View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18053_high_24 (Length: 310)
Name: NF18053_high_24
Description: NF18053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18053_high_24 |
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Alignment Details
Target: chr5 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 4856671 - 4856926
Alignment:
| Q |
1 |
cttgaagcatcaaagaaagaaacccttttcttcctttgatgaaattcacatagctttgagaaatgagagagtgaagttgaagaagggtttgacgttagtg |
100 |
Q |
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| T |
4856671 |
cttgaaacatcaaagaaagaaacccttttcttcctttgatgaaattcacatagttttgagaaatgagagagtgaagttgaagaagggtttgacgttagtg |
4856770 |
T |
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| Q |
101 |
ttagagaaaggtccattcaattcaattaagaaaaaagaattcaaattcaaaatgggtttttgttcttgttgatgatgatgttgttgttcatattgagttt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4856771 |
ttagagaaaggtccattcaattcaattaagaaaaaagaattcaaaatcaaaatgggtttttgttcttgttgatgatgatgttgttgttcatattgagttt |
4856870 |
T |
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| Q |
201 |
ggaaaagaacagaacaacaagaacaaagattcggatattttattgatatctacgaa |
256 |
Q |
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| T |
4856871 |
gcaaaagaacagaacaacaagaacaaagattcggatattttattgatatctacgaa |
4856926 |
T |
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