View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18051_high_17 (Length: 240)
Name: NF18051_high_17
Description: NF18051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18051_high_17 |
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Alignment Details
Target: chr1 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 17 - 224
Target Start/End: Original strand, 31141607 - 31141818
Alignment:
| Q |
17 |
gaatactgaatatggatcatgattattattga----attgaatagtnnnnnnngagaaagttgcaaagcaatgaaccaagacaatttcggcannnnnnnn |
112 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
31141607 |
gaatactgaatatggatcatgattattattgattgaattgaatagtaaaaaaagagaaagttgcaaagcaatgaaccaagacaatttcggcattttttgt |
31141706 |
T |
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| Q |
113 |
catttgaattagaacttgtggacaactaactgattctataacctgactaaattaacattaccttcgcagtgaaccaagacaattaaaaacagaaataagt |
212 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
31141707 |
catttgaattaggacttgtggacaactaactgattctataacctgactaaattaacattaccttcgcaatgaaccaagacaattaaaaacagaaataagt |
31141806 |
T |
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| Q |
213 |
atcatcagagtg |
224 |
Q |
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|||||||||||| |
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| T |
31141807 |
atcatcagagtg |
31141818 |
T |
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