View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18051_high_9 (Length: 377)

Name: NF18051_high_9
Description: NF18051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18051_high_9
NF18051_high_9
[»] chr4 (85 HSPs)
chr4 (183-369)||(46193405-46193591)
chr4 (183-369)||(22434179-22434365)
chr4 (182-369)||(11153145-11153332)
chr4 (183-369)||(45082783-45082969)
chr4 (180-369)||(23494802-23494991)
chr4 (181-369)||(15523233-15523421)
chr4 (181-369)||(51021155-51021342)
chr4 (185-369)||(2118295-2118480)
chr4 (180-369)||(20470870-20471059)
chr4 (181-369)||(54995067-54995255)
chr4 (182-369)||(25938030-25938217)
chr4 (183-369)||(25447247-25447433)
chr4 (183-369)||(12234688-12234874)
chr4 (180-369)||(4219918-4220107)
chr4 (186-369)||(18751602-18751785)
chr4 (186-364)||(48526545-48526723)
chr4 (200-369)||(12503453-12503622)
chr4 (185-346)||(46193788-46193948)
chr4 (181-309)||(33109883-33110011)
chr4 (185-346)||(23494445-23494605)
chr4 (181-346)||(25447619-25447783)
chr4 (185-346)||(33109686-33109846)
chr4 (182-346)||(15523617-15523780)
chr4 (183-346)||(11153530-11153692)
chr4 (185-343)||(4219559-4219716)
chr4 (177-343)||(12234323-12234488)
chr4 (180-346)||(25937667-25937832)
chr4 (182-347)||(22170319-22170482)
chr4 (185-346)||(38962202-38962362)
chr4 (180-346)||(22434561-22434724)
chr4 (182-345)||(48526195-48526356)
chr4 (180-297)||(18763951-18764068)
chr4 (180-346)||(51020794-51020959)
chr4 (181-298)||(54995498-54995614)
chr4 (179-346)||(45082428-45082592)
chr4 (182-311)||(10258304-10258433)
chr4 (184-300)||(20958288-20958403)
chr4 (186-346)||(2118679-2118837)
chr4 (181-297)||(48293592-48293708)
chr4 (201-300)||(43243708-43243807)
chr4 (183-300)||(35363028-35363146)
chr4 (181-297)||(48713777-48713893)
chr4 (186-309)||(16690939-16691062)
chr4 (177-300)||(44892576-44892699)
chr4 (181-289)||(48708293-48708401)
chr4 (183-309)||(48294961-48295088)
chr4 (201-309)||(43281210-43281317)
chr4 (183-309)||(16691491-16691616)
chr4 (190-295)||(20957196-20957301)
chr4 (184-309)||(44890518-44890643)
chr4 (182-346)||(17503973-17504135)
chr4 (251-346)||(12503819-12503913)
chr4 (182-253)||(16318251-16318322)
chr4 (176-309)||(30597940-30598072)
chr4 (186-355)||(40160466-40160633)
chr4 (241-309)||(43242328-43242396)
chr4 (183-291)||(55189528-55189636)
chr4 (176-344)||(34789375-34789542)
chr4 (180-344)||(12593409-12593572)
chr4 (179-344)||(34789768-34789933)
chr4 (181-344)||(46737041-46737203)
chr4 (182-344)||(12593023-12593184)
chr4 (181-344)||(19528867-19529030)
chr4 (185-344)||(24336149-24336307)
chr4 (181-344)||(34807114-34807277)
chr4 (186-344)||(14439831-14439988)
chr4 (178-344)||(28465467-28465632)
chr4 (220-346)||(35193345-35193469)
chr4 (182-344)||(55677343-55677505)
chr4 (282-346)||(17504343-17504407)
chr4 (179-343)||(35193691-35193852)
chr4 (244-300)||(44220805-44220861)
chr4 (186-344)||(229545-229702)
chr4 (182-344)||(21034622-21034784)
chr4 (180-266)||(33689826-33689912)
chr4 (185-344)||(54440573-54440729)
chr4 (181-344)||(229159-229321)
chr4 (180-264)||(45838544-45838628)
chr4 (185-236)||(44219377-44219428)
chr4 (178-236)||(41608908-41608966)
chr4 (180-344)||(28465078-28465241)
chr4 (186-294)||(55191208-55191318)
chr4 (183-344)||(56077710-56077870)
chr4 (185-344)||(24851851-24852010)
chr4 (182-346)||(40160093-40160255)
[»] chr8 (46 HSPs)
chr8 (182-369)||(13224998-13225185)
chr8 (179-369)||(19176286-19176476)
chr8 (186-369)||(12572210-12572393)
chr8 (182-369)||(11656816-11657003)
chr8 (183-369)||(41681493-41681679)
chr8 (182-369)||(44831246-44831433)
chr8 (186-369)||(9928912-9929095)
chr8 (185-369)||(33328499-33328683)
chr8 (180-334)||(34540942-34541096)
chr8 (184-369)||(31133579-31133764)
chr8 (180-369)||(33742919-33743107)
chr8 (180-346)||(19176673-19176838)
chr8 (181-343)||(41681132-41681292)
chr8 (182-346)||(9930040-9930203)
chr8 (180-346)||(11656452-11656618)
chr8 (181-334)||(4629795-4629948)
chr8 (180-346)||(12571860-12572026)
chr8 (181-346)||(31133218-31133382)
chr8 (173-346)||(44831628-44831800)
chr8 (186-346)||(33328161-33328320)
chr8 (187-346)||(13224645-13224802)
chr8 (183-346)||(9178019-9178180)
chr8 (181-291)||(11336959-11337069)
chr8 (275-369)||(9177724-9177818)
chr8 (186-346)||(4630175-4630328)
chr8 (182-295)||(8073985-8074097)
chr8 (180-309)||(10918123-10918252)
chr8 (235-346)||(33743302-33743412)
chr8 (184-344)||(28254812-28254971)
chr8 (180-344)||(5730814-5730977)
chr8 (179-344)||(35427198-35427362)
chr8 (262-309)||(43958264-43958311)
chr8 (178-264)||(15255848-15255934)
chr8 (180-326)||(16578105-16578250)
chr8 (180-344)||(6115496-6115660)
chr8 (183-343)||(18049590-18049750)
chr8 (181-216)||(9177665-9177700)
chr8 (177-344)||(9796720-9796886)
chr8 (182-344)||(599531-599692)
chr8 (186-344)||(18428147-18428305)
chr8 (288-346)||(18805267-18805324)
chr8 (182-223)||(10919691-10919732)
chr8 (186-346)||(28877274-28877432)
chr8 (174-344)||(41260647-41260816)
chr8 (180-230)||(43958206-43958256)
chr8 (184-344)||(42035773-42035932)
[»] chr7 (51 HSPs)
chr7 (180-369)||(19590884-19591073)
chr7 (181-369)||(32004612-32004800)
chr7 (180-369)||(38859000-38859189)
chr7 (181-369)||(2658837-2659025)
chr7 (183-369)||(35288903-35289089)
chr7 (180-369)||(37787126-37787315)
chr7 (181-369)||(34533789-34533977)
chr7 (182-369)||(19830779-19830965)
chr7 (179-366)||(23952726-23952914)
chr7 (186-369)||(4641803-4641983)
chr7 (196-369)||(29099863-29100036)
chr7 (181-346)||(19830418-19830582)
chr7 (182-346)||(37786766-37786929)
chr7 (183-346)||(19590525-19590687)
chr7 (183-346)||(32004997-32005159)
chr7 (186-346)||(29100234-29100393)
chr7 (182-346)||(38858642-38858805)
chr7 (180-299)||(38160948-38161067)
chr7 (176-346)||(35289284-35289453)
chr7 (181-346)||(34534174-34534338)
chr7 (178-346)||(2659223-2659390)
chr7 (186-346)||(4641443-4641602)
chr7 (176-346)||(23953112-23953280)
chr7 (181-346)||(4478083-4478247)
chr7 (181-309)||(28583437-28583565)
chr7 (184-309)||(28584341-28584466)
chr7 (183-369)||(4477702-4477887)
chr7 (185-344)||(9181534-9181692)
chr7 (182-344)||(34595158-34595319)
chr7 (182-322)||(49064033-49064171)
chr7 (180-344)||(7732485-7732648)
chr7 (183-344)||(27245203-27245364)
chr7 (180-344)||(48247977-48248141)
chr7 (186-344)||(26026320-26026478)
chr7 (185-343)||(9393738-9393894)
chr7 (186-344)||(25637584-25637741)
chr7 (179-343)||(25637193-25637357)
chr7 (186-346)||(35578902-35579060)
chr7 (177-264)||(5334284-5334371)
chr7 (182-264)||(39136998-39137080)
chr7 (184-344)||(15712366-15712525)
chr7 (181-264)||(787251-787334)
chr7 (183-266)||(26048409-26048492)
chr7 (180-311)||(33880617-33880748)
chr7 (184-259)||(39388738-39388813)
chr7 (182-344)||(786781-786943)
chr7 (182-344)||(16081685-16081846)
chr7 (288-346)||(32427404-32427461)
chr7 (180-344)||(48247584-48247751)
chr7 (182-333)||(7732884-7733034)
chr7 (182-266)||(11971333-11971417)
[»] chr6 (44 HSPs)
chr6 (180-369)||(12935154-12935343)
chr6 (180-369)||(22219712-22219901)
chr6 (180-369)||(11445346-11445535)
chr6 (186-346)||(10899942-10900102)
chr6 (182-369)||(31470314-31470501)
chr6 (182-369)||(20741460-20741650)
chr6 (181-369)||(23075487-23075675)
chr6 (186-369)||(18504922-18505105)
chr6 (179-369)||(2319668-2319857)
chr6 (183-369)||(18257496-18257682)
chr6 (181-346)||(20741098-20741262)
chr6 (181-346)||(18257135-18257299)
chr6 (183-346)||(10900313-10900475)
chr6 (182-344)||(11276589-11276751)
chr6 (184-355)||(15827639-15827811)
chr6 (180-346)||(28472634-28472798)
chr6 (180-346)||(29859823-29859987)
chr6 (183-346)||(11276965-11277127)
chr6 (182-346)||(15828024-15828187)
chr6 (183-369)||(4811616-4811801)
chr6 (180-346)||(11444984-11445149)
chr6 (178-346)||(1149814-1149982)
chr6 (181-346)||(12935540-12935704)
chr6 (184-345)||(31470700-31470860)
chr6 (186-346)||(2322602-2322760)
chr6 (182-280)||(23073998-23074096)
chr6 (184-343)||(18505305-18505463)
chr6 (185-309)||(29033436-29033560)
chr6 (183-346)||(4811372-4811534)
chr6 (185-296)||(29035069-29035180)
chr6 (181-271)||(1149463-1149553)
chr6 (177-309)||(3835145-3835277)
chr6 (180-300)||(18296142-18296262)
chr6 (180-343)||(5120856-5121018)
chr6 (182-344)||(35163572-35163734)
chr6 (182-344)||(31574111-31574272)
chr6 (183-344)||(31073528-31073688)
chr6 (313-369)||(1149558-1149614)
chr6 (183-239)||(22534214-22534270)
chr6 (296-362)||(32836114-32836179)
chr6 (183-344)||(25472398-25472559)
chr6 (183-346)||(32836381-32836542)
chr6 (182-344)||(5114467-5114628)
chr6 (276-344)||(31573817-31573885)
[»] chr5 (67 HSPs)
chr5 (181-369)||(19359495-19359683)
chr5 (172-369)||(16018946-16019142)
chr5 (181-369)||(5818927-5819115)
chr5 (180-369)||(8647797-8647986)
chr5 (182-369)||(25000448-25000635)
chr5 (185-369)||(2864756-2864940)
chr5 (182-369)||(8461290-8461477)
chr5 (185-367)||(14215243-14215425)
chr5 (180-369)||(24331556-24331747)
chr5 (182-369)||(29454739-29454926)
chr5 (181-369)||(18182968-18183156)
chr5 (183-369)||(164191-164376)
chr5 (183-346)||(8647438-8647600)
chr5 (185-369)||(15371873-15372060)
chr5 (183-362)||(15709335-15709513)
chr5 (183-346)||(19359136-19359298)
chr5 (180-346)||(18183352-18183517)
chr5 (181-346)||(2865138-2865302)
chr5 (182-346)||(29455125-29455288)
chr5 (183-345)||(5819313-5819474)
chr5 (181-346)||(24362219-24362383)
chr5 (180-346)||(15372256-15372421)
chr5 (180-346)||(15708968-15709132)
chr5 (189-369)||(24361843-24362022)
chr5 (181-346)||(8460928-8461092)
chr5 (181-346)||(14463904-14464067)
chr5 (189-369)||(24325218-24325397)
chr5 (180-346)||(14215626-14215791)
chr5 (18-130)||(5501830-5501936)
chr5 (180-346)||(164574-164739)
chr5 (182-300)||(16018588-16018705)
chr5 (184-300)||(4222150-4222266)
chr5 (183-309)||(7349436-7349562)
chr5 (183-300)||(4623148-4623265)
chr5 (205-345)||(25000112-25000251)
chr5 (183-309)||(7348559-7348685)
chr5 (183-300)||(4219663-4219780)
chr5 (184-311)||(6018315-6018441)
chr5 (184-366)||(10721787-10721967)
chr5 (265-344)||(14462686-14462769)
chr5 (185-346)||(24331943-24332107)
chr5 (182-355)||(41834434-41834606)
chr5 (189-309)||(6019189-6019309)
chr5 (181-344)||(28290030-28290192)
chr5 (182-344)||(28289683-28289844)
chr5 (196-309)||(4624644-4624757)
chr5 (182-362)||(27307060-27307238)
chr5 (181-344)||(15029695-15029857)
chr5 (178-369)||(28494839-28495029)
chr5 (246-346)||(32305881-32305979)
chr5 (185-344)||(16752955-16753114)
chr5 (183-344)||(19291356-19291517)
chr5 (174-346)||(16752573-16752743)
chr5 (185-344)||(22651347-22651505)
chr5 (282-346)||(28495225-28495288)
chr5 (184-343)||(8419008-8419165)
chr5 (186-264)||(4966819-4966897)
chr5 (288-345)||(27307443-27307499)
chr5 (178-266)||(15115555-15115643)
chr5 (180-344)||(21371082-21371245)
chr5 (265-300)||(13814155-13814190)
chr5 (181-344)||(18150109-18150272)
chr5 (180-311)||(20266333-20266464)
chr5 (181-264)||(22651776-22651859)
chr5 (149-182)||(5501739-5501772)
chr5 (187-324)||(38900648-38900784)
chr5 (174-206)||(4967294-4967326)
[»] chr2 (63 HSPs)
chr2 (175-369)||(43058692-43058885)
chr2 (184-369)||(239711-239896)
chr2 (181-369)||(22374684-22374872)
chr2 (182-369)||(18450829-18451016)
chr2 (182-369)||(28616973-28617160)
chr2 (186-367)||(40027501-40027682)
chr2 (185-369)||(40815347-40815531)
chr2 (181-369)||(1978468-1978656)
chr2 (180-369)||(7446705-7446894)
chr2 (181-369)||(11090879-11091067)
chr2 (180-346)||(26538461-26538627)
chr2 (183-369)||(3025822-3026006)
chr2 (186-362)||(8425358-8425533)
chr2 (181-346)||(11090519-11090683)
chr2 (180-369)||(14432500-14432689)
chr2 (179-346)||(239349-239514)
chr2 (180-346)||(18451214-18451379)
chr2 (181-346)||(22374318-22374482)
chr2 (180-346)||(40815728-40815893)
chr2 (186-346)||(8425743-8425902)
chr2 (182-346)||(40027139-40027302)
chr2 (183-346)||(28616613-28616776)
chr2 (181-346)||(1978106-1978270)
chr2 (186-346)||(14432145-14432304)
chr2 (182-346)||(26538096-26538259)
chr2 (182-309)||(20444748-20444875)
chr2 (183-346)||(43058333-43058495)
chr2 (178-346)||(3025461-3025627)
chr2 (181-301)||(28847122-28847242)
chr2 (182-340)||(7446341-7446497)
chr2 (180-298)||(20440461-20440579)
chr2 (183-309)||(35779708-35779834)
chr2 (184-298)||(35781093-35781207)
chr2 (185-309)||(8972239-8972363)
chr2 (185-296)||(15551501-15551612)
chr2 (185-300)||(15552482-15552596)
chr2 (179-346)||(28143414-28143579)
chr2 (181-346)||(14942228-14942394)
chr2 (182-342)||(31797166-31797324)
chr2 (183-344)||(4355755-4355915)
chr2 (180-344)||(62954-63117)
chr2 (180-344)||(20128123-20128286)
chr2 (180-343)||(38007947-38008110)
chr2 (181-344)||(44219642-44219804)
chr2 (183-344)||(42192240-42192400)
chr2 (182-344)||(42192628-42192790)
chr2 (182-344)||(43216095-43216256)
chr2 (182-344)||(11539636-11539798)
chr2 (179-344)||(15550669-15550834)
chr2 (179-344)||(16175735-16175900)
chr2 (183-322)||(6949850-6949990)
chr2 (184-344)||(16953320-16953479)
chr2 (180-344)||(33920997-33921161)
chr2 (182-344)||(32418158-32418317)
chr2 (182-344)||(6949450-6949612)
chr2 (179-273)||(25336056-25336150)
chr2 (182-344)||(38008337-38008498)
chr2 (181-344)||(43160007-43160170)
chr2 (182-343)||(43160397-43160558)
chr2 (193-275)||(2190530-2190612)
chr2 (182-344)||(20127735-20127897)
chr2 (179-264)||(24140139-24140224)
chr2 (186-258)||(3824179-3824251)
[»] chr1 (63 HSPs)
chr1 (184-369)||(5539817-5540002)
chr1 (182-369)||(18984478-18984665)
chr1 (185-369)||(17433574-17433758)
chr1 (182-369)||(39154379-39154566)
chr1 (176-369)||(15173453-15173645)
chr1 (181-369)||(50970276-50970464)
chr1 (181-370)||(15646190-15646379)
chr1 (180-369)||(21856039-21856228)
chr1 (183-369)||(29869978-29870164)
chr1 (191-369)||(33143925-33144103)
chr1 (184-369)||(8678542-8678727)
chr1 (183-346)||(29307324-29307487)
chr1 (184-369)||(4636330-4636515)
chr1 (183-355)||(26859059-26859231)
chr1 (180-346)||(9019345-9019511)
chr1 (183-369)||(17112282-17112467)
chr1 (186-346)||(15173099-15173258)
chr1 (182-346)||(50970661-50970824)
chr1 (181-346)||(18984117-18984281)
chr1 (185-346)||(33144302-33144462)
chr1 (182-346)||(5540201-5540364)
chr1 (182-346)||(15646578-15646741)
chr1 (184-367)||(5962579-5962762)
chr1 (183-346)||(8678925-8679086)
chr1 (183-346)||(29306953-29307115)
chr1 (186-346)||(5962961-5963120)
chr1 (182-346)||(29869619-29869782)
chr1 (181-346)||(26859443-26859606)
chr1 (180-333)||(9018970-9019122)
chr1 (183-346)||(21856426-21856588)
chr1 (183-346)||(17433216-17433378)
chr1 (182-309)||(52268289-52268416)
chr1 (185-346)||(39154021-39154181)
chr1 (185-299)||(52269177-52269291)
chr1 (180-269)||(2733416-2733505)
chr1 (185-258)||(47826966-47827039)
chr1 (191-283)||(47827033-47827125)
chr1 (180-346)||(44802555-44802720)
chr1 (177-346)||(39485059-39485226)
chr1 (178-346)||(17088524-17088690)
chr1 (178-344)||(9992149-9992315)
chr1 (178-333)||(45048533-45048686)
chr1 (183-333)||(9833549-9833698)
chr1 (276-346)||(17088243-17088312)
chr1 (186-346)||(45048158-45048316)
chr1 (243-346)||(4636033-4636134)
chr1 (183-264)||(50419725-50419806)
chr1 (179-342)||(29021252-29021415)
chr1 (182-264)||(29438929-29439011)
chr1 (186-344)||(17641750-17641912)
chr1 (271-340)||(44291701-44291769)
chr1 (185-344)||(50926232-50926392)
chr1 (185-344)||(34555766-34555926)
chr1 (181-344)||(50926627-50926789)
chr1 (185-344)||(10278550-10278709)
chr1 (182-344)||(30786770-30786932)
chr1 (184-341)||(23526659-23526815)
chr1 (182-256)||(39843497-39843571)
chr1 (185-344)||(44291303-44291462)
chr1 (182-344)||(52335896-52336057)
chr1 (183-343)||(9992542-9992701)
chr1 (276-344)||(8229732-8229800)
chr1 (181-257)||(52233736-52233812)
[»] chr3 (92 HSPs)
chr3 (177-369)||(5137340-5137532)
chr3 (182-369)||(20840920-20841107)
chr3 (183-369)||(25853234-25853420)
chr3 (183-369)||(37727289-37727475)
chr3 (181-369)||(4275723-4275911)
chr3 (182-362)||(39555577-39555757)
chr3 (175-369)||(29801775-29801969)
chr3 (180-369)||(43973799-43973988)
chr3 (182-369)||(31778652-31778839)
chr3 (179-369)||(17464487-17464677)
chr3 (182-369)||(27393660-27393847)
chr3 (182-357)||(30098134-30098309)
chr3 (180-369)||(22424811-22425000)
chr3 (183-369)||(23644823-23645010)
chr3 (186-369)||(32534962-32535145)
chr3 (181-361)||(26837358-26837538)
chr3 (183-346)||(39555960-39556122)
chr3 (180-346)||(20840557-20840722)
chr3 (181-347)||(31779034-31779199)
chr3 (186-367)||(41047060-41047239)
chr3 (186-369)||(24300560-24300742)
chr3 (186-369)||(26274570-26274753)
chr3 (181-346)||(5136978-5137142)
chr3 (180-346)||(24300939-24301104)
chr3 (176-339)||(48452982-48453144)
chr3 (182-346)||(23644461-23644624)
chr3 (186-346)||(41046703-41046862)
chr3 (182-346)||(27393960-27394123)
chr3 (182-346)||(37726928-37727091)
chr3 (180-346)||(30104479-30104643)
chr3 (183-346)||(32535342-32535508)
chr3 (186-309)||(25612396-25612519)
chr3 (183-346)||(43973441-43973603)
chr3 (180-346)||(26837739-26837903)
chr3 (185-346)||(25853610-25853770)
chr3 (184-300)||(32697128-32697244)
chr3 (176-346)||(17464874-17465044)
chr3 (187-333)||(22425209-22425354)
chr3 (183-309)||(23228427-23228552)
chr3 (183-300)||(29801356-29801473)
chr3 (180-309)||(51474753-51474882)
chr3 (184-297)||(51473429-51473542)
chr3 (183-309)||(50116828-50116954)
chr3 (181-294)||(45965936-45966049)
chr3 (180-346)||(26274950-26275114)
chr3 (185-309)||(25420560-25420684)
chr3 (181-300)||(37220555-37220674)
chr3 (181-258)||(37222041-37222118)
chr3 (179-346)||(36701480-36701646)
chr3 (184-280)||(25419145-25419242)
chr3 (202-297)||(18010176-18010271)
chr3 (179-346)||(27200076-27200241)
chr3 (182-344)||(51827956-51828117)
chr3 (184-355)||(37076049-37076219)
chr3 (181-344)||(55389603-55389765)
chr3 (174-344)||(49720362-49720531)
chr3 (180-345)||(50900913-50901076)
chr3 (179-344)||(52237203-52237367)
chr3 (186-297)||(32695706-32695817)
chr3 (178-344)||(52375717-52375882)
chr3 (180-346)||(49407793-49407957)
chr3 (288-346)||(55192222-55192279)
chr3 (181-344)||(47431694-47431857)
chr3 (186-344)||(22370599-22370757)
chr3 (276-346)||(37075781-37075850)
chr3 (183-344)||(40275093-40275255)
chr3 (183-344)||(50662798-50662958)
chr3 (182-343)||(330223-330383)
chr3 (182-344)||(14654577-14654736)
chr3 (184-346)||(49408167-49408326)
chr3 (277-344)||(8873784-8873850)
chr3 (182-344)||(25534889-25535051)
chr3 (186-344)||(44676858-44677015)
chr3 (186-344)||(40839038-40839195)
chr3 (183-344)||(49951932-49952092)
chr3 (182-344)||(51828538-51828700)
chr3 (271-344)||(2323466-2323538)
chr3 (183-344)||(51828343-51828504)
chr3 (182-297)||(23227261-23227370)
chr3 (180-344)||(38535306-38535469)
chr3 (241-344)||(32730775-32730877)
chr3 (181-344)||(41998227-41998390)
chr3 (182-344)||(46013421-46013582)
chr3 (176-214)||(25611491-25611529)
chr3 (182-264)||(41998693-41998775)
chr3 (186-344)||(49951549-49951706)
chr3 (182-344)||(51472854-51473015)
chr3 (186-344)||(51473241-51473399)
chr3 (183-344)||(43222390-43222550)
chr3 (282-346)||(37847204-37847267)
chr3 (177-229)||(40275593-40275645)
chr3 (182-266)||(49720824-49720908)
[»] scaffold0951 (2 HSPs)
scaffold0951 (180-367)||(2028-2215)
scaffold0951 (181-346)||(1665-1829)
[»] scaffold0417 (2 HSPs)
scaffold0417 (183-362)||(10989-11168)
scaffold0417 (202-347)||(10640-10784)
[»] scaffold1223 (2 HSPs)
scaffold1223 (183-346)||(1123-1286)
scaffold1223 (185-346)||(755-914)
[»] scaffold0007 (6 HSPs)
scaffold0007 (186-369)||(64664-64847)
scaffold0007 (182-346)||(64301-64464)
scaffold0007 (185-346)||(205752-205911)
scaffold0007 (271-346)||(205038-205112)
scaffold0007 (271-346)||(205468-205541)
scaffold0007 (182-280)||(210786-210884)
[»] scaffold0295 (2 HSPs)
scaffold0295 (177-346)||(4787-4955)
scaffold0295 (185-355)||(5168-5334)
[»] scaffold0157 (2 HSPs)
scaffold0157 (200-369)||(16855-17024)
scaffold0157 (251-346)||(16564-16658)
[»] scaffold0019 (1 HSPs)
scaffold0019 (180-346)||(134056-134221)
[»] scaffold0273 (2 HSPs)
scaffold0273 (181-346)||(4590-4754)
scaffold0273 (222-369)||(4242-4389)
[»] scaffold0027 (2 HSPs)
scaffold0027 (186-346)||(42172-42332)
scaffold0027 (173-346)||(42542-42713)
[»] scaffold0432 (2 HSPs)
scaffold0432 (186-369)||(9935-10116)
scaffold0432 (186-300)||(10300-10414)
[»] scaffold0176 (2 HSPs)
scaffold0176 (183-280)||(19069-19166)
scaffold0176 (182-346)||(18834-18996)
[»] scaffold1585 (1 HSPs)
scaffold1585 (184-308)||(568-692)
[»] scaffold0113 (1 HSPs)
scaffold0113 (182-297)||(28674-28789)
[»] scaffold0057 (2 HSPs)
scaffold0057 (186-309)||(61877-62000)
scaffold0057 (181-257)||(61026-61102)
[»] scaffold1696 (1 HSPs)
scaffold1696 (187-299)||(454-565)
[»] scaffold0076 (1 HSPs)
scaffold0076 (186-286)||(8451-8551)
[»] scaffold0168 (1 HSPs)
scaffold0168 (232-309)||(7707-7784)
[»] scaffold1339 (1 HSPs)
scaffold1339 (173-208)||(30-65)
[»] scaffold0830 (1 HSPs)
scaffold0830 (173-208)||(5352-5387)


Alignment Details
Target: chr4 (Bit Score: 171; Significance: 9e-92; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 46193405 - 46193591
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgt 46193504  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  46193505 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacggttttagatctacccctatgct 46193591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 22434179 - 22434365
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  22434179 ggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 22434278  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  22434279 tgtatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 22434365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 182 - 369
Target Start/End: Original strand, 11153145 - 11153332
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||| |||| ||||||||||||||||||||||    
T  11153145 aggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttg 11153244  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  11153245 ttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 11153332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 183 - 369
Target Start/End: Complemental strand, 45082969 - 45082783
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| | ||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  45082969 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 45082870  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  45082869 tgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 45082783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 180 - 369
Target Start/End: Complemental strand, 23494991 - 23494802
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  23494991 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 23494892  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||| ||||||| |||||||||||||||| | |||||||||| |||||| |||||||||| |||||||||||||    
T  23494891 tgttgcatttttcgtcctacatcctattctcaaactccagaaacgtaaagaaatggcaattttaggcggttttagacctacccctatgct 23494802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 181 - 369
Target Start/End: Original strand, 15523233 - 15523421
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  15523233 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttt 15523332  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
     ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||  |||||||||| |||||||||||||    
T  15523333 tttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 15523421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 181 - 369
Target Start/End: Complemental strand, 51021342 - 51021155
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||| ||||||| ||||||||||||     
T  51021342 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatcatttt- 51021244  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||    
T  51021243 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttaggcggttttagacctacccctatgct 51021155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 185 - 369
Target Start/End: Original strand, 2118295 - 2118480
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||||||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttg 2118394  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctac-ccctatgct 369  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||| |||| |||||||||    
T  2118395 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaattgcagttttaggcggttttagacctactccctatgct 2118480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 180 - 369
Target Start/End: Complemental strand, 20471059 - 20470870
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||||||| ||||||||| |||| |||||||||||||||    
T  20471059 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttt 20470960  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||| |||||||||||||    
T  20470959 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttaggcggttttagacctacccctatgct 20470870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 181 - 369
Target Start/End: Original strand, 54995067 - 54995255
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||| ||||||||| |||||||||||||||||||||    
T  54995067 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 54995166  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||| |||||||||| |||||| ||||||    
T  54995167 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggttttagacctacccttatgct 54995255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 182 - 369
Target Start/End: Complemental strand, 25938217 - 25938030
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||  |||||||||||||||||||||    
T  25938217 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttg 25938118  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||  |||||||||| ||||| |||||||    
T  25938117 ttgcattttttgtcctacctcctattttcaaactccagaaacacaaagaaatggcagttttatgcggttttagacctacctctatgct 25938030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 25447247 - 25447433
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 25447346  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||| | |||||||| |||||| ||||||    
T  25447347 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttaggcagttttagacctacccatatgct 25447433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 183 - 369
Target Start/End: Complemental strand, 12234874 - 12234688
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |  || ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  12234874 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 12234775  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| | |||||||| |||||||||||||    
T  12234774 tgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttaggcagttttagacctacccctatgct 12234688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 180 - 369
Target Start/End: Complemental strand, 4220107 - 4219918
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |  |||||| ||||||||| |||||||||||||| |||||||||||||||    
T  4220107 ttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatttt 4220008  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||  ||||||||| |||||||||| | |||||||||||    
T  4220007 tgttgcatttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttaggcggttttagacccacccctatgct 4219918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 186 - 369
Target Start/End: Original strand, 18751602 - 18751785
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||||||||||||||||||||||||||||||||  ||| | ||| ||||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgttgc 18751701  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||  ||||||||||||    
T  18751702 atttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttaggcggttttagacttacccctatgct 18751785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 186 - 364
Target Start/End: Complemental strand, 48526723 - 48526545
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||| |||||||||||||||||||||| |||||||||||| | ||| ||||||||||||| ||||||||| |||||||||||||||| |||||||||    
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgttgc 48526624  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 364  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||| |||||||||| ||||||||    
T  48526623 atttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttaggcggttttagacctacccct 48526545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 200 - 369
Target Start/End: Original strand, 12503453 - 12503622
Alignment:
Q  200 ggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctac 299  Q
    ||||||||||||||| | ||||||||||| |  ||| ||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 12503552  T
Q  300 ctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| || ||||||| |||||||||||||    
T  12503553 ctcctattttcaaactccagaaacgcagagaaattacagttttaggcgattttagacctacccctatgct 12503622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 185 - 346
Target Start/End: Complemental strand, 46193948 - 46193788
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||| |||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 46193849  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||| || ||||| |  ||||| ||||| |||||| || |||||||||||    
T  46193848 catttttcgtcctaccccccatttt-attctccaaaaacgtagagaattgacagttttagac 46193788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 181 - 309
Target Start/End: Complemental strand, 33110011 - 33109883
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| | ||||||| |||||||||||||||||||||    
T  33110011 taggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcattttt 33109912  T
Q  281 gttgcatttttcgtcctacctcctatttt 309  Q
    |||||||||||||||||||||||||||||    
T  33109911 gttgcatttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 185 - 346
Target Start/End: Original strand, 23494445 - 23494605
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||  ||||||||||||||||||||| |||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattg 23494544  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||| || ||||| |  ||||| | ||||||||||||| |||||||||||    
T  23494545 catttttcgtcctaccccccatttt-attctccaaacacgcagagaaatgacagttttagac 23494605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 181 - 346
Target Start/End: Complemental strand, 25447783 - 25447619
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  25447783 taggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 25447684  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||||  | ||||| |  ||||| ||||||||||||||  |||||||||||    
T  25447683 gttgcatttttcgtcctaccctccatttt-attctccaaaaacgcagagaaattacagttttagac 25447619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 185 - 346
Target Start/End: Original strand, 33109686 - 33109846
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    |||||||||| ||||||||||||||||||||| ||||||||||| | ||||||| ||||||||| ||||||||| |||||||||||||||||||||||||    
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttg 33109785  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  33109786 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 33109846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 182 - 346
Target Start/End: Complemental strand, 15523780 - 15523617
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||| | ||||||||||||||||| | |||||||||||||||||| |||||||||||    
T  15523780 aggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttg 15523681  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||| ||||||| |||||||||||    
T  15523680 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgacagttttagac 15523617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 183 - 346
Target Start/End: Complemental strand, 11153692 - 11153530
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||| ||||||||| | |||||||||||||||||||||    
T  11153692 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgt 11153593  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||  | ||||| |  ||||| ||||||||||||||  |||||||||||    
T  11153592 tgcatttttcgtcctaccctccatttt-attctccaaaaacgcagagaaataacagttttagac 11153530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 185 - 343
Target Start/End: Original strand, 4219559 - 4219716
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    |||||||||| ||||||||||||||||||||||||||||||||| | |||||||| |||||||||| |||||||  ||||||||||||||||||||||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttg 4219658  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagtttta 343  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||| ||||||||    
T  4219659 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 4219716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 177 - 343
Target Start/End: Original strand, 12234323 - 12234488
Alignment:
Q  177 taattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcat 276  Q
    |||||||||||||||||||||||||||||| ||||||||| || |||||||| | ||||||||||||||||| ||||||||| |||| ||||||||||||    
T  12234323 taattaggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat 12234422  T
Q  277 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagtttta 343  Q
    |||||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||  ||||||||    
T  12234423 ttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagtttta 12234488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 180 - 346
Target Start/End: Original strand, 25937667 - 25937832
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||| | ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  25937667 ttaggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 25937766  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||| |||||  | || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  25937767 tgttgcattttttgtcctgtcccccatttt-attctccaaaaacgcagagaaatgacagttttagac 25937832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 182 - 347
Target Start/End: Complemental strand, 22170482 - 22170319
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||| |||||||| | ||||||| |||| |||||||||||||||||    
T  22170482 aggcttaattacacttttggtcctcgtgttttgacctactgacgaaatt-gtcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttg 22170384  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacg 347  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| ||||||||||||    
T  22170383 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacg 22170319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 185 - 346
Target Start/End: Complemental strand, 38962362 - 38962202
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    |||||||||| |||||||||||||||||||| ||| |||||||| | |||| |||||||||||| ||||||||| |||||||||||||||||||||||||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 38962263  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||| || ||||| |  || || ||||||||||||||| |||||||||||    
T  38962262 catttttcgtcctaccccccatttt-attcttcaaaaacgcagagaaatgacagttttagac 38962202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 180 - 346
Target Start/End: Complemental strand, 22434724 - 22434561
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||| | |||||||| |||| ||| ||||||||| |||| |||||||||||||||    
T  22434724 ttaggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccatttt-aaacagaacaaaacggtcattcaattatcatttt 22434626  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  22434625 tgttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttagac 22434561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 182 - 345
Target Start/End: Original strand, 48526195 - 48526356
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||| | |  |||||||||||||| ||||||||| ||||||||||||||||||||||    
T  48526195 aggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 48526294  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaga 345  Q
    ||||||||||||||||||| || ||||| |  ||||| ||| ||||||||||| ||||||||||    
T  48526295 ttgcatttttcgtcctacc-cccatttt-attctccaaaaatgcagagaaatgacagttttaga 48526356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 180 - 297
Target Start/End: Complemental strand, 18764068 - 18763951
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| | ||| || |||||||||| |||||||||||||| ||||| |||||||||    
T  18764068 ttagacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttt 18763969  T
Q  280 tgttgcatttttcgtcct 297  Q
    ||||||||||||||||||    
T  18763968 tgttgcatttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 180 - 346
Target Start/End: Original strand, 51020794 - 51020959
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||| ||||| |||||||||  | |||| ||| | ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  51020794 ttaggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttt 51020893  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||||| || ||||| |  || || ||||| ||||||||| |||||||||||    
T  51020894 tgttgcatttttcgtcctaccccccatttt-attcttcaaaaacgtagagaaatgacagttttagac 51020959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 181 - 298
Target Start/End: Complemental strand, 54995614 - 54995498
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |  || ||||||||||||||||||||||| |||||||||| ||||| ||||    
T  54995614 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-tttt 54995516  T
Q  281 gttgcatttttcgtccta 298  Q
    ||||||||||||||||||    
T  54995515 gttgcatttttcgtccta 54995498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 179 - 346
Target Start/End: Original strand, 45082428 - 45082592
Alignment:
Q  179 attaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattt 278  Q
    |||||| |||||||| ||||||||| ||||||||||| ||||||||||| |  ||  ||||||||||||||||||||||| |||||||||||||||||||    
T  45082428 attaggtttaattacgcttttggtcatcgtgttttggtctactcacgaactg-gttttgcccttttaaaatagaacaaaacggtccttcaattatcattt 45082526  T
Q  279 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||||||| || ||||| |  ||||| |||| |||||||||| || ||||||||    
T  45082527 ttgttgcatttttcgtcctacc-cccatttt-attctccaaaaacacagagaaatgacaattttagac 45082592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 182 - 311
Target Start/End: Complemental strand, 10258433 - 10258304
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||| |||  ||||| ||  |||||||||||||||||    
T  10258433 aggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatttttg 10258334  T
Q  282 ttgcatttttcgtcctacctcctattttca 311  Q
    ||||| |||| ||| |||| ||||||||||    
T  10258333 ttgcagttttagtcttaccccctattttca 10258304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 300
Target Start/End: Complemental strand, 20958403 - 20958288
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    |||||||||||||||| |||||||| ||||||||||||||||||| | ||||||||||||||||| ||||||||   |||||||||||||||||||||||    
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgtt 20958304  T
Q  284 gcatttttcgtcctacc 300  Q
    |||||||| ||||||||    
T  20958303 gcattttt-gtcctacc 20958288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 186 - 346
Target Start/End: Complemental strand, 2118837 - 2118679
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    |||||||||||||||||| |||||||||||||| |||| |||| | |||||  |||||||||| | ||||||| |||| |||||||||||||||||||||    
T  2118837 ttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgttgc 2118738  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||| || ||||| |  ||||| ||||||||||||||   ||||||||||    
T  2118737 atttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaataatagttttagac 2118679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 181 - 297
Target Start/End: Original strand, 48293592 - 48293708
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||  ||||| |  ||||||| | |||||||| || |||||||||||||||||    
T  48293592 taggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcattttt 48293691  T
Q  281 gttgcatttttcgtcct 297  Q
    |||||||||||| ||||    
T  48293692 gttgcatttttcatcct 48293708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 201 - 300
Target Start/End: Complemental strand, 43243807 - 43243708
Alignment:
Q  201 gtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacc 300  Q
    |||||||||||||||||||||||||||| | ||| ||||||||||||| |||||||||| || |||||||||||||||||||||||||||| ||||||||    
T  43243807 gtcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctacc 43243708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 183 - 300
Target Start/End: Complemental strand, 35363146 - 35363028
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgccctttt-aaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| | || |||| ||||| |||| | ||||||| |||| |||||||||||||||||    
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttg 35363047  T
Q  282 ttgcatttttcgtcctacc 300  Q
    ||||||||||||| |||||    
T  35363046 ttgcatttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 181 - 297
Target Start/End: Complemental strand, 48713893 - 48713777
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||| ||||||||||||||  | |||||||||| ||||||||| |||| | ||| ||| ||||||||| |||||||||| ||||||||||||||||||||    
T  48713893 taggtttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcattttt 48713794  T
Q  281 gttgcatttttcgtcct 297  Q
    |||||||||||||||||    
T  48713793 gttgcatttttcgtcct 48713777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 186 - 309
Target Start/End: Original strand, 16690939 - 16691062
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||| |||||||||| ||||||||  |||||||||||| | ||||||||  ||||||| | ||||||||  ||||||||||||||||||||||||    
T  16690939 ttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgttgc 16691038  T
Q  286 atttttcgtcctacctcctatttt 309  Q
    ||||||||||||||| || |||||    
T  16691039 atttttcgtcctacccccgatttt 16691062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 177 - 300
Target Start/End: Complemental strand, 44892699 - 44892576
Alignment:
Q  177 taattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcat 276  Q
    |||||| ||||||||| | ||||||||||||||||||| ||||||||||||| | || ||||| |||||||| |||||||||  ||| |||||||||  |    
T  44892699 taattaagcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatatt 44892600  T
Q  277 ttttgttgcatttttcgtcctacc 300  Q
    ||||||||||||||||||||||||    
T  44892599 ttttgttgcatttttcgtcctacc 44892576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 181 - 289
Target Start/End: Original strand, 48708293 - 48708401
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    ||||||||||||||||||||||||  |||||||||||||  ||||||| |  |||||||||||||||| | |||||||  ||||||||||||||||||||    
T  48708293 taggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcattttt 48708392  T
Q  281 gttgcattt 289  Q
    |||||||||    
T  48708393 gttgcattt 48708401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 48295088 - 48294961
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||| |||||||| ||||||||||  |||||||||||||| ||| ||||  ||||||| | |||||||| ||| ||||||||||||||||||    
T  48295088 ggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgt 48294989  T
Q  283 tgcattttt-cgtcctacctcctatttt 309  Q
    ||||||||| ||||||||| || |||||    
T  48294988 tgcatttttccgtcctaccccccatttt 48294961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 201 - 309
Target Start/End: Complemental strand, 43281317 - 43281210
Alignment:
Q  201 gtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacc 300  Q
    |||||||||||||||||||||||||||| | ||| |||| |||||||| |||||||||  || |||||||||| ||||||||||||||||||||||||||    
T  43281317 gtcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctacc 43281219  T
Q  301 tcctatttt 309  Q
     || |||||    
T  43281218 ccccatttt 43281210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 16691616 - 16691491
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||| |||  |||||||| ||||||||||||| | ||||||||  ||||||  | |||||||| |||||| |||||| ||||||||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaac-ataacaaaattgtcctttaattattatttttgt 16691518  T
Q  283 tgcatttttcgtcctacctcctatttt 309  Q
    ||||||||||||| ||||||| |||||    
T  16691517 tgcatttttcgtcatacctcccatttt 16691491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 190 - 295
Target Start/End: Original strand, 20957196 - 20957301
Alignment:
Q  190 ttacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcattt 289  Q
    ||||| |||||||||||| |||||||| ||||||||||| | ||| | | ||||||||| | |||||||| ||||||||||||||| |||||||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  290 ttcgtc 295  Q
    ||||||    
T  20957296 ttcgtc 20957301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 44890518 - 44890643
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    ||||||||||| |||||||||| |||||||| |||| |||||||| | ||| ||||||||||||| |||||||||   ||||| ||||||  ||||||||    
T  44890518 gcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgtt 44890617  T
Q  284 gcatttttcgtcctacctcctatttt 309  Q
    ||||||||| || |||| || |||||    
T  44890618 gcatttttcatcataccccccatttt 44890643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 346
Target Start/End: Original strand, 17503973 - 17504135
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||| ||| ||||||||||  ||||| ||  ||||||||| | ||||||||  ||| |||| ||||| ||  |||||  || |||||| |||     
T  17503973 aggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtccta-aactatcatgtttt 17504071  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||| |||| |||||||||||||||||||| ||||||||||| ||||||||| |||||||||||    
T  17504072 ttgcagttttagtcctacctcctattttcaa-ctccagaaacgtagagaaatgacagttttagac 17504135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 346
Target Start/End: Complemental strand, 12503913 - 12503819
Alignment:
Q  251 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||| |||||||||| ||||||||||||||||||||||||| |||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 12503819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 182 - 253
Target Start/End: Complemental strand, 16318322 - 16318251
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |  |||||||||||||||| ||||    
T  16318322 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 176 - 309
Target Start/End: Complemental strand, 30598072 - 30597940
Alignment:
Q  176 ataattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatca 275  Q
    |||||| ||||| |||||||||||||||||||||||||| || ||||||| |||| || ||| |  ||| |||| ||||||||| |||| | |||||| |    
T  30598072 ataatttggcttgattacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatcgaacaaaatcgtccctaaattat-a 30597974  T
Q  276 tttttgttgcatttttcgtcctacctcctatttt 309  Q
    ||||||||||| |||| |||||| | ||||||||    
T  30597973 tttttgttgcacttttggtcctaacccctatttt 30597940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 355
Target Start/End: Complemental strand, 40160633 - 40160466
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||| |||||||||| |  ||||| || |||||||||| ||||| ||||  ||| |||| ||||||||  |||||  || |||||| ||| ||||    
T  40160633 ttaattacatttttggtccttgcattttgaccaactcacgaaaatagtcatgcctctttcaaattgaacaaaaccgtccta-aactatcatgttttttgc 40160535  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttaga 355  Q
    | |||| ||| |||||||||||||||| ||||||||||| |||||||  |||||||||| | ||||||||    
T  40160534 agttttagtcttacctcctattttcaa-ctccagaaacgtagagaaaatgcagttttaggcagttttaga 40160466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 241 - 309
Target Start/End: Original strand, 43242328 - 43242396
Alignment:
Q  241 ttttaaaatagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctatttt 309  Q
    |||||||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||| |||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaatttt 43242396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 183 - 291
Target Start/End: Original strand, 55189528 - 55189636
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||| | ||||| ||||||||||||| |||| |||  ||| | ||  |||||||||||||||||||||||| ||| |||||||||||||||||     
T  55189528 ggcttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcatttttgc 55189627  T
Q  283 tgcattttt 291  Q
    | |||||||    
T  55189628 tacattttt 55189636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 344
Target Start/End: Original strand, 34789375 - 34789542
Alignment:
Q  176 ataattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatca 275  Q
    |||||| |||||||||||||||||||||||    ||||| || |||||||||| | |||||  | |||| |||| ||||||||| |||||| || ||| |    
T  34789375 ataatttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-a 34789473  T
Q  276 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | ||| ||||| |||| |||||| ||||   |||||||||||||||||||| | ||||| || ||||||    
T  34789474 tgttttttgcagttttagtcctatctccctatttcaaactccagaaacgcacataaatgacaattttag 34789542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 180 - 344
Target Start/End: Complemental strand, 12593572 - 12593409
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||||||||||||||||||||||||| |  ||||| || |||||||||||| ||| | ||  ||| |||| ||||||||| |||  | || ||| || ||    
T  12593572 ttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtctgtaaactat-atatt 12593474  T
Q  280 tgttgcatttttcgtcctacct-cctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | ||||| |||| |||||| || ||||||||| ||||||||||||||| || |||| |||||||||    
T  12593473 ttttgcagttttagtcctatctccctattttc-aactccagaaacgcacaggaatgacagttttag 12593409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 179 - 344
Target Start/End: Complemental strand, 34789933 - 34789768
Alignment:
Q  179 attaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattt 278  Q
    ||||| ||||||||||||||||||||| |  ||||| || |||||||||||| ||||| ||  ||| |||| ||||||||| |||| | || |||   ||    
T  34789933 attagacttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtt 34789834  T
Q  279 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    || ||||| |||| |||||| ||||   |||| ||||||| ||||||| | ||||| |||||||||    
T  34789833 tttttgcagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttag 34789768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 344
Target Start/End: Complemental strand, 46737203 - 46737041
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    ||||||||||||||||||||||||| |  ||||| || |||||||||||| ||||| ||  ||| |||| ||||||||| |||| | || ||| || |||    
T  46737203 taggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgttt 46737105  T
Q  281 gttgcatttttcgtccta-cctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
     ||||| |||| ||| || | ||||| | || ||||||||||||||| ||||||| |||||||||    
T  46737104 tttgcagttttagtcatatcttccta-tctccaactccagaaacgcacagaaatgacagttttag 46737041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 12593023 - 12593184
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||     |||| || |||||||||| | ||| | || |||| |||| ||||||||| |||||| || ||| || |||     
T  12593023 aggcttaattacacttttggtcctaccagtttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaatcgtccttaaactat-atgtttt 12593121  T
Q  282 ttgcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| ||||  ||||| |||| ||||||||| ||||||||||||| ||||||| |||||||||    
T  12593122 ttgcaattttaatcctatctccctattttcaa-ctccagaaacgcacagaaatgacagttttag 12593184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 344
Target Start/End: Original strand, 19528867 - 19529030
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    ||||||||||||||||||||||||| |  ||||| || | |||||||||| ||||| ||  ||| |||| ||| ||||| |||| | || |||   ||||    
T  19528867 taggcttaattacacttttggtccttgcattttgaccaattcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatatgtttt 19528966  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
     ||||| |||| |||||| ||||   |||| |||||| |||||||| ||||||| |||||||||    
T  19528967 tttgcagttttagtcctatctccctatttccaactccggaaacgcacagaaatgacagttttag 19529030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 344
Target Start/End: Complemental strand, 24336307 - 24336149
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    |||||||||||||||| ||||||  ||||| |   ||||||||| | ||||||||  ||| |||| ||||||||  || | | ||||||||| ||| |||    
T  24336307 cttaattacacttttgatcctcgcattttgacaagctcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgttcctaaattatcatgttttttg 24336208  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    |  |||| |||||||| | ||||||||| ||||||||||| | ||||||||||| |||||    
T  24336207 ctcttttagtcctaccccatattttcaa-ctccagaaacgtatagaaatggcagctttag 24336149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 344
Target Start/End: Original strand, 34807114 - 34807277
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    ||||||||||||||||||||||||| |  |||||  | |||||||||||| ||| | ||  ||| |||| ||||||||| |||| | || |||   ||||    
T  34807114 taggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatgtttt 34807213  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
     ||||| |||| |||||| ||||   |||| ||||||||||||||| | ||||| |||||||||    
T  34807214 tttgcagttttagtcctatctccatatttccaactccagaaacgcacataaatgacagttttag 34807277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 186 - 344
Target Start/End: Original strand, 14439831 - 14439988
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||| |||||||||| |  ||||| || |||||||||||| ||| | || |||| ||||  |||||||| |||| | || ||| || ||| ||||    
T  14439831 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcataccttttttaaattaaacaaaatcgtccctaaactat-atgttttttgc 14439929  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | |||| |||||| ||||   |||| ||||||||||||||| ||||||| |||||||||    
T  14439930 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 14439988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 178 - 344
Target Start/End: Complemental strand, 28465632 - 28465467
Alignment:
Q  178 aattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatt 277  Q
    |||| |||||||||||||||||||||||    ||||| || |||||||||| | |||||  | |||| |||| ||||||||| |||||| || ||| ||     
T  28465632 aatttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atg 28465534  T
Q  278 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||| ||||| |||| |||||| ||||   |||| ||||||| ||||||| | |||| ||||||||||    
T  28465533 ttttttgcaattttagtcctatctccctatttccaactccataaacgcacataaatagcagttttag 28465467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 346
Target Start/End: Original strand, 35193345 - 35193469
Alignment:
Q  220 ctcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccag 319  Q
    ||||||||| | ||||| ||  ||| |||| ||||||||| |||| | || ||| || ||| ||||| |||| |||||| ||||||||||||| || |||    
T  35193345 ctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactat-atgttttttgcagttttagtcctatctcctattttcaa-cttcag 35193442  T
Q  320 aaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||| |||||||||||    
T  35193443 aaacgcagagaaatgacagttttagac 35193469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 344
Target Start/End: Complemental strand, 55677505 - 55677343
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||||||||||||| || ||||| || |||||||||||| ||||| ||  ||| |||| ||||||||| |||  | || |||   ||||     
T  55677505 aggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgttttt 55677406  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    || || |||| |||||| ||||   |||| ||||||| ||||||| | ||||| |||||||||    
T  55677405 ttacaattttagtcctatctccctatttccaactccataaacgcacataaatgacagttttag 55677343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 282 - 346
Target Start/End: Complemental strand, 17504407 - 17504343
Alignment:
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||| |||| || ||||||||||||||  ||||| ||||||||||||||||| |||||||||||    
T  17504407 ttgcaattttagtactacctcctatttttcaactctagaaacgcagagaaatgacagttttagac 17504343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 343
Target Start/End: Complemental strand, 35193852 - 35193691
Alignment:
Q  179 attaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattt 278  Q
    ||||||||||||||||||||||||||| |  |||||     ||||||||| | ||||||||  ||| ||||  |||||||  |||||  || |||||| |    
T  35193852 attaggcttaattacacttttggtccttgcattttgataagctcacgaaaatggtcctgcctctttcaaatctaacaaaaccgtccta-aactatcatgt 35193754  T
Q  279 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagtttta 343  Q
    || |||   |||| ||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  35193753 tttttgatgttttagtcatacctcctattttcaa-ctccagaaacgcagag-aatggcagtttta 35193691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 44220861 - 44220805
Alignment:
Q  244 taaaatagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacc 300  Q
    ||||| |||||||||| |||||||| |||||||||||||| |||||||||| |||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacc 44220805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 344
Target Start/End: Complemental strand, 229702 - 229545
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    |||||||||||||||||| |||  ||||| ||  ||||||||| | ||| ||||  ||| ||||  |||||||| |||||| || |||||| ||| ||||    
T  229702 ttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgcctctttcaaatcaaacaaaatcgtccttaaactatcatgttt-ttgc 229604  T
Q  286 atttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | ||||  |||||||||| ||||||| ||||||||||||||| |||| || || ||||||    
T  229603 agttttaatcctacctccttattttc-aactccagaaacgcacagaagtgacaattttag 229545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 344
Target Start/End: Complemental strand, 21034784 - 21034622
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||| |||||||||| |  ||||| || |||||||||||| |||||  |  ||| |||| ||||||||| |||| | || |||  |||||     
T  21034784 aggcttaattacaattttggtccttgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgtccctgaactatattttttt 21034685  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| |||| || ||| ||||   |||| |||||||||||| || | ||||| |||||||||    
T  21034684 ttgcagttttagttctatctccctatttccaactccagaaacacacaaaaatgacagttttag 21034622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 33689826 - 33689912
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtcctt 266  Q
    |||||||||||||||||||||||||| |  ||||| || |||||| ||||| ||||| ||  ||| |||| ||||||||| ||||||    
T  33689826 ttaggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcgtcctt 33689912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 344
Target Start/End: Original strand, 54440573 - 54440729
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    ||||||||||||||||||||| |  ||||| || |||||||||||| ||||| ||  ||| |||| ||||||||| |||| | || |   || ||| |||    
T  54440573 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact---atgttttttg 54440669  T
Q  285 catttttcgtcctacct-cctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    || |||| |||||| || ||||||||| |||| |||||| ||| ||||||| |||||||||    
T  54440670 cagttttagtcctatctccctattttc-aacttcagaaatgcacagaaatgacagttttag 54440729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 344
Target Start/End: Original strand, 229159 - 229321
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||| ||||||||||||||||||||||| ||||| ||  ||| ||||| | ||| ||||  ||| |||| ||||||||| |||||| || |||||| |||    
T  229159 taggtttaattacacttttggtcctcgtattttgaccagctcgcgaaaatggtcttgcctctttcaaattgaacaaaatcgtccttaaactatcatgttt 229258  T
Q  281 gttgcatttttcgtcctac-ctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
     ||||| |||| || |||| | | ||||||| ||||||| ||||||| | || || |||||||||    
T  229259 -ttgcagttttagttctactcccttattttc-aactccataaacgcacaaaagtgacagttttag 229321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 45838544 - 45838628
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtcc 264  Q
    ||||||||| |||||||||||||||| || ||||| || ||||||| |||| ||||| ||  ||| |||| ||||||||| ||||    
T  45838544 ttaggcttatttacacttttggtccttgtattttgaccaactcacgtaattggtcctacctcttttaaatcgaacaaaatcgtcc 45838628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 44219377 - 44219428
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcct 236  Q
    |||||||||||||||||||||||| ||||  || |||||||||||| |||||    
T  44219377 cttaattacacttttggtcctcgtattttaaccaactcacgaaattggtcct 44219428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 41608966 - 41608908
Alignment:
Q  178 aattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcct 236  Q
    ||||||||||||||||||||||||||||    ||||| || |||||||||||| |||||    
T  41608966 aattaggcttaattacacttttggtcctaccattttgaccaactcacgaaattggtcct 41608908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 344
Target Start/End: Original strand, 28465078 - 28465241
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||| ||||||||||||||| |||||    ||||| || ||| ||||||||  |||| ||  ||| |||| ||||||||| |||||| || ||| || ||    
T  28465078 ttagacttaattacacttttagtccttccattttgaccaacttacgaaattgatcctacctcttttaaatcgaacaaaatcgtccttaaactat-atgtt 28465176  T
Q  280 tgttgcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | ||||| |||| ||| || |||| ||||||||| ||||||||||||| | ||||| |||||||||    
T  28465177 ttttgcagttttagtcatatctccctattttcaa-ctccagaaacgcacataaatgacagttttag 28465241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 294
Target Start/End: Complemental strand, 55191318 - 55191208
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaatta---tcatttttgt 282  Q
    ||||||| | |||||||  |||||||||| | |||||| |||| | ||| |||| ||||||||||||| ||||| ||| || |||||   ||||||||||    
T  55191318 ttaattataattttggttttcgtgttttgacatactcatgaaaatggtcatgcc-ttttaaaatagaataaaattgtcttttaattactatcatttttgt 55191220  T
Q  283 tgcatttttcgt 294  Q
    |||| |||||||    
T  55191219 tgcacttttcgt 55191208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 344
Target Start/End: Complemental strand, 56077870 - 56077710
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||| ||||||||||    ||||| || |||||||||| | ||| |  | |||| |||| ||||||||| |||||| || ||| || ||| |    
T  56077870 ggcttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 56077772  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    |||| |||| |||||| ||||   |||| ||||| ||||||||| | ||||| |||||||||    
T  56077771 tgcagttttagtcctatctccctatttccaactctagaaacgcacaaaaatgacagttttag 56077710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 344
Target Start/End: Complemental strand, 24852010 - 24851851
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    |||||||| |||||||||||| |  ||||| || ||||||||||||  |||| ||  ||| |||| ||||||||| |||| | || |||   |||| |||    
T  24852010 cttaattatacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttg 24851911  T
Q  285 catttttcgtccta-cctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    || |||| |||||| | | ||| |||| ||||||||||||||| |||||||  ||||||||    
T  24851910 cagttttagtcctatctttcta-tttccaactccagaaacgcacagaaatgaaagttttag 24851851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 346
Target Start/End: Original strand, 40160093 - 40160255
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||| ||||| ||| ||  ||||  ||  ||||||||| ||||| ||||  ||| |||| ||||||||  |||| | || ||| || |||     
T  40160093 aggcttaattacatttttgatccccgcattttaaccagctcacgaaaatagtcatgcctcttttaaatcgaacaaaaccgtccctaaactat-atgtttt 40160191  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||| |||| |||||||||||||||||| ||||| | ||||   |||||||| |||||||||||    
T  40160192 ttgcagttttagtcctacctcctattttc-aactctataaacatggagaaatgacagttttagac 40160255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 160; Significance: 3e-85; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 182 - 369
Target Start/End: Complemental strand, 13225185 - 13224998
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| ||||||||| ||||||||||||||||||||||    
T  13225185 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 13225086  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  13225085 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 13224998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 179 - 369
Target Start/End: Original strand, 19176286 - 19176476
Alignment:
Q  179 attaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  19176286 attaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 19176385  T
Q  279 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||| |||||||||| |||||| ||||||    
T  19176386 ttgttgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccatatgct 19176476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 186 - 369
Target Start/End: Complemental strand, 12572393 - 12572210
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||| ||| ||||||||| ||||||||| ||||||||||||||||||||||||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  12572293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttaggcggttttagatctacccctatgct 12572210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 182 - 369
Target Start/End: Complemental strand, 11657003 - 11656816
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||| | |||||||||| ||||||||||||||||||||||||||||||||    
T  11657003 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttg 11656904  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || || |||| |||||||||||||    
T  11656903 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttaggcgattgtagacctacccctatgct 11656816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 183 - 369
Target Start/End: Complemental strand, 41681679 - 41681493
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| | ||||| ||||||||||| ||||||||| |||||||||||||||||||||||    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41681580  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||    
T  41681579 tgcatttttcgtcctacctgctattttcaaactccagaaacgcagagaaatggtagttttaggcggttttagacctacccctatgct 41681493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 182 - 369
Target Start/End: Original strand, 44831246 - 44831433
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  44831246 aggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttg 44831345  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||| |||||||||| || ||||||||||    
T  44831346 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttaggcggttttagacctgcccctatgct 44831433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 186 - 369
Target Start/End: Original strand, 9928912 - 9929095
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    |||||||||||||||||||||||||||||  |||||||||||| | ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||| ||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttaggcggttttagacctacccttatgct 9929095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 185 - 369
Target Start/End: Complemental strand, 33328683 - 33328499
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    |||||||| |||||||||||||||||||| |||||||||||||| ||||| ||| ||||||||| | ||||||| |||||||||||||||||||||||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||    
T  33328583 catttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttaggcggttttaaacctacccctatgct 33328499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 180 - 334
Target Start/End: Complemental strand, 34541096 - 34540942
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||| | ||||||||||||||||||||||||||||    
T  34541096 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttt 34540997  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatg 334  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  34540996 tgttgcatttttcgtcctacctcctattttcaaacttaagaaacgcagagaaatg 34540942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 184 - 369
Target Start/End: Complemental strand, 31133764 - 31133579
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||| ||||||||| |||||||||||||| |||||||||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgtt 31133665  T
Q  284 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||| | ||||||  |||||||||| ||| | |||||||    
T  31133664 gcatttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggttttatgcggttttagacctatctctatgct 31133579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 180 - 369
Target Start/End: Original strand, 33742919 - 33743107
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||||||||||| ||||||||  |||| |||||||||||||||    
T  33742919 ttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaacaaac-ggtctttcaattatcatttt 33743017  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    || ||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||| | |||||||| |||||||||||||    
T  33743018 tgatgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatgct 33743107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 180 - 346
Target Start/End: Complemental strand, 19176838 - 19176673
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  19176838 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19176739  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||| ||||| |||||||||||    
T  19176738 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagacaaatgacagttttagac 19176673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 181 - 343
Target Start/End: Original strand, 41681132 - 41681292
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  41681132 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 41681231  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagtttta 343  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| ||||||||    
T  41681232 gttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagtttta 41681292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 182 - 346
Target Start/End: Complemental strand, 9930203 - 9930040
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9930203 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttg 9930104  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||| || ||||| |  ||||| || ||||||||||||  ||||||||||    
T  9930103 ttgcatttttcgtcctaccccccatttt-attctccaaaagcgcagagaaatgatagttttagac 9930040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 180 - 346
Target Start/End: Original strand, 11656452 - 11656618
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||  |||||||| ||||||||||||| ||||||    
T  11656452 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttt 11656551  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactcc-agaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||||| || ||||| |  |||| | |||||||||||||||||||||||||||    
T  11656552 tgttgcatttttcgtcctaccccccatttt-attctccaaaaaacgcagagaaatggcagttttagac 11656618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 181 - 334
Target Start/End: Original strand, 4629795 - 4629948
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    ||||||||||| |||||||  | ||||||||||||| || |||||||| | ||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  4629795 taggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcattttt 4629894  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatg 334  Q
     |||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  4629895 attgcatttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatg 4629948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 180 - 346
Target Start/End: Original strand, 12571860 - 12572026
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||||||||||| ||||||||| |||| |||||||||||||||    
T  12571860 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcatttt 12571959  T
Q  280 tgttgcatttttcgtccta-cctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||| || || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  12571960 tgttgcatttttcgtcctaaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 12572026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 181 - 346
Target Start/End: Original strand, 31133218 - 31133382
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| | |||| |||||||||||| | |||||||  ||||||||| ||||||||||    
T  31133218 taggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcattttt 31133317  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||||    
T  31133318 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 31133382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 173 - 346
Target Start/End: Complemental strand, 44831800 - 44831628
Alignment:
Q  173 tttataattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaatta 272  Q
    |||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||| | ||||||| ||||||||| ||||||||| |||  ||||||||    
T  44831800 tttaaaattaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaatta 44831701  T
Q  273 tcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||| |||||||| || ||||| |  ||||| |||| |||||||||| |||||||||||    
T  44831700 tcatttttgttgcatttttggtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttagac 44831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 186 - 346
Target Start/End: Original strand, 33328161 - 33328320
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||||||||||||||||||||||||||||||||||||| |  || ||||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 33328260  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||  | ||||| |  ||||| ||||||| ||||||| |||||||||||    
T  33328261 atttttcgtcctaccctcgatttt-attctccaaaaacgcaaagaaatgacagttttagac 33328320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 187 - 346
Target Start/End: Original strand, 13224645 - 13224802
Alignment:
Q  187 taattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgca 286  Q
    ||||||||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||| |||||||||   ||||||||||||||||||||||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  287 tttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  13224744 tttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 13224802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 346
Target Start/End: Complemental strand, 9178180 - 9178019
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |  || |||||| |||||| ||||||||| |||||||||| ||||||||||||    
T  9178180 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgt 9178081  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||| || |||| || ||||| |  ||| | ||||||||||||||| || ||||||||    
T  9178080 tgcatttttcatcttacc-cccatttt-attctcaaaaaacgcagagaaatgacaattttagac 9178019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 181 - 291
Target Start/End: Complemental strand, 11337069 - 11336959
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||| |||| |||||||||||| |||| |||| |||| ||||||||||||||||    
T  11337069 taggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcattttt 11336970  T
Q  281 gttgcattttt 291  Q
    |||||||||||    
T  11336969 gttgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 275 - 369
Target Start/End: Original strand, 9177724 - 9177818
Alignment:
Q  275 atttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||| ||| |||||| |||||||||||||||||||| ||||||||| ||||||||| |||||||||| |||||||||||||    
T  9177724 atttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttaggcggttttagacctacccctatgct 9177818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 346
Target Start/End: Complemental strand, 4630328 - 4630175
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||||||||| || ||||||||||| |||||||||||||| |||||||  |||||||| |||| | || |||||||||||||      |||||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaatta------ttgttgc 4630235  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||| ||||||| || ||||| |  ||||| ||||||||| ||||| |||||||||||    
T  4630234 atttttcatcctaccccccatttt-attctccaaaaacgcagaaaaatgacagttttagac 4630175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 295
Target Start/End: Complemental strand, 8074097 - 8073985
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||| ||| |||||||||||||||||||||||||| |||||||| |  || || |||||||||| ||||||||||  |||||||||||||| |||||    
T  8074097 aggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca-ttttg 8073999  T
Q  282 ttgcatttttcgtc 295  Q
    ||||||||| ||||    
T  8073998 ttgcattttacgtc 8073985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 180 - 309
Target Start/End: Original strand, 10918123 - 10918252
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||| ||||||||| |||| ||||||||||||||  |||||||||||||| ||| ||||   |||||| ||| |||||| ||||||||| |||||||||    
T  10918123 ttaggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcatttt 10918222  T
Q  280 tgttgcatttttcgtcctacctcctatttt 309  Q
    ||||||||||||| || |||| || |||||    
T  10918223 tgttgcatttttcatcataccccccatttt 10918252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 235 - 346
Target Start/End: Complemental strand, 33743412 - 33743302
Alignment:
Q  235 ctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatg 334  Q
    ||||| |||||||| ||||||||| |||  |||||||||||||||||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||     
T  33743412 ctgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaata 33743314  T
Q  335 gcagttttagac 346  Q
     |||||||||||    
T  33743313 acagttttagac 33743302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 28254971 - 28254812
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    |||||||||||||||||||||| |  ||||| || |||||||||||| ||||| ||  ||| |||| ||||||||| |||| | || ||| ||  || ||    
T  28254971 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-ataattttt 28254873  T
Q  284 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||| |||| |||||| ||||   |||| ||||||||||||||| ||||||| |||||||||    
T  28254872 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 28254812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 180 - 344
Target Start/End: Original strand, 5730814 - 5730977
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||    ||||| || |||||||||| |||||||  | |||| ||||  |||||||| |||||| || ||| || ||    
T  5730814 ttaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatagtcctatcttttttaaatcaaacaaaatcgtccttaaactat-atgtt 5730912  T
Q  280 tgttgcatttttcgtcctacct-cctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | ||||  |||| ||||||||| ||||||||  ||||||||||||| | ||||||| |||||||||    
T  5730913 ttttgctgttttagtcctacctccctatttt-taactccagaaacgtacagaaatgacagttttag 5730977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 179 - 344
Target Start/End: Complemental strand, 35427362 - 35427198
Alignment:
Q  179 attaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattt 278  Q
    |||||||||||||||||||||||||||||  ||||| || |||||||||| | || || ||  ||| |||  ||||||||| |||| | |||||| || |    
T  35427362 attaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattat-atat 35427264  T
Q  279 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    || ||||| |||| |||| | ||||   |||| ||||||| ||||||| ||||||| |||||||||    
T  35427263 tttttgcagttttagtcccatctccctatttccaactccataaacgcacagaaatgacagttttag 35427198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 43958264 - 43958311
Alignment:
Q  262 tccttcaattatcatttttgttgcatttttcgtcctacctcctatttt 309  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctaccctctatttt 43958311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 15255848 - 15255934
Alignment:
Q  178 aattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtcc 264  Q
    |||||||||||||||||||||||||||| |  ||||| || |||||||||||| ||||| ||  ||| |||| ||||||||| ||||    
T  15255848 aattaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtcc 15255934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 180 - 326
Target Start/End: Original strand, 16578105 - 16578250
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||| ||||||| || |  ||||| || |||||||||||| ||||| ||  ||| |||| ||||||||| |||| | |||||| || ||    
T  16578105 ttaggcttaattacatttttggttcttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaattat-atgtt 16578203  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgca 326  Q
    | ||||| |||| |||||| ||||   |||| |||||||||||||||    
T  16578204 ttttgcagttttggtcctatctccctatttccaactccagaaacgca 16578250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 344
Target Start/End: Complemental strand, 6115660 - 6115496
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||| |||||||||||| || ||||| || |||| ||||||| ||||| ||  ||| |||| ||||||||| |||| | || |||   |||    
T  6115660 ttaggcttaattatacttttggtccttgtattttgaccaactcgcgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttt 6115561  T
Q  280 tgttgcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | ||| | |||| || ||| |||| ||||||| ||||| ||||||||| ||||||| |||||||||    
T  6115560 ttttgtagttttagttctatctccttattttc-aactcaagaaacgcacagaaatgacagttttag 6115496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 183 - 343
Target Start/End: Original strand, 18049590 - 18049750
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||| ||||||||||||||||||    ||||| || |||||||||| | || ||  | |||| |||| ||||||||| |||||| || |||   |||| |    
T  18049590 ggctcaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 18049689  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagtttta 343  Q
    |||| |||| |||||| ||||   |||| ||||||||||||||| ||||||| ||||||||    
T  18049690 tgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 18049750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 9177665 - 9177700
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggc 216  Q
    ||||||||||||||||||||||||||||||||||||    
T  9177665 taggcttaattacacttttggtcctcgtgttttggc 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 344
Target Start/End: Original strand, 9796720 - 9796886
Alignment:
Q  177 taattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcat 276  Q
    ||||| ||||||||||||||||||||||| |  ||||| || |||||| ||||| ||||| ||  ||| |||| |||||||||  ||| | || ||| ||    
T  9796720 taatttggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcatccataaactat-at 9796818  T
Q  277 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
     ||| ||||| |||| ||| || ||||   |||| ||||||| ||||||| ||||||| |||||||||    
T  9796819 gttttttgcagttttagtcatatctccctatttccaactccataaacgcacagaaatgacagttttag 9796886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 599531 - 599692
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||| |||||||||| |  ||||| || |||||||||||| ||| | ||  ||| |||| |||||||||  ||| | |||||| || |||     
T  599531 aggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcatccctaaattat-atgtttt 599629  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| |||| ||| || ||||   |||| ||||||||||||||| | ||||| |||||||||    
T  599630 ttgcagttttagtcatatctccctatttccaactccagaaacgcacacaaatgacagttttag 599692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 344
Target Start/End: Complemental strand, 18428305 - 18428147
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||||||||||||||    ||||| || |||||||||| | |||||  | |||| |||| ||||||||| |||||| || |||   |||| ||||    
T  18428305 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 18428206  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | ||||  ||||| ||||   |||| ||||||||||||||| | ||||| |||||||||    
T  18428205 agttttactcctatctccctatttccaactccagaaacgcacaaaaatgacagttttag 18428147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 346
Target Start/End: Original strand, 18805267 - 18805324
Alignment:
Q  288 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||| |||||||||||||| ||||| |||||||||| |||||||||| |||||||||||    
T  18805267 ttttagtcctacctcctatcttcaa-ctccagaaacacagagaaatgacagttttagac 18805324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 10919732 - 10919691
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactca 223  Q
    ||||||||||| ||||||||||||||||||||| ||||||||    
T  10919732 aggcttaattatacttttggtcctcgtgttttgacctactca 10919691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 346
Target Start/End: Complemental strand, 28877432 - 28877274
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||||||||||||||||  ||||| || |||||||||| | ||  | ||  ||| |||| ||||||||| |||| | || |||||| ||| ||||    
T  28877432 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttatacctctttcaaattgaacaaaattgtccct-aactatcatgttttttgc 28877334  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
      |||| ||||||||| |||||||  ||||||||||||| | | ||||| || ||||||||    
T  28877333 tgttttagtcctaccttctatttt-taactccagaaacgtatataaatgacaattttagac 28877274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 344
Target Start/End: Complemental strand, 41260816 - 41260647
Alignment:
Q  174 ttataattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattat 273  Q
    ||||| ||||||||||||| |||||||||| | |  |||||  | ||||||||||||  || | ||  ||| |||| ||||||||| |||| | || |||    
T  41260816 ttatatttaggcttaattatacttttggtcattgcattttgatcaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactat 41260717  T
Q  274 catttttgttgcatttttcgtcctacct-cctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
     || ||| ||||| |||| |||||| || ||||||||| ||||||||||||||| | ||||| |||||||||    
T  41260716 -atgttttttgcagttttagtcctatctccctattttc-aactccagaaacgcacataaatgacagttttag 41260647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 43958206 - 43958256
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaatt 230  Q
    |||| |||||||| |||||||||| ||||||||||  ||||||||||||||    
T  43958206 ttagacttaattatacttttggtcttcgtgttttgatctactcacgaaatt 43958256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 344
Target Start/End: Original strand, 42035773 - 42035932
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    |||||||||||||||||||||||   ||||| || |||||||||| | || || ||  ||| |||| ||||||||| |||| | || ||| || | | ||    
T  42035773 gcttaattacacttttggtcctcacattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactat-atatatttt 42035871  T
Q  284 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||| |||| |||||| ||||   |||| ||||||| ||||||| | ||||| |||||||||    
T  42035872 gcaattttagtcctatctccctatttctaactccataaacgcacaaaaatgacagttttag 42035932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 158; Significance: 5e-84; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 180 - 369
Target Start/End: Complemental strand, 19591073 - 19590884
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  19591073 ttaggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19590974  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  19590973 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 19590884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 181 - 369
Target Start/End: Original strand, 32004612 - 32004800
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||    
T  32004612 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcattttt 32004711  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||| |||||||||||||    
T  32004712 gttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagttttaagcggttttagacctacccctatgct 32004800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 180 - 369
Target Start/End: Complemental strand, 38859189 - 38859000
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  38859189 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttt 38859090  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||| || ||||||||||    
T  38859089 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttaggcggttttagacctgcccctatgct 38859000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 181 - 369
Target Start/End: Original strand, 2658837 - 2659025
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2658837 taggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 2658936  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||| |||| ||||||||    
T  2658937 gttgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggccgttttagacctacacctatgct 2659025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 35288903 - 35289089
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 35289002  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||| || |||||||||||||||||||| |||||||||| ||||||||  |||||||||| |||||||||||||    
T  35289003 tgcatttttcgtcctacttcatattttcaaactccagaaacacagagaaatgacagttttaagcggttttagacctacccctatgct 35289089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 180 - 369
Target Start/End: Complemental strand, 37787315 - 37787126
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| ||||||||  ||||||||| ||| ||||||||||||||||    
T  37787315 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttt 37787216  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | | |||||||| |||||||||||||    
T  37787215 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttttggcagttttagacctacccctatgct 37787126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 181 - 369
Target Start/End: Original strand, 34533789 - 34533977
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||| ||||||||| |||| ||||||||| ||||||||||||||||    
T  34533789 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcattttt 34533888  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| || |||||| | |||||||| |||||||||||||    
T  34533889 gttgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttaggcagttttagacctacccctatgct 34533977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 182 - 369
Target Start/End: Complemental strand, 19830965 - 19830779
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| | |||||| |||||||||| | ||||||| ||| ||||||||||||||||||    
T  19830965 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttg 19830866  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||| |||||||||||||    
T  19830865 ttgcattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttaggcggttttagacctacccctatgct 19830779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 179 - 366
Target Start/End: Original strand, 23952726 - 23952914
Alignment:
Q  179 attaggcttaattacacttttggtcctcgtgttttggcc-tactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatt 277  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||| ||| ||||||||||||| ||||||||| ||||||||||||||||||    
T  23952726 attaggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatt 23952825  T
Q  278 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctat 366  Q
    || ||||||||||||||||||||| |||||||||||| |||||||||||||||||||  |||||||| | |||||| | ||||||||||    
T  23952826 ttggttgcatttttcgtcctaccttctattttcaaaccccagaaacgcagagaaatgatagttttaggcagttttaaacctacccctat 23952914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 186 - 369
Target Start/End: Complemental strand, 4641983 - 4641803
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    |||||||||||||||||||||||||||||||||||||||   | | |||||| |||||||||| ||||||||| ||||||||||||||||||||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    || ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||  |||| |||||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacatacctctatgct 4641803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 196 - 369
Target Start/End: Original strand, 29099863 - 29100036
Alignment:
Q  196 ttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcatttttcgtc 295  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  296 ctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||| ||||||||| ||| ||||| |||||||||   |||||||| ||||| |||||||    
T  29099963 ctacctcctattttcaaaccccagaaacgtagataaatgacagttttaggaagttttagacctacctctatgct 29100036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 181 - 346
Target Start/End: Original strand, 19830418 - 19830582
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| ||||||||| |||||||||||||||||||||    
T  19830418 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19830517  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  19830518 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 19830582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 182 - 346
Target Start/End: Original strand, 37786766 - 37786929
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| | ||||||| ||||||||||||||||||||||    
T  37786766 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37786865  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  37786866 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 37786929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 183 - 346
Target Start/End: Original strand, 19590525 - 19590687
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590624  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||| ||||||| || ||||| |  ||||| |||| |||||||||| |||||||||||    
T  19590625 tgcatttttcatcctaccccccatttt-attctccaaaaacccagagaaatgacagttttagac 19590687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 183 - 346
Target Start/End: Complemental strand, 32005159 - 32004997
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||| | ||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  32005159 ggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgt 32005060  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  32005059 tgcatttttcgtcctactccccatttt-attctccaaaaacgcagagaaatgacagttttagac 32004997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 186 - 346
Target Start/End: Complemental strand, 29100393 - 29100234
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    |||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| ||||||||| |||| |||||||||||||||||||||    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 29100294  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||| |||||||| || ||||| |  ||||| ||||||||||||||  |||||||||||    
T  29100293 attttttgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttagac 29100234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 182 - 346
Target Start/End: Original strand, 38858642 - 38858805
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||| | ||||||| ||||||||| ||||||||| |||| |||||||||||||||||    
T  38858642 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttg 38858741  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||| |||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  38858742 ttgcatttttggtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 38858805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 38160948 - 38161067
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||| |||||||||| ||||||||||||| |||||    
T  38160948 ttaggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattatttt 38161047  T
Q  280 tgttgcatttttcgtcctac 299  Q
    ||||||||||||||||||||    
T  38161048 tgttgcatttttcgtcctac 38161067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 176 - 346
Target Start/End: Complemental strand, 35289453 - 35289284
Alignment:
Q  176 ataattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatca 275  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||||||||||||||    
T  35289453 ataaataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca 35289354  T
Q  276 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||| ||||||||||||||| |||| || ||||| |  ||| | ||||||||||||||   ||||||||||    
T  35289353 ttttggttgcatttttcgtcataccccccatttt-attctctaaaaacgcagagaaataatagttttagac 35289284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 181 - 346
Target Start/End: Complemental strand, 34534338 - 34534174
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||| |  |||||||| ||||||| ||||||||| |||||||||||||||||||||    
T  34534338 taggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcattttt 34534239  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||||| || ||||| |  ||||| |||  |||||||||| |||||||||||    
T  34534238 gttgcatttttcgtcctaccccccatttt-attctccaaaaaaacagagaaatgacagttttagac 34534174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 178 - 346
Target Start/End: Complemental strand, 2659390 - 2659223
Alignment:
Q  178 aattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatt 277  Q
    ||||||||||||||||| |||||||||||| ||||||||||| ||| |||| | ||| ||||||||||||| ||||||||| |||| |||||||||||||    
T  2659390 aattaggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatt 2659291  T
Q  278 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||| ||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  2659290 tttgttgcatttttcatcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 2659223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 186 - 346
Target Start/End: Original strand, 4641443 - 4641602
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||||||||||||||||||||||||| ||||||||||| | ||||||| ||||| ||| | ||||||| |||| |||||||||||||||||||||    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgttgc 4641542  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||| || ||||| |  ||||| ||| |||||||||||  ||||||||||    
T  4641543 atttttcgtcctaccccccatttt-attctccaaaaatgcagagaaatgatagttttagac 4641602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 176 - 346
Target Start/End: Complemental strand, 23953280 - 23953112
Alignment:
Q  176 ataattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatca 275  Q
    |||| |||||||| ||||| |||||||||||||||||||  |||||||||||| | |||| ||||||| |||| ||||||||| ||||||||||||||||    
T  23953280 ataaataggctta-ttacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatca 23953182  T
Q  276 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||||| |||| || ||||| |  ||||| ||||||||||||||  |||||||||||    
T  23953181 tttttgttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaataacagttttagac 23953112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 181 - 346
Target Start/End: Complemental strand, 4478247 - 4478083
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||| |||| |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||| |||| || || ||||||||||||||||||||    
T  4478247 taggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcattttt 4478148  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||| || | |||  ||| |  ||||| ||||||||||||||  |||||||||||    
T  4478147 gttgcatttttcgtcttatc-cctcattttattctccaaaaacgcagagaaataacagttttagac 4478083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 181 - 309
Target Start/End: Original strand, 28583437 - 28583565
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||| || |||||||||||||| | || ||||  ||||||||||||||||||||    
T  28583437 taggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcattttt 28583536  T
Q  281 gttgcatttttcgtcctacctcctatttt 309  Q
     ||||||||||||||||||| || |||||    
T  28583537 attgcatttttcgtcctaccccccatttt 28583565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 28584466 - 28584341
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    |||||||||||||||| ||||||||| ||||||||| |||||||||| ||| || |||||||||| |||||||||| |||||||||||||||||||||||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgtt 28584367  T
Q  284 gcatttttcgtcctacctcctatttt 309  Q
    | |||||||||| |||| || |||||    
T  28584366 gtatttttcgtcttaccccccatttt 28584341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 4477702 - 4477887
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||| ||| ||||    ||||| || | |||||||| | |||| |||  ||| |||| ||| ||||| |||| | || |||||| ||| |    
T  4477702 ggcttaattacactattgatccttacattttgaccaattcacgaaaatggtcccgcctcttttaaattgaataaaatcgtccctaaactatcatgttt-t 4477800  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||| |||| ||||||||||||||||||||||||||||||||||| |||||| ||||||| |   |||||||| |||||||||||||    
T  4477801 tgcagttttagtcctacctcctattttcaaactccagaaacgcagggaaatgacagtttttggtagttttagacctacccctatgct 4477887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 344
Target Start/End: Original strand, 9181534 - 9181692
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    |||||||||||||||||||||    ||||| || |||||||||| | |||||  | |||| |||| ||||||||| |||||| || ||| |||||| |||    
T  9181534 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-attttttttg 9181632  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    || |||| |||||| ||||   |||| ||||||||||||||| ||||||| |||||||||    
T  9181633 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 9181692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 344
Target Start/End: Complemental strand, 34595319 - 34595158
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||||||||||||||   ||||| || |||||||||| | |||||||   ||| |||| ||||||||| |||| | || |||||| |||     
T  34595319 aggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgcatcttttaaatcgaacaaaatcgtccctaaactatcatgttt- 34595221  T
Q  282 ttgcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| |||| || ||||| || ||||||| ||||||||||||||| ||||||| |||||||||    
T  34595220 ttgcagttttagtgctacccccttattttc-aactccagaaacgcacagaaatgacagttttag 34595158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 322
Target Start/End: Original strand, 49064033 - 49064171
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||| ||||| ||  ||||||||| | ||  ||||  ||| ||||||||||||||  ||| | || |||||| |||     
T  49064033 aggcttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaatcttccataaactatcatgttt- 49064131  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaa 322  Q
    ||||| |||| |||||| ||||||||||| |||||||||||    
T  49064132 ttgcacttttagtcctaactcctattttc-aactccagaaa 49064171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 180 - 344
Target Start/End: Original strand, 7732485 - 7732648
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||| |||||||||| |  |||||  | |||||||||||| ||||| ||  ||| |||| ||||||||| |||||| || ||| || ||    
T  7732485 ttaggcttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactat-atgtt 7732583  T
Q  280 tgttgcatttttcgtcctacct-cctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | ||||| |||| |||||| || ||||||||| ||||||| ||||||| | ||||| |||||||||    
T  7732584 ttttgcagttttagtcctatctccctattttc-aactccataaacgcacataaatgacagttttag 7732648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 183 - 344
Target Start/End: Original strand, 27245203 - 27245364
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    ||||||||||||||||||||||| |  ||||| || |||||||||||| ||||| ||  ||| |||| ||||||||| ||||   ||  ||   |||| |    
T  27245203 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccccaaaccatatgtttttt 27245302  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    |||| |||| |||||| |||||  |||| ||||||||||||||| |||||||  ||||||||    
T  27245303 tgcagttttagtcctatctccttatttccaactccagaaacgcacagaaatgatagttttag 27245364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 344
Target Start/End: Complemental strand, 48248141 - 48247977
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||    ||||| || |||||| ||| | |||||  | |||| |||| ||||||||| |||||| || |||   |||    
T  48248141 ttaggcttaattacacttttggtcctaccattttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttt 48248042  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | ||||| |||| |||| | ||||   |||| ||||||||||||||| ||||||| |||||||||    
T  48248041 ttttgcagttttagtcccatctccctatttccaactccagaaacgcacagaaatgacagttttag 48247977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 344
Target Start/End: Original strand, 26026320 - 26026478
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    |||||||||||||||||||| || ||||| ||  ||||||||||| ||| | ||  ||| |||| ||||||||| |||| | || |||   |||| ||||    
T  26026320 ttaattacacttttggtccttgtattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccataaactatatgtttttttgc 26026419  T
Q  286 atttttcgtcctacct-cctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | |||| ||| || || ||||||||| ||||||||||||||| ||||||| |||||||||    
T  26026420 agttttagtcttatctccctattttc-aactccagaaacgcacagaaatgacagttttag 26026478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 185 - 343
Target Start/End: Original strand, 9393738 - 9393894
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    |||||||||||||||| ||||||  |||||  |  ||||||||| | ||| ||||  ||| |||| ||||||||  |||||  || |||||| ||| |||    
T  9393738 cttaattacacttttgatcctcgcattttgatcagctcacgaaaattgtcttgcctctttcaaatcgaacaaaaccgtccta-aactatcatgttttttg 9393836  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagtttta 343  Q
    |  |||| |||||||||||||||||| |||||||||||| ||| |||||| ||||||||    
T  9393837 ctgttttagtcctacctcctattttc-aactccagaaacacagtgaaatgacagtttta 9393894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 186 - 344
Target Start/End: Complemental strand, 25637741 - 25637584
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||||||||||||||    ||||| || |||||||||| | |||||  | |||| |||| ||||||||| |||||| || ||| || ||| ||||    
T  25637741 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 25637643  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | |||| |||||| ||||   |||| |||||||||||| || ||||||| |||||||||    
T  25637642 agttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttag 25637584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 343
Target Start/End: Original strand, 25637193 - 25637357
Alignment:
Q  179 attaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattt 278  Q
    ||||||||||||||||||||||||||| |  | ||| || ||||| |||||| ||||| ||  ||| |||| ||||||||| |||| | || |||   ||    
T  25637193 attaggcttaattacacttttggtccttgcatattgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtt 25637292  T
Q  279 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagtttta 343  Q
    || ||| | |||| |||||| ||||   |||| ||||||||||||||| | ||||| ||||||||    
T  25637293 tttttgtagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagtttta 25637357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 346
Target Start/End: Original strand, 35578902 - 35579060
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    |||||||||||||||||| | |  ||||| ||  ||||| ||| | ||||||||  ||| |||| ||||||||  ||| |  || |||||| ||| ||||    
T  35578902 ttaattacacttttggtcattgcattttgaccagctcacaaaaatggtcctgccactttcaaatcgaacaaaaccgtcata-aactatcatgttttttgc 35579000  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    | ||||  |||||| |||||||||||| ||||||||||||||||||||| || ||||||||    
T  35579001 agttttaatcctacatcctattttcaa-ctccagaaacgcagagaaatgacatttttagac 35579060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 264
Target Start/End: Complemental strand, 5334371 - 5334284
Alignment:
Q  177 taattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtcc 264  Q
    ||||||| ||||||||||||||||||||||   ||||| || |||||||||| ||||||| ||  ||| |||| ||||||||| ||||    
T  5334371 taattagacttaattacacttttggtcctcacattttgaccaactcacgaaaatagtcctacctcttttaaatcgaacaaaatcgtcc 5334284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 39137080 - 39136998
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtcc 264  Q
    ||||||||||||||||||| ||||||| ||||| ||  ||||||||| | ||||||||  ||| |||| ||||||||| ||||    
T  39137080 aggcttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcgtcc 39136998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 344
Target Start/End: Original strand, 15712366 - 15712525
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    ||||||||||||||||||||||    ||||| || |||||||||| | |||||  | |||| |||| ||||||||| |||||| || ||| || ||| ||    
T  15712366 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atatttttt 15712464  T
Q  284 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | | |||| |||||| ||||   |||| ||||| ||||||||| | ||||| |||||||||    
T  15712465 gtagttttagtcctatctccctatttccaactctagaaacgcacataaatgacagttttag 15712525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 264
Target Start/End: Complemental strand, 787334 - 787251
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtcc 264  Q
    |||| ||||||||||||||||| ||||| ||||| || |||||||||| | ||||| ||  ||| |||| ||||||||| ||||    
T  787334 taggtttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtcc 787251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 266
Target Start/End: Complemental strand, 26048492 - 26048409
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtcctt 266  Q
    |||||||||||||||||| |||| | |||||| || |||||||||||| ||||| ||  ||| ||||  |||||||| ||||||    
T  26048492 ggcttaattacacttttgttccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcaaacaaaattgtcctt 26048409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 311
Target Start/End: Original strand, 33880617 - 33880748
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||| ||||||| || ||||||||||||| ||||| ||  ||||| ||| | || |||||  ||| |||| ||||||||  |||| | ||||||||| ||    
T  33880617 ttagccttaattgcatttttggtcctcgtattttgaccagctcacaaaaattgttctgcctctttcaaatcgaacaaaaccgtccctaaattatcatatt 33880716  T
Q  280 tgttgcatttttcgtcctacctcctattttca 311  Q
    | ||||| |||| |||||||| | ||||||||    
T  33880717 ttttgcacttttagtcctaccccttattttca 33880748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 259
Target Start/End: Complemental strand, 39388813 - 39388738
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaat 259  Q
    |||||||||||||||||||||| |  ||||| || |||||||||||| ||||| ||  ||| |||| |||||||||    
T  39388813 gcttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcctacctcttttaaatcgaacaaaat 39388738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 786781 - 786943
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||| ||||    ||||| || |||||||||| | ||| | || |||| |||| |||||||||  ||||| || |||   ||||     
T  786781 aggcttaattacacttttgatccttccattttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaattttccttaaactatatgttttt 786880  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| |||| |||||| ||||   |||| ||||||| ||||||| |||| || |||||||||    
T  786881 ttgcagttttagtcctatctccctatttccaactccataaacgcacagaagtgacagttttag 786943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 344
Target Start/End: Complemental strand, 16081846 - 16081685
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||| ||||||||| |  ||||| || ||||||||||||  |||| ||  ||| |||| |||||||||  ||| | || ||| || |||     
T  16081846 aggcttaattacacctttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcatccctaaactat-atgtttt 16081748  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| |||| |||||| ||||   |||| ||||||| ||||||| | ||||| |||||||||    
T  16081747 ttgcagttttagtcctatctccctatttccaactccaaaaacgcacaaaaatgacagttttag 16081685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 346
Target Start/End: Complemental strand, 32427461 - 32427404
Alignment:
Q  288 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||| ||||| |||||||||||||| ||| | ||||||||||||||| |||||||||||    
T  32427461 ttttagtccttcctcctattttcaa-ctctaaaaacgcagagaaatgacagttttagac 32427404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 344
Target Start/End: Original strand, 48247584 - 48247751
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattat---cat 276  Q
    |||||||||||||||||||||||||| |  |||||  | |||||||||||| ||||| ||  ||| ||||  |||||||| |||| | || |||     |    
T  48247584 ttaggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaagtatatattt 48247683  T
Q  277 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    |||| ||||| |||| ||| || ||||   |||| ||||||| ||||||| ||||||| |||||||||    
T  48247684 tttttttgcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagttttag 48247751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 333
Target Start/End: Complemental strand, 7733034 - 7732884
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||    ||||| || |||||||||| |  ||||  | |||| |||| ||||||||| |||||| || ||| || |||     
T  7733034 aggcttaattacacttttggtcctaccattttgaccaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttt 7732936  T
Q  282 ttgcatttttcgtcctacct-cctattttcaaactccagaaacgcagagaaat 333  Q
    ||||| |||| |||||| || ||||||||| ||||||| ||| ||| ||||||    
T  7732935 ttgcaattttagtcctatctccctattttc-aactccataaatgcacagaaat 7732884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 266
Target Start/End: Original strand, 11971333 - 11971417
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtcctt 266  Q
    ||||||||||| ||||||||||||    ||||| ||||||||||||| | |||||  | |||| |||| ||||||||| ||||||    
T  11971333 aggcttaattatacttttggtcctaccattttgacctactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctt 11971417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 158; Significance: 5e-84; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 180 - 369
Target Start/End: Original strand, 12935154 - 12935343
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  12935154 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 12935253  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  12935254 tgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagatatacccctatgct 12935343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 180 - 369
Target Start/End: Complemental strand, 22219901 - 22219712
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  22219901 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 22219802  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||| |||||||||||||    
T  22219801 tgttgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttaggcggttttagacctacccctatgct 22219712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 180 - 369
Target Start/End: Complemental strand, 11445535 - 11445346
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||| ||||||||| ||||||||||||||||||||    
T  11445535 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttt 11445436  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||| | |||||||||||    
T  11445435 tgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacccacccctatgct 11445346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 186 - 346
Target Start/End: Original strand, 10899942 - 10900102
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    |||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900041  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10900042 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 10900102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 182 - 369
Target Start/End: Original strand, 31470314 - 31470501
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| | ||| ||| ||||||||| |||||||||  ||| ||||||||| |||||||    
T  31470314 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttg 31470413  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||    
T  31470414 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcgattttagacctacccctatgct 31470501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 182 - 369
Target Start/End: Complemental strand, 20741650 - 20741460
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcat---tt 278  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |  |||||||||||||||| ||||||||| |||||||||||||||||   ||    
T  20741650 aggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttt 20741551  T
Q  279 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||| |||||||||||||    
T  20741550 tttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccctatgct 20741460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 181 - 369
Target Start/End: Complemental strand, 23075675 - 23075487
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| ||||||||| |||||||||||||||||||||    
T  23075675 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 23075576  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||| |||||||||||||| |||||||| ||| ||||||||||| ||||||||| | |||||||| |||||| ||||||    
T  23075575 gttgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttaggcagttttagacctacccttatgct 23075487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 186 - 369
Target Start/End: Original strand, 18504922 - 18505105
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||| ||||||||| ||| |||||||||||||||||||| |    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||||||||| ||||| | ||||||||| ||||||||| || ||||||| |||||||||||||    
T  18505022 atttttcgtcctacctcctattttcaaactctagaaatgtagagaaatgacagttttaggcgattttagacctacccctatgct 18505105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 179 - 369
Target Start/End: Original strand, 2319668 - 2319857
Alignment:
Q  179 attaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattt 278  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| | ||| ||||||||||||| ||||||||| |||||||||||||||||||    
T  2319668 attaggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 2319767  T
Q  279 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||| || ||||| |  |||||||||||||||||||||  |||||||| |||||||||| |||||||||||||    
T  2319768 ttgttgcatttttcgtcctaccccccatttt-attctccagaaacgcagagaaatgatagttttaggcggttttagacctacccctatgct 2319857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 183 - 369
Target Start/End: Complemental strand, 18257682 - 18257496
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgt 18257583  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    | |||||||||||||||||| ||||||| ||||||| | ||| ||||||||| ||||||||| |||||||||| |||||||||||||    
T  18257582 tacatttttcgtcctacctcatattttccaactccatacacgtagagaaatgacagttttaggcggttttagacctacccctatgct 18257496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 181 - 346
Target Start/End: Original strand, 20741098 - 20741262
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  20741098 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcattttt 20741197  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  20741198 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 20741262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 181 - 346
Target Start/End: Original strand, 18257135 - 18257299
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  18257135 taggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18257234  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||| |||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  18257235 gttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 18257299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 183 - 346
Target Start/End: Complemental strand, 10900475 - 10900313
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  10900475 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 10900376  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  10900375 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 10900313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 11276589 - 11276751
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||| ||| |||| |||||||||| ||||||| |||| |  |||| ||||||||||| |||||||||||||||||||||| |||||||||    
T  11276589 aggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttg 11276688  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    || |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  11276689 tttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 11276751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 15827639 - 15827811
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaat--ggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| | || ||| |||||||||| | |||||| |  |||||||||| |||||||||||    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttg 15827738  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttaga 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||| ||||||||||    
T  15827739 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgaca-ttttaggcggttttaga 15827811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 346
Target Start/End: Original strand, 28472634 - 28472798
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||| |||||||| |||||||||||||| |||||||||||||||    
T  28472634 ttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttt 28472733  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  28472734 tgttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttagac 28472798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 346
Target Start/End: Original strand, 29859823 - 29859987
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||| |||||||| |||||||||||||| |||||||||||||||    
T  29859823 ttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttt 29859922  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  29859923 tgttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttagac 29859987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 183 - 346
Target Start/End: Complemental strand, 11277127 - 11276965
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  11277127 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 11277028  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||||    
T  11277027 tgcatttttcgtcctaccccccatttt-attctccaaaaacgaagagaaatgacagttttagac 11276965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 182 - 346
Target Start/End: Complemental strand, 15828187 - 15828024
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||| | ||||||||||| | ||||||| ||||||||||||||||||||||    
T  15828187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttg 15828088  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||  |||||||||||    
T  15828087 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttagac 15828024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 183 - 369
Target Start/End: Complemental strand, 4811801 - 4811616
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||| ||||||| |||||||||||||||||||||| |||| |  || |||  |||||||| ||||||||| |||||||||||||||||||||||    
T  4811801 ggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgt 4811702  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||| || |||||||||||||||||| ||| ||||||||| |||||||| ||||||   |||||||| |||||||||||||    
T  4811701 tgcatttttcatcatacctcctattttcaaaccccataaacgcaga-aaatggcaattttaggtagttttagacctacccctatgct 4811616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 180 - 346
Target Start/End: Original strand, 11444984 - 11445149
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||| ||||||| |||| |||||||||||||||||||||||||    
T  11444984 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttt 11445083  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||||||  | ||||| |  ||| | |||| |||||||||| |||||||||||    
T  11445084 tgttgcatttttcgtcctaccctccatttt-attctctaaaaacacagagaaatgacagttttagac 11445149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 178 - 346
Target Start/End: Complemental strand, 1149982 - 1149814
Alignment:
Q  178 aattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatt 277  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||| |||| | ||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  1149982 aatttggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatt 1149883  T
Q  278 tttgttgcatttttcgtcctacctcctattttcaaactcc-agaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||||||| || ||||| |  |||| | ||||||||||||||| |||||||||||    
T  1149882 tttgttgcatttttcgtcctaccccccatttt-attctccaaaaaacgcagagaaatgacagttttagac 1149814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 181 - 346
Target Start/End: Complemental strand, 12935704 - 12935540
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||| || ||||| ||||||||| |||||||||||||||||||||    
T  12935704 taggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcattttt 12935605  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||| |||||||||||||||| || ||||| |  ||||| |||| |||||||||| |||||||||||    
T  12935604 gttacatttttcgtcctaccccccatttt-attctccataaacacagagaaatgacagttttagac 12935540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 184 - 345
Target Start/End: Complemental strand, 31470860 - 31470700
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    |||||||||||||||||||||| ||||||| |||||||||||||| | || |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  31470860 gcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 31470761  T
Q  284 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaga 345  Q
    ||||||||||||||||| || ||||| |  ||||| ||||||||||||||| || |||||||    
T  31470760 gcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacaattttaga 31470700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 186 - 346
Target Start/End: Complemental strand, 2322760 - 2322602
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||||| |||| |||||||| ||||||||| ||||||||||||||||||||||||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||| |||  ||| |  ||||| |||| |||||||||| |||||||||||    
T  2322660 atttttcgtcctacc-cctcattttattctcca-aaacacagagaaatgacagttttagac 2322602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 182 - 280
Target Start/End: Original strand, 23073998 - 23074096
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23073998 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcattttt 23074096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 184 - 343
Target Start/End: Complemental strand, 18505463 - 18505305
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    ||||||||| |||||||||||||||||||||| |||||||||||| |  |||||||||||||||| | |||||||  |||||||||||||||||||||||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgtt 18505364  T
Q  284 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagtttta 343  Q
    ||||||||||||||||| || ||||| |  |||||  |||| ||||||||| ||||||||    
T  18505363 gcatttttcgtcctaccccccatttt-attctccaacaacgaagagaaatgacagtttta 18505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 185 - 309
Target Start/End: Original strand, 29033436 - 29033560
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||| |||||||||  |||||||| |||||||||||||||    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttg 29033535  T
Q  285 catttttcgtcctacctcctatttt 309  Q
    ||  |||| ||||||| || |||||    
T  29033536 cacatttcatcctaccccccatttt 29033560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 183 - 346
Target Start/End: Original strand, 4811372 - 4811534
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    ||||||||||||||||||||||  || |||||| |||||||||||| | ||| |||||||||||||||||| |||| |||||||||||||||||||||||    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgt 4811471  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    | ||||||||||| |||| || ||||| |  || || ||||||||| ||||  |||||||||||    
T  4811472 ttcatttttcgtcttaccccccatttt-attcttcaaaaacgcagataaataacagttttagac 4811534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 185 - 296
Target Start/End: Complemental strand, 29035180 - 29035069
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||| ||  ||||||||||||| |||||||||| |||||| | |||||||||||||||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttg 29035081  T
Q  285 catttttcgtcc 296  Q
    ||||||||||||    
T  29035080 catttttcgtcc 29035069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 1149463 - 1149553
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaatt 271  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||    
T  1149463 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 177 - 309
Target Start/End: Complemental strand, 3835277 - 3835145
Alignment:
Q  177 taattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcat 276  Q
    |||| ||| |||||||||||||||||||  |||||||| ||||||||||||| | ||||||||  ||||||| |||||||||| |||||| |||||||||    
T  3835277 taataaggtttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcat 3835178  T
Q  277 ttttgttgcatttttcgtcctacctcctatttt 309  Q
    |||||| ||||||||||||||||| || |||||    
T  3835177 ttttgtggcatttttcgtcctaccccccatttt 3835145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 18296142 - 18296262
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||| | |||| |||||||||||||| | ||||||| |||||  |  ||||||||||||| |||||||||  |||||||| ||||||||||    
T  18296142 ttaggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatcatttt 18296241  T
Q  280 tgttgcatttttcgtcctacc 300  Q
    |||||||||||||||||||||    
T  18296242 tgttgcatttttcgtcctacc 18296262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 5121018 - 5120856
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||||||||||||||||||||||||| |  ||||| || ||||||||||||| |||| ||  ||| |||| ||||||||| |||| | || ||| || ||    
T  5121018 ttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattattcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgtt 5120920  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagtttta 343  Q
    | ||||| |||| |||||| ||||   |||| ||||||| ||||||| ||||||| ||||||||    
T  5120919 ttttgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagtttta 5120856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 182 - 344
Target Start/End: Complemental strand, 35163734 - 35163572
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatca-ttttt 280  Q
    ||||||||||||||||||||||| ||  ||||| ||  ||||||||| | || |||||  ||| ||||  |||||||| |||| | || |||   |||||    
T  35163734 aggcttaattacacttttggtccccgcattttgaccagctcacgaaaatggttctgcctctttcaaatcaaacaaaatcgtccctaaactatatgttttt 35163635  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
     ||||| |||| |||||||||||||||||| ||||||| |||| |||||||||| |||||||||    
T  35163634 tttgcagttttagtcctacctcctattttc-aactccaaaaacacagagaaatgacagttttag 35163572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 344
Target Start/End: Complemental strand, 31574272 - 31574111
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||||||||||||| |  ||||| || |||||||||||||||| | ||  ||| |||| ||||||||| |||| | || ||| || |||     
T  31574272 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaactat-atgtttt 31574174  T
Q  282 ttgcatttttcgtcctacct-cctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| |||| ||| || || ||||||||| ||||||||||||||| | ||||| || ||||||    
T  31574173 ttgcagttttagtcatatctccctattttc-aactccagaaacgcacataaatgacaattttag 31574111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 344
Target Start/End: Complemental strand, 31073688 - 31073528
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    ||||||||||||||||||||||| |  ||||| ||  ||||||||||| ||| | ||  ||| |||| ||||||||| |||| | || |||   ||||||    
T  31073688 ggcttaattacacttttggtccttgcattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaattgtccctaaactatatgttttgt 31073589  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
     ||| |||| |||||| ||||   |||| ||||||||||||||| ||||||| |||||||||    
T  31073588 -gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 31073528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 313 - 369
Target Start/End: Original strand, 1149558 - 1149614
Alignment:
Q  313 actccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||| ||||||||| |||||||||| || ||||||| |||||||||||||    
T  1149558 actccagaaacacagagaaatagcagttttaggcgattttagacctacccctatgct 1149614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 22534270 - 22534214
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcc 239  Q
    |||||||||||||||||||||||||| ||||| || |||||||||| | ||||||||    
T  22534270 ggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 362
Target Start/End: Original strand, 32836114 - 32836179
Alignment:
Q  296 ctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 362  Q
    ||||||||||||||||| |||| ||||| |||||||||| |||||||||||  ||||||| ||||||    
T  32836114 ctacctcctattttcaa-ctcctgaaacacagagaaatgacagttttagacaattttagacctaccc 32836179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 344
Target Start/End: Complemental strand, 25472559 - 25472398
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||| ||||    ||||| || |||||||||| | ||| |  | |||| |||| ||||||||| |||||| || |||   |||| |    
T  25472559 ggcttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 25472460  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    |||| |||| |||||| ||||   |||| | ||||||||||||| ||||||| |||||||||    
T  25472459 tgcagttttagtcctatctccctatttccagctccagaaacgcacagaaatgacagttttag 25472398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 346
Target Start/End: Complemental strand, 32836542 - 32836381
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    ||||||||||||||||| ||||| |  ||||| ||  ||||||||| | ||| ||||  ||| |||| ||||||||  || ||| || | | || ||| |    
T  32836542 ggcttaattacacttttagtccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcttaaactgt-atgttttt 32836444  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||| |||| ||||||||| |||||||||| || |||||||| ||||||||  |||||||||||    
T  32836443 tgcagttttagtcctaccttctattttcaa-cttcagaaacgaagagaaataacagttttagac 32836381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 5114467 - 5114628
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||| ||||| ||||    |||||  | |||||||||| | |||||  | |||| |||| ||||||||| |||||| || ||| || |||     
T  5114467 aggcttaattacatttttgatcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttt 5114565  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| |||| |||||| ||||   |||| |||||||||||| || ||||||| |||||||||    
T  5114566 ttgcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttag 5114628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 344
Target Start/End: Original strand, 31573817 - 31573885
Alignment:
Q  276 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||| |||||||||    
T  31573817 ttttttttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttag 31573885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 157; Significance: 2e-83; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 181 - 369
Target Start/End: Complemental strand, 19359683 - 19359495
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  19359683 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19359584  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||    
T  19359583 gttggatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttaggcggttttagacctacccctatgct 19359495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 172 - 369
Target Start/End: Complemental strand, 16019142 - 16018946
Alignment:
Q  172 gtttataattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaatt 271  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||    
T  16019142 gtttataat-aggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaatt 16019044  T
Q  272 atcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16019043 atcatttttgttgtatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagacggttttagatctacccctatgct 16018946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 181 - 369
Target Start/End: Original strand, 5818927 - 5819115
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  5818927 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 5819026  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  5819027 gttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 5819115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 180 - 369
Target Start/End: Complemental strand, 8647986 - 8647797
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||| ||||||||| ||||||||||||||||||||    
T  8647986 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 8647887  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  8647886 tgttgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 8647797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 182 - 369
Target Start/End: Complemental strand, 25000635 - 25000448
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||| ||| ||  ||||||||| |||||||||||||| |||||||||||||||||    
T  25000635 aggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttg 25000536  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25000535 ttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagacggttttagatctacccctatgct 25000448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 185 - 369
Target Start/End: Original strand, 2864756 - 2864940
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||  || ||||||||||||| | ||||||| |||||||||||||||||||||||||    
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 2864855  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  2864856 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagaactacccctatgct 2864940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 182 - 369
Target Start/End: Complemental strand, 8461477 - 8461290
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |  |||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  8461477 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttg 8461378  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
     ||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||| |||||||||| |||||||||||||    
T  8461377 ctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccctatgct 8461290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 185 - 367
Target Start/End: Original strand, 14215243 - 14215425
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    |||||||||||||||||||||||||||||||| ||||||||||| | ||  | ||||||||||| ||||||||| ||||||||| |||||||||||||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttg 14215342  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatg 367  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  14215343 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 14215425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 180 - 369
Target Start/End: Original strand, 24331556 - 24331747
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatca--tt 277  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||||   ||    
T  24331556 ttaggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattt 24331655  T
Q  278 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  24331656 tttgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 24331747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 182 - 369
Target Start/End: Original strand, 29454739 - 29454926
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||| ||||||||||| | |||||||||||||||||||||||| ||| ||||||||||||| ||||||||| ||||||| ||||||||||||||    
T  29454739 aggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcatttttg 29454838  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||| |||||| ||||||    
T  29454839 ctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttaggcggttttagacctacccatatgct 29454926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 181 - 369
Target Start/End: Original strand, 18182968 - 18183156
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||| ||||||||| |||||||||||||||||||||    
T  18182968 taggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18183067  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||||||| | || ||||||||||||||||||| ||||||||| | |||||||  |||||||||||||    
T  18183068 gttgcatttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttaggcagttttaggcctacccctatgct 18183156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 164191 - 164376
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||| || | ||||||| |||| ||||||||||||||| ||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatcatttt-gt 164289  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||  |||||||||| |||||||||||||    
T  164290 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttatgcggttttagacctacccctatgct 164376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 183 - 346
Target Start/End: Original strand, 8647438 - 8647600
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgt 8647537  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  8647538 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 8647600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 185 - 369
Target Start/End: Original strand, 15371873 - 15372060
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    |||||||||||||||| ||||||| |||||| ||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacgaa-ttggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 15371971  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagtt----ttagacggttttagatctacccctatgct 369  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||||||  ||||    |||| |||||||||| ||||| |||||||    
T  15371972 catttttcgtcccacctcctatttgcaaactctagaaacgcagagaaatgatagttttaattaggcggttttagacctacctctatgct 15372060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 183 - 362
Target Start/End: Complemental strand, 15709513 - 15709335
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||| ||||| |||||||| |||| ||||||||| ||||||| | ||||||||| |||    
T  15709513 ggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttctgt 15709415  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 362  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||| |||||||||| ||||||    
T  15709414 tgcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttaggcggttttagacctaccc 15709335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 183 - 346
Target Start/End: Original strand, 19359136 - 19359298
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19359136 ggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 19359235  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||||||||||| ||||| |||||    
T  19359236 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttctagac 19359298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 180 - 346
Target Start/End: Complemental strand, 18183517 - 18183352
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  18183517 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 18183418  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||||| |||  ||| |  ||||| ||||||||||||||  |||||||||||    
T  18183417 tgttgcatttttcgtcctacc-cctcattttattctccaaaaacgcagagaaataacagttttagac 18183352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 181 - 346
Target Start/End: Complemental strand, 2865302 - 2865138
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  2865302 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 2865203  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||| |||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||||    
T  2865202 gtttcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 2865138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 182 - 346
Target Start/End: Complemental strand, 29455288 - 29455125
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29455288 aggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 29455189  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||||    
T  29455188 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 29455125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 183 - 345
Target Start/End: Complemental strand, 5819474 - 5819313
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 5819375  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaga 345  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||| ||||||| ||||||||||    
T  5819374 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgacagttttaga 5819313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 181 - 346
Target Start/End: Complemental strand, 24362383 - 24362219
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||| |||| |||| |||||||||| ||||||||||    
T  24362383 taggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcattttt 24362284  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  24362283 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 24362219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 180 - 346
Target Start/End: Complemental strand, 15372421 - 15372256
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||| |||||||||    
T  15372421 ttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttt 15372322  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||| || |||| ||| ||||| |   |||| ||||||||||||||| |||||||||||    
T  15372321 tgttgcattttttgttctacatcccatttt-attttccaaaaacgcagagaaatgacagttttagac 15372256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 180 - 346
Target Start/End: Original strand, 15708968 - 15709132
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| | ||  ||||||||||||| ||||||||| ||||||||||||||||||||    
T  15708968 ttaggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 15709067  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||| |||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  15709068 tgttgcatatttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttagac 15709132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 189 - 369
Target Start/End: Original strand, 24361843 - 24362022
Alignment:
Q  189 attacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcatt 288  Q
    |||||||||||||||| | ||||||||||||| ||||||| |  || ||||||| ||||| |||||||||||||||||||| ||||||||||||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  289 tttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||| || ||||| |  ||||| |||||||||||||||  |||||||| |||||||||| |||||||||||||    
T  24361943 tttcgtcctaccccccatttt-attctccacaaacgcagagaaatgatagttttaggcggttttagacctacccctatgct 24362022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 181 - 346
Target Start/End: Original strand, 8460928 - 8461092
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  8460928 taggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 8461027  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||| |||| || ||||| |  ||||| ||| ||||||||||| |||||||||||    
T  8461028 gttgcatttttcgtcataccccccatttt-attctccaaaaatgcagagaaatgacagttttagac 8461092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 181 - 346
Target Start/End: Complemental strand, 14464067 - 14463904
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| || |  || |||||||||||||||||||| | |||||||||||||||||||    
T  14464067 taggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcattttt 14463968  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
     ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  14463967 attgcatttttcgtcctacc-ccaatttt-attctccaaaaacgcagagaaatgacagttttagac 14463904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 189 - 369
Target Start/End: Original strand, 24325218 - 24325397
Alignment:
Q  189 attacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcatt 288  Q
    |||||||||||||||| | ||||||||||||| ||||||| |  || ||||||| ||||| |||||||||||||||||||| |||||||||||| |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  289 tttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||| || ||||| |  ||||| |||||||||||||||  |||||||| |||||||||| |||||||||||||    
T  24325318 tttcgtcctaccccccatttt-attctccacaaacgcagagaaatgatagttttagccggttttagacctacccctatgct 24325397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 180 - 346
Target Start/End: Complemental strand, 14215791 - 14215626
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||| |  |||||||||||||||| ||||||||| |||||||||| |||||||||    
T  14215791 ttaggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttt 14215692  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||| || | || ||||| |  ||||| ||||| ||||||||| |||||||||||    
T  14215691 tgttgcatttttcgtcttaacccccatttt-attctccaaaaacgtagagaaatgacagttttagac 14215626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 5501936 - 5501830
Alignment:
Q  18 aatatccaataatttcatacatcattccagttttgaaaggatattttccaactcaaataatatatatttatcacaaatgtaaatgtaaggcacacaactt 117  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||      ||||||||||||||||    
T  5501936 aatatccaataatttcatacaacattccagttttgaaaggatatttgccaactcaaataatatatatttatcacaaat------gtaaggcacacaactt 5501843  T
Q  118 ctatccaaataat 130  Q
    |||||||||||||    
T  5501842 ctatccaaataat 5501830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 180 - 346
Target Start/End: Complemental strand, 164739 - 164574
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||| | ||||| ||||| |||||||||| |||||| ||| | ||| ||||||||||||| ||||||||| ||||||||||||||||||||    
T  164739 ttaggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttt 164640  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||| |||||||| || ||||| |  ||||| ||| | ||||||||| |||||||||||    
T  164639 tgttgcattttttgtcctaccccccatttt-attctccaaaaatgtagagaaatgacagttttagac 164574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 16018588 - 16018705
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||  || ||||||||||||||||||||||| |||||||||||||| ||||||     
T  16018588 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-attttta 16018686  T
Q  282 ttgcatttttcgtcctacc 300  Q
    ||||||||| |||||||||    
T  16018687 ttgcattttccgtcctacc 16018705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 300
Target Start/End: Complemental strand, 4222266 - 4222150
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    |||||||||||||||||||||||||||||||| || ||||||||| | ||| ||||||||||||| |||||||||| ||| |||| ||||||||||| ||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttatt 4222167  T
Q  284 gcatttttcgtcctacc 300  Q
    |||||||||||||||||    
T  4222166 gcatttttcgtcctacc 4222150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 7349562 - 7349436
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||| | |||||||   ||||||| |||||||||||||    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgt 7349463  T
Q  283 tgcatttttcgtcctacctcctatttt 309  Q
    |||| ||||| ||||||| || |||||    
T  7349462 tgcacttttcatcctaccccccatttt 7349436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 183 - 300
Target Start/End: Original strand, 4623148 - 4623265
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||| ||||||||  ||||||| |||||||||| |||||||||||||||||||| |    
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttat 4623247  T
Q  283 tgcatttttcgtcctacc 300  Q
     ||||||| |||||||||    
T  4623248 ggcattttccgtcctacc 4623265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 205 - 345
Target Start/End: Original strand, 25000112 - 25000251
Alignment:
Q  205 tcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcct 304  Q
    ||||||||||||||||||||||| || ||| |||||| |||||| |||| |||||||||||| ||||||||||||| |||||||||| |||||||| ||     
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacccccc 25000211  T
Q  305 attttcaaactccagaaacgcagagaaatggcagttttaga 345  Q
    ||||| |  ||||| ||||| ||||||||| ||||||||||    
T  25000212 atttt-attctccaaaaacgtagagaaatgacagttttaga 25000251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 7348559 - 7348685
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||| ||||||||||| |||||| | |||||||||||||| ||| ||||||||||||| |||||||||   ||||||  |||||||||||||    
T  7348559 ggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgt 7348658  T
Q  283 tgcatttttcgtcctacctcctatttt 309  Q
    |||| ||||||||||||| || |||||    
T  7348659 tgcacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 183 - 300
Target Start/End: Original strand, 4219663 - 4219780
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||| |||||||||||||| ||| | || ||| | ||| |||| |||||||| |||||||| | |||||| | |||||||||||||    
T  4219663 ggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgt 4219762  T
Q  283 tgcatttttcgtcctacc 300  Q
    ||||||||||||||||||    
T  4219763 tgcatttttcgtcctacc 4219780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 311
Target Start/End: Original strand, 6018315 - 6018441
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    ||||||||||| ||||||| |||||||||||  |||||||||||| | ||| || |||||||||| ||||||||||  | ||||||||||||||||||||    
T  6018315 gcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgtt 6018413  T
Q  284 gcatttttcgtcctacctcctattttca 311  Q
    ||| |||| ||||||||  |||||||||    
T  6018414 gcagttttagtcctaccctctattttca 6018441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 184 - 366
Target Start/End: Original strand, 10721787 - 10721967
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    ||||||||||| |||||||||||   ||||| ||  ||||||||| | ||| || |  ||| |||| ||||||||| |||||  || |||||| ||| ||    
T  10721787 gcttaattacatttttggtcctcacattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaatcgtccta-aactatcatgtttttt 10721885  T
Q  284 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctat 366  Q
    ||| |||| |||||||||||||||||||| ||||||||||| ||||||||| ||||||||| | |||||||| ||||||||||    
T  10721886 gcagttttagtcctacctcctattttcaa-ctccagaaacgtagagaaatgacagttttaggcagttttagacctacccctat 10721967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 265 - 344
Target Start/End: Original strand, 14462686 - 14462769
Alignment:
Q  265 ttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactc----cagaaacgcagagaaatggcagttttag 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||| ||||||||| |||||||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagacagaaacgtagagaaatgacagttttag 14462769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 185 - 346
Target Start/End: Complemental strand, 24332107 - 24331943
Alignment:
Q  185 cttaattacactttt-ggtcctcgtgttttggcctactcacgaaattagtcctgccctttt-aaaatagaacaaaatggtccttcaattatcat-ttttg 281  Q
    ||||||||||||||| |||| || ||||||||| ||||||||||| |  ||||||| |||| |||| ||||||||| |||||| |||||||||| |||||    
T  24332107 cttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttg 24332008  T
Q  282 ttgca-tttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||| |||||||||||||| || ||| | |  ||||| ||||||||||||||| |||||||||||    
T  24332007 ttgcattttttcgtcctaccccccattct-attctccaaaaacgcagagaaatgacagttttagac 24331943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 182 - 355
Target Start/End: Complemental strand, 41834606 - 41834434
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcat-tttt 280  Q
    ||||||||||||||||||||||||||  ||||| ||  ||||||||| | ||||||||  ||| | || ||||||||  |||| | || |||||| ||||    
T  41834606 aggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtcc-taaactatcatgtttt 41834508  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttaga 355  Q
     ||||| |||| |||||||||||||||||| |||||  |||||||||||||||| |||||||||||  |||||||    
T  41834507 tttgcagttttagtcctacctcctattttc-aactcttgaaacgcagagaaatgacagttttagacaattttaga 41834434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 309
Target Start/End: Complemental strand, 6019309 - 6019189
Alignment:
Q  189 attacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcat- 287  Q
    |||||| |||||||| || ||||||||| ||||||||||| |  || ||| ||||||||| |||||||||  ||| || ||||||||||||||||||||     
T  6019309 attacatttttggtcatcatgttttggc-tactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcatt 6019211  T
Q  288 ttttcgtcctacctcctatttt 309  Q
    |||||||||||||||| |||||    
T  6019210 ttttcgtcctacctcccatttt 6019189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 344
Target Start/End: Complemental strand, 28290192 - 28290030
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||    ||||| || |||||||||| | |||||  | |||| |||| ||||||||| |||||| || ||| || |||    
T  28290192 taggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaactat-atgttt 28290094  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
     ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||| |||||||||    
T  28290093 tttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 28290030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 28289683 - 28289844
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||| |||| |  ||||| || |||||||||||||||| | ||  ||| |||| ||||||||| |||| | |||||| || |||     
T  28289683 aggcttaattacacttttgatccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaattat-atgtttt 28289781  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    || || |||| |||||| ||||   |||| ||||||||||||||| ||||||| |||||||||    
T  28289782 ttccagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 28289844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 196 - 309
Target Start/End: Complemental strand, 4624757 - 4624644
Alignment:
Q  196 ttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcatttttcgtc 295  Q
    |||| |||||||||||||  ||||||||||||||| ||| || |  ||||||| | |||||||   || |||||||||||||| ||||||||||||||||    
T  4624757 ttttcgtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtc 4624658  T
Q  296 ctacctcctatttt 309  Q
    ||||| || |||||    
T  4624657 ctaccccccatttt 4624644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 362
Target Start/End: Original strand, 27307060 - 27307238
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||| ||||  ||||| || ||| | |||| | ||| ||    ||| |||| |||||||||  ||||  || |||||| |||     
T  27307060 aggcttaattacacttttggttctcgcattttgaccaacttatgaaaatggtcatgtttctttcaaattgaacaaaatcatccta-aactatcatgtttt 27307158  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 362  Q
    ||||| |||| ||| |||||||||||||||| ||||||||||||| ||||||| ||||||||| | |||||||| ||||||    
T  27307159 ttgcagttttagtcttacctcctattttcaa-ctccagaaacgcatagaaatgacagttttaggcagttttagacctaccc 27307238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 344
Target Start/End: Complemental strand, 15029857 - 15029695
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    ||||||||||||||||||||||||||   ||||| || |||||||||| | ||| | || |||| |||| ||||||||| |||||| || ||| || |||    
T  15029857 taggcttaattacacttttggtcctcccattttgaccaactcacgaaaatggtcttaccttttttaaatcgaacaaaatcgtccttaaactat-atgttt 15029759  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
     ||||| |||| || | | ||||   |||||||||||||||||||| | ||||| |||||||||    
T  15029758 tttgcagttttagttcgatctccctatttcaaactccagaaacgcacataaatgacagttttag 15029695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 369
Target Start/End: Original strand, 28494839 - 28495029
Alignment:
Q  178 aattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatt 277  Q
    ||||| ||||||||||||||||||||||    ||||| ||   ||| |||| | || |||||  ||| |||| ||||||||  |||||  || ||||||     
T  28494839 aattaagcttaattacacttttggtccttacattttgaccagttcaggaaaatggttctgcctctttcaaatcgaacaaaactgtccta-aactatcatg 28494937  T
Q  278 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacc-cctatgct 369  Q
    ||| ||||| |||| |||||||||||||||||| |||||||||||||||||||| || || ||||||   |||||||| ||||| ||||||||    
T  28494938 ttttttgcagttttagtcctacctcctattttc-aactccagaaacgcagagaagtgacaattttaggtagttttagacctaccacctatgct 28495029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 346
Target Start/End: Original strand, 32305881 - 32305979
Alignment:
Q  246 aaatagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaga 345  Q
    |||| ||||||||| |||| | || |||||| ||| ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||| ||||||||||    
T  32305881 aaatcgaacaaaatcgtccctaaactatcatgttt-ttgcagttttagtcctacctcttattttcaa-ctccagaaacacagagaaatgacagttttaga 32305978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 185 - 344
Target Start/End: Complemental strand, 16753114 - 16752955
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcat--ttttgt 282  Q
    |||||||||| |||||||| |||  ||||| || |||||||||| | || |||||  ||| |||| |||| |||   ||||  |||||||||  |||| |    
T  16753114 cttaattacatttttggtcatcgcattttgaccaactcacgaaaatggttctgcctctttcaaatcgaacgaaaccatccta-aattatcatgttttttt 16753016  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    |||| |||| | |||| ||||||||||||| ||||||||||||||| |||||||||||||||    
T  16753015 tgcagttttagacctaactcctattttcaa-ctccagaaacgcagaaaaatggcagttttag 16752955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 344
Target Start/End: Original strand, 19291356 - 19291517
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||  | |||||  | |||||| ||| | |||||  | |||| |||| ||||||||| |||||| || |||   |||| |    
T  19291356 ggcttaattacacttttggtcctactattttgaacaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 19291455  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    |||| |||| ||| || |||||  |||| ||||||| ||||||| ||||||| |||||||||    
T  19291456 tgcagttttagtcttatctccttatttccaactccataaacgcacagaaatgacagttttag 19291517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 346
Target Start/End: Original strand, 16752573 - 16752743
Alignment:
Q  174 ttataattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattat 273  Q
    ||||| |||||||||||||||||||||||||  |  ||||| ||  ||||||||| |  || |||   ||| |||| ||||||||| |||| | || |||    
T  16752573 ttatatttaggcttaattacacttttggtccctgcattttgaccagctcacgaaaatgatcatgcttctttcaaatcgaacaaaatcgtccataaactat 16752672  T
Q  274 catttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
     || ||| ||||| |||| ||| |||||||||||||| ||||||| ||||||| |||||||  ||||||||||    
T  16752673 -atgttttttgcagtttttgtcatacctcctattttc-aactccataaacgcaaagaaatgatagttttagac 16752743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 344
Target Start/End: Original strand, 22651347 - 22651505
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    |||||||||| ||||||| ||||| ||||| ||  |||||| || | ||| ||||  ||| ||||  |||||||   ||||| || |||||| ||| |||    
T  22651347 cttaattacatttttggttctcgtattttgaccagctcacggaaatggtcatgcctcttttaaatcaaacaaaaccatccttaaactatcatgttt-ttg 22651445  T
Q  285 catttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    || |||| ||||||||||| ||||||| ||||||||||||||| | |||||||||||||||    
T  22651446 cagttttagtcctacctccttattttc-aactccagaaacgcacaaaaatggcagttttag 22651505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 282 - 346
Target Start/End: Complemental strand, 28495288 - 28495225
Alignment:
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||| |||| |||||||||||||||||||| |||||||| ||||||||||||  ||||||||||    
T  28495288 ttgcagttttagtcctacctcctattttcaa-ctccagaaccgcagagaaatgatagttttagac 28495225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 343
Target Start/End: Complemental strand, 8419165 - 8419008
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    ||||||||||||||||||||||    ||||| || |||||||||  | |||||  | |||| |||| ||||||||| |||||| || ||| |||||| ||    
T  8419165 gcttaattacacttttggtcctaccattttgaccaactcacgaatatggtcctatcttttttaaattgaacaaaatcgtccttaaactat-attttt-tt 8419068  T
Q  284 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagtttta 343  Q
    ||| |||| |||||| ||||   |||| ||||||||||||||| ||||||| || |||||    
T  8419067 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaatttta 8419008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 264
Target Start/End: Original strand, 4966819 - 4966897
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtcc 264  Q
    ||||||||||||||||||||||  ||||| || |||||||||| |||| |||||  ||| |||| ||||||||| ||||    
T  4966819 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatagtactgcctcttttaaatcgaacaaaatcgtcc 4966897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 345
Target Start/End: Complemental strand, 27307499 - 27307443
Alignment:
Q  288 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaga 345  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||||| || |||||||    
T  27307499 ttttagtcctacctcctattttcaa-ctccagaaatgcagagaaatgacatttttaga 27307443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 15115643 - 15115555
Alignment:
Q  178 aattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtcctt 266  Q
    ||||||||||||||||||||||| |||||   ||||| || |||||||||| | ||||| ||  ||| |||| ||||||||| ||||||    
T  15115643 aattaggcttaattacacttttgatcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtcctt 15115555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 344
Target Start/End: Complemental strand, 21371245 - 21371082
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||| |||| |  ||||| || |||||  ||||| ||||| ||  ||| ||||  |||||||| |||| | || ||| || ||    
T  21371245 ttaggcttaattacacttttgatccttgcattttgaccaactcataaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaactat-atgtt 21371147  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | ||||| |||| |||||| ||||   |||| ||||||||||||||| | ||||| |||||||||    
T  21371146 ttttgcaattttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttag 21371082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 300
Target Start/End: Complemental strand, 13814190 - 13814155
Alignment:
Q  265 ttcaattatcatttttgttgcatttttcgtcctacc 300  Q
    |||||||||||||||||||||| |||||||||||||    
T  13814190 ttcaattatcatttttgttgcacttttcgtcctacc 13814155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 344
Target Start/End: Complemental strand, 18150272 - 18150109
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    ||||||||||||||||| || |||| || ||||| |  |||||||||||| ||||| ||  ||| |||| |||||||||  ||| | || |||   ||||    
T  18150272 taggcttaattacacttgtgatccttgtattttgacaaactcacgaaattggtcctacctcttttaaatcgaacaaaatcatccctaaactatatgtttt 18150173  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
     ||||| |||| |||||| ||||   |||| ||||||||||||||| | ||||| | |||||||    
T  18150172 tttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgaccgttttag 18150109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 311
Target Start/End: Complemental strand, 20266464 - 20266333
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||| |||||| |||||||||||||||| ||||| ||  || |||||| | ||| || |  ||| |||| ||||||||| |||| | || ||||||  |    
T  20266464 ttaggtttaattgcacttttggtcctcgtattttgaccagcttacgaaaatggtcatgtctctttcaaatcgaacaaaatcgtccctaaactatcatggt 20266365  T
Q  280 tgttgcatttttcgtcctacctcctattttca 311  Q
    ||||| | |||| |||||||| ||||||||||    
T  20266364 tgttgtagttttagtcctaccccctattttca 20266333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 264
Target Start/End: Complemental strand, 22651859 - 22651776
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtcc 264  Q
    ||||||||||||||||||| |||||||  ||||| ||  ||||||||| | || ||||| |||| |||| ||||||||| ||||    
T  22651859 taggcttaattacactttttgtcctcgcattttgaccagctcacgaaaatggttctgcctttttcaaatcgaacaaaatcgtcc 22651776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 5501772 - 5501739
Alignment:
Q  149 catattgacttgagtgtctgagtgtttataatta 182  Q
    ||||||||||||||||| ||||||||||||||||    
T  5501772 catattgacttgagtgtatgagtgtttataatta 5501739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 324
Target Start/End: Original strand, 38900648 - 38900784
Alignment:
Q  187 taattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgca 286  Q
    |||||||||||||||||||||  ||||| || |||||||||| |  |||| ||  ||| |||| ||||||||| |||| | |||||| || ||| |||||    
T  38900648 taattacacttttggtcctcgcattttgaccaactcacgaaaatgatcctacctcttttaaatcgaacaaaatcgtccctaaattat-atgttttttgca 38900746  T
Q  287 tttttcgtcctacctcctattttcaaactccagaaacg 324  Q
     |||| |||||| ||||   |||| ||||||| |||||    
T  38900747 gttttagtcctatctccctatttccaactccataaacg 38900784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 4967326 - 4967294
Alignment:
Q  174 ttataattaggcttaattacacttttggtcctc 206  Q
    ||||| |||||||||||||||||||||||||||    
T  4967326 ttatatttaggcttaattacacttttggtcctc 4967294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 155; Significance: 3e-82; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 175 - 369
Target Start/End: Complemental strand, 43058885 - 43058692
Alignment:
Q  175 tataattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatc 274  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| ||||||||| |||||||||||||||||||||||||    
T  43058885 tatatttaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatc 43058786  T
Q  275 atttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  43058785 atttt-gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 43058692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 184 - 369
Target Start/End: Complemental strand, 239896 - 239711
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtt 239797  T
Q  284 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| | |||||||    
T  239796 gcgtttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctaactctatgct 239711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 181 - 369
Target Start/End: Complemental strand, 22374872 - 22374684
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||||    
T  22374872 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374773  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| |||||||||| || ||||||||||    
T  22374772 gttgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttaggcggttttagaccttcccctatgct 22374684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 182 - 369
Target Start/End: Original strand, 18450829 - 18451016
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||| ||||||||| |||||||||||||||||||||     
T  18450829 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcatttttt 18450928  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  18450929 ttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 18451016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 182 - 369
Target Start/End: Complemental strand, 28617160 - 28616973
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | || ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  28617160 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttg 28617061  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||| |||||||||||||    
T  28617060 ttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttaggcgattttagacctacccctatgct 28616973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 186 - 367
Target Start/End: Complemental strand, 40027682 - 40027501
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||| |||||||||||||||||||||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 40027583  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatg 367  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||| |||||| ||||    
T  40027582 atttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttaggcggttttagacctacccatatg 40027501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 185 - 369
Target Start/End: Original strand, 40815347 - 40815531
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| | ||||||| ||| |||||||||||||||||||||    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttg 40815446  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  40815447 catttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 40815531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 181 - 369
Target Start/End: Complemental strand, 1978656 - 1978468
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||||||    
T  1978656 taggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcattttt 1978557  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||  |||||||||| ||||| |||||||    
T  1978556 gttgcattttttgtcctacctcctattttcaaactctagaaacacaaagaaatggcagttttatgcggttttagacctacctctatgct 1978468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 180 - 369
Target Start/End: Complemental strand, 7446894 - 7446705
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||| ||||| ||||||||||||| | ||||||||||| | ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  7446894 ttaggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 7446795  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||| |||| | ||||||    
T  7446794 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttagacctactcatatgct 7446705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 181 - 369
Target Start/End: Complemental strand, 11091067 - 11090879
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| ||||||||| |||||||||||||||||| ||    
T  11091067 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattatt 11090968  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| || |||||| |||||||||| |||||| ||||||    
T  11090967 gttgtatttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttaggcggttttagacctacccatatgct 11090879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 180 - 346
Target Start/End: Complemental strand, 26538627 - 26538461
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  26538627 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttt 26538528  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||||| || |||||||||| ||||||||||||||||||| |||||||||||    
T  26538527 tgttgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttagac 26538461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 183 - 369
Target Start/End: Complemental strand, 3026006 - 3025822
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||| || |||||||||||||| | ||||||| |||||||||||||| ||||||||    
T  3026006 ggcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgt 3025909  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||| |||||| |||||| ||||||    
T  3025908 tgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaagcgggtttagacctacccatatgct 3025822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 186 - 362
Target Start/End: Original strand, 8425358 - 8425533
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||| | || |||||||| ||||||||| |||| |||||||||||||| ||||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggtc-ttcaattatcatttgtgttgc 8425456  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 362  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  |||||||||| ||||||    
T  8425457 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaagcggttttagacctaccc 8425533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 181 - 346
Target Start/End: Original strand, 11090519 - 11090683
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  11090519 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 11090618  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  11090619 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 11090683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 180 - 369
Target Start/End: Complemental strand, 14432689 - 14432500
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||| |||||||||| |||||||||||||||||||||||||||| |||| | ||| |||| |||||||| |||| |||||||| |||||||||| |||||    
T  14432689 ttagccttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttt 14432590  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||  |||||| |||||| ||||||    
T  14432589 tgttgcatttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcgaatttagacctacccttatgct 14432500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 179 - 346
Target Start/End: Original strand, 239349 - 239514
Alignment:
Q  179 attaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattt 278  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||| |||||||| ||||||||| |||||||||||||||||||    
T  239349 attaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcattt 239447  T
Q  279 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  239448 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 239514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 346
Target Start/End: Complemental strand, 18451379 - 18451214
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| |||||||||| ||||||||| |||||||||    
T  18451379 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttt 18451280  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||| ||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  18451279 tgttgcatttttcttcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 18451214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 181 - 346
Target Start/End: Original strand, 22374318 - 22374482
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| ||||||||| |||||||||||||||||||||    
T  22374318 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374417  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||||| |||||||  ||||||||||    
T  22374418 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgatagttttagac 22374482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 180 - 346
Target Start/End: Complemental strand, 40815893 - 40815728
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||| ||||||||| || |||||||||||||||||    
T  40815893 ttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatttt 40815794  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  40815793 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 40815728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 186 - 346
Target Start/End: Complemental strand, 8425902 - 8425743
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||||||||||| || ||||||||| |||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||| |||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  8425802 atttttcgtcttacccccaatttt-attctccaaaaacgcagagaaatgacagttttagac 8425743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 182 - 346
Target Start/End: Original strand, 40027139 - 40027302
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||| ||||||||| ||||||||||||||||||||||    
T  40027139 aggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 40027238  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||| ||||||||  | ||||| |  ||||| ||||||||||||||| |||||||||||    
T  40027239 ttgcattttttgtcctaccctccatttt-attctccaaaaacgcagagaaatgacagttttagac 40027302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 183 - 346
Target Start/End: Original strand, 28616613 - 28616776
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  28616613 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 28616712  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||| ||||||||||||| || |||||   |  | | |||||||||||||| ||||||||||||    
T  28616713 tgcaattttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttagac 28616776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 181 - 346
Target Start/End: Original strand, 1978106 - 1978270
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  1978106 taggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 1978205  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||| |||||  | || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  1978206 gttgcattttttgtcctgtcccccatttt-attctccaaaaacgcagagaaatgacagttttagac 1978270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 186 - 346
Target Start/End: Original strand, 14432145 - 14432304
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    |||||||||||||||||||||||||||||||||||||| |||| | ||| ||||||||||||||| ||||||| |||||||||| |||||||||||||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||| |||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  14432245 atttttggtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 14432304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 182 - 346
Target Start/End: Original strand, 26538096 - 26538259
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| | || |||||||||||||| ||||||||  ||||||||||||||||||||||    
T  26538096 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttg 26538195  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||| || ||||| |  ||||| |||| |||||||||  |||||||||||    
T  26538196 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaataacagttttagac 26538259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 182 - 309
Target Start/End: Original strand, 20444748 - 20444875
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  20444748 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttg 20444847  T
Q  282 ttgcatttttcgtcctacctcctatttt 309  Q
    ||||| ||||||||||||| || |||||    
T  20444848 ttgcagttttcgtcctaccccccatttt 20444875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 183 - 346
Target Start/End: Original strand, 43058333 - 43058495
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||| |||||||||||||||| |||||| ||| | |||||||| |||||||| ||||||||| |||||||||||||||||||||||    
T  43058333 ggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 43058432  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||| ||||| || ||||| |  ||||| ||||| ||||||||| |||||||||||    
T  43058433 tgcatttttcgttctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 43058495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 178 - 346
Target Start/End: Original strand, 3025461 - 3025627
Alignment:
Q  178 aattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatt 277  Q
    ||||||| || |||||| ||||||||||||||||||||||||||||||||| | ||||||| ||||||||| ||||||||| |||||||||| |||||||    
T  3025461 aattaggtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatt 3025560  T
Q  278 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||||||| || ||||| |  ||| | ||||||| ||||||| |||||||||||    
T  3025561 tttgttgcatttttcgtcctacc-cccatttt-attctcaaaaaacgcaaagaaatgacagttttagac 3025627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 28847242 - 28847122
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||| | ||||||| ||||||||| | ||||||| |||||||||||||||||||||    
T  28847242 taggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcattttt 28847143  T
Q  281 gttgcatttttcgtcctacct 301  Q
    |||||||||||||||||||||    
T  28847142 gttgcatttttcgtcctacct 28847122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 182 - 340
Target Start/End: Original strand, 7446341 - 7446497
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||||| ||||||||| |||| ||||||||||||||||     
T  7446341 aggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttta 7446440  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagtt 340  Q
    |||||||||||||| |||| || ||||| |  ||||| ||||||||||||||| |||||    
T  7446441 ttgcatttttcgtcatacc-cccatttt-attctccaaaaacgcagagaaatgacagtt 7446497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 20440579 - 20440461
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||| ||||||||| |||| |||| ||||||||||    
T  20440579 ttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttt 20440480  T
Q  280 tgttgcatttttcgtccta 298  Q
    ||||||| |||||||||||    
T  20440479 tgttgcagttttcgtccta 20440461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 35779708 - 35779834
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||||||||||| | ||||||||||| | |||||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgt 35779807  T
Q  283 tgcatttttcgtcctacctcctatttt 309  Q
    ||||||||| |||||||| || |||||    
T  35779808 tgcattttttgtcctaccccccatttt 35779834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 184 - 298
Target Start/End: Complemental strand, 35781207 - 35781093
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| | ||| ||||||||||||| |||||||||   ||||||||||||||||||||||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgtt 35781108  T
Q  284 gcatttttcgtccta 298  Q
    |||||||||||||||    
T  35781107 gcatttttcgtccta 35781093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 185 - 309
Target Start/End: Original strand, 8972239 - 8972363
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    |||||||||||||||||||||||||||||||| | ||||||||| | ||| |||||||| |||| |||||||||| ||| ||||||||||||||||||||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttg 8972338  T
Q  285 catttttcgtcctacctcctatttt 309  Q
    |||||||||| ||||| ||||||||    
T  8972339 catttttcgttctaccccctatttt 8972363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 185 - 296
Target Start/End: Original strand, 15551501 - 15551612
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    |||||||||||||||||||||||||||||||  ||||||||||| | ||| |||| |||||||| | |||||||  |||||||| |||||||||||||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttg 15551600  T
Q  285 catttttcgtcc 296  Q
    ||||||||||||    
T  15551601 catttttcgtcc 15551612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 185 - 300
Target Start/End: Complemental strand, 15552596 - 15552482
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    ||||||||||||||||||| |  ||||||||||||||||||||| |  ||| |||||||||||| |||||||||| ||| ||||||||||||||||||||    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttg 15552498  T
Q  285 catttttcgtcctacc 300  Q
     |||||||||||||||    
T  15552497 tatttttcgtcctacc 15552482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 179 - 346
Target Start/End: Complemental strand, 28143579 - 28143414
Alignment:
Q  179 attaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattt 278  Q
    ||||||||||||| |||||||||||||||  ||||| ||  ||||||||| | ||||||||  ||| |||| ||||||||| |||| | || |||||| |    
T  28143579 attaggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgt 28143480  T
Q  279 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    || ||||| |||| ||||||| |||||||||| ||||||||||||||||||||||| |||||||||||    
T  28143479 tt-ttgcagttttagtcctacgtcctattttc-aactccagaaacgcagagaaatgacagttttagac 28143414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 181 - 346
Target Start/End: Complemental strand, 14942394 - 14942228
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatca--ttt 278  Q
    ||||||||||||||||||||||| |||  ||||| ||  ||||||||| | ||| || |  ||| |||| ||||||||| |||| | ||||||||  |||    
T  14942394 taggcttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaattatcatgttt 14942295  T
Q  279 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    || ||||| |||| ||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||    
T  14942294 tttttgcagttttagtcctacatcctattttc-aactccagaaatgcagagaaatcgcagttttagac 14942228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 182 - 342
Target Start/End: Complemental strand, 31797324 - 31797166
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||||||||||||||   ||||| ||  ||||||||| | ||| ||||  ||| |||| ||||||||  |||| | || ||| || |||     
T  31797324 aggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactat-atgtttt 31797226  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagtttt 342  Q
    ||||| |||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||    
T  31797225 ttgcagttttagtcctacctcctattttc-aactctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 183 - 344
Target Start/End: Original strand, 4355755 - 4355915
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    ||||||||||||||||||||||| |  ||||| ||||||||||||||| ||| | ||  ||| |||| ||||||||| |||| | || ||| || ||| |    
T  4355755 ggcttaattacacttttggtccttgcattttgacctactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttt 4355853  T
Q  283 tgcatttttcgtcctacct-cctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    |||| |||| |||||| || ||||||||| ||||||||||||||| | ||||| |||||||||    
T  4355854 tgcagttttagtcctatctccctattttc-aactccagaaacgcacataaatgacagttttag 4355915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 344
Target Start/End: Original strand, 62954 - 63117
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||||||||||||||||| |||||||    ||||| || |||||||||| | ||||| || ||||||||| ||||||||| |||||| || ||| || ||    
T  62954 ttaggcttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactat-atgtt 63052  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | ||||| |||| |||||| ||||   |||| ||||| ||||||||| | ||||| |||||||||    
T  63053 ttttgcagttttagtcctatctccctatttccaactcaagaaacgcacataaatgacagttttag 63117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 344
Target Start/End: Complemental strand, 20128286 - 20128123
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||||||||||||||||||||||||| |  ||||  || |||||||||||| ||||| ||  ||| ||||  |||||||| |||||| || ||| || ||    
T  20128286 ttaggcttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccttaaactat-atgtt 20128188  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | ||||| |||| |||||| ||||   |||| ||||||||||||||| | ||||| |||||||||    
T  20128187 ttttgcaattttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttag 20128123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 38007947 - 38008110
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||||||||||||||||||||||||| |  ||||| || |||||||||||| ||||| ||  ||| |||| ||||||||| |||| | || |||   |||    
T  38007947 ttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttt 38008046  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagtttta 343  Q
    | ||||| |||| ||| || ||||   |||| ||||||| ||||||| ||||||| ||||||||    
T  38008047 ttttgcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagtttta 38008110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 344
Target Start/End: Original strand, 44219642 - 44219804
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||    |||||  | |||||| ||| |  |||| || |||| |||| ||||||||| |||||| |||||| || |||    
T  44219642 taggcttaattacacttttggtccttccattttgatcaactcacaaaaatgatcctaccttttttaaatcgaacaaaattgtccttaaattat-atgttt 44219740  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
     ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||| |||||||||    
T  44219741 tttgcagttttagtcctatctccctgtttccaactccagaaacgcacagaaatgacagttttag 44219804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 183 - 344
Target Start/End: Original strand, 42192240 - 42192400
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    ||||||||||||||||||||||||   ||||| || |||||||||| | ||||| ||  ||| |||| ||||||||| |||| | || ||| || ||| |    
T  42192240 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttt 42192338  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    |||| |||| |||||| ||||   |||| ||||||||||||||| | ||||| |||||||||    
T  42192339 tgcagttttagtcctatctccctatttctaactccagaaacgcacataaatgacagttttag 42192400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 344
Target Start/End: Complemental strand, 42192790 - 42192628
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||  ||||| || |||||||||| | ||||| ||  ||| |||| ||||||||| |||| | || ||    ||||     
T  42192790 aggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactagatgttttt 42192691  T
Q  282 ttgcatttttcgtccta-cctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| |||| ||| || || |||| |||| ||||||||||||||| ||||||| |||||||||    
T  42192690 ttgcagttttagtcatatcccccta-tttccaactccagaaacgcacagaaatgacagttttag 42192628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 344
Target Start/End: Complemental strand, 43216256 - 43216095
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||||||| ||||| | |||||| || |||||||||||| ||||| ||  ||| |||| ||||||||| |||| | || ||| || |||     
T  43216256 aggcttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atatttt 43216158  T
Q  282 ttgcatttttcgtcctacctc-ctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| |||| |||||| ||| ||| |||| ||||||||||| ||| ||||||| || ||||||    
T  43216157 ttgcagttttagtcctatctctcta-tttccaactccagaaatgcacagaaatgacaattttag 43216095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 11539636 - 11539798
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||    ||||| || |||||||||| | |||||    |||| |||| ||||||||| |||||| || |||   ||||     
T  11539636 aggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtccttaaactatatgttttt 11539735  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| | ||||| |||||||||    
T  11539736 ttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttag 11539798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 344
Target Start/End: Original strand, 15550669 - 15550834
Alignment:
Q  179 attaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattt 278  Q
    |||||| ||||||||||||||| |||| |  || || || |||||||||||| ||||| ||  ||| |||| ||||||||| |||| | || |||   ||    
T  15550669 attaggtttaattacacttttgatccttgcattctgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtt 15550768  T
Q  279 ttgttgcatttttcgtcctacct-cctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    || ||||| |||| ||||||  | ||||||||| ||||||||||||||| ||||||| |||||||||    
T  15550769 tttttgcagttttagtcctatttccctattttc-aactccagaaacgcacagaaatgacagttttag 15550834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 344
Target Start/End: Complemental strand, 16175900 - 16175735
Alignment:
Q  179 attaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattt 278  Q
    ||||||| |||||||||||||||||||    ||||  || |||||||||||| ||| | ||  ||| |||| ||||||||| |||||| || |||   ||    
T  16175900 attaggcataattacacttttggtccttacatttttaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccttaaactatatgtt 16175801  T
Q  279 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    || ||||| |||| |||||| ||||   |||| ||||||||||||||| | ||||| |||||||||    
T  16175800 tttttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttag 16175735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 183 - 322
Target Start/End: Complemental strand, 6949990 - 6949850
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattat-catttttg 281  Q
    ||||||||||||||||||||||| |  ||||| || |||||||||||| ||||| |   ||| |||||||||||||| |||| | || |||   |||||     
T  6949990 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacatcttttaaatagaacaaaatcgtccctaaactatatttttttt 6949891  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaa 322  Q
    ||||| |||| |||||| ||||   ||||||||||||||||    
T  6949890 ttgcagttttagtcctatctccatatttcaaactccagaaa 6949850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 16953479 - 16953320
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    |||||||||||||||||||||| |  ||||| || ||||| |||||| ||||| ||  ||| |||| ||||||||  |||| | || ||| || ||| ||    
T  16953479 gcttaattacacttttggtccttgcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaaatgtccctaaagtat-atgtttttt 16953381  T
Q  284 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||| |||| |||||| ||||   |||| ||||||| ||||||| ||||||| |||||||||    
T  16953380 gcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttag 16953320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 180 - 344
Target Start/End: Complemental strand, 33921161 - 33920997
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||    ||||| || |||||||||| | |||||  | |||| |||| ||||||||| ||| || || ||    |||    
T  33921161 ttaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactaaatgttt 33921062  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | ||||| |||| |||||| ||||   |||| ||||| ||||||||| ||||||| |||||||||    
T  33921061 ttttgcagttttagtcctatctccctatttccaactctagaaacgcacagaaatgacagttttag 33920997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 32418158 - 32418317
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||||| ||||||| |  ||||| || |||||||||||| ||||| ||  |||  ||| ||||||||| |||| | || ||| || |||     
T  32418158 aggcttaattacacttatggtccttgcattttgaccaactcacgaaattggtcctacctcttt--aatcgaacaaaatcgtccctaaactat-atatttt 32418254  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| |||| ||| || |||||  |||| ||||||||||||||| ||||||| || ||||||    
T  32418255 ttgcagttttagtcatatctccttatttccaactccagaaacgcacagaaatgacatttttag 32418317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 6949450 - 6949612
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||| ||||||||||    ||||| |  |||||||||| | |||||  | |||| |||| ||||||||| |||||| || |||   ||||     
T  6949450 aggcttaattacatttttggtcctatcattttgactaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctttaactatatgttttt 6949549  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| |||| |||||| ||||   |||| ||||||| ||||||| ||||||| |||||||||    
T  6949550 ttgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttag 6949612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 273
Target Start/End: Complemental strand, 25336150 - 25336056
Alignment:
Q  179 attaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattat 273  Q
    ||||||||||||||||||||||||||| |  ||||| || |||||||||||| ||||| |   ||| |||| ||||||||| |||| | ||||||    
T  25336150 attaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacttcttttaaatcgaacaaaatcgtccctaaattat 25336056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 344
Target Start/End: Complemental strand, 38008498 - 38008337
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||    ||||| || |||||||||| | |||||  | |||| |||| ||||||||| |||||| || ||| || |||     
T  38008498 aggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtttt 38008400  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| |||| |||||| ||||   |||| ||||||| ||||||| | |||||  ||||||||    
T  38008399 ttgcagttttagtcctatctccctatttccaactccataaacgcacataaatgatagttttag 38008337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 344
Target Start/End: Original strand, 43160007 - 43160170
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattat-catttt 279  Q
    |||| ||||||||| |||||||||| |  |||||  | |||||||||||| ||| | ||  ||| |||| ||||||||| |||| | || ||| ||||||    
T  43160007 taggattaattacatttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatacatttt 43160106  T
Q  280 tgttgcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | ||||| |||| |||||| |||| ||||||||| ||||||||||||| | ||||| |||||||||    
T  43160107 t-ttgcagttttagtcctatctccctattttcaa-ctccagaaacgcacataaatgacagttttag 43160170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 343
Target Start/End: Complemental strand, 43160558 - 43160397
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||| ||||||    ||||| |  |||||||||| | |||||  | |||| |||| |||| |||| |||||| || |||   ||||     
T  43160558 aggcttaattacactttaggtcctaccattttgacaaactcacgaaaatggtcctatcttttttaaatcgaactaaatcgtccttaaactatatgttttt 43160459  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagtttta 343  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||| ||||||||    
T  43160458 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 43160397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 275
Target Start/End: Complemental strand, 2190612 - 2190530
Alignment:
Q  193 cacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatca 275  Q
    ||||||||||| |||  ||||| ||  ||||||||||| |||||||| |||| |||| ||||||||| |||| | ||||||||    
T  2190612 cacttttggtcatcgcattttgaccagctcacgaaattggtcctgcctttttcaaatcgaacaaaatcgtccctaaattatca 2190530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 20127735 - 20127897
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||    ||||| || | |||||||| | |||||  | |||| |||| ||||||||| |||||| || |||   ||||     
T  20127735 aggcttaattacacttttggtcctaccattttgaccaattcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 20127834  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| |||| |||||| ||||   |||| ||| ||||||||||| | ||||| || ||||||    
T  20127835 ttgcagttttagtcctatctccctatttccaaccccagaaacgcacaaaaatgacaattttag 20127897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 264
Target Start/End: Complemental strand, 24140224 - 24140139
Alignment:
Q  179 attaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtcc 264  Q
    |||||||||||||||||||||| ||||||  | ||| || |||||||||| | ||||| || |||| ||||  |||||||| ||||    
T  24140224 attaggcttaattacacttttgttcctcgcatcttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtcc 24140139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 3824251 - 3824179
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaa 258  Q
    ||||||| |||||||||| |||  ||||  || |||||||||||| ||| ||||||||| |||| ||||||||    
T  3824251 ttaattatacttttggtcatcgcattttaaccaactcacgaaattggtcatgccctttttaaatcgaacaaaa 3824179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 154; Significance: 1e-81; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 184 - 369
Target Start/End: Original strand, 5539817 - 5540002
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 5539916  T
Q  284 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    | ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  5539917 gtatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttaggcggttttagacctacccctatgct 5540002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 182 - 369
Target Start/End: Complemental strand, 18984665 - 18984478
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  18984665 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18984566  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||| || ||||||||||    
T  18984565 ttgcatttttcgtcctacctcctattttcaaactctagaaacacagagaaatggcagttttaggcggttttagaccttcccctatgct 18984478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 185 - 369
Target Start/End: Complemental strand, 17433758 - 17433574
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    ||||||||||||||||||||||||||| |||||||||||||||| | ||| ||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 17433659  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  17433658 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacggttttagacctacccctatgct 17433574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 182 - 369
Target Start/End: Complemental strand, 39154566 - 39154379
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||| | ||||||||||||||||||||||||||||||    
T  39154566 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttg 39154467  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||| |||||||||| |||||||||||||    
T  39154466 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttaggcggttttagacctacccctatgct 39154379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 176 - 369
Target Start/End: Complemental strand, 15173645 - 15173453
Alignment:
Q  176 ataattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatca 275  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||| |||||||| ||||||||||||||||||||||||||    
T  15173645 ataaataggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatca 15173547  T
Q  276 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  15173546 tttttgttgcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 15173453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 181 - 369
Target Start/End: Original strand, 50970276 - 50970464
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||  ||||||||| |||||||||||||||||||||    
T  50970276 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcattttt 50970375  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | |||||||||| |||||||||||||    
T  50970376 gttgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttttggcggttttagacctacccctatgct 50970464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 181 - 370
Target Start/End: Original strand, 15646190 - 15646379
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||| |||||||||||||||||    
T  15646190 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcattttt 15646289  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgcta 370  Q
    |||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| ||||||||| |||||||||| ||||||||||||||    
T  15646290 gttgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttaggcggttttagacctacccctatgcta 15646379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 180 - 369
Target Start/End: Original strand, 21856039 - 21856228
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||| ||||||||||||||||||||||||||||||  |||||||||||| | ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  21856039 ttagacttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 21856138  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  21856139 tgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 21856228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 183 - 369
Target Start/End: Complemental strand, 29870164 - 29869978
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| | |||||||| |||||||| ||||||||| |||||||||||||||||||||||    
T  29870164 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 29870065  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||| |||||||||| |||||| ||||||    
T  29870064 tgcatttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttaggcggttttagacctacccatatgct 29869978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 191 - 369
Target Start/End: Original strand, 33143925 - 33144103
Alignment:
Q  191 tacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcatttt 290  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| ||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatt 33144024  T
Q  291 tcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  33144025 tcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 33144103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 184 - 369
Target Start/End: Original strand, 8678542 - 8678727
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| | ||||||| ||||||||||||||||||||||||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgtt 8678641  T
Q  284 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||| ||||||||| ||||||||||  ||||||||||||    
T  8678642 gcatttttcgtcctacctgctattttcaaacttcagaaacgcaaagaaatgacagttttaggcggttttagacatacccctatgct 8678727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 183 - 346
Target Start/End: Complemental strand, 29307487 - 29307324
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307388  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29307387 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 29307324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 184 - 369
Target Start/End: Complemental strand, 4636515 - 4636330
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||| ||||||||| | ||||||||||||||||||||||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgtt 4636416  T
Q  284 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||  || ||||||| |||||||||||||    
T  4636415 gcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttatgcgattttagacctacccctatgct 4636330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 26859059 - 26859231
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||| | |||||||| |||||||| ||||||||| |||||||||||||||||||||||    
T  26859059 ggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 26859158  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttaga 355  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |   |||||||| ||||||||||    
T  26859159 tgcatttttcgtcctacctcatattttcaaactccagaaacgcagagaagtaatagttttaggcggttttaga 26859231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 180 - 346
Target Start/End: Complemental strand, 9019511 - 9019345
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||| | || ||||| |||||||| ||||||||| |||| |||||||||||||||    
T  9019511 ttaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttt 9019412  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||    
T  9019411 tgttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttagac 9019345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 17112282 - 17112467
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||| ||| |||||||  ||||||| |||||| ||   ||||||||||||||||| ||||| |||||||||||||||||||| |    
T  17112282 ggcttaattacacttttggttctcatgttttgatctactcatgaaattggtag-gcccttttaaaatagaataaaatagtccttcaattatcatttttat 17112380  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||| |||||||||| |||||||||||||    
T  17112381 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttaggcggttttagacctacccctatgct 17112467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 186 - 346
Target Start/End: Original strand, 15173099 - 15173258
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgttgc 15173198  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  15173199 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 15173258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 182 - 346
Target Start/End: Complemental strand, 50970824 - 50970661
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  50970824 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 50970725  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  50970724 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 50970661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 181 - 346
Target Start/End: Original strand, 18984117 - 18984281
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  18984117 taggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18984216  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||||| || ||||| |  ||||| |||||||||||||||  ||||||||||    
T  18984217 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgatagttttagac 18984281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 185 - 346
Target Start/End: Complemental strand, 33144462 - 33144302
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||| ||||||| ||||||||||||||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttg 33144363  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  33144362 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 33144302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 182 - 346
Target Start/End: Complemental strand, 5540364 - 5540201
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||| |||| |||| ||||||||||||||||||||||    
T  5540364 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttg 5540265  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  5540264 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 5540201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 182 - 346
Target Start/End: Complemental strand, 15646741 - 15646578
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |  |||| ||||||||||| ||||||||| ||||||||||||||||||||||    
T  15646741 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 15646642  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  15646641 ttgcatttttcgtcctacccccaatttt-attctccaaaaacgcagagaaatgacagttttagac 15646578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 184 - 367
Target Start/End: Original strand, 5962579 - 5962762
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    ||||||||||| |||||||||||||||| ||| ||| |||||||| | |||| |||||||||||| ||||||||| |||| ||||| |||||||||||||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgtt 5962678  T
Q  284 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatg 367  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| |||||||| |  ||||||||||    
T  5962679 gcatttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttaggcggttttaaacttacccctatg 5962762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 183 - 346
Target Start/End: Complemental strand, 8679086 - 8678925
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    ||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  8679086 ggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgt 8678987  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||||| ||||| |  ||||| ||| ||||||||||| |||||||||||    
T  8678986 tgcatttttcgtcctacctcc-atttt-attctccaaaaatgcagagaaatgacagttttagac 8678925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 183 - 346
Target Start/End: Original strand, 29306953 - 29307115
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| | ||| || |||||||||| ||||||||| |||||||||||||||||||||||    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307052  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  29307053 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 29307115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 186 - 346
Target Start/End: Complemental strand, 5963120 - 5962961
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||||||||||||||||||||||||||||||||||||| |  || |||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgttgc 5963021  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  5963020 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 5962961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 182 - 346
Target Start/End: Original strand, 29869619 - 29869782
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| | ||| ||||||||||||| ||||||||| |||||||||||||| |||||||    
T  29869619 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatttttg 29869718  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  29869719 ttgcatttttcgtcctacaccccatttt-attctccaaaaacgcagagaaatgacagttttagac 29869782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 181 - 346
Target Start/End: Complemental strand, 26859606 - 26859443
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||| || |||||||||||||||| ||||||| | |||||||||||||||||||||    
T  26859606 taggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcattttt 26859507  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||||| || ||||  |  ||||| ||||||||||||||   ||||||||||    
T  26859506 gttgcatttttcgtcctaccccccattt--attctccaaaaacgcagagaaataatagttttagac 26859443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 180 - 333
Target Start/End: Original strand, 9018970 - 9019122
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| | || |||||||||||||| ||||||||| |||| ||||| |||||||||    
T  9018970 ttaggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttt 9019069  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 333  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||    
T  9019070 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 9019122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 183 - 346
Target Start/End: Complemental strand, 21856588 - 21856426
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |  ||||||| |||||||| ||||||||| |||||||||| |||||||||||     
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgc 21856489  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  21856488 tgcatttttcgtcctactccccatttt-attctccaaaaacgcagagaaatgacagttttagac 21856426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 183 - 346
Target Start/End: Original strand, 17433216 - 17433378
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |   | ||||||||||||| ||||||||| |||||||||| ||||||||||||    
T  17433216 ggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 17433315  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||| ||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  17433316 tgcatttttcatcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 17433378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 182 - 309
Target Start/End: Original strand, 52268289 - 52268416
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||| |||||||||  ||| |||| ||||||||||||    
T  52268289 aggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttg 52268388  T
Q  282 ttgcatttttcgtcctacctcctatttt 309  Q
    ||||| ||||||||||||| || |||||    
T  52268389 ttgcacttttcgtcctaccccccatttt 52268416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 185 - 346
Target Start/End: Original strand, 39154021 - 39154181
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    ||||||||||||||||||| || ||||||||| ||||||||||| |  || ||||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttg 39154120  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||| || ||| | |  ||||| ||||||| ||||||| |||||||||||    
T  39154121 catttttcgtcctaccccccattct-attctccaaaaacgcatagaaatgacagttttagac 39154181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 185 - 299
Target Start/End: Complemental strand, 52269291 - 52269177
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    |||||||||||||||||||||||||||||| | |||||| |||||  || |||||||||||||| |||||||||  ||| |||| |||||||||||||||    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttg 52269192  T
Q  285 catttttcgtcctac 299  Q
    || ||||||||||||    
T  52269191 cacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 180 - 269
Target Start/End: Complemental strand, 2733505 - 2733416
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaa 269  Q
    ||||||||||||| |||||||||||| ||||||||||||| || ||||||| ||||||||||||||||| ||||||||| ||||||||||    
T  2733505 ttaggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 47826966 - 47827039
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaa 258  Q
    ||||||||||||||||||||||||||||||| |||||||||||| | ||| ||||||||||||||| |||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 191 - 283
Target Start/End: Complemental strand, 47827125 - 47827033
Alignment:
Q  191 tacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    |||||||||| ||  | ||||||||||||||||||||| | ||| ||||||||||||| |||||||||| |||||| ||||||||||||||||    
T  47827125 tacacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcatttttgtt 47827033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 180 - 346
Target Start/End: Complemental strand, 44802720 - 44802555
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||||||||||||||||||||||||| |  ||||| ||  ||||||||| | ||| ||||  ||| |||  ||||||||| |||| | || |||||| ||    
T  44802720 ttaggcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactatcatgtt 44802621  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    | ||||| |||| || ||||||||||||||| |||||||||||| |||| ||||| || ||||||||    
T  44802620 ttttgcagttttagttctacctcctattttc-aactccagaaacacagaaaaatgacaattttagac 44802555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 177 - 346
Target Start/End: Original strand, 39485059 - 39485226
Alignment:
Q  177 taattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcat 276  Q
    |||||||| ||||||||||||||||||||||  ||||| |   ||||||||| | ||||| ||  ||| |||| ||||||||| |||| | || ||| ||    
T  39485059 taattaggtttaattacacttttggtcctcgcattttgactagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactat-at 39485157  T
Q  277 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
     ||| ||||| |||| |||||| ||||||||||| |||| ||||||| |||||| ||| |||||||||||    
T  39485158 gttttttgcagttttagtcctatctcctattttc-aacttcagaaacacagagagatgacagttttagac 39485226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 346
Target Start/End: Complemental strand, 17088690 - 17088524
Alignment:
Q  178 aattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatt 277  Q
    |||||||||||||||||||||||||||||   |||||  |  ||||||||| | ||| ||||  ||| ||||  |||||||  |||| | || ||| ||     
T  17088690 aattaggcttaattacacttttggtcctctcattttgaacagctcacgaaaatggtcatgcctctttcaaatcaaacaaaaccgtccctaaactat-ata 17088592  T
Q  278 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||| ||||| |||| || |||||||||||||||||| || ||||||||||||||||| |||||||||||    
T  17088591 ttttttgcagttttagttctacctcctattttcaaa-tctagaaacgcagagaaatgacagttttagac 17088524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 178 - 344
Target Start/End: Original strand, 9992149 - 9992315
Alignment:
Q  178 aattaggcttaattacacttttggtcct-cgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcat 276  Q
    |||||||||||||||||||||||||||| |   ||||| || ||||||| || | |||||  | |||| |||| |||||||||||||||| || ||| ||    
T  9992149 aattaggcttaattacacttttggtcctaccatttttgaccaactcacggaaatggtcctatcttttttaaatcgaacaaaatggtccttaaactat-at 9992247  T
Q  277 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
     ||| ||||| |||| |||||| ||||   |||| |||||||||||| || ||||||| |||||||||    
T  9992248 gttttttgcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttag 9992315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 178 - 333
Target Start/End: Complemental strand, 45048686 - 45048533
Alignment:
Q  178 aattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatt 277  Q
    ||||||| ||||||||||||||||||||||  ||||| ||   |||||||| | ||| | ||  |||  ||| ||||||||  |||||  || ||||||     
T  45048686 aattaggtttaattacacttttggtcctcgcattttgaccagttcacgaaaatggtcatacctctttccaatcgaacaaaaccgtccta-aactatcatg 45048588  T
Q  278 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 333  Q
    ||| ||||| |||| |||||||||||||||||| ||||||||||||||||||||||    
T  45048587 ttttttgcagttttagtcctacctcctattttc-aactccagaaacgcagagaaat 45048533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 333
Target Start/End: Complemental strand, 9833698 - 9833549
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||  ||||||| |||| ||  |||| || |||||||||| ||||| ||||  ||| |||| ||||||||| |||| | || ||| || ||| |    
T  9833698 ggcttaattgtacttttgatccttgtactttgaccaactcacgaaaatagtcatgcctctttcaaatcgaacaaaatcgtccctaaaatattatgttttt 9833599  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 333  Q
    |||| |||| |||||||| ||||||||| ||||||||||||||| ||||||    
T  9833598 tgcagttttagtcctaccccctattttc-aactccagaaacgcacagaaat 9833549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 346
Target Start/End: Original strand, 17088243 - 17088312
Alignment:
Q  276 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||| ||||| |||| |||||||||||||||||||| || |||||| |||||||||||||||||||||||    
T  17088243 ttttttttgcaattttagtcctacctcctattttcaa-cttcagaaatgcagagaaatggcagttttagac 17088312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 346
Target Start/End: Original strand, 45048158 - 45048316
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    |||||||||||||||||||| |  ||||| || ||| |||||| | || || ||  ||| |||| ||||||||| |||| | || ||| || ||| ||||    
T  45048158 ttaattacacttttggtccttgcattttgaccaacttacgaaaatggttctacctcttttaaattgaacaaaatcgtccataaactat-atgttttttgc 45048256  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    | |||| |||||||||| ||||||||| ||||||||||||| ||||||  |||||||||||    
T  45048257 agttttagtcctacctcatattttcaa-ctccagaaacgcatagaaataacagttttagac 45048316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 346
Target Start/End: Original strand, 4636033 - 4636134
Alignment:
Q  243 ttaaaatagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagtttt 342  Q
    |||||| ||||||||  |||||||||| ||||||||||||||||||||| || ||||| || ||||| |  || || ||||||||||||||| |||||||    
T  4636033 ttaaaacagaacaaac-ggtccttcaagtatcatttttgttgcattttttgttctaccccccatttt-attcttcaaaaacgcagagaaatgacagtttt 4636130  T
Q  343 agac 346  Q
    ||||    
T  4636131 agac 4636134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 50419806 - 50419725
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtcc 264  Q
    ||||||||| ||||||||||| |||  ||| | || |||||||||||| |||||||| ||||||||| |||||||| |||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaacggtcc 50419725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 342
Target Start/End: Complemental strand, 29021415 - 29021252
Alignment:
Q  179 attaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatca-tt 277  Q
    ||||||||||||| ||||||||||||||   ||||| ||  ||||||||| |  || ||||  ||| |||| ||||||||| |||| | ||||||||       
T  29021415 attaggcttaattgcacttttggtcctcacattttgaccagctcacgaaaatgttcatgcctctttcaaatcgaacaaaatcgtccctaaattatcacgg 29021316  T
Q  278 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagtttt 342  Q
    ||| ||||| |||| ||| |||| ||||||||| ||||||||||||||| | ||||| |||||||    
T  29021315 ttttttgcagttttagtcttaccccctattttc-aactccagaaacgcacataaatgacagtttt 29021252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 29438929 - 29439011
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtcc 264  Q
    |||||||||||||||||||||||| |  ||||| || |||||||||||| ||||| ||  ||| |||| ||||||||| ||||    
T  29438929 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtcc 29439011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 344
Target Start/End: Complemental strand, 17641912 - 17641750
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatt----tttg 281  Q
    ||||||||||||||||||||||  ||||| || |||||||||| | ||| | ||  ||| |||| ||||||||| |||| | || |||  ||    |||     
T  17641912 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatttttattttttt 17641813  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||| |||||||||    
T  17641812 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 17641750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 340
Target Start/End: Complemental strand, 44291769 - 44291701
Alignment:
Q  271 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagtt 340  Q
    |||||| ||| ||||| |||| |||||||| ||||||||| |||||||||||| || |||||||||||||    
T  44291769 tatcatgttttttgcagttttagtcctaccccctattttc-aactccagaaacacatagaaatggcagtt 44291701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 344
Target Start/End: Original strand, 50926232 - 50926392
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatca-tttttgtt 283  Q
    |||||||||| |||||||||||   ||||| ||  ||||||||| || || | ||  ||| |||| ||||||||| |||| | || ||||| ||||| ||    
T  50926232 cttaattacagttttggtcctcccattttgaccagctcacgaaaataatcatacctctttcaaatcgaacaaaatcgtccctaaactatcattttttttt 50926331  T
Q  284 gcatttttcgtcc-tacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||| |||| |||| |||||||||||||| |||||||||||| || | |||||| ||||||||    
T  50926332 gcagttttagtccttacctcctattttc-aactccagaaacacacataaatggtagttttag 50926392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 344
Target Start/End: Complemental strand, 34555926 - 34555766
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatca-tttttgtt 283  Q
    ||||||||||||||| |||||    ||||| || |||||||||| | |||||  | |||| |||| ||||||||| |||||| || |||   ||||| ||    
T  34555926 cttaattacacttttagtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttt 34555827  T
Q  284 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||| |||| ||| || ||||   |||| ||||||||||||||| ||||||| |||||||||    
T  34555826 gcagttttagtcatatctccctatttccaactccagaaacgcacagaaatgacagttttag 34555766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 344
Target Start/End: Complemental strand, 50926789 - 50926627
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    ||||||||||||||||||||||| |||  ||||| ||  ||||||||| | |||| | |  ||| |||| ||||||||  |||| | || ||||||||||    
T  50926789 taggcttaattacacttttggtcatcgcattttgaccagctcacgaaaatggtcccgtctctttcaaatcgaacaaaaccgtccctaaactatcattttt 50926690  T
Q  281 gttgcatttttcgtcc-tacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
     ||||| |||| |||| |||| ||||||||| ||||||| |||| || | |||||| ||||||||    
T  50926689 -ttgcagttttagtccttaccccctattttc-aactccataaacacacataaatggtagttttag 50926627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 344
Target Start/End: Original strand, 10278550 - 10278709
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    ||||||||||||||||||||| |  ||||| || ||||||||||||  |||| ||  ||| |||| ||||||||| |||| | || |||   |||| |||    
T  10278550 cttaattacacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttg 10278649  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    || |||| |||||| ||||   |||  ||||||||||||||| | ||||| || ||||||    
T  10278650 cagttttagtcctatctccccatttgcaactccagaaacgcacataaatgacaattttag 10278709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 30786770 - 30786932
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacg-aaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    ||||||||||||||||||||| || |  ||||| || ||||||| ||||| ||||| ||  ||| |||| ||||||||| |||| | || ||| || |||    
T  30786770 aggcttaattacacttttggttcttgcattttgaccaactcacgaaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atgttt 30786868  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
     ||||| |||| |||||| ||||   |||| ||||||| ||||||| ||||||| | |||||||    
T  30786869 tttgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacggttttag 30786932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 341
Target Start/End: Original strand, 23526659 - 23526815
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    ||||| |||||||||||||||||   ||||| ||  ||||||||| | ||||||||  ||| |||| |||||||||  ||| |  | |||||||||| ||    
T  23526659 gcttagttacacttttggtcctcacattttgaccagctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcatccctagactatcattttt-tt 23526757  T
Q  284 gcatttttcgt-cctacctcctattttcaaactccagaaacgcagagaaatggcagttt 341  Q
    ||| |||| || ||| || ||||||||| ||||||| ||||||| ||||||| ||||||    
T  23526758 gcagttttagtccctgccccctattttc-aactccaaaaacgcacagaaatgacagttt 23526815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 256
Target Start/End: Complemental strand, 39843571 - 39843497
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaa 256  Q
    |||||| |||||||||| ||||||||  ||| | || |||||||||||| |||||||| |||| |||| ||||||    
T  39843571 aggctttattacactttcggtcctcgcatttagaccaactcacgaaattggtcctgcctttttcaaatcgaacaa 39843497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 344
Target Start/End: Original strand, 44291303 - 44291462
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatca--tttttgt 282  Q
    ||||||| ||||||||||||||   ||||| ||  ||||||||| | ||  ||||  ||| |||| ||||||||| |||| | || |||||  ||||| |    
T  44291303 cttaattgcacttttggtcctcacattttgaccagctcacgaaaatggttatgcctctttcaaattgaacaaaatcgtccataaactatcatgttttttt 44291402  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    |||| |||| ||| |||||||| |||||||| |||||||||||| | |||| ||||||||||    
T  44291403 tgcagttttagtcatacctcctgttttcaaa-tccagaaacgcaca-aaatagcagttttag 44291462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 344
Target Start/End: Complemental strand, 52336057 - 52335896
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||| |||||||| ||    ||||| || ||||| |||||| ||||| ||  ||| |||| ||||||||| |||| | || ||| ||||||     
T  52336057 aggcttaattactcttttggttctatcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat-atttttt 52335959  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| |||| ||| || ||||   |||| ||||||||||||||| | ||||| |||||||||    
T  52335958 ttgcagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagttttag 52335896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 343
Target Start/End: Complemental strand, 9992701 - 9992542
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    ||||||||||||||||||||||| |  ||||| |  ||||| |||| | |||||  | |||| |||| ||||||||| || ||| || ||| || ||| |    
T  9992701 ggcttaattacacttttggtccttgcattttgacaaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtgcttaaactat-atgttttt 9992603  T
Q  283 tgcatttttcgtcctacct-cctattttcaaactccagaaacgcagagaaatggcagtttta 343  Q
    |||| | || |||||| || ||||||||| ||||||||||||||  ||||||| ||||||||    
T  9992602 tgcagtattagtcctatctccctattttc-aactccagaaacgcgtagaaatgacagtttta 9992542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 344
Target Start/End: Original strand, 8229732 - 8229800
Alignment:
Q  276 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||| |||||||||    
T  8229732 ttttttttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttag 8229800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 52233736 - 52233812
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaa 257  Q
    ||||||||||||||||||| ||||||| |||||  || ||| |||||||| || || ||||||| || | |||||||    
T  52233736 taggcttaattacacttttcgtcctcgggttttaaccaacttacgaaattggtgctacccttttcaagtcgaacaaa 52233812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 5e-81; HSPs: 92)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 177 - 369
Target Start/End: Complemental strand, 5137532 - 5137340
Alignment:
Q  177 taattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcat 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| | || ||||||||||||||||||||||||||||||||||||||||||    
T  5137532 taattaggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcat 5137433  T
Q  277 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||| |||||    
T  5137432 ttttgttgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccccatgct 5137340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 182 - 369
Target Start/End: Complemental strand, 20841107 - 20840920
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||| |||||||| ||||||||| ||||||||||||||||||||||    
T  20841107 aggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttg 20841008  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  20841007 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttaggcggttttagatatacccctatgct 20840920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 25853234 - 25853420
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 25853333  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||| ||| |||||||||    
T  25853334 tgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttaggcggttttagacctatccctatgct 25853420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 183 - 369
Target Start/End: Complemental strand, 37727475 - 37727289
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| | ||||||| ||||||||| ||||||||| |||||||||||||||||||||||    
T  37727475 ggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgt 37727376  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  37727375 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 37727289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 181 - 369
Target Start/End: Complemental strand, 4275911 - 4275723
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||| ||||||||| ||||||||| ||||||| |||||||||||||    
T  4275911 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcattttt 4275812  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  4275811 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 4275723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 182 - 362
Target Start/End: Original strand, 39555577 - 39555757
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  39555577 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttg 39555676  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 362  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||    
T  39555677 ttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctaccc 39555757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 175 - 369
Target Start/End: Complemental strand, 29801969 - 29801775
Alignment:
Q  175 tataattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatc 274  Q
    |||| ||||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||||||||||||| ||||||||| |||| ||||||||||    
T  29801969 tatatttaggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatc 29801870  T
Q  275 atttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||| |||||||    
T  29801869 atttttgttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagacggttttagacctacctctatgct 29801775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 180 - 369
Target Start/End: Complemental strand, 43973988 - 43973799
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||| ||||||||| |||| |||||||||||||||    
T  43973988 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 43973889  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||| | |||||||| |||||||||||||    
T  43973888 tgttgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatgct 43973799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 182 - 369
Target Start/End: Original strand, 31778652 - 31778839
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||| | ||||||||||||||||| ||||||||| ||||||||  ||||||||||||    
T  31778652 aggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttg 31778751  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||| ||||||    
T  31778752 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccgtatgct 31778839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 369
Target Start/End: Original strand, 17464487 - 17464677
Alignment:
Q  179 attaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattt 278  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||| | ||| ||||||||||||| ||||||||| |||||||||||||||||||    
T  17464487 attaggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 17464586  T
Q  279 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||| |||| ||||| |||||||||||||    
T  17464587 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttaggcggtgttagacctacccctatgct 17464677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 182 - 369
Target Start/End: Original strand, 27393660 - 27393847
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||| | |||||||| |||||||| ||||||||| ||||||||||||||||||||||    
T  27393660 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttg 27393759  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||| | |||||||| |||||||||||||    
T  27393760 ttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatgct 27393847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 182 - 357
Target Start/End: Complemental strand, 30098309 - 30098134
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  30098309 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 30098210  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatc 357  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||| ||||||||||||    
T  30098209 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttaggcggttttagatc 30098134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 180 - 369
Target Start/End: Original strand, 22424811 - 22425000
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||| |||||||||  ||||||| |||||| | || ||| |||||||||| ||||||||| ||||||||||||||||||||    
T  22424811 ttaggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttt 22424910  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||| |||||||||||||    
T  22424911 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaggcggttttagacctacccctatgct 22425000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 183 - 369
Target Start/End: Complemental strand, 23645010 - 23644823
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| |||| ||||||||||||||||||    
T  23645010 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgt 23644911  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatct-acccctatgct 369  Q
    |||||||||| ||||||||||||||||||||||| || |||||||||||||| ||||||||| |||||||||| || |||||||||||    
T  23644910 tgcatttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttaggcggttttagacctaacccctatgct 23644823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 186 - 369
Target Start/End: Original strand, 32534962 - 32535145
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||| ||||||||||||||||||||||||||    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 32535061  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||||||||| |||| | |||||||||| ||||||||| |||||||| | || ||||||||||    
T  32535062 atttttcgtcctacctcctattttcaaactctagaatcacagagaaatgacagttttaggcggttttataccttcccctatgct 32535145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 181 - 361
Target Start/End: Original strand, 26837358 - 26837538
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||| ||||||||| |||||||||| || ||||||||||||||||||||| |||||||||||||| || | ||| ||| |||||||||||||||||||||    
T  26837358 taggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcattttt 26837457  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacc 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||    
T  26837458 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 26837538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 183 - 346
Target Start/End: Complemental strand, 39556122 - 39555960
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgt 39556023  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  39556022 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 39555960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 180 - 346
Target Start/End: Original strand, 20840557 - 20840722
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||| ||||||||||||||||||||    
T  20840557 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttt 20840656  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||||| || ||||| |  ||||  ||||||||||||||| |||||||||||    
T  20840657 tgttgcatttttcgtcctaccccccatttt-attctccttaaacgcagagaaatgacagttttagac 20840722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 181 - 347
Target Start/End: Complemental strand, 31779199 - 31779034
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  31779199 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 31779100  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacg 347  Q
    |||||||||||||||| ||| || ||||| |  ||||| ||||||||||||||| ||||||||||||    
T  31779099 gttgcatttttcgtcccaccccccatttt-attctccaaaaacgcagagaaatgtcagttttagacg 31779034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 186 - 367
Target Start/End: Complemental strand, 41047239 - 41047060
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||||||| | || || ||||||||||||||||||||| | || ||| |||||||||| |||| |||| | ||||||||||||||||||||||||    
T  41047239 ttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcatttttgttgc 41047142  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatg 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||    
T  41047141 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccatatg 41047060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 186 - 369
Target Start/End: Original strand, 24300560 - 24300742
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||| |||||||| |||||||||||| || |||||||| | |||||| |||||||||| |||| |||| ||| ||||||||||||||||||||||    
T  24300560 ttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttttgttgc 24300658  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||| ||||||    
T  24300659 aattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccatatgct 24300742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 186 - 369
Target Start/End: Original strand, 26274570 - 26274753
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||| ||||| |||| || |||||| |||||||||||| | ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26274669  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||||| ||||||||| | |||||||| ||||  |||||||    
T  26274670 atttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttaggcagttttagacctacgtctatgct 26274753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 181 - 346
Target Start/End: Original strand, 5136978 - 5137142
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||||    
T  5136978 taggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 5137077  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  5137078 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 5137142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 346
Target Start/End: Complemental strand, 24301104 - 24300939
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| | ||||||| |||||||| | |||||||||    
T  24301104 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttt 24301005  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  24301004 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 24300939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 48452982 - 48453144
Alignment:
Q  176 ataattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatca 275  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||| | |||||||| |||||||| ||||||||| ||||||||||||||||    
T  48452982 ataattaggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatca 48453081  T
Q  276 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagt 339  Q
    ||||||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| ||||    
T  48453082 tttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 182 - 346
Target Start/End: Original strand, 23644461 - 23644624
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||| |||||||||  |||||||||||||||||||||    
T  23644461 aggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttg 23644560  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||   ||||||||||    
T  23644561 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttagac 23644624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 186 - 346
Target Start/End: Original strand, 41046703 - 41046862
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    |||||||||||||||||||||||||||||||||| | |||||| | ||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  41046803 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 41046862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 182 - 346
Target Start/End: Complemental strand, 27394123 - 27393960
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||| ||||||||| | ||||||||||||||||||||    
T  27394123 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttttg 27394024  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||| | ||||||| || ||||| |  ||||| ||||||||||||||  |||||||||||    
T  27394023 ttgcattttccatcctacccccaatttt-attctccaaaaacgcagagaaataacagttttagac 27393960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 182 - 346
Target Start/End: Original strand, 37726928 - 37727091
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||||||||||||||||||||||| || || |||||| | || |||||||||||||| | ||||||| ||||||||||||||||||||||    
T  37726928 aggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37727027  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  37727028 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 37727091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 180 - 346
Target Start/End: Original strand, 30104479 - 30104643
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| | || | || ||||||||||||||||||||    
T  30104479 ttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttt 30104578  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||||| || ||||| |   || | ||||||||||||||| |||||||||||    
T  30104579 tgttgcatttttcgtcctacc-cccatttt-attatctaaaaacgcagagaaatgacagttttagac 30104643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 183 - 346
Target Start/End: Complemental strand, 32535508 - 32535342
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatc-----att 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||||     |||    
T  32535508 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaatt 32535409  T
Q  278 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||||||| || ||||| |  ||||| |||||||||||||||  ||||||||||    
T  32535408 tttgttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgatagttttagac 32535342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 186 - 309
Target Start/End: Complemental strand, 25612519 - 25612396
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||  ||| || ||||||||||||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgc 25612420  T
Q  286 atttttcgtcctacctcctatttt 309  Q
    ||||||||||||||| || |||||    
T  25612419 atttttcgtcctaccccccatttt 25612396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 183 - 346
Target Start/End: Original strand, 43973441 - 43973603
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |  |  ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 43973540  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||||| ||||  |||||||||||    
T  43973541 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagataaataacagttttagac 43973603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 180 - 346
Target Start/End: Complemental strand, 26837903 - 26837739
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| | || |||||| ||||||||||||||||| |||| ||||| |||||||||    
T  26837903 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgccc-tttaaaatagaacaaaacggtcattcaagtatcatttt 26837805  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||| |||||||| || ||||| |  ||||| ||| ||||||||||| |||||||||||    
T  26837804 tgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttagac 26837739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 185 - 346
Target Start/End: Complemental strand, 25853770 - 25853610
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    |||||||||||||||| |||||||||||||  |||||||||||| | ||| || | |||||||| |||||||||||||||||||||||||||||||||||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttg 25853671  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||  |||||||||||    
T  25853670 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttagac 25853610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 300
Target Start/End: Complemental strand, 32697244 - 32697128
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    ||||||||| | |||||||||||||||||| ||||||||||||||||||||  |||||||||||| |||||||||| || ||||||||||||||||||||    
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgtt 32697145  T
Q  284 gcatttttcgtcctacc 300  Q
    |||||||||||||||||    
T  32697144 gcatttttcgtcctacc 32697128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 176 - 346
Target Start/End: Complemental strand, 17465044 - 17464874
Alignment:
Q  176 ataattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatca 275  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||| || |||| | |||   ||||||||||||||||||||| ||||||||||||||||    
T  17465044 ataataaggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatca 17464945  T
Q  276 tttttgttgcat-ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||| |||| |||||||| || ||||| |  ||||| ||| ||||||||||| |||||||||||    
T  17464944 tttttgttgcatttttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttagac 17464874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 187 - 333
Target Start/End: Complemental strand, 22425354 - 22425209
Alignment:
Q  187 taattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgca 286  Q
    |||||||||||||||||||||||||| ||||||||||||||  | ||| ||||||| ||||| ||||||||| ||| |||||||||||||||||||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  287 tttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 333  Q
    |||||||||||||| || ||||| |  ||||| ||||||||||||||    
T  22425254 tttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 22425209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 23228552 - 23228427
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |  || |||||||||||||  ||||||||| |||||||||||||||||||| |    
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttat 23228454  T
Q  283 tgcatttttcgtcctacctcctatttt 309  Q
    ||||||||||||||||||||| |||||    
T  23228453 tgcatttttcgtcctacctcccatttt 23228427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 183 - 300
Target Start/End: Original strand, 29801356 - 29801473
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    ||||||||||||||||||||| |||||||||||| ||||||| ||| | ||||||||||||||||| ||||||||| |||||||||| ||||||||||||    
T  29801356 ggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 29801455  T
Q  283 tgcatttttcgtcctacc 300  Q
    ||||||||||||| ||||    
T  29801456 tgcatttttcgtcttacc 29801473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 180 - 309
Target Start/End: Complemental strand, 51474882 - 51474753
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||||||||| ||| ||||||||||||| | |||||||| |||||| | ||||||||||    
T  51474882 ttaggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatttt 51474783  T
Q  280 tgttgcatttttcgtcctacctcctatttt 309  Q
    ||||||||||||||||||||| || |||||    
T  51474782 tgttgcatttttcgtcctacccccaatttt 51474753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 184 - 297
Target Start/End: Original strand, 51473429 - 51473542
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||| |||||||||| |||||||  ||||||||||||||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgtt 51473528  T
Q  284 gcatttttcgtcct 297  Q
    ||| |||| |||||    
T  51473529 gcacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 50116954 - 50116828
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||||| ||| ||||||||| ||| ||||||||| |||| |||| |||||||||||||    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgt 50116855  T
Q  283 tgcatttttcgtcctacctcctatttt 309  Q
    |||| ||||||||||||| || |||||    
T  50116854 tgcaattttcgtcctaccccccatttt 50116828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 181 - 294
Target Start/End: Original strand, 45965936 - 45966049
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||| ||||||||| | |||||||  ||||||| |||||||||| |    
T  45965936 taggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgt 45966035  T
Q  281 gttgcatttttcgt 294  Q
    ||||||||||||||    
T  45966036 gttgcatttttcgt 45966049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 180 - 346
Target Start/End: Complemental strand, 26275114 - 26274950
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||| ||||||| | |||||| ||| |||||||| ||||||||||||| | ||||| ||||||||||| |||| |||| ||||| ||||||||||||||    
T  26275114 ttaggtttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcatttt 26275015  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||| |||||||||||||| || ||||| |  ||||| || |||||||||||| |||||||||||    
T  26275014 tgttgc-tttttcgtcctaccccccatttt-attctccaaaaccgcagagaaatgacagttttagac 26274950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 185 - 309
Target Start/End: Complemental strand, 25420684 - 25420560
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    |||||||||||||||| || |||| ||||| |||||||||||||||  ||  ||||||||||||||||| ||||| ||||||||||||| ||||||||||    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttg 25420585  T
Q  285 catttttcgtcctacctcctatttt 309  Q
    ||||||||||| |||| || |||||    
T  25420584 catttttcgtcataccccccatttt 25420560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 37220555 - 37220674
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | ||   || ||| ||||||||| |||| ||||| |||||||| |||||||||||    
T  37220555 taggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcattttt 37220654  T
Q  281 gttgcatttttcgtcctacc 300  Q
    |||||| |||||||||||||    
T  37220655 gttgcacttttcgtcctacc 37220674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 37222118 - 37222041
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaa 258  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||| |||||||| |||||||||    
T  37222118 taggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaa 37222041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 179 - 346
Target Start/End: Complemental strand, 36701646 - 36701480
Alignment:
Q  179 attaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattt 278  Q
    ||||| |||||||||||||||||||||||  ||||| ||  ||||||||| | ||| || |  ||| |||| |||||||||  ||| | || |||||| |    
T  36701646 attagacttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcatccctaaactatcatgt 36701547  T
Q  279 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    || ||||| |||| ||| |||||||||||||| |||||||||||| || |||||||||||||||||||    
T  36701546 tttttgcagttttagtcatacctcctattttc-aactccagaaacacatagaaatggcagttttagac 36701480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 25419145 - 25419242
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtcc-ttcaattatcattttt 280  Q
    |||| |||| |||||||||| ||||||||| || |||||||||||||||| |||||||||||||| |||||||||  |||| ||||||||||||||||    
T  25419145 gcttgattatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcattttt 25419242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 297
Target Start/End: Complemental strand, 18010271 - 18010176
Alignment:
Q  202 tcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcct 297  Q
    ||||| |||||| | |||||||||||| | || | |||||||||||| |||||||||| ||  |||||||||||||||||||||||||||||||||    
T  18010271 tcctcctgttttcgtctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcct 18010176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 346
Target Start/End: Complemental strand, 27200241 - 27200076
Alignment:
Q  179 attaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattt 278  Q
    ||||||||||||||||||||||||||| |  ||||| ||  ||||||||| | || |||||  ||| |||| |||||| |  |||||  || |||||| |    
T  27200241 attaggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtccta-aactatcatgt 27200143  T
Q  279 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    || ||||| |||| ||| |||||||||||||||| ||||||||||||||||||||| ||| |||||||    
T  27200142 tttttgcagttttagtcatacctcctattttcaa-ctccagaaacgcagagaaatgacaggtttagac 27200076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 51827956 - 51828117
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcct-gcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||| |  ||||| || |||||||||||| ||||| || ||||| |||| ||||||||| |||| | || ||| || |||    
T  51827956 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctctttt-aaatcgaacaaaatcgtccctaaactat-atgttt 51828053  T
Q  281 gttgcatttttcgtcctacct-cctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
     |||||||||| |||||| || ||||||||| ||||||||||||||| | ||||| |||||||||    
T  51828054 tttgcatttttagtcctatctccctattttc-aactccagaaacgcacataaatgacagttttag 51828117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 37076219 - 37076049
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    ||||||||||| ||||||||||||  |||||  |  ||||||||| | |||| |||  ||| |||| ||||||||| |||||  || |||||| ||| ||    
T  37076219 gcttaattacatttttggtcctcgcattttgatcagctcacgaaaatggtcccgcctctttcaaatcgaacaaaatcgtccta-aactatcatgtttttt 37076121  T
Q  284 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttaga 355  Q
     ||||||| ||| ||||| |||||||  ||||| ||||||| ||||||||||||||||||| | ||||||||    
T  37076120 acatttttagtcttaccttctattttttaactctagaaacgtagagaaatggcagttttaggcagttttaga 37076049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 344
Target Start/End: Original strand, 55389603 - 55389765
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    ||||| ||||||||||||||||||||   ||| | || |||||||||| | ||||| || |||| |||| ||||||||| |||||| || ||| || |||    
T  55389603 taggcataattacacttttggtcctcccatttcgaccaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactat-atgttt 55389701  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
     ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||| |||||||||    
T  55389702 tttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 55389765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 174 - 344
Target Start/End: Original strand, 49720362 - 49720531
Alignment:
Q  174 ttataattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattat 273  Q
    |||||| |||||||||||||||||||| |||| |  ||||| || |||||||||||| ||||| ||  ||| |||| ||||||||| |||| | || |||    
T  49720362 ttataactaggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaagtat 49720461  T
Q  274 catttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
     |  ||| ||||| |||| |||||| |||||  |||| ||||||||||||||| | ||||| |||||||||    
T  49720462 -acgttttttgcagttttagtcctatctccttatttctaactccagaaacgcacataaatgacagttttag 49720531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 345
Target Start/End: Complemental strand, 50901076 - 50900913
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||||  ||||| ||  ||||| ||| | | ||||||  ||  |||| ||||||||  |||| | || ||| || ||    
T  50901076 ttaggcttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactat-atgtt 50900978  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaga 345  Q
    | ||||| |||| |||||||||||||||||| ||||||| ||||||| |||||| |||||||||||    
T  50900977 ttttgcagtttttgtcctacctcctattttc-aactccataaacgcaaagaaattgcagttttaga 50900913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 179 - 344
Target Start/End: Complemental strand, 52237367 - 52237203
Alignment:
Q  179 attaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattt 278  Q
    ||||| ||||||||||||||||||||||   ||||| || |||||||||| | ||||| ||  ||| |||| ||||||||| |||| | |||||| || |    
T  52237367 attagccttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaattat-atgt 52237269  T
Q  279 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    || ||||| |||| |||||| ||||   |||| |||||| |||||||| ||||||| |||||||||    
T  52237268 tttttgcagttttagtcctatctccctatttctaactccggaaacgcacagaaatgacagttttag 52237203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 186 - 297
Target Start/End: Original strand, 32695706 - 32695817
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||| ||||||||||| | |||||||||||| ||||||||  |  || | |||||||| |||||||||| ||||| | ||||| |||||||||||    
T  32695706 ttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgttgc 32695805  T
Q  286 atttttcgtcct 297  Q
    | |||| |||||    
T  32695806 aattttagtcct 32695817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 178 - 344
Target Start/End: Complemental strand, 52375882 - 52375717
Alignment:
Q  178 aattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatt 277  Q
    ||||||||||||||||||||||||||||||  ||||| || |||||||||| | ||||| ||  ||| |||| ||||||||| |||| | || ||| ||     
T  52375882 aattaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaattgaacaaaatcgtccataaactat-atg 52375784  T
Q  278 tttgttgcatttttcgtccta-cctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||| ||||| |||| ||| ||  | |||| |||| ||||||||||||||| ||||||| |||||||||    
T  52375783 ttttttgcagttttagtcatattccccta-tttccaactccagaaacgcacagaaatgacagttttag 52375717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 346
Target Start/End: Original strand, 49407793 - 49407957
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||||  ||||| ||  ||||||||| | ||| ||||  ||| |||||||||||||  |||| | || | | || ||    
T  49407793 ttaggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaact-ttatgtt 49407891  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |  | || |||| ||| |||||||||||||| ||||||| ||||||||||||||| || ||||||||    
T  49407892 ttgtacagttttagtcatacctcctattttc-aactccaaaaacgcagagaaatgacaattttagac 49407957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 288 - 346
Target Start/End: Original strand, 55192222 - 55192279
Alignment:
Q  288 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  55192222 ttttagtcctacctcctattttcaa-ctccagaaacgcagagaaatgacagttttagac 55192279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 344
Target Start/End: Original strand, 47431694 - 47431857
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||    ||||| || |||||||||| | ||| | ||  ||| |||| ||||||||| ||| || || |||   ||||    
T  47431694 taggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctttaaactatatgtttt 47431793  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
     ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||| |||||||||    
T  47431794 tttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttag 47431857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 186 - 344
Target Start/End: Original strand, 22370599 - 22370757
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||||||||||||||||  ||||| || |||||||||| | ||||| || |||| |||   |||||||| |||| | || |||   |||| ||||    
T  22370599 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactatatgtttttttgc 22370698  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | |||| |||||| |||||  | || ||||||||||||||| ||||||  |||||||||    
T  22370699 agttttagtcctatctccttatctccaactccagaaacgcacagaaataacagttttag 22370757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 276 - 346
Target Start/End: Original strand, 37075781 - 37075850
Alignment:
Q  276 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||| ||||| |||| |||||||||| ||||||||| ||||||||||||||||||||| | |||||||||    
T  37075781 ttttttttgcagttttagtcctacctcttattttcaa-ctccagaaacgcagagaaatgaccgttttagac 37075850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 183 - 344
Target Start/End: Original strand, 40275093 - 40275255
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattat-catttttg 281  Q
    ||||||||||||||||||||||||   ||||| || |||||||||| | ||||| ||  ||| |||| ||||||||| |||| | || | |   |||||     
T  40275093 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaattgtccctaaactctatgtttttt 40275192  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||| |||||||||    
T  40275193 ttgcagttttagtcctatctccatatttctaactccagaaacgcacagaaatgacagttttag 40275255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 183 - 344
Target Start/End: Complemental strand, 50662958 - 50662798
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||| ||||||||||||    ||||| |  |||||||||| ||||| |  | |||| |||| ||||||||| |||||| || ||| || ||| |    
T  50662958 ggcttaattatacttttggtcctaccattttgacaaactcacgaaaatagtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 50662860  T
Q  283 tgcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    |||| |||| |||||| |||| ||||||||| ||||||||||||| ||||||| |||||||||    
T  50662859 tgcagttttagtcctagctccctattttcaa-ctccagaaacgcacagaaatgacagttttag 50662798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 343
Target Start/End: Complemental strand, 330383 - 330223
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||| |||||||||||  ||||| || |||||||||| | ||||| || |||| ||||  |||||||| |||| | || ||| || |||     
T  330383 aggcttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccctaaactat-atgtttt 330285  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagtttta 343  Q
    ||||| |||| ||| || ||||   |||| ||||| ||||||||| ||||||| ||||||||    
T  330284 ttgcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagtttta 330223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 344
Target Start/End: Complemental strand, 14654736 - 14654577
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||||||||||||| |  ||||| || |||||||||||| |  || ||  ||| |||| ||||||||| |||| | || |   || |||     
T  14654736 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggctctacctcttttaaatcgaacaaaatcgtccgtaaact---atgtttt 14654640  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| |||| |||||| |||||  |||| ||||||||||||||| | ||||| |||||||||    
T  14654639 ttgcagttttagtcctatctccttatttccaactccagaaacgcacataaatgacagttttag 14654577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 184 - 346
Target Start/End: Complemental strand, 49408326 - 49408167
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcat-ttttgt 282  Q
    ||||||||||||||||||| ||||  ||||| ||  ||||||||| | ||  || |  ||| |||| ||||||||  |||||  || |||||| |||| |    
T  49408326 gcttaattacacttttggtactcgcattttgaccatctcacgaaaatggttgtgtctctttcaaatcgaacaaaactgtccta-aactatcatgtttttt 49408228  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||| |||| ||||||||||  |||||||| ||||||||||||| |||||||||||||||||||    
T  49408227 tgcagttttagtcctacctc--attttcaa-ctccagaaacgcaaagaaatggcagttttagac 49408167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 8873784 - 8873850
Alignment:
Q  277 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    |||| ||||| |||| ||| |||||||||||||||| || |||||||||||||||||| |||||||||    
T  8873784 tttttttgcagttttagtcttacctcctattttcaa-cttcagaaacgcagagaaatgacagttttag 8873850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 25534889 - 25535051
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggt-ccttcaattatcattttt 280  Q
    ||||||||||||||||||||||||||  ||||| || | ||| |||| | ||||| ||  ||| |||| ||||||||| || || | |||||| || |||    
T  25534889 aggcttaattacacttttggtcctcgcattttgaccaattcatgaaaatggtcctacctcttttaaatcgaacaaaatcgtcccctaaattat-atgttt 25534987  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
     ||||| |||| |||||| ||||   |||| ||||||||||||||| | ||||| |||||||||    
T  25534988 tttgcagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttag 25535051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 344
Target Start/End: Complemental strand, 44677015 - 44676858
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||||||||||||||    ||||| || |||||||||| | ||| |  | |||| |||| ||||||||| |||||| || ||| || ||| ||||    
T  44677015 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 44676917  T
Q  286 atttttcgtcctacctc-ctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | |||| |||||| ||| |||||||||| ||||||||||||| | ||||| |||||||||    
T  44676916 aattttagtcctatctctctattttcaa-ctccagaaacgcacataaatgacagttttag 44676858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 344
Target Start/End: Complemental strand, 40839195 - 40839038
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    |||||||||||||||||||||   ||||| |  |||||||||| | ||| | ||  ||| |||| ||||||||| |||| | || ||| || ||| ||||    
T  40839195 ttaattacacttttggtcctcacattttgacaaactcacgaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactat-atgttttttgc 40839097  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | |||| |||||| ||||   |||| ||||||||||||||| ||||||| |||||||||    
T  40839096 agttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttag 40839038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 344
Target Start/End: Complemental strand, 49952092 - 49951932
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||| |||||||||| |  ||||| || |||||||||||| ||| | ||  ||| |||| ||||||||| ||| || || || ||| ||| |    
T  49952092 ggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcgaacaaaatcgtcattaaacta-catgttttt 49951994  T
Q  283 tgcatttttcgtcctacct-cctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    |||| |||| ||| || || ||||||||| ||||||||||||||| | ||||| |||||||||    
T  49951993 tgcagttttagtcatatctccctattttc-aactccagaaacgcacataaatgacagttttag 49951932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 51828538 - 51828700
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||||||||||||||||||||| |  ||||| || | | |||||||| ||| | ||  ||| |||| ||||||||| |||| | || |||   ||||     
T  51828538 aggcttaattacacttttggtccttgcattttgaccaaattacgaaattggtcttacctcttttaaatcgaacaaaatcgtccgtaaactatatgttttt 51828637  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| | ||||| |||||||||    
T  51828638 ttgcagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttag 51828700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 344
Target Start/End: Original strand, 2323466 - 2323538
Alignment:
Q  271 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    |||||| ||| ||||| |||| |||||||||||||||||| |||||||||||| | || ||||| |||||||||    
T  2323466 tatcatgttttttgcaattttagtcctacctcctattttc-aactccagaaacacggataaatgacagttttag 2323538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 344
Target Start/End: Complemental strand, 51828504 - 51828343
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||||||||||||||     |||| || |||||||||| | ||| |    |||| |||| ||||||||| |||||| || |||   |||| |    
T  51828504 ggcttaattacacttttggtcctaccactttgaccaactcacgaaaatggtcatatattttttaaatcgaacaaaattgtccttaaactatatgtttttt 51828405  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    |||| |||| |||||| ||||   |||| ||||||||||||||| ||||||| |||||||||    
T  51828404 tgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttag 51828343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 297
Target Start/End: Original strand, 23227261 - 23227370
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||| ||||| ||||||||||   |||||||||| ||||||||||| | |||||       | ||| |||||||| | ||||| ||||| |||||||||    
T  23227261 aggctcaattagacttttggtctctgtgttttggcttactcacgaaaatggtcctc------tgaaacagaacaaatttgtcctccaattttcatttttg 23227354  T
Q  282 ttgcatttttcgtcct 297  Q
    ||||||||||||||||    
T  23227355 ttgcatttttcgtcct 23227370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 344
Target Start/End: Original strand, 38535306 - 38535469
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||    ||||| || ||||| |||| | |||||  | |||| |||| ||||||||| |||||| || ||| || ||    
T  38535306 ttaggcttaattacacttttggtcctaccattttgaccaactcaggaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgtt 38535404  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | ||||| |||  |||||| ||||   |||| ||||||| ||||||| | ||||| |||||||||    
T  38535405 ttttgcagtttcagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttag 38535469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 344
Target Start/End: Complemental strand, 32730877 - 32730775
Alignment:
Q  241 ttttaaaatagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagtt 340  Q
    |||| |||| ||||||||| |||||| || ||| || ||| ||||| ||||  ||||| ||||   |||||||||||||||||||| ||||||| |||||    
T  32730877 tttttaaattgaacaaaatcgtccttaaactat-atgttttttgcagttttaatcctatctccctatttcaaactccagaaacgcacagaaatgacagtt 32730779  T
Q  341 ttag 344  Q
    ||||    
T  32730778 ttag 32730775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 344
Target Start/End: Original strand, 41998227 - 41998390
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||    ||||| || |||| ||||| | |||||  | |||| |||| ||||||||| |||||| || |||   ||||    
T  41998227 taggcttaattacacttttggtcctaccattttgaccaactcgcgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 41998326  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
     ||||| |||| ||| || ||||   |||| ||||||| ||||| | ||||||| |||||||||    
T  41998327 tttgcagttttagtcatatctccctatttccaactccataaacgaacagaaatgacagttttag 41998390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 46013421 - 46013582
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||| |||| |  ||||| || |||||||||||| ||| | ||  ||| |||| ||||||||| |||| | || ||| || |||     
T  46013421 aggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtat-atgtttt 46013519  T
Q  282 ttgcatttttcgtcctacct-cctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| |||| ||| || || ||||||||| ||||||||||||||| | ||||| | |||||||    
T  46013520 ttgcagttttagtcatatctccctattttc-aactccagaaacgcacataaatgacggttttag 46013582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 25611491 - 25611529
Alignment:
Q  176 ataattaggcttaattacacttttggtcctcgtgttttg 214  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  25611491 ataataaggcttaattacacttttgatcctcgtgttttg 25611529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 41998775 - 41998693
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtcc 264  Q
    |||||||||||||||||||||||| |  ||||| || ||| |||||||| ||||| ||  ||| |||| ||||||||| ||||    
T  41998775 aggcttaattacacttttggtccttgcattttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtcc 41998693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 344
Target Start/End: Original strand, 49951549 - 49951706
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||||||||||||||    ||||| || |||||||||| | |||||  | |||| |||| ||||||||| |||||| || ||| || ||| ||||    
T  49951549 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 49951647  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | |||| |||||| ||||   |||| ||||||| ||||||| | ||||  |||||||||    
T  49951648 aattttagtcctatctccctatttccaactccataaacgcacataaataacagttttag 49951706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 51472854 - 51473015
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||| |||||||||||| |  ||||| || ||||| ||||||  |||| ||  ||| ||||  |||||||| |||| | || ||| || |||     
T  51472854 aggcttaattatacttttggtccttgcattttgaccaactcatgaaatttttcctacctcttttaaatcaaacaaaattgtccctaaagtat-atgtttt 51472952  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    ||||| |||| |||||| ||||   |||| ||||||| ||||||| ||||||| |||||||||    
T  51472953 ttgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttag 51473015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 344
Target Start/End: Complemental strand, 51473399 - 51473241
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||||||||| ||||    ||||| || |||||||||| | |||||  | |||| |||| ||||||||| |||||| || |||   |||| ||||    
T  51473399 ttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 51473300  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    | |||| |||||| ||||   |||| ||||||| ||||||| | ||||| |||||||||    
T  51473299 agttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttag 51473241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 344
Target Start/End: Original strand, 43222390 - 43222550
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    |||||||||||  |||||||| ||   ||||| || |||||||||| ||||  || |  ||| |||| ||||||||| |||| | || ||| || ||| |    
T  43222390 ggcttaattacgtttttggtcatcacattttgaccaactcacgaaaatagttatgtctcttttaaatcgaacaaaatcgtccctaaactat-atgttttt 43222488  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 344  Q
    |||||||||  ||||||| ||||||||  ||||||||||||| | | ||||| |||||||||    
T  43222489 tgcatttttaatcctaccccctatttttcaactccagaaacgtacaaaaatgacagttttag 43222550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 346
Target Start/End: Complemental strand, 37847267 - 37847204
Alignment:
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||| |||| |||||| ||||||||||||| || |||||| ||||||||||| || ||||||||    
T  37847267 ttgcagttttagtcctatctcctattttcaa-cttcagaaatgcagagaaatgacaattttagac 37847204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 40275645 - 40275593
Alignment:
Q  177 taattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaat 229  Q
    ||||| ||||||||||||||||||||||||   ||||| || |||||||||||    
T  40275645 taatttggcttaattacacttttggtcctcacattttgaccaactcacgaaat 40275593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 49720908 - 49720824
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtcctt 266  Q
    ||||||||||||||||||||||||  | ||||| || |||||||||| | ||| |  | |||| |||| ||||||||| ||||||    
T  49720908 aggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtcctt 49720824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 148; Significance: 5e-78; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 180 - 367
Target Start/End: Complemental strand, 2215 - 2028
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| ||||||||| |||| |||||||||||||||    
T  2215 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 2116  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatg 367  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||| |||||||||||    
T  2115 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttaggcggttttagacctacccctatg 2028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 181 - 346
Target Start/End: Original strand, 1665 - 1829
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  1665 taggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcattttt 1764  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  1765 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 1829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 140; Significance: 3e-73; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 183 - 362
Target Start/End: Complemental strand, 11168 - 10989
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| | ||||||| |||||||||||||||||||||||    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 11069  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 362  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||| ||||||    
T  11068 tgcatttttcgtcctacctcctattttcaaactcgagaaacgcagagaaattgcagttttaggcggttttagacctaccc 10989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 202 - 347
Target Start/End: Original strand, 10640 - 10784
Alignment:
Q  202 tcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacct 301  Q
    |||||||||||||||||||||| |||| | ||||||||||||||||| ||||||||| |||||||||| ||||||||| ||||||||||||||||||||     
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccc 10739  T
Q  302 cctattttcaaactccagaaacgcagagaaatggcagttttagacg 347  Q
     | ||||| |  ||||| ||| ||||||||||| ||||||||||||    
T  10740 tccatttt-attctccaaaaatgcagagaaatgacagttttagacg 10784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 128; Significance: 4e-66; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 183 - 346
Target Start/End: Complemental strand, 1286 - 1123
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 282  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  1286 ggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 1187  T
Q  283 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  1186 tgcatctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttagac 1123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 185 - 346
Target Start/End: Original strand, 755 - 914
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    ||||||||||||||||||| |||||||||||||||||||||| | | ||||||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttgttg 853  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||  |||||||||||    
T  854 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttagac 914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 120; Significance: 3e-61; HSPs: 6)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 186 - 369
Target Start/End: Complemental strand, 64847 - 64664
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||||||||||||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| ||||||| ||||||||||||||||||    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 64748  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||| || |||||||||||||||||||||| ||| ||||  ||||||||| |||||||||| ||||| |||||||    
T  64747 atttttcgtcctatcttctattttcaaactccagaaacggagaaaaataacagttttaggcggttttagacctacctctatgct 64664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 182 - 346
Target Start/End: Original strand, 64301 - 64464
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||| |  ||||| |||||||||| ||||||||| ||||||||||||||||||||||    
T  64301 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttttg 64400  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||| |||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  64401 ttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 64464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 185 - 346
Target Start/End: Complemental strand, 205911 - 205752
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    ||||||||||||||| ||||||   ||||| || |||||||||| | ||||||||  ||| |||| ||||||||  |||| | || |||||| ||| |||    
T  205911 cttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttt-ttg 205813  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    || |||| ||||||| |||||||||||| ||||| |||||||||||||||||||||||||||    
T  205812 cagttttagtcctacgtcctattttcaa-ctccaaaaacgcagagaaatggcagttttagac 205752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 205038 - 205112
Alignment:
Q  271 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||| |||||| ||||||||||| ||||||||||    
T  205038 tatcatgttttttgcagttttagtcctacctcctattttc-aactctagaaacacagagaaatggaagttttagac 205112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 205468 - 205541
Alignment:
Q  271 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||| ||| | |||| |||| ||||||||||||||| ||| |||| | ||||||||||||||||||||||    
T  205468 tatcattttt-ttgtagttttagtccaacctcctattttcaa-ctctagaatcacagagaaatggcagttttagac 205541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 210884 - 210786
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||   ||||| || ||||| |||| | ||||||||  ||| |||| ||||||||  |||| | || ||||||||||    
T  210884 aggcttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcattttt 210786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 114; Significance: 1e-57; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 177 - 346
Target Start/End: Original strand, 4787 - 4955
Alignment:
Q  177 taattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcat 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| ||||||||| |||||||||||||||||    
T  4787 taattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat 4886  T
Q  277 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||  |||||||||||    
T  4887 ttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttagac 4955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 185 - 355
Target Start/End: Complemental strand, 5334 - 5168
Alignment:
Q  185 cttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttg 284  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | ||| || |||||||||| |||| |||| |||  ||||||||||||||||||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttg 5235  T
Q  285 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttaga 355  Q
    ||||||||||    |||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||    
T  5234 catttttcgt----cctcctattttcaaactccagaaacgcagaaaaatgacagttttaggcggttttaga 5168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 114; Significance: 1e-57; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 200 - 369
Target Start/End: Complemental strand, 17024 - 16855
Alignment:
Q  200 ggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctac 299  Q
    ||||||||||||||| | ||||||||||| |  ||| ||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 16925  T
Q  300 ctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| || ||||||| |||||||||||||    
T  16924 ctcctattttcaaactccagaaacgcagagaaattacagttttaggcgattttagacctacccctatgct 16855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 346
Target Start/End: Original strand, 16564 - 16658
Alignment:
Q  251 gaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||| |||||||||| ||||||||||||||||||||||||| |||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 16658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 180 - 346
Target Start/End: Complemental strand, 134221 - 134056
Alignment:
Q  180 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| | ||||||||| | ||||||||||| ||||||    
T  134221 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacatttt 134122  T
Q  280 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  134121 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 134056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 181 - 346
Target Start/End: Complemental strand, 4754 - 4590
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||| | ||||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  4754 taggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcattttt 4655  T
Q  281 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||||||||||||||||| || ||||| |  ||||| |||| |||||||||| |||||||||||    
T  4654 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttagac 4590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 222 - 369
Target Start/End: Original strand, 4242 - 4389
Alignment:
Q  222 cacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaa 321  Q
    ||||||| | ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  322 acgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    | ||||||||||| ||||||||| |||||||||| |||||||||||||    
T  4342 atgcagagaaatgacagttttaggcggttttagacctacccctatgct 4389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 101; Significance: 6e-50; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 186 - 346
Target Start/End: Original strand, 42172 - 42332
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    |||||||||||||| || |||||||||||| ||| |||||||| |  ||||||| |||||||| ||||||||| |||| |||||||||||||||||||||    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 42271  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  42272 attttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttagac 42332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 173 - 346
Target Start/End: Complemental strand, 42713 - 42542
Alignment:
Q  173 tttataattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaatta 272  Q
    |||||| ||||||||||||| |||||||| ||||||||||||| ||||||| |||| |  | |||||||||||||| ||||||||| ||||||||| |||    
T  42713 tttatatttaggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagtta 42614  T
Q  273 tcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||| |||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  42613 tcatttttgtttcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttagac 42542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 186 - 369
Target Start/End: Original strand, 9935 - 10116
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||| |||||||||||||||||| ||||| |||||||| |  || ||||||||||| |||||||||||||||||||||||||||| ||||||| |    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgttac 10034  T
Q  286 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccctatgct 369  Q
    | ||||| ||||||||||||||||||||||| ||||||| ||||||||| || |||||| |||||||| |  ||||||||||||    
T  10035 a-ttttcatcctacctcctattttcaaactcaagaaacg-agagaaatgacaattttaggcggttttaaacatacccctatgct 10116  T

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Target: scaffold0432; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 186 - 300
Target Start/End: Complemental strand, 10414 - 10300
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    |||||||||||||||||||||||||||||| |||||||||||| | ||  | ||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  286 atttttcgtcctacc 300  Q
    |||||||||||||||    
T  10314 atttttcgtcctacc 10300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 183 - 280
Target Start/End: Complemental strand, 19166 - 19069
Alignment:
Q  183 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  19166 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 182 - 346
Target Start/End: Original strand, 18834 - 18996
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||| | ||| ||||||||||||| | ||||||| ||| ||||||||||||||||||    
T  18834 aggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttttg 18933  T
Q  282 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttagac 346  Q
    ||||||||||| ||||||| || ||||| |  ||||| ||||||||||||||  |||||||||||    
T  18934 ttgcatttttcatcctacc-cccatttt-attctccaaaaacgcagagaaataacagttttagac 18996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 308
Target Start/End: Original strand, 568 - 692
Alignment:
Q  184 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgtt 283  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |  || ||||||||||||| |||||||||  |||||||||||||||||||||||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgtt 667  T
Q  284 gcatttttcgtcctacctcctattt 308  Q
    | ||||||||||  |||||| ||||    
T  668 gtatttttcgtctcacctcccattt 692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 182 - 297
Target Start/End: Complemental strand, 28789 - 28674
Alignment:
Q  182 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 281  Q
    |||| ||||||||||||||||| ||||||||||||||||| |||||| | ||| ||||||||||||| ||||||||| |||| |||||||||||||||||    
T  28789 aggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 28690  T
Q  282 ttgcatttttcgtcct 297  Q
    ||||| ||||||||||    
T  28689 ttgcagttttcgtcct 28674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 186 - 309
Target Start/End: Complemental strand, 62000 - 61877
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    ||||||||||||||| |||||||||||||| |||||||||||| | ||||| ||||||||||||||||||||||  || ||||| |||||||||||||      
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  286 atttttcgtcctacctcctatttt 309  Q
    ||||||||||||||| || |||||    
T  61900 atttttcgtcctaccccccatttt 61877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 61026 - 61102
Alignment:
Q  181 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaa 257  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||| |  ||||||| |||||||||||||||||    
T  61026 taggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 187 - 299
Target Start/End: Original strand, 454 - 565
Alignment:
Q  187 taattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgca 286  Q
    |||||||| |||||||| |||||||||||||||||||||||| | ||| ||  ||||||||| | |||| ||| ||||||||||||||||||||||||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  287 tttttcgtcctac 299  Q
    |||||||||||||    
T  553 tttttcgtcctac 565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 186 - 286
Target Start/End: Complemental strand, 8551 - 8451
Alignment:
Q  186 ttaattacacttttggtcctcgtgttttggcctactcacgaaattagtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 285  Q
    |||||||||||||||||| || |||||||| ||||| |||||| | ||||| ||||||||||| | | ||||| ||||||||||||||||||||||||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttgc 8452  T
Q  286 a 286  Q
    |    
T  8451 a 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 309
Target Start/End: Complemental strand, 7784 - 7707
Alignment:
Q  232 gtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgcatttttcgtcctacctcctatttt 309  Q
    ||||| ||||||||||| |||||||||  ||| |||| ||||||||||||||||||||||||||||||| ||||||||    
T  7784 gtccttcccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctatttt 7707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1339 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 208
Target Start/End: Complemental strand, 65 - 30
Alignment:
Q  173 tttataattaggcttaattacacttttggtcctcgt 208  Q
    ||||| ||||||||||||||||||||||||||||||    
T  65 tttattattaggcttaattacacttttggtcctcgt 30  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0830 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0830
Description:

Target: scaffold0830; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 208
Target Start/End: Complemental strand, 5387 - 5352
Alignment:
Q  173 tttataattaggcttaattacacttttggtcctcgt 208  Q
    ||||| ||||||||||||||||||||||||||||||    
T  5387 tttattattaggcttaattacacttttggtcctcgt 5352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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