View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18053_low_16 (Length: 400)

Name: NF18053_low_16
Description: NF18053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18053_low_16
NF18053_low_16
[»] chr5 (7 HSPs)
chr5 (32-386)||(27401801-27402151)
chr5 (116-212)||(244604-244700)
chr5 (116-212)||(29950009-29950105)
chr5 (116-212)||(29951647-29951743)
chr5 (275-386)||(30648740-30648851)
chr5 (272-337)||(20865009-20865074)
chr5 (12-44)||(27402163-27402195)
[»] chr4 (10 HSPs)
chr4 (40-213)||(19459754-19459929)
chr4 (116-212)||(15017806-15017902)
chr4 (116-212)||(15019446-15019542)
chr4 (116-212)||(9167078-9167174)
chr4 (59-212)||(19458054-19458209)
chr4 (131-212)||(13518138-13518219)
chr4 (116-212)||(39488313-39488409)
chr4 (165-212)||(19460562-19460609)
chr4 (106-202)||(24663568-24663664)
chr4 (106-193)||(21484607-21484694)
[»] chr8 (1 HSPs)
chr8 (119-212)||(8366532-8366625)
[»] chr2 (3 HSPs)
chr2 (119-212)||(22300062-22300155)
chr2 (292-364)||(5179398-5179470)
chr2 (32-72)||(24806376-24806416)
[»] chr1 (6 HSPs)
chr1 (119-212)||(24157220-24157313)
chr1 (117-212)||(36233730-36233825)
chr1 (119-212)||(20190596-20190689)
chr1 (272-353)||(30199341-30199423)
chr1 (278-352)||(51487075-51487149)
chr1 (272-358)||(51507601-51507687)
[»] chr7 (5 HSPs)
chr7 (119-212)||(9595602-9595695)
chr7 (119-212)||(9646565-9646658)
chr7 (119-212)||(7843101-7843194)
chr7 (131-212)||(9647113-9647194)
chr7 (131-193)||(9596150-9596212)
[»] scaffold0269 (1 HSPs)
scaffold0269 (125-212)||(1575-1662)
[»] chr3 (1 HSPs)
chr3 (165-213)||(2693803-2693851)
[»] scaffold0013 (1 HSPs)
scaffold0013 (32-72)||(241599-241639)


Alignment Details
Target: chr5 (Bit Score: 310; Significance: 1e-174; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 32 - 386
Target Start/End: Complemental strand, 27402151 - 27401801
Alignment:
Q  32 tcaacgcatggttcaatttagaacaaaaaagaagcaaagctccaaaattcacacagtgattttttaaaacttacttcatctgtctttcatatcatttttg 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||    
T  27402151 tcaacgcatggttcaatttagaacaaaaaagaagcaaagctccaaaattca----gtgattttttaaaacttacttcatctgtctttcatatcatttttg 27402056  T
Q  132 tgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaaataaatgcagccactaattgaattagtgcaaaagaggt 231  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  27402055 tgctctttttatatgggctaattacaagatggctttgattctaaaactctcagaaaatgaaaataaatgcagccactaattgaattagtacaaaagatgt 27401956  T
Q  232 ggctgattagtgtacaaaagaggttaaacattcattggctccttgctttctccaactttttgaccacatcgatcatagtatatacgatcattttcttcac 331  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27401955 ggctgattagtctacaaaagaggttaaacattcattggctacttgctttctccaactttttgaccacatcgatcatagtatatacgatcattttcttcac 27401856  T
Q  332 ctgttacaaaagaaacagcaataaggagcaaactatacagaaaataccaaaaaga 386  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27401855 ctgttacaaaagaagcagcaataaggagcaaactatacagaaaataccaaaaaga 27401801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 244604 - 244700
Alignment:
Q  116 tttcatatcatttttgtgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaaataaatgcagccactaatt 212  Q
    |||||||||||||| ||||||| |||||| | ||| |||||| ||||  ||||| |||||||||||||||||||||||  ||||||| |||||||||    
T  244604 tttcatatcattttcgtgctctatttatatgagcttattacatgatgattttgactctaaaactcttagaaaatgaaaggaaatgcaaccactaatt 244700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 29950105 - 29950009
Alignment:
Q  116 tttcatatcatttttgtgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaaataaatgcagccactaatt 212  Q
    |||||||||||||| ||||||| |||||| | ||| |||||| ||||  ||||| |||||||||||||||||||||||  ||||||| |||||||||    
T  29950105 tttcatatcattttcgtgctctatttatatgagcttattacatgatgattttgactctaaaactcttagaaaatgaaaggaaatgcaaccactaatt 29950009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 29951743 - 29951647
Alignment:
Q  116 tttcatatcatttttgtgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaaataaatgcagccactaatt 212  Q
    |||||||||||||| ||||||| |||||| | ||| |||||| ||||  ||||| |||||||||||||||||||||||  ||||||| |||||||||    
T  29951743 tttcatatcattttcgtgctctatttatatgagcttattacatgatgattttgactctaaaactcttagaaaatgaaaggaaatgcaaccactaatt 29951647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 386
Target Start/End: Original strand, 30648740 - 30648851
Alignment:
Q  275 tgctttctccaactttttgaccacatcgatcatagtatatacgatcattttcttcacctgttacaaaagaaacagcaataaggagcaaactatacagaaa 374  Q
    ||||||||||||  |||| |||||||  | |||||| || |  |||||||||||||||||| || |||||| ||||||| |||| |||||| || |||||    
T  30648740 tgctttctccaatgttttaaccacataaaccatagtgtaaataatcattttcttcacctgtcaccaaagaagcagcaattaggaacaaactttatagaaa 30648839  T
Q  375 ataccaaaaaga 386  Q
    |||||| |||||    
T  30648840 ataccataaaga 30648851  T

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Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 337
Target Start/End: Original strand, 20865009 - 20865074
Alignment:
Q  272 ccttgctttctccaactttttgaccacatcgatcatagtatatacgatcattttcttcacctgtta 337  Q
    |||||| |||||||||||||  |||||||| | ||||| || ||  ||||||||||||||||||||    
T  20865009 ccttgccttctccaacttttctaccacatcaagcatagcatgtataatcattttcttcacctgtta 20865074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 27402195 - 27402163
Alignment:
Q  12 atgaaagccaatagaaattctcaacgcatggtt 44  Q
    ||||||||||||| |||||||||||||||||||    
T  27402195 atgaaagccaatacaaattctcaacgcatggtt 27402163  T

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Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 213
Target Start/End: Complemental strand, 19459929 - 19459754
Alignment:
Q  40 tggttcaatttagaacaaaaaagaagcaaagctccaaaattcacac--agtgattttttaaaacttacttcatctgtctttcatatcatttttgtgctct 137  Q
    |||||||||||||||| | | | |||||||||||| ||||||||||  |||||||||||  | |||| |||||||  ||| ||||||||||| |||| ||    
T  19459929 tggttcaatttagaaccatagataagcaaagctcccaaattcacacaaagtgattttttttagcttaattcatctcccttgcatatcattttcgtgcact 19459830  T
Q  138 ttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaaataaatgcagccactaattg 213  Q
     |||||| |  |  |||||| |||   |||||||||||||||||||||||||||||  ||||||| ||| ||||||    
T  19459829 atttatatgaacatattacatgattattttgattctaaaactcttagaaaatgaaaggaaatgcatccattaattg 19459754  T

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Target: chr4; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 15017806 - 15017902
Alignment:
Q  116 tttcatatcatttttgtgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaaataaatgcagccactaatt 212  Q
    |||||||||||||| ||||||| |||||| | ||| |||||| ||||  ||||| |||||||||||||||||||||||  ||||||| |||||||||    
T  15017806 tttcatatcattttcgtgctctatttatatgagcttattacatgatgattttgactctaaaactcttagaaaatgaaagaaaatgcaaccactaatt 15017902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 15019446 - 15019542
Alignment:
Q  116 tttcatatcatttttgtgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaaataaatgcagccactaatt 212  Q
    |||||||||||||| ||||||| |||||| | ||| |||||| ||||  ||||| |||||||||||||||||||||||  ||||||| |||||||||    
T  15019446 tttcatatcattttcgtgctctatttatatgagcttattacatgatgattttgactctaaaactcttagaaaatgaaaggaaatgcaaccactaatt 15019542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 9167174 - 9167078
Alignment:
Q  116 tttcatatcatttttgtgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaaataaatgcagccactaatt 212  Q
    |||||||||||||| ||||||| |||||| | ||| |||||| ||||  ||||| |||||||||||||||||||||||  |||| || |||||||||    
T  9167174 tttcatatcattttcgtgctctatttatatgagcttattacatgatgattttgactctaaaactcttagaaaatgaaaggaaatccaaccactaatt 9167078  T

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Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 212
Target Start/End: Complemental strand, 19458209 - 19458054
Alignment:
Q  59 aaagaagcaaagctccaaaattcacaca--gtgattttttaaaacttacttcatctgtctttcatatcatttttgtgctctttttatacgggctaattac 156  Q
    |||||||||||||||| |||||||||||  || |||||||  | |||| |||||||  |||  ||||||||||  |||||| |||||| | ||  |||||    
T  19458209 aaagaagcaaagctcccaaattcacacaaagttattttttttagcttaattcatctcccttatatatcattttcatgctctatttatatgagcctattac 19458110  T
Q  157 aagatggctttgattctaaaactcttagaaaatgaaaataaatgcagccactaatt 212  Q
    | ||||  ||||||||||| |||||||||||||||||  || || |||||||||||    
T  19458109 atgatgattttgattctaacactcttagaaaatgaaaggaagtgtagccactaatt 19458054  T

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Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 13518138 - 13518219
Alignment:
Q  131 gtgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaaataaatgcagccactaatt 212  Q
    ||||||| |||||| | ||| |||||| ||||  ||||| |||||||||||||||||||||||  |||||||||||||||||    
T  13518138 gtgctctatttatatgagcttattacatgatgattttgactctaaaactcttagaaaatgaaaggaaatgcagccactaatt 13518219  T

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Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 39488313 - 39488409
Alignment:
Q  116 tttcatatcatttttgtgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaaataaatgcagccactaatt 212  Q
    ||||||| |||||| ||||||| | |||| | ||  |||||| | ||  ||||| |||||||||||||||||||||||  |||||||||||||||||    
T  39488313 tttcataacattttcgtgctctatctatatgagcatattacatgttgattttgactctaaaactcttagaaaatgaaaggaaatgcagccactaatt 39488409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 19460562 - 19460609
Alignment:
Q  165 tttgattctaaaactcttagaaaatgaaaataaatgcagccactaatt 212  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||||    
T  19460562 tttgattctaaaactctttgaaaatgaaatgaaatgcagccactaatt 19460609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 24663568 - 24663664
Alignment:
Q  106 ttcatctgtctttcatatcatttttgtgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaaataaatgca 202  Q
    |||||||| ||| | ||||||||| ||||||| |||||| |   | |||||| ||||  ||||||||||||||||||||||||| |||  |||||||    
T  24663568 ttcatctgccttacgtatcattttcgtgctctatttatatgattttattacatgatgattttgattctaaaactcttagaaaataaaaggaaatgca 24663664  T

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Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 21484607 - 21484694
Alignment:
Q  106 ttcatctgtctttcatatcatttttgtgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaa 193  Q
    |||||||| ||| ||||||||||||||  | | |||||| | | | |||||| ||||  ||||||||||||||||||| |||||||||    
T  21484607 ttcatctgccttacatatcatttttgtattgtatttatatgcgtttattacatgatgattttgattctaaaactcttacaaaatgaaa 21484694  T

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Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 8366625 - 8366532
Alignment:
Q  119 catatcatttttgtgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaaataaatgcagccactaatt 212  Q
    ||||||||||| ||||||| |||||| | ||| |||||| || | |||||| |||||||||||||||||||||||  |||||||||||||||||    
T  8366625 catatcattttcgtgctctatttatatgagcttattacatgaggactttgactctaaaactcttagaaaatgaaaggaaatgcagccactaatt 8366532  T

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Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 22300062 - 22300155
Alignment:
Q  119 catatcatttttgtgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaaataaatgcagccactaatt 212  Q
    ||||||||||| ||||||| |||||| | ||| |||||| |||| |||||| |||||||||||||||||||||||  ||||||||||| |||||    
T  22300062 catatcattttcgtgctctatttatatgagcttattacatgatgactttgactctaaaactcttagaaaatgaaaggaaatgcagccattaatt 22300155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 5179470 - 5179398
Alignment:
Q  292 tgaccacatcgatcatagtatatacgatcattttcttcacctgttacaaaagaaacagcaataaggagcaaac 364  Q
    |||||||||| | |||||| ||||  |||||||||||||||||| || |||||| ||||||| |||| |||||    
T  5179470 tgaccacatcaaccatagtgtatataatcattttcttcacctgtcaccaaagaagcagcaattaggaacaaac 5179398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 24806376 - 24806416
Alignment:
Q  32 tcaacgcatggttcaatttagaacaaaaaagaagcaaagct 72  Q
    |||| ||||||||||||  ||||||||||||||||||||||    
T  24806376 tcaatgcatggttcaatccagaacaaaaaagaagcaaagct 24806416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 24157220 - 24157313
Alignment:
Q  119 catatcatttttgtgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaaataaatgcagccactaatt 212  Q
    ||||||||||| ||||||| |||||| | ||| |||||| ||||  ||||| |||||||||||||||||||||||  |||||||||||||||||    
T  24157220 catatcattttcgtgctctatttatatgagcttattacatgatgattttgactctaaaactcttagaaaatgaaagcaaatgcagccactaatt 24157313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 36233825 - 36233730
Alignment:
Q  117 ttcatatcatttttgtgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaaataaatgcagccactaatt 212  Q
    ||||||||||||| ||||||| |||||| | ||| |||||| ||||  ||| | |||||||||||||||||||||||  ||||||| |||||||||    
T  36233825 ttcatatcattttcgtgctctatttatatgagcttattacatgatgattttcactctaaaactcttagaaaatgaaaggaaatgcaaccactaatt 36233730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 20190596 - 20190689
Alignment:
Q  119 catatcatttttgtgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaaataaatgcagccactaatt 212  Q
    ||||||||||| ||| ||| |||||| | | | |||||| ||||  ||||| |||||||||||||||||||||||  |||||||||||||||||    
T  20190596 catatcattttcgtgatctatttatatgaggttattacatgatgattttgactctaaaactcttagaaaatgaaaggaaatgcagccactaatt 20190689  T

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Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 272 - 353
Target Start/End: Original strand, 30199341 - 30199423
Alignment:
Q  272 ccttgctttctccaactttttgaccacatcgatcatagtatatacgatcattttcttcacctgtta-caaaagaaacagcaat 353  Q
    |||||||||||||||||| ||||||| ||| | ||||| |||||  |||||||||||||||| ||| |||||||| |||||||    
T  30199341 ccttgctttctccaacttcttgaccaaatcaaccatagcatatataatcattttcttcaccttttaccaaaagaagcagcaat 30199423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 51487149 - 51487075
Alignment:
Q  278 tttctccaactttttgaccacatcgatcatagtatatacgatcattttcttcacctgttacaaaagaaacagcaa 352  Q
    ||||||||| || || |||||||| | ||||| |||||   |||||||||||||||||||| |||||||||||||    
T  51487149 tttctccaatttgttaaccacatcaagcatagcatatatagtcattttcttcacctgttaccaaagaaacagcaa 51487075  T

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Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 358
Target Start/End: Complemental strand, 51507687 - 51507601
Alignment:
Q  272 ccttgctttctccaactttttgaccacatcgatcatagtatatacgatcattttcttcacctgttacaaaagaaacagcaataagga 358  Q
    |||||||||||||||||| |  ||||  || | ||||| |||||  |||||||||||||||| | || |||||| ||||||||||||    
T  51507687 ccttgctttctccaacttctccaccagttcaagcatagcatatataatcattttcttcacctttgaccaaagaagcagcaataagga 51507601  T

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Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 9595602 - 9595695
Alignment:
Q  119 catatcatttttgtgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaaataaatgcagccactaatt 212  Q
    ||||||||||| ||||||| |||||| | | | |||||| ||||  ||||| |||||||||||||||||||||||  |||||||||||||||||    
T  9595602 catatcattttcgtgctctatttatatgagtttattacatgatgattttgactctaaaactcttagaaaatgaaaggaaatgcagccactaatt 9595695  T

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Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 9646565 - 9646658
Alignment:
Q  119 catatcatttttgtgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaaataaatgcagccactaatt 212  Q
    ||||||||||| ||||||| |||||| | | | |||||| ||||  ||||| |||||||||||||||||||||||  |||||||||||||||||    
T  9646565 catatcattttcgtgctctatttatatgagtttattacatgatgattttgactctaaaactcttagaaaatgaaaggaaatgcagccactaatt 9646658  T

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Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 7843194 - 7843101
Alignment:
Q  119 catatcatttttgtgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaaataaatgcagccactaatt 212  Q
    |||| |||||| ||||||| |||||| | ||| |||||| ||||  ||||| || ||||||||||||||||||||  |||||||||||||||||    
T  7843194 cataccattttcgtgctctatttatatgagcttattacatgatgattttgactcaaaaactcttagaaaatgaaaggaaatgcagccactaatt 7843101  T

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Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 9647113 - 9647194
Alignment:
Q  131 gtgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaaataaatgcagccactaatt 212  Q
    ||||||| |||||| | ||| |||||| ||||  ||||| |||||||||||||||||||||||  |||||||||||||||||    
T  9647113 gtgctctatttatatgagcttattacatgatgattttgactctaaaactcttagaaaatgaaaggaaatgcagccactaatt 9647194  T

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Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 9596150 - 9596212
Alignment:
Q  131 gtgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaa 193  Q
    ||||||| |||||| | ||| |||||| ||||  ||||| |||||||||||||||||||||||    
T  9596150 gtgctctatttatatgagcttattacatgatgattttgactctaaaactcttagaaaatgaaa 9596212  T

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Target: scaffold0269 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 125 - 212
Target Start/End: Original strand, 1575 - 1662
Alignment:
Q  125 atttttgtgctctttttatacgggctaattacaagatggctttgattctaaaactcttagaaaatgaaaataaatgcagccactaatt 212  Q
    ||||| ||||| | |||||| | ||| |||||| ||||  ||||| |||||||||||||||||||||||  ||||||||||| |||||    
T  1575 attttcgtgctatatttatatgagcttattacatgatgattttgactctaaaactcttagaaaatgaaaggaaatgcagccattaatt 1662  T

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Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 2693851 - 2693803
Alignment:
Q  165 tttgattctaaaactcttagaaaatgaaaataaatgcagccactaattg 213  Q
    ||||||||| ||||||||||||||| ||| |||||||| ||||||||||    
T  2693851 tttgattctgaaactcttagaaaataaaagtaaatgcaaccactaattg 2693803  T

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Target: scaffold0013 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 241639 - 241599
Alignment:
Q  32 tcaacgcatggttcaatttagaacaaaaaagaagcaaagct 72  Q
    |||||||||||||||||  ||||| ||||||||||||||||    
T  241639 tcaacgcatggttcaatccagaaccaaaaagaagcaaagct 241599  T

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