View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18052_low_6 (Length: 313)

Name: NF18052_low_6
Description: NF18052
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18052_low_6
NF18052_low_6
[»] chr3 (18 HSPs)
chr3 (18-274)||(44432856-44433111)
chr3 (214-274)||(35359241-35359301)
chr3 (215-270)||(3193042-3193097)
chr3 (216-267)||(17773169-17773220)
chr3 (216-267)||(19074470-19074521)
chr3 (216-270)||(28712722-28712776)
chr3 (214-274)||(38958099-38958160)
chr3 (214-270)||(51315745-51315801)
chr3 (215-270)||(28204478-28204533)
chr3 (216-266)||(14340732-14340782)
chr3 (215-265)||(25154447-25154497)
chr3 (215-256)||(14349383-14349424)
chr3 (214-267)||(36677521-36677574)
chr3 (214-267)||(36687603-36687656)
chr3 (214-270)||(4474328-4474384)
chr3 (217-265)||(14856546-14856594)
chr3 (214-270)||(46226948-46227004)
chr3 (214-266)||(48348252-48348304)
[»] chr2 (13 HSPs)
chr2 (214-274)||(14489467-14489527)
chr2 (217-270)||(34679351-34679404)
chr2 (216-270)||(21358366-21358420)
chr2 (217-270)||(16043286-16043339)
chr2 (215-270)||(5362173-5362228)
chr2 (217-268)||(18709247-18709298)
chr2 (215-270)||(19206140-19206195)
chr2 (215-250)||(32969808-32969843)
chr2 (220-274)||(2609081-2609135)
chr2 (217-270)||(15023099-15023152)
chr2 (214-270)||(20650715-20650770)
chr2 (214-270)||(31827522-31827578)
chr2 (220-268)||(37431800-37431848)
[»] chr7 (17 HSPs)
chr7 (216-271)||(17876417-17876472)
chr7 (216-270)||(4049982-4050036)
chr7 (216-268)||(14247293-14247345)
chr7 (216-270)||(28350115-28350169)
chr7 (217-274)||(36580274-36580332)
chr7 (216-265)||(15348224-15348273)
chr7 (214-271)||(23826282-23826339)
chr7 (214-274)||(19645058-19645118)
chr7 (214-274)||(28786014-28786074)
chr7 (219-270)||(8074136-8074187)
chr7 (217-256)||(21748089-21748128)
chr7 (220-271)||(48058864-48058915)
chr7 (216-274)||(11373846-11373904)
chr7 (216-270)||(28785755-28785809)
chr7 (217-270)||(20505270-20505323)
chr7 (218-270)||(3247432-3247484)
chr7 (214-270)||(21939335-21939391)
[»] chr6 (11 HSPs)
chr6 (216-270)||(12766475-12766529)
chr6 (214-265)||(28011390-28011441)
chr6 (217-267)||(33401317-33401367)
chr6 (214-265)||(238927-238978)
chr6 (215-270)||(3579593-3579648)
chr6 (220-274)||(1377463-1377517)
chr6 (220-274)||(1385211-1385265)
chr6 (214-270)||(2853677-2853733)
chr6 (214-266)||(10727187-10727239)
chr6 (214-270)||(10727455-10727511)
chr6 (224-268)||(18030944-18030988)
[»] chr4 (18 HSPs)
chr4 (216-270)||(35383764-35383818)
chr4 (214-266)||(35393934-35393986)
chr4 (216-274)||(19909172-19909230)
chr4 (220-270)||(14449276-14449326)
chr4 (216-270)||(25909486-25909540)
chr4 (216-274)||(29697778-29697836)
chr4 (216-270)||(43074615-43074669)
chr4 (217-270)||(49185571-49185623)
chr4 (216-265)||(53312551-53312600)
chr4 (214-271)||(53924744-53924801)
chr4 (215-274)||(6207433-6207492)
chr4 (215-266)||(11824186-11824237)
chr4 (216-271)||(23759560-23759615)
chr4 (219-270)||(49185820-49185870)
chr4 (214-268)||(1571669-1571723)
chr4 (216-270)||(12719707-12719761)
chr4 (214-243)||(30627061-30627090)
chr4 (217-270)||(50769622-50769675)
[»] chr5 (11 HSPs)
chr5 (218-271)||(32391720-32391773)
chr5 (214-270)||(2974895-2974951)
chr5 (216-274)||(20512456-20512514)
chr5 (214-270)||(12406038-12406094)
chr5 (218-250)||(35877560-35877592)
chr5 (220-270)||(3999089-3999139)
chr5 (220-270)||(25364086-25364136)
chr5 (219-269)||(25910987-25911037)
chr5 (214-274)||(35166548-35166610)
chr5 (218-267)||(39574240-39574289)
chr5 (214-270)||(25910718-25910773)
[»] chr1 (9 HSPs)
chr1 (216-269)||(39642199-39642252)
chr1 (214-274)||(25085396-25085456)
chr1 (219-270)||(23891662-23891713)
chr1 (217-270)||(3377772-3377825)
chr1 (214-256)||(25486487-25486529)
chr1 (219-268)||(18632602-18632651)
chr1 (218-270)||(5287835-5287887)
chr1 (214-266)||(23220826-23220878)
chr1 (214-270)||(45738933-45738989)
[»] scaffold1458 (1 HSPs)
scaffold1458 (215-270)||(1469-1524)
[»] chr8 (10 HSPs)
chr8 (216-270)||(17070906-17070960)
chr8 (216-270)||(17577312-17577366)
chr8 (216-270)||(37813161-37813215)
chr8 (215-256)||(16982624-16982665)
chr8 (216-256)||(521717-521757)
chr8 (215-274)||(23702121-23702181)
chr8 (217-270)||(36688258-36688311)
chr8 (214-271)||(39889769-39889826)
chr8 (222-270)||(22192307-22192355)
chr8 (218-270)||(33298594-33298646)
[»] scaffold0515 (1 HSPs)
scaffold0515 (215-270)||(3637-3692)
[»] scaffold0306 (1 HSPs)
scaffold0306 (215-270)||(3637-3692)
[»] scaffold0417 (1 HSPs)
scaffold0417 (215-265)||(9603-9653)
[»] scaffold0725 (1 HSPs)
scaffold0725 (214-274)||(6688-6748)
[»] scaffold0137 (1 HSPs)
scaffold0137 (218-274)||(19915-19971)
[»] scaffold0062 (1 HSPs)
scaffold0062 (216-256)||(46075-46115)
[»] scaffold0025 (1 HSPs)
scaffold0025 (215-263)||(19038-19086)


Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 18 - 274
Target Start/End: Original strand, 44432856 - 44433111
Alignment:
Q  18 gttaatttgttttgtggttcaggatgttgctactagagttgtggctgagggattgtcaccggatgagacacatgtctccaaagttatgacacggaatcct 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44432856 gttaatttgttttgtggttcaggatgttgctactagagttgtggctgagggattgtcaccggatgagacacatgtctccaaagttatgacacggaatcct 44432955  T
Q  118 atttttgttacatctgatacactcgccattgatgctcttcagaagatgattcagggttagttagttgttattaatgttttctttgtttcacctttcttag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44432956 atttttgttacatctgatacactcgccattgatgctcttcagaagatgattcagggttagttagttgttattaatgttttctttgtttcacctttcttag 44433055  T
Q  218 gcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccctaag 274  Q
    ||||||||||| |||||| |||||||||||||| ||||| |||||||||| ||||||    
T  44433056 gcttaatagcaattttca-cccctaactttcacgaagttgtgattttggctcctaag 44433111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 35359301 - 35359241
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccctaag 274  Q
    ||||||||||||| ||||||||||| ||||||||||| ||||| | |||||||||||||||    
T  35359301 ttaggcttaatagtagttttcaccctctaactttcacgaagttgtaattttggcccctaag 35359241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 270
Target Start/End: Complemental strand, 3193097 - 3193042
Alignment:
Q  215 taggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||||||||||||||||||||||||||||||  |||||  ||||||| ||||    
T  3193097 taggcttaatagcagttttcaccccctaactttcaagaagttgcgattttgacccc 3193042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 17773169 - 17773220
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggc 267  Q
    ||||||||||||||||||| ||||||||||||||| |||||  |||||||||    
T  17773169 aggcttaatagcagttttcgccccctaactttcactaagttgcgattttggc 17773220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 19074470 - 19074521
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggc 267  Q
    ||||||||||||||||||| ||||||||||||||| |||||  |||||||||    
T  19074470 aggcttaatagcagttttcgccccctaactttcactaagttgcgattttggc 19074521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 28712776 - 28712722
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||||||||| |||||||||||| |  ||||| |||||||||||||    
T  28712776 aggcttaatagcagttttcgccccctaacttttatgaagttgtgattttggcccc 28712722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 38958160 - 38958099
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttg-gcccctaag 274  Q
    ||||||||||||||||||||| ||||||||||||||| || ||  ||||||| |||||||||    
T  38958160 ttaggcttaatagcagttttcgccccctaactttcacgaaattacgattttgagcccctaag 38958099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 51315801 - 51315745
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||||||||||  ||||||||||||| | |||||  ||||||||||||    
T  51315801 ttaggcttaatagcagttttagccccctaactttcccaaagttgcgattttggcccc 51315745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 28204478 - 28204533
Alignment:
Q  215 taggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||||||||||||||| |||| |||||||||| |||||  ||||||| ||||    
T  28204478 taggcttaatagcagttttcgccccttaactttcacgaagttgcgattttgacccc 28204533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 14340732 - 14340782
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttgg 266  Q
    ||||||||||| ||||||| ||||||||||||||| |||||  ||||||||    
T  14340732 aggcttaataggagttttcgccccctaactttcacgaagttacgattttgg 14340782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 25154497 - 25154447
Alignment:
Q  215 taggcttaatagcagttttcaccccctaactttcaccaagttctgattttg 265  Q
    ||||||||||||||||||| |||||||||||||  | ||||| ||||||||    
T  25154497 taggcttaatagcagttttaaccccctaactttaccaaagttgtgattttg 25154447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 14349424 - 14349383
Alignment:
Q  215 taggcttaatagcagttttcaccccctaactttcaccaagtt 256  Q
    |||||||||||||||||||| |||||||||||| || |||||    
T  14349424 taggcttaatagcagttttcgccccctaacttttacgaagtt 14349383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 36677521 - 36677574
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggc 267  Q
    |||||||||||| |||||||| ||| ||||||||||| |||||  |||||||||    
T  36677521 ttaggcttaataacagttttcgcccgctaactttcacgaagttgcgattttggc 36677574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 36687603 - 36687656
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggc 267  Q
    |||||||||||| |||||||| ||| ||||||||||| |||||  |||||||||    
T  36687603 ttaggcttaataacagttttcgcccgctaactttcacgaagttgcgattttggc 36687656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 4474384 - 4474328
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||| ||||||||||||||| || ||||||||| || |||||  ||||||||||||    
T  4474384 ttaggtttaatagcagttttctcctcctaacttttacgaagttgcgattttggcccc 4474328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 14856546 - 14856594
Alignment:
Q  217 ggcttaatagcagttttcaccccctaactttcaccaagttctgattttg 265  Q
    |||||||||||||||||| | ||||||||||||| |||||  |||||||    
T  14856546 ggcttaatagcagttttcgcaccctaactttcacgaagttgcgattttg 14856594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 46227004 - 46226948
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||| |||||||||||||||  |||||||||||||| |||||  ||||||| ||||    
T  46227004 ttaggattaatagcagttttcgtcccctaactttcacgaagttgcgattttgacccc 46226948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 48348252 - 48348304
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttgg 266  Q
    |||| |||||||||||||||| |||||||||||| || |||||  ||||||||    
T  48348252 ttagacttaatagcagttttcgccccctaacttttacgaagttgcgattttgg 48348304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 14489527 - 14489467
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccctaag 274  Q
    ||||||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||||    
T  14489527 ttaggcttaatagcagttttcgccccctaactttcacgaagttgcgattttggcccctaag 14489467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 34679404 - 34679351
Alignment:
Q  217 ggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||||||||||||  ||||||||||||||| ||||| |||||||||||||    
T  34679404 ggcttaatagcagtttttgccccctaactttcacgaagttgtgattttggcccc 34679351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 21358420 - 21358366
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||||||||  ||||||||||||| | ||||| |||||||||||||    
T  21358420 aggcttaatagcagtttttgccccctaactttctcaaagttgtgattttggcccc 21358366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 16043339 - 16043286
Alignment:
Q  217 ggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||| |||||||||| ||||||||||||||| |||||  ||||||||||||    
T  16043339 ggcttaacagcagttttcgccccctaactttcacgaagttacgattttggcccc 16043286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 5362173 - 5362228
Alignment:
Q  215 taggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||||||| | ||||| ||||||||||||||| |||||  ||||||||||||    
T  5362173 taggcttaatagtaattttcgccccctaactttcacaaagttgcgattttggcccc 5362228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 18709247 - 18709298
Alignment:
Q  217 ggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcc 268  Q
    ||||||||||||||||||  |||||||||||||| |||||  ||||||||||    
T  18709247 ggcttaatagcagttttcgtcccctaactttcacgaagtttcgattttggcc 18709298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 19206140 - 19206195
Alignment:
Q  215 taggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||||||||| ||||| |||||||| |||||| |||||  ||||||||||||    
T  19206140 taggcttaatagcaattttcgccccctaattttcacaaagttgcgattttggcccc 19206195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 32969843 - 32969808
Alignment:
Q  215 taggcttaatagcagttttcaccccctaactttcac 250  Q
    |||||||||||||||||||| |||||||||||||||    
T  32969843 taggcttaatagcagttttcgccccctaactttcac 32969808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 274
Target Start/End: Original strand, 2609081 - 2609135
Alignment:
Q  220 ttaatagcagttttcaccccctaactttcaccaagttctgattttggcccctaag 274  Q
    ||||||| ||||||| |||||||||||| || ||||| ||||||||||| |||||    
T  2609081 ttaatagtagttttcgccccctaacttttacgaagttttgattttggcctctaag 2609135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 15023152 - 15023099
Alignment:
Q  217 ggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||||||||||||  ||||||||||||||  ||||| |||||||| ||||    
T  15023152 ggcttaatagcagttttggccccctaactttcaagaagttgtgattttgacccc 15023099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 20650770 - 20650715
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||||||||||||||| ||||||||| |||||  || ||| ||||||||||||    
T  20650770 ttaggcttaatagcagtttt-accccctaagtttcaagaaattcagattttggcccc 20650715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 31827522 - 31827578
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||||||||||||||| || ||||||||||  | ||||| |||||||| ||||    
T  31827522 ttaggcttaatagcagttttaactccctaacttttccaaagttgtgattttgccccc 31827578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 37431848 - 37431800
Alignment:
Q  220 ttaatagcagttttcaccccctaactttcaccaagttctgattttggcc 268  Q
    ||||||||||||||| ||||||||||| ||| |||||  ||||||||||    
T  37431848 ttaatagcagttttcgccccctaacttccacgaagttgcgattttggcc 37431800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 216 - 271
Target Start/End: Complemental strand, 17876472 - 17876417
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccct 271  Q
    ||||||||||||||||||||||||||||||||||| |||||  |||||||||||||    
T  17876472 aggcttaatagcagttttcaccccctaactttcacgaagttacgattttggcccct 17876417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 4050036 - 4049982
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||||||||| |||| |||||||||| ||||| |||||||||||||    
T  4050036 aggcttaatagcagttttcgccccttaactttcacgaagttgtgattttggcccc 4049982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 14247293 - 14247345
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcc 268  Q
    ||||||||||||||||||| || |||||||||||| ||||| |||||||||||    
T  14247293 aggcttaatagcagttttcgccacctaactttcacgaagttgtgattttggcc 14247345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 28350115 - 28350169
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||||||||  ||||||||||||||| |||||  ||||||||||||    
T  28350115 aggcttaatagcagttttagccccctaactttcacgaagttacgattttggcccc 28350169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 36580274 - 36580332
Alignment:
Q  217 ggcttaatagcagttttcaccccctaactttcaccaagttctgattttgg-cccctaag 274  Q
    ||||||||||||||||||  |||||||||||||| ||||| ||||||||| ||||||||    
T  36580274 ggcttaatagcagttttcggcccctaactttcacgaagttgtgattttggtcccctaag 36580332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 265
Target Start/End: Complemental strand, 15348273 - 15348224
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttg 265  Q
    ||||||||||||||| ||||||||||||||||||| |||||  |||||||    
T  15348273 aggcttaatagcagtattcaccccctaactttcacgaagttgcgattttg 15348224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 23826339 - 23826282
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccct 271  Q
    ||||||||||||||||||||   |||||||||||||| |||||  |||||||||||||    
T  23826339 ttaggcttaatagcagtttttgtcccctaactttcacgaagttgcgattttggcccct 23826282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 19645118 - 19645058
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccctaag 274  Q
    ||||| ||||||||| ||||| |||| |||||||||| |||||  ||||||||||||||||    
T  19645118 ttaggtttaatagcaattttcgccccttaactttcacgaagttgcgattttggcccctaag 19645058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 28786074 - 28786014
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccctaag 274  Q
    |||||||||||||||||||| ||||| |||||||  | ||||| |||||||||||| ||||    
T  28786074 ttaggcttaatagcagttttaaccccataacttttccaaagttgtgattttggcccttaag 28786014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 8074187 - 8074136
Alignment:
Q  219 cttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||||||||||| ||||||||||||||| |||||  |||||| |||||    
T  8074187 cttaatagcagttttcgccccctaactttcacgaagttacgattttagcccc 8074136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 21748128 - 21748089
Alignment:
Q  217 ggcttaatagcagttttcaccccctaactttcaccaagtt 256  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  21748128 ggcttaatagcagttttcgccccctaactttcacgaagtt 21748089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 48058864 - 48058915
Alignment:
Q  220 ttaatagcagttttcaccccctaactttcaccaagttctgattttggcccct 271  Q
    |||||||||||||| ||||||||| ||||| ||||||  |||||||||||||    
T  48058864 ttaatagcagttttaaccccctaagtttcaacaagttgagattttggcccct 48058915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 274
Target Start/End: Original strand, 11373846 - 11373904
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccctaag 274  Q
    ||||||||||||||||||| |||||||||||| || |||||  ||| ||| ||||||||    
T  11373846 aggcttaatagcagttttcgccccctaacttttacgaagttgcgatcttgacccctaag 11373904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 28785755 - 28785809
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||| |||||||||||| | ||||||||||||||| |||||  ||||||||||||    
T  28785755 aggcataatagcagtttccgccccctaactttcacgaagttacgattttggcccc 28785809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 20505323 - 20505270
Alignment:
Q  217 ggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||||||||||||||||||||| |||| |  |||||  ||||||||||||    
T  20505323 ggcttaatagcagttttcaccccctagcttttatgaagttgcgattttggcccc 20505270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 3247484 - 3247432
Alignment:
Q  218 gcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||| || |||||  |||||||||||||| ||||| |||||||||||||    
T  3247484 gcttaataacaattttcgtcccctaactttcacgaagttgtgattttggcccc 3247432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 21939391 - 21939335
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||||||||||  |||||||| | |||| |||||  ||||||||||||    
T  21939391 ttaggcttaatagcagttttggccccctaagtatcacgaagttgcgattttggcccc 21939335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 12766529 - 12766475
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  12766529 aggcttaatagcagttttcaccccctaactttcacgaagttgcgattttggcccc 12766475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 28011441 - 28011390
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttg 265  Q
    |||| |||||||||||||||||||||||||||||||| |||||  |||||||    
T  28011441 ttagccttaatagcagttttcaccccctaactttcacgaagttgcgattttg 28011390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 33401367 - 33401317
Alignment:
Q  217 ggcttaatagcagttttcaccccctaactttcaccaagttctgattttggc 267  Q
    ||||||||||||||||||||||||||||||| || |||||  |||||||||    
T  33401367 ggcttaatagcagttttcaccccctaacttttacgaagttacgattttggc 33401317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 238927 - 238978
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttg 265  Q
    ||||||||||||||||||||| |||||||| |||||| |||||  |||||||    
T  238927 ttaggcttaatagcagttttcgccccctaattttcacgaagttgcgattttg 238978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 3579593 - 3579648
Alignment:
Q  215 taggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||||||||||  ||| |||||||||| |||||  ||||||||||||    
T  3579593 taggcttaatagcagttttcgtcccttaactttcacgaagttgcgattttggcccc 3579648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 274
Target Start/End: Complemental strand, 1377517 - 1377463
Alignment:
Q  220 ttaatagcagttttcaccccctaactttcaccaagttctgattttggcccctaag 274  Q
    |||||| ||||||||  |||||||||||||| |||||  ||||||||||||||||    
T  1377517 ttaatatcagttttcgtcccctaactttcacgaagttgcgattttggcccctaag 1377463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 274
Target Start/End: Complemental strand, 1385265 - 1385211
Alignment:
Q  220 ttaatagcagttttcaccccctaactttcaccaagttctgattttggcccctaag 274  Q
    |||||| ||||||||  |||||||||||||| |||||  ||||||||||||||||    
T  1385265 ttaatatcagttttcgtcccctaactttcacgaagttgcgattttggcccctaag 1385211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 2853733 - 2853677
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||||||||||||||| ||| |||||||||| | |||||   |||||||||||    
T  2853733 ttaggcttaatagcagttttaacctcctaactttctcaaagttgcaattttggcccc 2853677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 10727187 - 10727239
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttgg 266  Q
    ||||||||||||||||||||| || |||||||||  | ||||| |||||||||    
T  10727187 ttaggcttaatagcagttttcgcctcctaactttagcgaagttgtgattttgg 10727239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 10727511 - 10727455
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||| |||||||||||||  ||||||||||||  | ||||| |||||||||||||    
T  10727511 ttaggcataatagcagttttagccccctaacttttccaaagttgtgattttggcccc 10727455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 18030944 - 18030988
Alignment:
Q  224 tagcagttttcaccccctaactttcaccaagttctgattttggcc 268  Q
    ||||||||||| ||||||||||||||| |||||  ||||||||||    
T  18030944 tagcagttttctccccctaactttcacgaagttgcgattttggcc 18030988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 35383764 - 35383818
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||    
T  35383764 aggcttaatagcagttttcgccccctaactttcacgaagttgtgattttggcccc 35383818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 35393986 - 35393934
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttgg 266  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||    
T  35393986 ttaggcttaatagcagttttcaccccctaactttcacgaagttgcgattttgg 35393934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 274
Target Start/End: Original strand, 19909172 - 19909230
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccctaag 274  Q
    |||||||||||||||||| |||||||||||||| | |||||  ||||||||||||||||    
T  19909172 aggcttaatagcagttttaaccccctaactttctcaaagttgcgattttggcccctaag 19909230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 14449276 - 14449326
Alignment:
Q  220 ttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||||| ||||||||||||||| |||||  ||||||||||||    
T  14449276 ttaatagcagttttcgccccctaactttcacgaagttgagattttggcccc 14449326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 25909486 - 25909540
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||||||||||||| |||||||||||||  | ||||| |||||||||||||    
T  25909486 aggcttaatagcagttttaaccccctaacttttccaaagttgtgattttggcccc 25909540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 274
Target Start/End: Complemental strand, 29697836 - 29697778
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccctaag 274  Q
    |||||||||||||||||||||| |||||||||||  |||||  |||||||| |||||||    
T  29697836 aggcttaatagcagttttcacctcctaactttcatgaagttgcgattttggtccctaag 29697778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 43074615 - 43074669
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||| ||||| ||||||||||||||| |||||  ||||||||||||    
T  43074615 aggcttaatagcaattttcgccccctaactttcacgaagttgcgattttggcccc 43074669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 49185571 - 49185623
Alignment:
Q  217 ggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||||||| |||||||||||||| |||||||  ||||||||||||    
T  49185571 ggcttaatagcagttttaaccccctaactttc-ccaagttgcgattttggcccc 49185623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 265
Target Start/End: Complemental strand, 53312600 - 53312551
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttg 265  Q
    |||||||||| |||||||||||||||||||||||| |||||  |||||||    
T  53312600 aggcttaataacagttttcaccccctaactttcacgaagttgcgattttg 53312551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 53924744 - 53924801
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccct 271  Q
    ||||||||||||| |||| || ||||||||||||||| ||||| |||||||| |||||    
T  53924744 ttaggcttaatagtagttctcgccccctaactttcacgaagttgtgattttgacccct 53924801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 6207492 - 6207433
Alignment:
Q  215 taggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccctaag 274  Q
    |||||||||||||||||||  |||||||| ||||   ||||| |||||||||||||||||    
T  6207492 taggcttaatagcagttttagccccctaattttcctaaagttgtgattttggcccctaag 6207433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 11824186 - 11824237
Alignment:
Q  215 taggcttaatagcagttttcaccccctaactttcaccaagttctgattttgg 266  Q
    ||||||||||||||||||| ||||||||||||||   ||||| |||||||||    
T  11824186 taggcttaatagcagttttaaccccctaactttcctaaagttgtgattttgg 11824237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 23759560 - 23759615
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccct 271  Q
    ||||||||||| ||||||| ||||||||||||||  |||||  |||||||||||||    
T  23759560 aggcttaatagtagttttcgccccctaactttcataaagttgcgattttggcccct 23759615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 49185870 - 49185820
Alignment:
Q  219 cttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||||||||||||||||| ||||||||| |||||  ||||||||||||    
T  49185870 cttaatagcagttttcaccccc-aactttcacaaagttgcgattttggcccc 49185820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 1571723 - 1571669
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcc 268  Q
    |||||||||||| ||||||||||  |||||||||||| |||||  ||||||||||    
T  1571723 ttaggcttaataacagttttcacgtcctaactttcacgaagttgcgattttggcc 1571669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 12719761 - 12719707
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||||||||||||| |||||||||||||| | |||||   |||||||||||    
T  12719761 aggcttaatagcagttttaaccccctaactttcccaaagttgatattttggcccc 12719707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 243
Target Start/End: Complemental strand, 30627090 - 30627061
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaa 243  Q
    ||||||||||||||||||||||||||||||    
T  30627090 ttaggcttaatagcagttttcaccccctaa 30627061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 50769675 - 50769622
Alignment:
Q  217 ggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||| |||||||||| |||||||||||| || |||||  ||||||||||||    
T  50769675 ggcttaaaagcagttttcgccccctaacttttacgaagttgcgattttggcccc 50769622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 32391720 - 32391773
Alignment:
Q  218 gcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccct 271  Q
    ||||||||||||||||| |||| |||||||||| ||||| ||||||||||||||    
T  32391720 gcttaatagcagttttcgccccttaactttcacgaagttgtgattttggcccct 32391773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 2974951 - 2974895
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||||||||||  ||||||||||||||| |||||  ||||||||||||    
T  2974951 ttaggcttaatagcagtttttgccccctaactttcacgaagttgcgattttggcccc 2974895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 274
Target Start/End: Complemental strand, 20512514 - 20512456
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccctaag 274  Q
    ||||||||||||||||||| || | |||||||||| |||||  ||||||||||||||||    
T  20512514 aggcttaatagcagttttcgcctcttaactttcacgaagttgcgattttggcccctaag 20512456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 12406038 - 12406094
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||||||||||  ||||||||||||| | |||||  ||||||||||||    
T  12406038 ttaggcttaatagcagttttagccccctaactttcccaaagttgcgattttggcccc 12406094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 35877592 - 35877560
Alignment:
Q  218 gcttaatagcagttttcaccccctaactttcac 250  Q
    |||||||||||||||||||||||||||||||||    
T  35877592 gcttaatagcagttttcaccccctaactttcac 35877560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 3999089 - 3999139
Alignment:
Q  220 ttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||||| ||||||||||||||| |||||  ||||||| ||||    
T  3999089 ttaatagcagttttcgccccctaactttcacgaagttgcgattttgacccc 3999139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 25364136 - 25364086
Alignment:
Q  220 ttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||||||||| ||||||||||| |||||   |||||||||||    
T  25364136 ttaatagcagttttcaccctctaactttcacgaagttgcaattttggcccc 25364086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 25911037 - 25910987
Alignment:
Q  219 cttaatagcagttttcaccccctaactttcaccaagttctgattttggccc 269  Q
    |||||||||||||||| ||||||||||||||| |||||  |||||| ||||    
T  25911037 cttaatagcagttttcgccccctaactttcacgaagttgagattttagccc 25910987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 35166610 - 35166548
Alignment:
Q  214 ttaggcttaatagcagttttc-accccctaactttcaccaagttctgattttgg-cccctaag 274  Q
    |||||||||||||||||||||  ||||||||||||||| |||||  |||||||| ||||||||    
T  35166610 ttaggcttaatagcagttttcgcccccctaactttcacgaagttgcgattttggtcccctaag 35166548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 267
Target Start/End: Original strand, 39574240 - 39574289
Alignment:
Q  218 gcttaatagcagttttcaccccctaactttcaccaagttctgattttggc 267  Q
    ||||||||||||||||| ||| ||||||||||| |||||  |||||||||    
T  39574240 gcttaatagcagttttcgccctctaactttcacgaagttgcgattttggc 39574289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 25910718 - 25910773
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||||||| ||||||| ||||||||||||||   ||||| |||||||||||||    
T  25910718 ttaggcttaataacagtttt-accccctaactttcttaaagttgtgattttggcccc 25910773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 39642199 - 39642252
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggccc 269  Q
    ||||||||||||||||||| ||||||||||||||| |||||  |||||||||||    
T  39642199 aggcttaatagcagttttcgccccctaactttcacgaagttgcgattttggccc 39642252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 25085396 - 25085456
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccctaag 274  Q
    ||||||||||||||||||||| ||||||||||||||  |||||  ||||||| ||||||||    
T  25085396 ttaggcttaatagcagttttcgccccctaactttcataaagttgcgattttgacccctaag 25085456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 23891662 - 23891713
Alignment:
Q  219 cttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||||||||||| | ||||||||||||| ||||| |||||||||||||    
T  23891662 cttaatagcagttttcgctccctaactttcacgaagttgtgattttggcccc 23891713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 3377825 - 3377772
Alignment:
Q  217 ggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||||||||||||  ||||||||||||| | ||||| |||||||||||||    
T  3377825 ggcttaatagcagttttagccccctaactttcccaaagttgtgattttggcccc 3377772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 256
Target Start/End: Complemental strand, 25486529 - 25486487
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagtt 256  Q
    ||||||||||||||||||||  ||||||||||||||| |||||    
T  25486529 ttaggcttaatagcagtttttgccccctaactttcacgaagtt 25486487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 18632651 - 18632602
Alignment:
Q  219 cttaatagcagttttcaccccctaactttcaccaagttctgattttggcc 268  Q
    |||||||||||||||| |||||||||||| || |||||  ||||||||||    
T  18632651 cttaatagcagttttcgccccctaacttttacgaagttgcgattttggcc 18632602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 5287887 - 5287835
Alignment:
Q  218 gcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||||||||||| ||||| |||||||| | |||||  ||||||||||||    
T  5287887 gcttaatagcagttttaaccccttaactttctcaaagttgcgattttggcccc 5287835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 23220878 - 23220826
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttgg 266  Q
    |||||||| |||||||||||| |||||||||||| || |||||  ||||||||    
T  23220878 ttaggcttgatagcagttttcgccccctaacttttacgaagttacgattttgg 23220826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 45738933 - 45738989
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||||| |||| || ||||||||||| | ||||| |||||||| ||||    
T  45738933 ttaggcttaatagcaattttaactccctaactttctcaaagttgtgattttgacccc 45738989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1458 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1458
Description:

Target: scaffold1458; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 1469 - 1524
Alignment:
Q  215 taggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||||||||||||||  ||||||||||||||| |||||  ||||||||||||    
T  1469 taggcttaatagcagttttagccccctaactttcacaaagttgagattttggcccc 1524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 17070906 - 17070960
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||||||||| |||| |||||||||| |||||  ||||||||||||    
T  17070906 aggcttaatagcagttttcgccccttaactttcacgaagttgcgattttggcccc 17070960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 17577366 - 17577312
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||||||||| |||| |||||||||| |||||  ||||||||||||    
T  17577366 aggcttaatagcagttttcgccccttaactttcacgaagttgcgattttggcccc 17577312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 37813161 - 37813215
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||||||||| ||||||||||||||| || ||  ||||||||||||    
T  37813161 aggcttaatagcagttttcgccccctaactttcacaaatttacgattttggcccc 37813215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 16982624 - 16982665
Alignment:
Q  215 taggcttaatagcagttttcaccccctaactttcaccaagtt 256  Q
    ||||||| |||||||||||||||||||||||||||| |||||    
T  16982624 taggcttgatagcagttttcaccccctaactttcacgaagtt 16982665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 256
Target Start/End: Complemental strand, 521757 - 521717
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagtt 256  Q
    |||||||||||||||||||||||||||| |||||| |||||    
T  521757 aggcttaatagcagttttcaccccctaattttcacgaagtt 521717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 23702121 - 23702181
Alignment:
Q  215 taggcttaatagcagttttcaccccctaactttcaccaagttctgattttgg-cccctaag 274  Q
    |||||||||||||||||||| |||| |||||||||| |||||  |||||||| ||||||||    
T  23702121 taggcttaatagcagttttcgccccttaactttcacaaagttacgattttggtcccctaag 23702181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 36688311 - 36688258
Alignment:
Q  217 ggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||||||| |||||||||||||  | ||||| |||||||| ||||    
T  36688311 ggcttaatagcagttttaaccccctaactttttcaaagttgtgattttgacccc 36688258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 39889769 - 39889826
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccct 271  Q
    ||||||||||||||||||||| || | |||||||||| |||||   ||||||||||||    
T  39889769 ttaggcttaatagcagttttcgcctcttaactttcacgaagttgcaattttggcccct 39889826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 22192307 - 22192355
Alignment:
Q  222 aatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    ||||||||||||| |||| |||||||||| |||||  ||||||||||||    
T  22192307 aatagcagttttcgccccttaactttcacgaagttgcgattttggcccc 22192355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 33298646 - 33298594
Alignment:
Q  218 gcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||| |||||||||||| || |||||||||||| |||||  ||||||||||||    
T  33298646 gcttgatagcagttttcgcctcctaactttcacgaagttgcgattttggcccc 33298594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 3637 - 3692
Alignment:
Q  215 taggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||||||||||||||  ||||||||||||| | |||||  ||||||||||||    
T  3637 taggcttaatagcagttttagccccctaactttcccaaagttgcgattttggcccc 3692  T

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Target: scaffold0306 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 3637 - 3692
Alignment:
Q  215 taggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccc 270  Q
    |||||||||||||||||||  ||||||||||||| | |||||  ||||||||||||    
T  3637 taggcttaatagcagttttagccccctaactttcccaaagttgcgattttggcccc 3692  T

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Target: scaffold0417 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 9653 - 9603
Alignment:
Q  215 taggcttaatagcagttttcaccccctaactttcaccaagttctgattttg 265  Q
    |||| |||||||||||||||||| |||||||||||| |||||  |||||||    
T  9653 taggtttaatagcagttttcacctcctaactttcacgaagttgcgattttg 9603  T

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Target: scaffold0725 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 6748 - 6688
Alignment:
Q  214 ttaggcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccctaag 274  Q
    ||||||||||||||||||||  |||||||| ||||| ||||||  |||||| | |||||||    
T  6748 ttaggcttaatagcagttttagccccctaagtttcaacaagttgcgattttagtccctaag 6688  T

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Target: scaffold0137 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 274
Target Start/End: Original strand, 19915 - 19971
Alignment:
Q  218 gcttaatagcagttttcaccccctaactttcaccaagttctgattttggcccctaag 274  Q
    |||||||||||||||| ||||||||| |||    ||||| |||||||||||||||||    
T  19915 gcttaatagcagttttaaccccctaaattttttaaagttgtgattttggcccctaag 19971  T

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Target: scaffold0062 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 256
Target Start/End: Original strand, 46075 - 46115
Alignment:
Q  216 aggcttaatagcagttttcaccccctaactttcaccaagtt 256  Q
    |||||| |||||||||||| ||||||||||||||| |||||    
T  46075 aggctttatagcagttttcgccccctaactttcacgaagtt 46115  T

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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 19038 - 19086
Alignment:
Q  215 taggcttaatagcagttttcaccccctaactttcaccaagttctgattt 263  Q
    |||||||||||| ||||||| |||| |||||||||| ||||| ||||||    
T  19038 taggcttaatagtagttttcgccccttaactttcacgaagttgtgattt 19086  T

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