| |
|
|
| T |
1564000 |
atcctcgttctcgaccaacaatgaaatgtgt |
1563970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 1540919 - 1540683
Alignment:
| Q |
1 |
gtgagtgaaaagtgtgatgtatatagctttggagtagtggcacttgaaactttaataggaagacaccctggtgatatactgtcatcacttcagttagcat |
100 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||| |||||| |||||||||||||| | ||||| |||||||| ||| || ||||||||||||| | | ||| |
|
|
| T |
1540919 |
gtgaatgaaaagtgtgatgtatatagttttggtgtagtgacacttgaaactttagttggaaggcaccctggggatttattgtcatcacttcaatcaacat |
1540820 |
T |
|
| Q |
101 |
cgactcaaggcatgaaattatgtgaagtattagaccagcgtctcccacttccaaataatgtgaaggttttacttgacataattcgtgttgctgtagtcgc |
200 |
Q |
| |
|
|||| | | | ||| || || ||||||||||||| ||||| |||||||||||||||| | ||| ||| ||||||||||| |||| | | || || |
|
|
| T |
1540819 |
cgacaagaagtgtcaaactacgtcaagtattagaccaacgtcttccacttccaaataatgacatagttatacgtgacataattcatgtttccctggtagc |
1540720 |
T |
|
| Q |
201 |
atttgcatgcttaaatctcaaccctcgctctcgacca |
237 |
Q |
| |
|
|||||||||||||||| ||| ||||| ||||||||| |
|
|
| T |
1540719 |
atttgcatgcttaaatggcaatcctcgttctcgacca |
1540683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 237
Target Start/End: Original strand, 2335141 - 2335308
Alignment:
| Q |
73 |
gatatactgtcatcacttcagttagcatcgactcaaggcatgaaatta---tgtgaagtattagaccagcgtctcccacttccaaataatgtgaaggttt |
169 |
Q |
| |
|
|||||| ||||||||||||| || ||||| |||| |||||||||||| |||||||||||||| || | || || | ||||||||||||||| ||||| |
|
|
| T |
2335141 |
gatatattgtcatcacttcaatttgcatcaactctcggcatgaaattattatgtgaagtattagaacaacatcccctatttccaaataatgtgatggttt |
2335240 |
T |
|
| Q |
170 |
tacttgacataattcgtgttgctgtagtcgcatttgcatgcttaaatctcaaccctcgctctcgacca |
237 |
Q |
| |
|
||||||||||||||||||||| | || ||||||||||||||||||||||| ||| ||||| ||||| |
|
|
| T |
2335241 |
tacttgacataattcgtgttgtcattgtagcatttgcatgcttaaatctcaatccttgctcttgacca |
2335308 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 113 - 253
Target Start/End: Original strand, 2326313 - 2326455
Alignment:
| Q |
113 |
tgaaattatgtgaagtattagaccagcgtctcccacttccaaataatgtgaaggttttacttgac--ataattcgtgttgctgtagtcgcatttgcatgc |
210 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||||||| |||||| ||| ||||||||||||| |||||||||||||| |||| |||||||||| | |
|
|
| T |
2326313 |
tgaagttatgtgaagtattagaccaacgtctcccacttctgaataatatgatggttttacttgacatataattcgtgttgccttagtagcatttgcatac |
2326412 |
T |
|
| Q |
211 |
ttaaatctcaaccctcgctctcgaccagaaatgaagtgtgtgt |
253 |
Q |
| |
|
||||||||||| ||| |||||||||| |||||| ||||||| |
|
|
| T |
2326413 |
ttaaatctcaatcctttctctcgaccaacaatgaaatgtgtgt |
2326455 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 100; Significance: 1e-49; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 253
Target Start/End: Complemental strand, 18738794 - 18738547
Alignment:
| Q |
6 |
tgaaaagtgtgatgtatatagctttggagtagtggcacttgaaactttaataggaagacaccctggtgatatactgtcatcacttcagttagcatcgact |
105 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||||||||||||||| | ||||| |||||||| ||| || ||||||||||||| | | ||||||| |
|
|
| T |
18738794 |
tgaaaagtgtgatgtatatagttttggtgtagtggcacttgaaactttagttggaaggcaccctggggatttattgtcatcacttcaatcaacatcgaca |
18738695 |
T |
|
| Q |
106 |
caaggcatgaaattatgtgaagtattagaccagcgtctcccacttccaaataatgtgaaggttttacttgacataattcgtgttgctgtagtcgcatttg |
205 |
Q |
| |
|
||| | | ||| ||||| ||||||||||||| ||||| |||||||||||||||| | ||| ||| ||||||||||| || ||| || || ||||||| |
|
|
| T |
18738694 |
caaagtctcaaactatgtcaagtattagaccaccgtcttccacttccaaataatgacatagttatacgtgacataattcatgctgccgtggtagcatttg |
18738595 |
T |
|
| Q |
206 |
catgcttaaatctcaaccctcgctctcgaccagaaatgaagtgtgtgt |
253 |
Q |
| |
|
||||||||||| |||| ||||| ||||||||| |||||| ||||||| |
|
|
| T |
18738594 |
catgcttaaatgtcaatcctcgttctcgaccaacaatgaaatgtgtgt |
18738547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 253
Target Start/End: Complemental strand, 18743758 - 18743511
Alignment:
| Q |
6 |
tgaaaagtgtgatgtatatagctttggagtagtggcacttgaaactttaataggaagacaccctggtgatatactgtcatcacttcagttagcatcgact |
105 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||||||||||||||| | ||||| |||||||| ||| || ||||||||||||| | | ||||||| |
|
|
| T |
18743758 |
tgaaaagtgtgatgtatatagttttggtgtagtggcacttgaaactttagttggaaggcaccctggggatttattgtcatcacttcaatcaacatcgaca |
18743659 |
T |
|
| Q |
106 |
caaggcatgaaattatgtgaagtattagaccagcgtctcccacttccaaataatgtgaaggttttacttgacataattcgtgttgctgtagtcgcatttg |
205 |
Q |
| |
|
||| | | ||| ||||| ||||||||||||| ||||| |||||||||||||||| | ||| ||| ||||||||||| || ||| || || ||||||| |
|
|
| T |
18743658 |
caaagtctcaaactatgtcaagtattagaccaccgtcttccacttccaaataatgacatagttatacgtgacataattcatgctgccgtggtagcatttg |
18743559 |
T |
|
| Q |
206 |
catgcttaaatctcaaccctcgctctcgaccagaaatgaagtgtgtgt |
253 |
Q |
| |
|
||||||||||| |||| ||||| ||||||||| |||||| ||||||| |
|
|
| T |
18743558 |
catgcttaaatgtcaatcctcgttctcgaccaacaatgaaatgtgtgt |
18743511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 18748730 - 18748478
Alignment:
| Q |
1 |
gtgagtgaaaagtgtgatgtatatagctttggagtagtggcacttgaaactttaataggaagacaccctggtgatatactgtcatcacttcagttagcat |
100 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||||| ||| || ||||||||||||| | | ||| |
|
|
| T |
18748730 |
gtgaatgaaaagtgtgatgtatatagttttggtgtagtggcacttgaaactttagctggaaggcaccctggggatttattgtcatcacttcaatcaacat |
18748631 |
T |
|
| Q |
101 |
cgactcaaggcatgaaattatgtgaagtattagaccagcgtctcccacttccaaataatgtgaaggttttacttgacataattcgtgttgctgtagtcgc |
200 |
Q |
| |
|
|||| ||| | | ||| ||||| ||||||||||||||||||| |||||||||||||||| | |||| ||| | ||||||||| | |||| || || || |
|
|
| T |
18748630 |
cgacacaaagtgtcaaactatgtcaagtattagaccagcgtcttccacttccaaataatgaaatggttatacgtaacataattcattttgccgttgttgc |
18748531 |
T |
|
| Q |
201 |
atttgcatgcttaaatctcaaccctcgctctcgaccagaaatgaagtgtgtgt |
253 |
Q |
| |
|
||||||||||||||| |||| ||||| ||||||||| |||||| ||||||| |
|
|
| T |
18748530 |
ctttgcatgcttaaatgtcaatcctcgttctcgaccaacaatgaaatgtgtgt |
18748478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 18723078 - 18722826
Alignment:
| Q |
1 |
gtgagtgaaaagtgtgatgtatatagctttggagtagtggcacttgaaactttaataggaagacaccctggtgatatactgtcatcacttcagttagcat |
100 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||||| ||| || ||||||||||||| | | ||| |
|
|
| T |
18723078 |
gtgaatgaaaagtgtgatgtatatagttttggtgtagtggcacttgaaactttagctggaaggcaccctggggatttattgtcatcacttcaatcaacat |
18722979 |
T |
|
| Q |
101 |
cgactcaaggcatgaaattatgtgaagtattagaccagcgtctcccacttccaaataatgtgaaggttttacttgacataattcgtgttgctgtagtcgc |
200 |
Q |
| |
|
| || ||| | | ||| ||| | ||||||||||||||||||| |||||||||||||||| | |||| ||| | ||||||||| | |||| || || || |
|
|
| T |
18722978 |
caacacaaagtgtcaaactatatcaagtattagaccagcgtcttccacttccaaataatgaaatggttatacgtaacataattcattttgccgttgttgc |
18722879 |
T |
|
| Q |
201 |
atttgcatgcttaaatctcaaccctcgctctcgaccagaaatgaagtgtgtgt |
253 |
Q |
| |
|
||||||||||||||| |||| ||||| ||||||||| |||||| ||||||| |
|
|
| T |
18722878 |
ctttgcatgcttaaatgtcaatcctcgttctcgaccaacaatgaaatgtgtgt |
18722826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0491 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0491
Description:
Target: scaffold0491; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 5571 - 5319
Alignment:
| Q |
1 |
gtgagtgaaaagtgtgatgtatatagctttggagtagtggcacttgaaactttaataggaagacaccctggtgatatactgtcatcacttcagttagcat |
100 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||||| ||| || ||||||||||||| | | ||| |
|
|
| T |
5571 |
gtgaatgaaaagtgtgatgtatatagttttggtgtagtggcacttgaaactttagctggaaggcaccctggggatttattgtcatcacttcaatcaacat |
5472 |
T |
|
| Q |
101 |
cgactcaaggcatgaaattatgtgaagtattagaccagcgtctcccacttccaaataatgtgaaggttttacttgacataattcgtgttgctgtagtcgc |
200 |
Q |
| |
|
|||| ||| | | ||| ||||| ||||||||||||||||||| |||||||||||||||| | |||| ||| | ||||||||| | |||| || || || |
|
|
| T |
5471 |
cgacacaaagtgtcaaactatgtcaagtattagaccagcgtcttccacttccaaataatgaaatggttatacgtaacataattcattttgccgttgttgc |
5372 |
T |
|
| Q |
201 |
atttgcatgcttaaatctcaaccctcgctctcgaccagaaatgaagtgtgtgt |
253 |
Q |
| |
|
||||||||||||||| |||| ||||| ||||||||| |||||| ||||||| |
|
|
| T |
5371 |
ctttgcatgcttaaatgtcaatcctcgttctcgaccaacaatgaaatgtgtgt |
5319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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