View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18053_low_4 (Length: 660)

Name: NF18053_low_4
Description: NF18053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18053_low_4
NF18053_low_4
[»] scaffold0349 (1 HSPs)
scaffold0349 (428-656)||(7605-7831)
[»] chr6 (34 HSPs)
chr6 (448-584)||(27585892-27586029)
chr6 (1-74)||(23073999-23074072)
chr6 (1-74)||(1149465-1149538)
chr6 (1-74)||(12935157-12935230)
chr6 (1-74)||(20741100-20741173)
chr6 (1-74)||(22219825-22219898)
chr6 (1-76)||(11277054-11277129)
chr6 (1-74)||(11445459-11445532)
chr6 (1-74)||(18257137-18257210)
chr6 (1-74)||(20741576-20741649)
chr6 (1-74)||(23075600-23075673)
chr6 (1-76)||(1149904-1149979)
chr6 (1-76)||(10900402-10900477)
chr6 (1-76)||(18257609-18257684)
chr6 (1-71)||(10899942-10900012)
chr6 (1-71)||(18504922-18504992)
chr6 (1-74)||(2319672-2319745)
chr6 (1-74)||(31470315-31470388)
chr6 (1-73)||(31470788-31470860)
chr6 (4-74)||(11444987-11445057)
chr6 (1-74)||(12935629-12935702)
chr6 (9-74)||(15828121-15828186)
chr6 (1-74)||(28472637-28472710)
chr6 (1-74)||(29859826-29859899)
chr6 (4-76)||(4811370-4811442)
chr6 (9-73)||(18505399-18505463)
chr6 (1-72)||(29033436-29033507)
chr6 (9-73)||(15827639-15827703)
chr6 (1-75)||(4811728-4811802)
chr6 (1-72)||(29035109-29035180)
chr6 (1-71)||(2322690-2322760)
chr6 (1-71)||(3835198-3835268)
chr6 (1-74)||(11276590-11276663)
chr6 (18-76)||(22534214-22534272)
[»] chr5 (36 HSPs)
chr5 (1-76)||(5819401-5819476)
chr5 (1-75)||(19359135-19359209)
chr5 (1-74)||(2865227-2865300)
chr5 (1-74)||(8461403-8461476)
chr5 (1-74)||(8647910-8647983)
chr5 (1-74)||(18183441-18183514)
chr5 (1-74)||(19359608-19359681)
chr5 (1-71)||(5818932-5819002)
chr5 (1-75)||(8647437-8647511)
chr5 (1-71)||(15372345-15372415)
chr5 (4-74)||(24362311-24362381)
chr5 (1-74)||(14215715-14215788)
chr5 (1-74)||(15708971-15709044)
chr5 (1-74)||(24331559-24331632)
chr5 (1-74)||(29455214-29455287)
chr5 (12-76)||(164189-164253)
chr5 (1-71)||(18182973-18183043)
chr5 (1-74)||(8460930-8461003)
chr5 (1-74)||(16018589-16018662)
chr5 (9-72)||(2864756-2864819)
chr5 (9-75)||(7349497-7349563)
chr5 (1-74)||(14463992-14464065)
chr5 (1-74)||(29454740-29454813)
chr5 (1-73)||(4222194-4222266)
chr5 (1-72)||(14215243-14215314)
chr5 (4-71)||(16019062-16019129)
chr5 (1-72)||(15371873-15371943)
chr5 (1-76)||(15709441-15709515)
chr5 (1-75)||(4623147-4623221)
chr5 (1-75)||(7348558-7348632)
chr5 (1-74)||(164663-164736)
chr5 (1-74)||(25000561-25000634)
chr5 (1-73)||(6018315-6018387)
chr5 (1-76)||(4219661-4219736)
chr5 (1-68)||(24325218-24325285)
chr5 (1-68)||(24361843-24361910)
[»] chr3 (47 HSPs)
chr3 (1-76)||(32535435-32535510)
chr3 (1-76)||(39556049-39556124)
chr3 (1-74)||(20840560-20840633)
chr3 (1-74)||(31779124-31779197)
chr3 (1-75)||(25853233-25853307)
chr3 (1-74)||(5137453-5137526)
chr3 (1-74)||(29801888-29801961)
chr3 (1-74)||(39555578-39555651)
chr3 (1-74)||(43973912-43973985)
chr3 (1-76)||(37727402-37727477)
chr3 (1-71)||(25612449-25612519)
chr3 (1-74)||(4275836-4275909)
chr3 (1-74)||(20841033-20841106)
chr3 (1-74)||(31778653-31778726)
chr3 (1-75)||(29801355-29801429)
chr3 (1-74)||(17464491-17464564)
chr3 (1-74)||(23644462-23644535)
chr3 (1-74)||(23644937-23645010)
chr3 (9-74)||(24301036-24301101)
chr3 (1-74)||(26837828-26837900)
chr3 (1-74)||(27393661-27393734)
chr3 (1-74)||(27394049-27394122)
chr3 (1-74)||(30098235-30098308)
chr3 (9-74)||(30104482-30104547)
chr3 (1-74)||(48452989-48453062)
chr3 (1-73)||(51473429-51473501)
chr3 (9-76)||(23228487-23228554)
chr3 (1-71)||(5136983-5137053)
chr3 (1-71)||(26274570-26274640)
chr3 (1-71)||(32534962-32535032)
chr3 (1-71)||(41046703-41046773)
chr3 (1-74)||(37222043-37222116)
chr3 (1-74)||(43973441-43973514)
chr3 (1-75)||(50116881-50116955)
chr3 (1-74)||(17464964-17465037)
chr3 (1-70)||(22425285-22425354)
chr3 (9-74)||(37726929-37726994)
chr3 (1-72)||(25853699-25853770)
chr3 (12-71)||(26837363-26837422)
chr3 (1-74)||(22424814-22424887)
chr3 (9-74)||(45965938-45966003)
chr3 (9-74)||(51474814-51474879)
chr3 (4-72)||(25420616-25420684)
chr3 (4-71)||(26275041-26275108)
chr3 (33-74)||(37220557-37220598)
chr3 (4-49)||(41047173-41047218)
chr3 (1-73)||(32697172-32697244)
[»] chr8 (27 HSPs)
chr8 (1-74)||(9930129-9930202)
chr8 (1-74)||(41681134-41681207)
chr8 (1-73)||(31133692-31133764)
chr8 (1-74)||(13225111-13225184)
chr8 (1-74)||(19176290-19176363)
chr8 (1-74)||(19176762-19176835)
chr8 (1-76)||(9178107-9178182)
chr8 (1-71)||(33328161-33328231)
chr8 (1-75)||(41681606-41681680)
chr8 (9-74)||(11656455-11656520)
chr8 (1-74)||(11656929-11657002)
chr8 (1-74)||(12571863-12571936)
chr8 (1-74)||(33742922-33742995)
chr8 (9-74)||(34541028-34541093)
chr8 (1-74)||(44831247-44831320)
chr8 (537-656)||(29264171-29264290)
chr8 (1-71)||(9928912-9928982)
chr8 (9-74)||(31133220-31133285)
chr8 (1-74)||(44831717-44831790)
chr8 (1-76)||(13224639-13224713)
chr8 (1-74)||(4629797-4629870)
chr8 (4-74)||(11336997-11337067)
chr8 (1-71)||(12572323-12572393)
chr8 (451-496)||(29264134-29264179)
chr8 (1-74)||(8074023-8074096)
chr8 (4-71)||(4630261-4630328)
chr8 (9-72)||(33328620-33328683)
[»] chr7 (26 HSPs)
chr7 (1-74)||(2658839-2658912)
chr7 (1-74)||(19590525-19590598)
chr7 (1-74)||(35289373-35289446)
chr7 (1-74)||(19590997-19591070)
chr7 (1-74)||(32004614-32004687)
chr7 (1-74)||(38859113-38859186)
chr7 (1-76)||(32005086-32005161)
chr7 (1-76)||(35288901-35288976)
chr7 (1-71)||(19830423-19830493)
chr7 (9-74)||(37786767-37786832)
chr7 (4-71)||(4478175-4478242)
chr7 (4-74)||(34533791-34533861)
chr7 (9-74)||(19830899-19830964)
chr7 (1-74)||(34534263-34534336)
chr7 (1-74)||(37787239-37787312)
chr7 (1-74)||(38160951-38161024)
chr7 (1-74)||(38858643-38858716)
chr7 (1-61)||(29099863-29099923)
chr7 (1-71)||(29100323-29100393)
chr7 (13-71)||(4641443-4641501)
chr7 (1-74)||(23952730-23952804)
chr7 (1-74)||(2659312-2659385)
chr7 (9-74)||(28583439-28583504)
chr7 (1-71)||(4641916-4641983)
chr7 (1-73)||(28584394-28584466)
chr7 (1-68)||(23953201-23953268)
[»] chr4 (46 HSPs)
chr4 (1-74)||(15523235-15523308)
chr4 (1-74)||(23494915-23494988)
chr4 (1-76)||(11153619-11153694)
chr4 (1-76)||(22434177-22434252)
chr4 (1-75)||(25447246-25447320)
chr4 (1-75)||(46193404-46193478)
chr4 (1-71)||(54995539-54995609)
chr4 (1-74)||(25447708-25447781)
chr4 (1-74)||(25938143-25938216)
chr4 (1-72)||(46193877-46193948)
chr4 (1-71)||(4220031-4220101)
chr4 (1-75)||(12234801-12234875)
chr4 (4-74)||(16318251-16318321)
chr4 (1-75)||(45082896-45082970)
chr4 (1-74)||(25937670-25937743)
chr4 (9-74)||(51021275-51021340)
chr4 (9-72)||(2118295-2118358)
chr4 (1-72)||(4219559-4219630)
chr4 (1-72)||(18763992-18764063)
chr4 (1-72)||(23494445-23494516)
chr4 (9-76)||(35363081-35363148)
chr4 (1-74)||(12234329-12234402)
chr4 (9-74)||(15523714-15523779)
chr4 (1-74)||(20470983-20471056)
chr4 (1-73)||(20958331-20958403)
chr4 (1-72)||(33109686-33109757)
chr4 (4-74)||(11153146-11153216)
chr4 (1-71)||(18751602-18751672)
chr4 (1-71)||(48526653-48526723)
chr4 (1-71)||(54995072-54995142)
chr4 (9-74)||(10258367-10258432)
chr4 (10-71)||(22434657-22434718)
chr4 (9-74)||(33109944-33110009)
chr4 (1-72)||(38962291-38962362)
chr4 (1-74)||(48526196-48526269)
chr4 (9-74)||(48708295-48708360)
chr4 (1-74)||(51020797-51020870)
chr4 (1-73)||(44890518-44890590)
chr4 (18-76)||(16691560-16691618)
chr4 (1-55)||(43243752-43243806)
chr4 (20-74)||(48293594-48293648)
chr4 (9-74)||(22170417-22170481)
chr4 (1-73)||(44892620-44892692)
chr4 (9-71)||(2118775-2118837)
chr4 (1-55)||(43281262-43281316)
chr4 (1-71)||(45082435-45082504)
[»] chr1 (36 HSPs)
chr1 (1-73)||(4636443-4636515)
chr1 (1-76)||(8679013-8679088)
chr1 (1-72)||(33144391-33144462)
chr1 (1-71)||(5963050-5963120)
chr1 (1-74)||(15646667-15646740)
chr1 (1-74)||(18984119-18984192)
chr1 (1-74)||(18984591-18984664)
chr1 (1-74)||(50970750-50970823)
chr1 (1-73)||(5539817-5539889)
chr1 (9-73)||(8678542-8678606)
chr1 (1-76)||(21856515-21856590)
chr1 (1-76)||(26859057-26859132)
chr1 (1-76)||(29870091-29870166)
chr1 (4-74)||(5540293-5540363)
chr1 (1-71)||(15173099-15173169)
chr1 (1-75)||(29306952-29307026)
chr1 (1-75)||(29307414-29307488)
chr1 (1-74)||(9018973-9019046)
chr1 (1-74)||(15646192-15646265)
chr1 (1-74)||(26859531-26859604)
chr1 (1-74)||(29869620-29869693)
chr1 (1-66)||(33143925-33143990)
chr1 (9-74)||(39154500-39154565)
chr1 (1-74)||(50970278-50970351)
chr1 (1-72)||(17433687-17433758)
chr1 (1-72)||(21856044-21856115)
chr1 (1-74)||(15173566-15173638)
chr1 (1-74)||(52268290-52268363)
chr1 (1-76)||(17433214-17433289)
chr1 (1-72)||(47826966-47827037)
chr1 (1-74)||(2733429-2733502)
chr1 (1-74)||(9019435-9019508)
chr1 (1-72)||(39154021-39154092)
chr1 (1-73)||(5962579-5962651)
chr1 (1-49)||(47827060-47827108)
chr1 (1-72)||(52269220-52269291)
[»] scaffold0176 (2 HSPs)
scaffold0176 (1-76)||(19093-19168)
scaffold0176 (9-74)||(18835-18900)
[»] chr2 (36 HSPs)
chr2 (1-76)||(28616611-28616686)
chr2 (1-74)||(1978108-1978181)
chr2 (1-74)||(1978581-1978654)
chr2 (1-74)||(11090992-11091065)
chr2 (1-74)||(18450830-18450903)
chr2 (1-74)||(18451303-18451376)
chr2 (1-74)||(20440503-20440576)
chr2 (1-74)||(20444749-20444822)
chr2 (1-74)||(22374320-22374393)
chr2 (1-74)||(26538551-26538624)
chr2 (1-74)||(43058804-43058877)
chr2 (1-71)||(11090524-11090594)
chr2 (1-71)||(40027612-40027682)
chr2 (1-74)||(22374797-22374870)
chr2 (1-74)||(26538097-26538170)
chr2 (1-74)||(28617086-28617159)
chr2 (1-74)||(40027140-40027213)
chr2 (1-73)||(239824-239896)
chr2 (1-73)||(35781135-35781207)
chr2 (9-72)||(40815347-40815410)
chr2 (1-71)||(8425832-8425902)
chr2 (1-71)||(14432145-14432215)
chr2 (1-71)||(40815817-40815887)
chr2 (1-75)||(43058332-43058406)
chr2 (1-74)||(239353-239425)
chr2 (1-74)||(7446342-7446415)
chr2 (1-74)||(7446818-7446891)
chr2 (1-68)||(3025472-3025539)
chr2 (1-76)||(35779706-35779781)
chr2 (9-74)||(28847175-28847240)
chr2 (1-71)||(8425358-8425428)
chr2 (4-72)||(14432616-14432684)
chr2 (9-76)||(3025942-3026008)
chr2 (1-72)||(8972239-8972310)
chr2 (1-72)||(15552526-15552596)
chr2 (9-72)||(15551501-15551564)
[»] scaffold0951 (2 HSPs)
scaffold0951 (1-74)||(1667-1740)
scaffold0951 (1-74)||(2139-2212)
[»] scaffold0295 (2 HSPs)
scaffold0295 (1-74)||(4793-4866)
scaffold0295 (4-72)||(5266-5334)
[»] scaffold1223 (2 HSPs)
scaffold1223 (1-76)||(1213-1288)
scaffold1223 (1-72)||(755-826)
[»] scaffold0417 (2 HSPs)
scaffold0417 (9-75)||(11103-11169)
scaffold0417 (1-55)||(10640-10694)
[»] scaffold0273 (1 HSPs)
scaffold0273 (1-74)||(4679-4752)
[»] scaffold0057 (2 HSPs)
scaffold0057 (1-74)||(61028-61101)
scaffold0057 (1-71)||(61930-62000)
[»] scaffold1585 (1 HSPs)
scaffold1585 (1-73)||(568-640)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-71)||(64777-64847)
scaffold0007 (1-74)||(64302-64375)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-74)||(134145-134218)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-70)||(28715-28784)
[»] scaffold0432 (2 HSPs)
scaffold0432 (1-71)||(9935-10005)
scaffold0432 (1-71)||(10344-10414)
[»] scaffold0027 (2 HSPs)
scaffold0027 (1-74)||(42630-42703)
scaffold0027 (1-71)||(42172-42242)
[»] scaffold0076 (1 HSPs)
scaffold0076 (9-71)||(8489-8551)


Alignment Details
Target: scaffold0349 (Bit Score: 132; Significance: 3e-68; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 428 - 656
Target Start/End: Original strand, 7605 - 7831
Alignment:
Q  428 aataaaatttcgttcaaaccttcaagcttaatttccgtggaggccgactatggcctctattagagaaaagcggacagaccgcc-cgtcagtgtccattgc 526  Q
    ||||||||||||| |||| |||||| |||||||||||||    ||||||||||||||| ||||||||||| ||||||||| || ||||||||||||||||    
T  7605 aataaaatttcgtccaaagcttcaaacttaatttccgtga---ccgactatggcctctgttagagaaaagtggacagaccaccacgtcagtgtccattgc 7701  T
Q  527 atgctagttgtagataaaatgaacactaacactggaatgtgagcagaattccacaaacctccaatcttggcattgtgaagtacacttcccctactaattg 626  Q
    ||||||||||||||||||||||| |||||||   |||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||| || |||     
T  7702 atgctagttgtagataaaatgaaaactaacatcagaatgtgagcagaactccacaaacctgcaaccttggcattgtgaagtacacttcccctcctgattc 7801  T
Q  627 tctgtcgaatatatgaaactcgtataagtt 656  Q
    ||||| |||| |||||||||||||||||||    
T  7802 tctgttgaatttatgaaactcgtataagtt 7831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 9e-41; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 448 - 584
Target Start/End: Original strand, 27585892 - 27586029
Alignment:
Q  448 ttcaagcttaatttccgtggaggccgactatggcctctattagagaaaagcggacagaccgc-ccgtcagtgtccattgcatgctagttgtagataaaat 546  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||   || ||||||||||| ||||||||||||||||||||    
T  27585892 ttcaagcttaatttccctggaggccgactatggcctctattagagaaaaccggacagaccgcaatgttagtgtccattgtatgctagttgtagataaaat 27585991  T
Q  547 gaacactaacactggaatgtgagcagaattccacaaac 584  Q
    ||| |||||||   |||||||||||||| |||||||||    
T  27585992 gaaaactaacatcagaatgtgagcagaaatccacaaac 27586029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 23074072 - 23073999
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  23074072 ttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 23073999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 1149538 - 1149465
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  1149538 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 1149465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12935230 - 12935157
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  12935230 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 12935157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20741173 - 20741100
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  20741173 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 20741100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22219825 - 22219898
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  22219825 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 22219898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 11277054 - 11277129
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| |||||||||||||||| |||||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  11277054 ttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagccaa 11277129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11445459 - 11445532
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  11445459 ttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11445532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18257210 - 18257137
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| |||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  18257210 ttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcc 18257137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20741576 - 20741649
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||| ||||||||||||||    
T  20741576 ttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaagagtgtaattaagcc 20741649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 23075600 - 23075673
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  23075600 ttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 23075673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 1149904 - 1149979
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||||||||||||||||| || ||||||| ||||||||| ||||||| |||| ||||||||||||||||||||    
T  1149904 ttgttctattttaaaagggcatgaccagtttcatgagtaggctaaaacacgaggaccaaaagtgtaattaagccaa 1149979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 10900402 - 10900477
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  10900402 ttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagccaa 10900477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 18257609 - 18257684
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||| |||| ||||||| ||||||||||||    
T  18257609 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtataattaagccaa 18257684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10900012 - 10899942
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| | || |||||||||||||||    
T  10900012 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 10899942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 18504992 - 18504922
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||||||||| |||| |||||||||||||||    
T  18504992 ttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 18504922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2319745 - 2319672
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||||| |||| ||||| ||||||||||||    
T  2319745 ttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcc 2319672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 31470388 - 31470315
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||| ||| || ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  31470388 ttgttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 31470315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 31470788 - 31470860
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagc 73  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||| |||| |||||||||||||||||    
T  31470788 ttgttctgttttaaaagggcagaaccagtttcgtgagtaggctaaaacacaaggaccaaaagtgtaattaagc 31470860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 11445057 - 11444987
Alignment:
Q  4 ttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||| ||||||| |||||||| ||| ||||||||||||||||||||| |||| ||||||||||||||||||    
T  11445057 ttctgttttaaaggggcaggaccagcttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11444987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 12935629 - 12935702
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||| || ||||||| |||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  12935629 ttgttctgttttataaaggcaggaccagtttcgtgagtacgccaaaacacgaggaccaaaagtgtaattaagcc 12935702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 15828121 - 15828186
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||||||| | || ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  15828121 ttttaaaagggtatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 15828186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28472710 - 28472637
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||| ||||||| || |||||||||| ||||||||||| |||| ||||||||||||||||||    
T  28472710 ttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcc 28472637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29859899 - 29859826
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||| ||||||| || |||||||||| ||||||||||| |||| ||||||||||||||||||    
T  29859899 ttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcc 29859826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 4811442 - 4811370
Alignment:
Q  4 ttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    |||||||||||||||||| || ||||||||||||||| |||||| ||  ||| ||||||||||||||||||||    
T  4811442 ttctattttaaaagggcatgaccagtttcgtgagtagaccaaaatactgggaccaaaagtgtaattaagccaa 4811370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 18505399 - 18505463
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagc 73  Q
    |||||||||||||||| ||||||||||||||| ||||||||| |||| ||||||| |||||||||    
T  18505399 ttttaaaagggcaggatcagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaagc 18505463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 29033507 - 29033436
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||||| |||||||||||||||| || ||||||||| ||||||||| || |||| ||||||||||||||||    
T  29033507 ttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaatacgaggaccaaaagtgtaattaag 29033436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 15827703 - 15827639
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagc 73  Q
    |||||||||| ||| | |||||||||||||| |||||||||| |||| |||||||||||||||||    
T  15827703 ttttaaaaggacagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 15827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 4811728 - 4811802
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcca 75  Q
    ||||||| ||||||||  ||| || ||||||| ||||||||||||||||| |||| ||||||| |||||||||||    
T  4811728 ttgttctgttttaaaaatgcatgatcagtttcatgagtaggccaaaacacgaggatcaaaagtataattaagcca 4811802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 29035109 - 29035180
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||||| |||||||||||||  | || |||||||||||||| ||||||| ||||  |||||||||||||||    
T  29035109 ttgttctgttttaaaagggcataaccaatttcgtgagtaggctaaaacacgaggacgaaaagtgtaattaag 29035180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2322690 - 2322760
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| |||||||| |||| ||  |||||||||||||| ||||||||| | || |||||||||||||||    
T  2322690 ttgttctgttttaaaaaggcaagactagtttcgtgagtagaccaaaacacgaagaccaaaagtgtaattaa 2322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 3835198 - 3835268
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| |||||||  ||||||| || ||||||||||||| ||||||||  ||| |||||||||||||||    
T  3835198 ttgttctgttttaaagaggcaggaccattttcgtgagtaggtcaaaacacatggaccaaaagtgtaattaa 3835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11276663 - 11276590
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||| |||| ||||||| ||||||| |||||||||  |||  ||| |||||||||||||    
T  11276663 ttgttctgttttaaaagggtaggatcagtttcatgagtagaccaaaacacgcggactaaacgtgtaattaagcc 11276590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 22534214 - 22534272
Alignment:
Q  18 ggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| || |||||||||| || ||||| || |||| ||||||||||||||||||||    
T  22534214 ggcaggaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaagccaa 22534272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 3e-25; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 5819401 - 5819476
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  5819401 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaa 5819476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 19359209 - 19359135
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcca 75  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||  |||| |||||||||||||||||||    
T  19359209 ttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacaagaggaccaaaagtgtaattaagcca 19359135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 2865227 - 2865300
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  2865227 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 2865300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8461403 - 8461476
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  8461403 ttgttctgttttaaaagagcaggaacagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8461476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8647910 - 8647983
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  8647910 ttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8647983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18183441 - 18183514
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  18183441 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 18183514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 19359608 - 19359681
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  19359608 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19359681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 5819002 - 5818932
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||    
T  5819002 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5818932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 8647511 - 8647437
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcca 75  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  8647511 ttgttctgttttaaaacggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcca 8647437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15372345 - 15372415
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||    
T  15372345 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15372415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 24362311 - 24362381
Alignment:
Q  4 ttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||| |||||||||||||||| |||||||||||||||||||||| || |||| ||||||||||||||||||    
T  24362311 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 24362381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 14215715 - 14215788
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||| |||| ||||| ||||||||||||    
T  14215715 ttgttctgttttaaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggaccaaaattgtaattaagcc 14215788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15709044 - 15708971
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||  | ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  15709044 ttgttctgttttaaaagggcataaccagtttcgtgagtaggccaaaacactaggaccaaaagtgtaattaagcc 15708971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 24331632 - 24331559
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| |||||||||||||||  |||||||| |||| ||||||||||||||||||    
T  24331632 ttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagcc 24331559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29455214 - 29455287
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||| ||||||||| |||| |||| |||||||||||||    
T  29455214 ttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaggtgtaattaagcc 29455287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 164253 - 164189
Alignment:
Q  12 taaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||||||||| |||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  164253 taaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagccaa 164189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 18183043 - 18182973
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||||| | || |||||||||||||||    
T  18183043 ttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 18182973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8461003 - 8460930
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||| || | || |||||||| |||||||||    
T  8461003 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtggaattaagcc 8460930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 16018662 - 16018589
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||||||||||||||||| || || |||||||| ||||||||||||| | || ||||||||||||||||||    
T  16018662 ttgttctattttaaaagggcatgatcaatttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 16018589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 2864819 - 2864756
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||||||||||| || || |||||||||||||||||||||| |||| ||||||||||||||||    
T  2864819 ttttaaaagggcatgatcaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 7349497 - 7349563
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcca 75  Q
    ||||||||| |||||| || |||||||||||| ||||||||| |||| |||||||||||||||||||    
T  7349497 ttttaaaagagcaggaccaatttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagcca 7349563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 14463992 - 14464065
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||||||||||||| ||  |  |||||||||||||||||||||||| ||||  |||||||||||||||||    
T  14463992 ttgttctattttaaaaggacaaaattagtttcgtgagtaggccaaaacacgaggactaaaagtgtaattaagcc 14464065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29454813 - 29454740
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||| || || |||||||||||||||||||||| | || |||||||| |||||||||    
T  29454813 ttgttctgttttaaaagggcatgaccaatttcgtgagtaggccaaaacacaatgaccaaaagtgaaattaagcc 29454740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4222194 - 4222266
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagc 73  Q
    ||||||| ||||||||||||| || || ||||||||| || ||||||||| |||| |||||||||||||||||    
T  4222194 ttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgaggaccaaaagtgtaattaagc 4222266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 14215314 - 14215243
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||||| ||||||||||| |  | |||||||||||||| |||||||||| |||| ||||||||||||||||    
T  14215314 ttgttctgttttaaaagggtataaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaag 14215243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 16019062 - 16019129
Alignment:
Q  4 ttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    |||||||||||||| |||||| || ||||||||||| |||||||||  |||| |||||||||||||||    
T  16019062 ttctattttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaa 16019129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 15371943 - 15371873
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||||| |||||||||||||||| || || ||||||||| |||||| || |||| ||||||||||||||||    
T  15371943 ttgttctgttttaaaagggcaggaccaatt-cgtgagtagaccaaaatacgaggatcaaaagtgtaattaag 15371873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15709441 - 15709515
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| ||||||| ||||| ||  |||||| ||||||||||||||||| | || ||||||||||||||||||||    
T  15709441 ttgttctgttttaaa-gggcatgactagtttcatgagtaggccaaaacacaatgaccaaaagtgtaattaagccaa 15709515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 4623221 - 4623147
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcca 75  Q
    ||||||| |||||||  ||||||| || ||||||||||| | |||||||| | || |||||||||||||||||||    
T  4623221 ttgttctgttttaaagaggcaggaccaatttcgtgagtaagtcaaaacacgatgaccaaaagtgtaattaagcca 4623147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7348632 - 7348558
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcca 75  Q
    ||||||| ||||||||||||| || || |||||||||||| | ||||||  |||| ||||| |||||||||||||    
T  7348632 ttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaacatgaggaccaaaaatgtaattaagcca 7348558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 164663 - 164736
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||| || |||||| |||||| ||||||||||  |||| ||||| | ||||||||||    
T  164663 ttgttctgttttaaaagggcaagaccagtttagtgagttggccaaaacatgaggatcaaaattataattaagcc 164736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25000561 - 25000634
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||  || || || |||||||||||||||||||||  | || ||||||||||||||||||    
T  25000561 ttgttctgttttaaaagaacatgaccaatttcgtgagtaggccaaaacatgaagaccaaaagtgtaattaagcc 25000634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6018387 - 6018315
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagc 73  Q
    ||||||| |||||||||| || || |||||||||||||||  |||||||| || | ||||| |||||||||||    
T  6018387 ttgttctgttttaaaaggacatgaccagtttcgtgagtagaacaaaacacgagaaccaaaaatgtaattaagc 6018315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 4219736 - 4219661
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| |||||||| |||| || || ||| || | ||| ||||||||| |||| ||||||||||||||||||||    
T  4219736 ttgttctgttttaaaaaggcatgaccatttttgtaaatagcccaaaacacgaggatcaaaagtgtaattaagccaa 4219661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24325285 - 24325218
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaat 68  Q
    ||||||| ||||| ||||||| || |||||||||| |||||||||||||   ||| ||||||||||||    
T  24325285 ttgttctgttttacaagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24361910 - 24361843
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaat 68  Q
    ||||||| ||||| ||||||| || |||||||||| |||||||||||||   ||| ||||||||||||    
T  24361910 ttgttctgttttacaagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 3e-25; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 32535435 - 32535510
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  32535435 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaa 32535510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 39556049 - 39556124
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  39556049 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaa 39556124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20840633 - 20840560
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  20840633 ttgttctattttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 20840560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 31779124 - 31779197
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  31779124 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 31779197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 25853307 - 25853233
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcca 75  Q
    ||||||||||||||||||||| || || |||||||||||||||||||||| |||| |||||||||||||||||||    
T  25853307 ttgttctattttaaaagggcatgaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcca 25853233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 5137453 - 5137526
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||||||||||||||||| | ||||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  5137453 ttgttctattttaaaagggcagaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 5137526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29801888 - 29801961
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||| || |||| ||||||||||||||||||    
T  29801888 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggatcaaaagtgtaattaagcc 29801961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 39555651 - 39555578
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  39555651 ttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 39555578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43973912 - 43973985
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||| | ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  43973912 ttgttctgttttaaaagggcagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 43973985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 37727402 - 37727477
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  37727402 ttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagccaa 37727477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 25612449 - 25612519
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    |||||||||||||||||||||||| || ||||||||||||| |||||||| |||| |||||||||||||||    
T  25612449 ttgttctattttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaa 25612519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4275836 - 4275909
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||| ||| || ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  4275836 ttgttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 4275909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20841033 - 20841106
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||||||||| || | ||||||||||||||||||    
T  20841033 ttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgagcaccaaaagtgtaattaagcc 20841106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 31778726 - 31778653
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||| ||||||| ||||||||| |||| ||||||||||||||||||    
T  31778726 ttgttctgttttaaaagggcaggaccagtttcatgagtagaccaaaacacgaggaccaaaagtgtaattaagcc 31778653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 29801429 - 29801355
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcca 75  Q
    ||||||| |||||||||||||||| |||||| ||||||| |||||||||| | || |||||||||||||||||||    
T  29801429 ttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacgatgaccaaaagtgtaattaagcca 29801355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17464564 - 17464491
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||| || |||||||| || ||||||||||||| |||| ||||||||||||||||||    
T  17464564 ttgttctgttttaaaagggcatgaccagtttcgcgaataggccaaaacacgaggaccaaaagtgtaattaagcc 17464491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 23644535 - 23644462
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||| ||||||| || ||||||||||||||||||| || |||| ||||||||||||||||||    
T  23644535 ttgttctgttttaaaatggcaggaccaatttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 23644462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 23644937 - 23645010
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||| |||| || |||||||||||||||||||||| |||| ||||||| ||||||||||    
T  23644937 ttgttctgttttaaaagggtaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 23645010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 24301036 - 24301101
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||| ||||||| || |||||||||||||||||||||| |||| ||||||||||||||||||    
T  24301036 ttttaaaatggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 24301101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 26837828 - 26837900
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||||||||||| |||||| | ||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  26837828 ttgttctattttaaa-gggcagaaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcc 26837900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27393734 - 27393661
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||| ||||||| |||||| ||||||||| |||||||| |||| ||||||||||||||||||    
T  27393734 ttgttctgttttaaaatggcaggaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 27393661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 27394049 - 27394122
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||| ||||||| |  |||||||||||||||||||||| |||| ||||||||||||||||||    
T  27394049 ttgttctgttttaaaaaggcaggacctatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 27394122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 30098235 - 30098308
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||| || |||||||||||||| | |||||||| |||| ||||||||||||||||||    
T  30098235 ttgttctgttttaaaagggcaagaccagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcc 30098308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 30104547 - 30104482
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||||||||||| || ||||||||||||| |||||||| |||| ||||||||||||||||||    
T  30104547 ttttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 30104482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 48453062 - 48452989
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||||||||| | || |||||||||||| |||||    
T  48453062 ttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaatcaagcc 48452989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 51473501 - 51473429
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagc 73  Q
    ||||||| |||||||||||||||| || |||||||| ||| ||||||||| |||| |||||||||||||||||    
T  51473501 ttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggaccaaaagtgtaattaagc 51473429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 23228487 - 23228554
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||||||||| || || ||||||||||||||||||||||  ||| ||||||||||||||||||||    
T  23228487 ttttaaaagggcatgatcattttcgtgagtaggccaaaacacggggaccaaaagtgtaattaagccaa 23228554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 5137053 - 5136983
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| ||||||||||||| || || |||||||||| ||||||||||| |||| |||||||||||||||    
T  5137053 ttgttctgttttaaaagggcatgaccaatttcgtgagttggccaaaacacgaggaccaaaagtgtaattaa 5136983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 26274640 - 26274570
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||| || |||| ||||| |||||||||    
T  26274640 ttgttctgttttaaaagggcaggaccagtttcgtgagtagtccaaaatacaaggatcaaaaatgtaattaa 26274570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 32535032 - 32534962
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| |||||||| ||||||| || ||||||||||| |||||||||| |||| |||||||||||||||    
T  32535032 ttgttctgttttaaaaaggcaggaccaatttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaa 32534962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 41046773 - 41046703
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| ||||||||||||| || ||||||||| | ||||||||||||| |||| |||||||||||||||    
T  41046773 ttgttctgttttaaaagggcatgaccagtttcgtaattaggccaaaacacgaggaccaaaagtgtaattaa 41046703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 37222043 - 37222116
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||| ||||||| || ||| ||||||||| |||||||| |||| ||||||||||||||||||    
T  37222043 ttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaattaagcc 37222116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43973514 - 43973441
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||  | || ||||||||||||| |||||||| |||| ||||||||||||||||||    
T  43973514 ttgttctgttttaaaagggcataatcattttcgtgagtaggacaaaacacgaggaccaaaagtgtaattaagcc 43973441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 50116881 - 50116955
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcca 75  Q
    ||||||| ||| ||||||||| || || ||||||||||| | |||||||| |||| |||||||||||||||||||    
T  50116881 ttgttctctttcaaaagggcatgaccaatttcgtgagtaagtcaaaacacgaggatcaaaagtgtaattaagcca 50116955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17464964 - 17465037
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||||||||||||||   || ||||||| || |||||||||||||| |||| ||||| ||||||||||||    
T  17464964 ttgttctattttaaaagggtcagaccagtttcatgcgtaggccaaaacacgaggaccaaaaatgtaattaagcc 17465037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 22425285 - 22425354
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaatta 70  Q
    ||||||| ||||| ||||||| || ||| |||||||||||||| |||||| |||| ||||||||||||||    
T  22425285 ttgttctgttttacaagggcatgaccagattcgtgagtaggccgaaacacgaggaccaaaagtgtaatta 22425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 37726994 - 37726929
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||||||||| | ||||||||| || || ||||||||| |||| ||||||||||||||||||    
T  37726994 ttttaaaagggcagaaccagtttcgtaagcagaccaaaacacgaggaccaaaagtgtaattaagcc 37726929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 25853699 - 25853770
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||||| |||||||| | || || |||||||||||||||  |||||||| |||| ||||||||||||||||    
T  25853699 ttgttctgttttaaaatgacaagaccagtttcgtgagtagagcaaaacacgaggatcaaaagtgtaattaag 25853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 26837422 - 26837363
Alignment:
Q  12 taaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||||||||| || ||||||||||||||||||| || |||| ||||| |||||||||    
T  26837422 taaaagggcaggaccaatttcgtgagtaggccaaaatacaaggaccaaaaatgtaattaa 26837363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22424887 - 22424814
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||| ||| | ||||||||| |||||||  |||||| || | ||||||||||||||||||    
T  22424887 ttgttctgttttaaaaggacagaaccagtttcgtaagtaggcttaaacacgagaaccaaaagtgtaattaagcc 22424814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 45966003 - 45965938
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||||| ||||||  |  |||||||||| |||||||||| |||| ||||||||||||||||||    
T  45966003 ttttaaaagagcaggattaacttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcc 45965938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 51474814 - 51474879
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||||||||| || || ||||||||||| ||||||||||  | | ||||||||||||||||||    
T  51474814 ttttaaaagggcatgaccaatttcgtgagtatgccaaaacacgggaaccaaaagtgtaattaagcc 51474879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 25420616 - 25420684
Alignment:
Q  4 ttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    |||||||||||||||||  || || ||||||||||||| ||||| || | || ||||||||||||||||    
T  25420616 ttctattttaaaagggcgtgatcaatttcgtgagtaggtcaaaatacgatgatcaaaagtgtaattaag 25420684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 26275041 - 26275108
Alignment:
Q  4 ttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    |||| ||||||||||| |||| |||||||||||||||| |||||||| |||  ||||| | |||||||    
T  26275041 ttctgttttaaaagggtaggaccagtttcgtgagtaggtcaaaacacaagggccaaaattataattaa 26275108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 37220598 - 37220557
Alignment:
Q  33 gtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||||||||||| || |||| ||||||||||||||||||    
T  37220598 gtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 37220557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 41047173 - 41047218
Alignment:
Q  4 ttctattttaaaagggcaggaacagtttcgtgagtaggccaaaaca 49  Q
    |||| |||||||||| ||| | ||||||||||||||||||||||||    
T  41047173 ttctgttttaaaaggacagaaccagtttcgtgagtaggccaaaaca 41047218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 32697172 - 32697244
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagc 73  Q
    ||||||| ||||||||||||  ||  | |||||||||||||| ||||||| |||| ||||| | |||||||||    
T  32697172 ttgttctgttttaaaagggcgtgactaatttcgtgagtaggctaaaacacgaggaccaaaaatataattaagc 32697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 5e-24; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9930129 - 9930202
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||||||||||||||||    
T  9930129 ttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 9930202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41681207 - 41681134
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  41681207 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 41681134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 31133692 - 31133764
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagc 73  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  31133692 ttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 31133764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13225111 - 13225184
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  13225111 ttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 13225184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19176363 - 19176290
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||||||  |||||||||||||||||||||||| |||| ||||||||||||||||||    
T  19176363 ttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19176290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 19176762 - 19176835
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||||||||| |||| ||||||||||||||||||    
T  19176762 ttgttctgttttaaaagggcaggaccagttacgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19176835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 9178107 - 9178182
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| |||||| |||||| || ||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  9178107 ttgttctgttttaagagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaa 9178182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 33328231 - 33328161
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||||| |||| |||||||||||||||    
T  33328231 ttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 33328161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 41681606 - 41681680
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcca 75  Q
    ||||||| ||||||||||| |||| ||||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  41681606 ttgttctgttttaaaagggtaggaccagtttcgtgattaggccaaaacacgaggaccaaaagtgtaattaagcca 41681680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 11656520 - 11656455
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||||||||| || ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  11656520 ttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11656455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11656929 - 11657002
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||| | ||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  11656929 ttgttctgttttaaaaggccgggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11657002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12571936 - 12571863
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||| || | ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  12571936 ttgttctgttttaaaagggtagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 12571863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 33742995 - 33742922
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||| || |||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  33742995 ttgttctgttttaaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 33742922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 34541028 - 34541093
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||||| |||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  34541028 ttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 34541093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 44831320 - 44831247
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| || |||||||||||||||||||||  |||| ||||||||||||||||||    
T  44831320 ttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 44831247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 537 - 656
Target Start/End: Original strand, 29264171 - 29264290
Alignment:
Q  537 tagataaaatgaacactaacactggaatgtgagcagaattccacaaacctccaatcttggcattgtgaagtacacttcccctactaattgtctgtcgaat 636  Q
    ||||||||||||| |||||||   |||||||||||||| ||||||||||| ||  ||||||||||||||||| |||||  || || ||| |||||  |||    
T  29264171 tagataaaatgaaaactaacatcagaatgtgagcagaactccacaaacctgcagccttggcattgtgaagtaaacttctgctcctgattctctgttaaat 29264270  T
Q  637 atatgaaactcgtataagtt 656  Q
     ||| |||||||||||||||    
T  29264271 ttatcaaactcgtataagtt 29264290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9928982 - 9928912
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| |||||||||||||||| |||||||||||||||  |||||||| |||| |||||||||||||||    
T  9928982 ttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaa 9928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 31133285 - 31133220
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||||||| ||| |||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  31133285 ttttaaaagggcgggaccagtttcgtgagtagggcaaaacacgaggaccaaaagtgtaattaagcc 31133220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 44831717 - 44831790
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||| |||||| |||||||||||||| |||||||||| |||| ||||||||| ||||||||    
T  44831717 ttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 44831790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 13224713 - 13224639
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| |||||||||||||| | ||||||||||||||||||||||||| | || |||||||||||||| |||||    
T  13224713 ttgttctgttttaaaagggcag-accagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaattatgccaa 13224639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4629870 - 4629797
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||||||||||||||||||| ||||||||||| || |||||||||| || |  ||||||| |||||||||    
T  4629870 ttgttctattttaaaagggcaggaccagtttcgtgaatatgccaaaacacgagaattaaaagtgcaattaagcc 4629797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 11336997 - 11337067
Alignment:
Q  4 ttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||| |||||||||||| ||| || ||||||||||| |||||||||| | || ||||||||||||||||||    
T  11336997 ttctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtgtaattaagcc 11337067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 12572323 - 12572393
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| ||||||||| ||| ||  |||||||||||||| ||||||||| |||| |||||||||||||||    
T  12572323 ttgttctgttttaaaagagcatgactagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 12572393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 451 - 496
Target Start/End: Original strand, 29264134 - 29264179
Alignment:
Q  451 aagcttaatttccgtggaggccgactatggcctctattagagaaaa 496  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||    
T  29264134 aagcttaatttccgtggaggccgactttggcctctattagataaaa 29264179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8074023 - 8074096
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||| || || || |||||||| ||||||||||||| |||| ||||||| ||| ||||||    
T  8074023 ttgttctgttttaaaaggacatgatcattttcgtgaataggccaaaacacgaggaccaaaagtataactaagcc 8074096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 4630261 - 4630328
Alignment:
Q  4 ttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    |||| ||||||||  |||||| || |||||||||||| ||||||||| | || |||||||||||||||    
T  4630261 ttctgttttaaaaatgcaggaccaatttcgtgagtagcccaaaacacgatgatcaaaagtgtaattaa 4630328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 33328620 - 33328683
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||||||| ||| ||  |||||||||||||||| ||||||| |||| ||||||| ||||||||    
T  33328620 ttttaaaagagcatgactagtttcgtgagtaggctaaaacacgaggaccaaaagtctaattaag 33328683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 5e-24; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2658912 - 2658839
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||  |||||||||||||||||    
T  2658912 ttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaattaagcc 2658839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19590598 - 19590525
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  19590598 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19590525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 35289373 - 35289446
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  35289373 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 35289446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 19590997 - 19591070
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| || | ||||||||||||||||||    
T  19590997 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagtaccaaaagtgtaattaagcc 19591070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 32004687 - 32004614
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| || |||||||||||||||||||||| |||| ||||||||||||||||||    
T  32004687 ttgttctgttttaaaagggcaggatcaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 32004614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38859113 - 38859186
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| || |||||||||||||||||||||| |||| ||||||||||||||||||    
T  38859113 ttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 38859186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 32005086 - 32005161
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||||||||||||||||| || |||||||||||||| |||||||||  |||| ||||||||||||||||||||    
T  32005086 ttgttctattttaaaagggcatgaccagtttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaagccaa 32005161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 35288976 - 35288901
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||| || | || ||||||||||||||||||||    
T  35288976 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtgtaattaagccaa 35288901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 19830493 - 19830423
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||||| |||| |||||||||||||||    
T  19830493 ttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 19830423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 37786832 - 37786767
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||||||||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  37786832 ttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcc 37786767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 4478175 - 4478242
Alignment:
Q  4 ttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||| ||||    
T  4478175 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaa 4478242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 34533861 - 34533791
Alignment:
Q  4 ttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||| ||||||||| ||| || ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  34533861 ttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 34533791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 19830899 - 19830964
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||||| ||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  19830899 ttttaaaaggacaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19830964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 34534263 - 34534336
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||||||| || | ||||||| ||||||||||    
T  34534263 ttgttctgttttaaatgggcaggatcagtttcgtgagtaggccaaaacacgagaaccaaaagtataattaagcc 34534336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 37787239 - 37787312
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||  |||||||| |||||| ||||||||||||||||||||||||| |||| ||||||| ||||||||||    
T  37787239 ttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 37787312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38161024 - 38160951
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||||||  | |||||||||||||||||||| | |||| ||||||||||||||||||    
T  38161024 ttgttctgttttaaaagggcaggattattttcgtgagtaggccaaaacccgaggaccaaaagtgtaattaagcc 38160951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38858716 - 38858643
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||| |||||| |||||||||||||| |||||||||| |||| ||||||||| ||||||||    
T  38858716 ttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 38858643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29099923 - 29099863
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaa 61  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| |||||    
T  29099923 ttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaa 29099863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 29100323 - 29100393
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| |||||||||||||||| || ||| |||||||| ||||||||| |||| |||||||||||||||    
T  29100323 ttgttctgttttaaaagggcaggaccaattttgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 29100393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 4641501 - 4641443
Alignment:
Q  13 aaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||| |||||| |||||||||||||| |||||||||| |||| |||||||||||||||    
T  4641501 aaaagagcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaa 4641443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 23952804 - 23952730
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagta-ggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||| || || ||||||||||| || |||||||| |||| ||||||||||||||||||    
T  23952804 ttgttctgttttaaaagggcatgaccaatttcgtgagtagggtcaaaacacgaggaccaaaagtgtaattaagcc 23952730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 2659312 - 2659385
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||| || ||||||| ||| ||||||||||| | |||| ||||| ||||||||||||    
T  2659312 ttgttctgttttaaaagggcaagaccagtttcatgaataggccaaaacgcgaggaccaaaattgtaattaagcc 2659385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 28583504 - 28583439
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||||||||| | || | || ||||||||||||||||| |||| ||||||||||||||||||    
T  28583504 ttttaaaagggcagaaccaatctcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 28583439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 4641916 - 4641983
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| |||||||||| ||||| ||||   |||||||||||||||||| |||| |||||||||||||||    
T  4641916 ttgttctgttttaaaaggacaggaccagt---gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 28584394 - 28584466
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagc 73  Q
    ||||||| |||||||||| || || || |||||||| ||||||||| ||| ||||  ||||||||||||||||    
T  28584394 ttgttctgttttaaaaggacatgaccaatttcgtgaataggccaaagcacgaggacgaaaagtgtaattaagc 28584466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23953201 - 23953268
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaat 68  Q
    ||||||| |||| ||||||| ||| |||||||||||||||  |||||||| |||| ||||| ||||||    
T  23953201 ttgttctgttttgaaagggcgggaccagtttcgtgagtagatcaaaacacgaggaccaaaaatgtaat 23953268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 5e-24; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15523308 - 15523235
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  15523308 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 15523235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 23494915 - 23494988
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  23494915 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 23494988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 11153619 - 11153694
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  11153619 ttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaa 11153694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 22434252 - 22434177
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| |||||||||||||||| |||||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  22434252 ttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagccaa 22434177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 25447320 - 25447246
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcca 75  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||||||| |||| |||||||||||||||||||    
T  25447320 ttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcca 25447246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 46193478 - 46193404
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcca 75  Q
    ||||||| |||||||||||||||| || |||||||||||||||||||||| |||| |||||||||||||||||||    
T  46193478 ttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcca 46193404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 54995539 - 54995609
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||| |||| |||||||||||||||    
T  54995539 ttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 54995609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25447708 - 25447781
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| | || ||||||||||||||||||    
T  25447708 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaattaagcc 25447781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25938143 - 25938216
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| || |||||||||||||||||||||| |||| ||||||||||||||||||    
T  25938143 ttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcc 25938216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 46193877 - 46193948
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||||| |||||||||||||||| || |||||||||||||||||||||| |||| ||||||||||||||||    
T  46193877 ttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 46193948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 4220031 - 4220101
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||||||| |||| |||||||||||||||    
T  4220031 ttgttctgttttaaaagagcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4220101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 12234801 - 12234875
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcca 75  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||||| |||| ||||||| |||||||||||    
T  12234801 ttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcca 12234875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 16318251 - 16318321
Alignment:
Q  4 ttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||| |||||||||||||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  16318251 ttctgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 16318321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 45082896 - 45082970
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcca 75  Q
    ||||||| ||||||||||||| || |||||||||||||| |||||||||| |||| |||||||||||||||||||    
T  45082896 ttgttctgttttaaaagggcatgaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcca 45082970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 25937743 - 25937670
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||||| |||| ||||| ||||||||||||    
T  25937743 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggctaaaacacgaggaccaaaaatgtaattaagcc 25937670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 51021275 - 51021340
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||||||||||| || |||||||||||||||||||||| |||| ||||||||||||||||||    
T  51021275 ttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 51021340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 2118358 - 2118295
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    |||||||||||||||| || |||||||||||||||||||||| |||| ||||||||||||||||    
T  2118358 ttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2118295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 4219630 - 4219559
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  4219630 ttgttttattttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 4219559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 18763992 - 18764063
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||||| |||||||||| || || ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  18763992 ttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 18764063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 23494516 - 23494445
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||||| ||||||||||||||||  |||||||||||||||||||||||| |||| ||||| ||||||||||    
T  23494516 ttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 23494445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 35363081 - 35363148
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||||| |||| | ||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  35363081 ttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccaa 35363148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12234402 - 12234329
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||| || |||||||||  |||| ||||||||||||||||||    
T  12234402 ttgttctgttttaaaagggcaggaccagtttcgtgaataagccaaaacaagaggaccaaaagtgtaattaagcc 12234329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 15523714 - 15523779
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||||||||||| ||||||||||||||| ||||||||| | || ||||||||||||||||||    
T  15523714 ttttaaaagggcaggaccagtttcgtgagtagcccaaaacacgatgaccaaaagtgtaattaagcc 15523779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20470983 - 20471056
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||| | || ||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  20470983 ttgttctgttttaaaagggaatgaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcc 20471056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 20958331 - 20958403
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagc 73  Q
    ||||||| |||||||||||||||| || ||||||||||||||||||| || ||||  ||||||||||||||||    
T  20958331 ttgttctgttttaaaagggcaggaccattttcgtgagtaggccaaaatacgaggactaaaagtgtaattaagc 20958403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 33109757 - 33109686
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||||| ||||||||| |||||| |||||||||||||| |||||||||| |||| ||||| ||||||||||    
T  33109757 ttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaaatgtaattaag 33109686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 11153216 - 11153146
Alignment:
Q  4 ttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||||||||||||| || || ||| |||||||||||||||||| |||| ||||||| ||||||||||    
T  11153216 ttctattttaaaagggcatgaccaattttgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 11153146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 18751672 - 18751602
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| ||||||||||||| || ||||||  ||||||||||||||||| |||| |||||||||||||||    
T  18751672 ttgttctgttttaaaagggcatgaccagttttatgagtaggccaaaacacgaggaccaaaagtgtaattaa 18751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 48526653 - 48526723
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| ||||||||||||| || ||||||||||||||| ||||||||| |||| ||||||| |||||||    
T  48526653 ttgttctgttttaaaagggcaagaccagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaa 48526723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 54995142 - 54995072
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| ||||||||||| ||||  ||||||||||||||||||| |||| |||| |||||||||||||||    
T  54995142 ttgttctgttttaaaagggtaggactagtttcgtgagtaggccaatacacgaggaccaaaagtgtaattaa 54995072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 10258367 - 10258432
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||||||||||| || |||| ||||||||||| ||||| |||| ||||||||||||||||||    
T  10258367 ttttaaaagggcaggaccaatttcctgagtaggccacaacacgaggaccaaaagtgtaattaagcc 10258432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 22434657 - 22434718
Alignment:
Q  10 tttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| ||||||| ||||||||||||||||||||||||| |||| ||||| |||||||||    
T  22434657 tttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 22434718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 33109944 - 33110009
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||||||||||| || ||||||||| |||||||||||  |||| ||||||||||||||||||    
T  33109944 ttttaaaagggcaggaccaatttcgtgagcaggccaaaacatgaggaccaaaagtgtaattaagcc 33110009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 38962291 - 38962362
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||||| |||||||||||| ||| ||||||||||| ||| ||||||||| |||| ||||| ||||||||||    
T  38962291 ttgttctgttttaaaagggccggaccagtttcgtgaatagaccaaaacacgaggaccaaaaatgtaattaag 38962362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 48526269 - 48526196
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||||   ||||||| |||||||| |||||||| || | ||||||||||||||||||    
T  48526269 ttgttctgttttaaaagggcagagccagtttcatgagtaggtcaaaacacgagaaccaaaagtgtaattaagcc 48526196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 48708360 - 48708295
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||||||||||| || |||||||  |||||||||||||  ||| ||||||||||||||||||    
T  48708360 ttttaaaagggcaggatcattttcgtggttaggccaaaacacatggaccaaaagtgtaattaagcc 48708295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 51020870 - 51020797
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| |||||| |||| |  |||||||||  |||| ||||||||||||||||||    
T  51020870 ttgttctgttttaaaagggcaggaccagtttagtgaattagccaaaacatgaggatcaaaagtgtaattaagcc 51020797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 44890590 - 44890518
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagc 73  Q
    ||||||| ||||||||||||| || || |||||||| |||| |||||||| |||| ||||| |||||||||||    
T  44890590 ttgttctgttttaaaagggcatgaccattttcgtgaataggtcaaaacacaaggaccaaaattgtaattaagc 44890518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 16691560 - 16691618
Alignment:
Q  18 ggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| || ||||||||||||| ||||||||  ||| ||||||||||||||||||||    
T  16691560 ggcaggaccattttcgtgagtaggtcaaaacacagggatcaaaagtgtaattaagccaa 16691618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43243752 - 43243806
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccagga 55  Q
    ||||||| ||||||||||||| || || |||||||||||||||||||||| ||||    
T  43243752 ttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacgagga 43243806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 48293648 - 48293594
Alignment:
Q  20 caggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||| || ||||||||||| |||||||||| |||| ||||||||||||||||||    
T  48293648 caggatcaatttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 48293594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 22170417 - 22170481
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||| ||||||| || |||||| |||||| |||||||| |||| ||||||||||||||||||    
T  22170417 ttttaaaaaggcagga-caatttcgtcagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 22170481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 44892620 - 44892692
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagc 73  Q
    ||||||| |||||||| ||||| | || ||||||||||||| |||||||| |||| ||||| | |||||||||    
T  44892620 ttgttctgttttaaaatggcagaaccattttcgtgagtaggtcaaaacacgaggaccaaaaatataattaagc 44892692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 2118775 - 2118837
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||||||  |||| ||||||| |||| |||||||||||| | || |||||||||||||||    
T  2118775 ttttaaaaggataggaccagtttcatgagcaggccaaaacacgaagaccaaaagtgtaattaa 2118837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43281262 - 43281316
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccagga 55  Q
    ||||||| |||||||| |||| || || |||||||||||||||||||||| ||||    
T  43281262 ttgttctgttttaaaatggcatgaccattttcgtgagtaggccaaaacacgagga 43281316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45082504 - 45082435
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    |||||||||||||||||||||  | ||||| ||||||||| ||||||||| | || |||||| ||||||||    
T  45082504 ttgttctattttaaaagggcaaaaccagtt-cgtgagtagaccaaaacacgatgaccaaaagcgtaattaa 45082435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 2e-23; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4636443 - 4636515
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagc 73  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  4636443 ttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 4636515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8679013 - 8679088
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||||||||| |||| ||||||||||||||||||||    
T  8679013 ttgttctgttttaaaagggcaggaccagttccgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaa 8679088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 33144391 - 33144462
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  33144391 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 33144462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 5963050 - 5963120
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||| |||| |||||||||||||||    
T  5963050 ttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5963120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15646667 - 15646740
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  15646667 ttgttctgttttaaaagggtaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 15646740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18984192 - 18984119
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  18984192 ttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagcc 18984119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18984591 - 18984664
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| || |||||||||||||||||||||| |||| ||||||||||||||||||    
T  18984591 ttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcc 18984664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 50970750 - 50970823
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  50970750 ttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcc 50970823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 5539889 - 5539817
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagc 73  Q
    ||||||| |||||||||||||||| || |||||||||||||||||||||| |||| |||||||||||||||||    
T  5539889 ttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5539817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 8678606 - 8678542
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagc 73  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  8678606 ttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8678542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 21856515 - 21856590
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| |||||||| ||||||| ||||||| ||||||||||||||||| |||| ||||||||||||||||||||    
T  21856515 ttgttctgttttaaaaaggcaggatcagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagccaa 21856590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 26859132 - 26859057
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| |||||||| ||||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  26859132 ttgttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacacaaggaccaaaagtgtaattaagccaa 26859057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 29870091 - 29870166
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| |||||||| ||||||| ||||||| ||||||||||||||||| |||| ||||||||||||||||||||    
T  29870091 ttgttctgttttaaaatggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagccaa 29870166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 5540293 - 5540363
Alignment:
Q  4 ttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||| |||||||||| ||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  5540293 ttctgttttaaaaggacaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 5540363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 15173169 - 15173099
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    |||||| |||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||||||||    
T  15173169 ttgttcaattttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 29307026 - 29306952
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcca 75  Q
    ||||||| |||||||||| || || ||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  29307026 ttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcca 29306952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 29307414 - 29307488
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcca 75  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||| |||| |||||||| ||||||||||    
T  29307414 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgcaattaagcca 29307488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 9019046 - 9018973
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||| | ||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  9019046 ttgttctgttttaaaagggcagaaccagtttcgttagtaggccaaaacacgaggaccaaaagtgtaattaagcc 9018973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15646265 - 15646192
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||||| |||| ||||||| ||||||||||    
T  15646265 ttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 15646192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 26859531 - 26859604
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||||||  |||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  26859531 ttgttctgttttaaaagggcaggattagtttcgtgagtagcccaaaacacgaggatcaaaagtgtaattaagcc 26859604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29869693 - 29869620
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||| || |||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  29869693 ttgttctgttttaaaagggcaagaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcc 29869620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 33143990 - 33143925
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgta 66  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||    
T  33143990 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 33143925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 39154500 - 39154565
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||||| |||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  39154500 ttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 39154565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 50970351 - 50970278
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||  |||||||| |||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  50970351 ttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 50970278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 17433687 - 17433758
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||||| ||||||||||||| || ||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  17433687 ttgttctgttttaaaagggcatgaccagtttcgtgagtaggccagaacacgaggaccaaaagtgtaattaag 17433758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 21856115 - 21856044
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||||| |||||||||||||||| |||||||||||||||  |||||||| |||| ||||||||||||||||    
T  21856115 ttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaag 21856044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15173566 - 15173638
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||| ||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  15173566 ttgttctgttttaaaagg-caggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 15173638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 52268363 - 52268290
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| || ||||||||| ||||||||| || |||| ||||||||||||||||||    
T  52268363 ttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaatacgaggaccaaaagtgtaattaagcc 52268290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 17433289 - 17433214
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| ||||||||||||| |  ||||||| ||||||||||||||||  |||| ||||||||||||||||||||    
T  17433289 ttgttctgttttaaaagggcatggtcagtttcatgagtaggccaaaacatgaggaccaaaagtgtaattaagccaa 17433214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 47827037 - 47826966
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||| ||||||||||||||| || || |||||||||||| ||||||||| |||| ||||||||||||||||    
T  47827037 ttgttatattttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaag 47826966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 2733429 - 2733502
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| || ||||| || ||||||||||||| |||| ||||||| ||||||||||    
T  2733429 ttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataattaagcc 2733502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9019435 - 9019508
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||| ||||| | |||||| ||||||||| |||||||| |||| ||||||||||||||||||    
T  9019435 ttgttctgttttaaaatggcagaaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 9019508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 39154092 - 39154021
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||||| ||||||||||||| || |||||||||||||| |||||||||  | || ||||||||||||||||    
T  39154092 ttgttctgttttaaaagggcatgatcagtttcgtgagtatgccaaaacatgatgaccaaaagtgtaattaag 39154021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 5962651 - 5962579
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagc 73  Q
    ||||||| |||||||||||| ||| ||||||||||| ||| ||| ||||| |||| ||||| |||||||||||    
T  5962651 ttgttctgttttaaaagggccggaccagtttcgtgaatagaccataacacgaggaccaaaaatgtaattaagc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 47827060 - 47827108
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaaca 49  Q
    ||||||| ||||||||||||| || || |||||||||||||||||||||    
T  47827060 ttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaaca 47827108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 52269220 - 52269291
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||||| |||||||||||||| | |  |||| |||||| | |||||||| |||| ||||||||||||||||    
T  52269220 ttgttctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggaccaaaagtgtaattaag 52269291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 56; Significance: 7e-23; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 19093 - 19168
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| ||||||||||||||||  |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  19093 ttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaa 19168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 18900 - 18835
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||||||||| || ||||||||||||||||||||||||  |||| |||||||||||| |||||    
T  18900 ttttaaaagggcaagaccagtttcgtgagtaggccaaaacagaaggaccaaaagtgtaatgaagcc 18835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 7e-23; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 28616686 - 28616611
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  28616686 ttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaa 28616611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 1978181 - 1978108
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||| ||||||||||||    
T  1978181 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacaaggaccaaaaatgtaattaagcc 1978108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1978581 - 1978654
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| || |||||||||||||||||||||| |||| ||||||||||||||||||    
T  1978581 ttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcc 1978654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11090992 - 11091065
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  11090992 ttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11091065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18450903 - 18450830
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  18450903 ttgttctgttttaaaagggctggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 18450830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18451303 - 18451376
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  18451303 ttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcc 18451376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20440503 - 20440576
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  20440503 ttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcc 20440576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20444822 - 20444749
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  20444822 ttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcc 20444749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22374393 - 22374320
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  22374393 ttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 22374320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 26538551 - 26538624
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  26538551 ttgttctgttttaagagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 26538624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43058804 - 43058877
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  43058804 ttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 43058877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 11090594 - 11090524
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| ||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||||||||    
T  11090594 ttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 11090524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 40027612 - 40027682
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| |||||||||||||||| || |||||||||||||||||||||| |||| |||||||||||||||    
T  40027612 ttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 40027682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22374797 - 22374870
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||| || || |||||||||||||||||||||| |||| ||||||||||||||||||    
T  22374797 ttgttctgttttaaaagggcaagaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 22374870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 26538170 - 26538097
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||| | |||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  26538170 ttgttctgttttaaaagggcagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 26538097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 28617086 - 28617159
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||| ||| | ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  28617086 ttgttctgttttaaaaggacagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 28617159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 40027213 - 40027140
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||||| | || ||||||||||||||||||    
T  40027213 ttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagcc 40027140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 239824 - 239896
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagc 73  Q
    ||||||| |||||||||||||||| || |||||||||||||||||||||| |||| ||||||||||| |||||    
T  239824 ttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaactaagc 239896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 35781135 - 35781207
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagc 73  Q
    ||||||| ||||||||||||| || || |||||||||||||||||||||| |||| |||||||||||||||||    
T  35781135 ttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 35781207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 40815410 - 40815347
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||||||||||| || ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  40815410 ttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 40815347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 8425832 - 8425902
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    |||||||||||||||||||||||| || |||||||||||| ||||||||| || | |||||||||||||||    
T  8425832 ttgttctattttaaaagggcaggaccaatttcgtgagtagaccaaaacacaagaaccaaaagtgtaattaa 8425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14432215 - 14432145
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||| ||||||||||||||| || ||||||| ||||||||||||||||| |||| |||||||||||||||    
T  14432215 ttgttatattttaaaagggcaagaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaa 14432145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 40815817 - 40815887
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| |||||||||||||  | ||||||||||||||||||||||||| |||| |||||||||||||||    
T  40815817 ttgttctgttttaaaagggcattaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 40815887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 43058406 - 43058332
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcca 75  Q
    ||||||| |||||||| ||||||| |||||| |||||| ||||||||||| |||| |||||||||||||||||||    
T  43058406 ttgttctgttttaaaaaggcaggaccagtttagtgagttggccaaaacacgaggatcaaaagtgtaattaagcca 43058332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 239425 - 239353
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||| ||||| ||||||||||||||||||||||||| | || ||||||||||||||||||    
T  239425 ttgttctgttttaaaagg-caggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagcc 239353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7446415 - 7446342
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| || |||| ||||||| ||||||||| |||| ||||||||||||||||||    
T  7446415 ttgttctgttttaaaagggcaggaccaatttcatgagtagaccaaaacacgaggatcaaaagtgtaattaagcc 7446342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7446818 - 7446891
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| |||||||||||||| | |||||||| |||| ||||| ||||||||||||    
T  7446818 ttgttctgttttaaaagggcaggaccagtttcgtgagtaaggcaaaacacgaggatcaaaaatgtaattaagcc 7446891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 3025539 - 3025472
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaat 68  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||||||| |||| ||||| ||||||    
T  3025539 ttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaat 3025472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 35779781 - 35779706
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| |||||||| ||||||| || ||||||||||| | |||||||| |||| ||||||||||||||||||||    
T  35779781 ttgttctgttttaaaatggcaggaccattttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagccaa 35779706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 28847175 - 28847240
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||||| |||||| ||||||||||||||| ||||||||| |||| ||||| ||||||||||||    
T  28847175 ttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaaatgtaattaagcc 28847240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8425428 - 8425358
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| |||||||| || | || || |||||||||||||||||||||| |||| |||||||||||||||    
T  8425428 ttgttctgttttaaaaaggtaagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaa 8425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 14432616 - 14432684
Alignment:
Q  4 ttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    |||| |||||||| |||| || ||||||| ||||||||||||||||| |||| ||||| ||||||||||    
T  14432616 ttctgttttaaaatggcatgaccagtttcatgagtaggccaaaacacgaggaccaaaaatgtaattaag 14432684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 3025942 - 3026008
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    |||||||||||||| | || ||||||||||| |||||||||| |||| ||||| ||||||||||||||    
T  3025942 ttttaaaagggcagaaccaatttcgtgagtaagccaaaacacgaggaccaaaa-tgtaattaagccaa 3026008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 8972310 - 8972239
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||||| |||| |||||||| || || ||||||||| | |||||||||| |||| ||||||||||||||||    
T  8972310 ttgttctgttttgaaagggcatgaccattttcgtgagcatgccaaaacacgaggaccaaaagtgtaattaag 8972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 15552526 - 15552596
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||||| |||||||||||| ||| || |||||||||||||||||||||  | || ||||||||||||||||    
T  15552526 ttgttctgttttaaaagggc-ggatcattttcgtgagtaggccaaaacattatgaccaaaagtgtaattaag 15552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 15551564 - 15551501
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    |||||||| |||| || || |||||||||||  ||||||||| |||| ||||||||||||||||    
T  15551564 ttttaaaaaggcatgaccattttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 15551501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 1740 - 1667
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  1740 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacaggaggaccaaaagtgtaattaagcc 1667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 2139 - 2212
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  2139 ttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcc 2212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4866 - 4793
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  4866 ttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 4793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 5266 - 5334
Alignment:
Q  4 ttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    |||| |||||||||| || || ||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  5266 ttctgttttaaaaggacaagaccagtttcgtgactaggccaaaacacgaggaccaaaagtgtaattaag 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 1213 - 1288
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagccaa 76  Q
    ||||||| |||||||||||||||| |||||||||||||| |||||||||| ||||  |||||||||||||||||||    
T  1213 ttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggactaaaagtgtaattaagccaa 1288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 826 - 755
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaag 72  Q
    ||||||| |||||||||||||||| |||| |||||||||||||||||||| | || ||||||||||||||||    
T  826 ttgttctgttttaaaagggcaggaccagtatcgtgagtaggccaaaacacgaagaccaaaagtgtaattaag 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 11103 - 11169
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcca 75  Q
    |||||||||||||||| ||||||||| ||||||||||||||| |||| |||||||||||||||||||    
T  11103 ttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcca 11169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10694 - 10640
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccagga 55  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  10694 ttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgagga 10640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4679 - 4752
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||| |||||||||||||| |||||||||| | || ||||||||||||||||||    
T  4679 ttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaagaccaaaagtgtaattaagcc 4752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 61101 - 61028
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    |||||||||||||||| ||||||| || |||||||||||||||||||||| |||| |||||||||| |||||||    
T  61101 ttgttctattttaaaatggcaggatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaagcc 61028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 61930 - 62000
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||||||||||||||| |||| || |||||||||||| ||||||||| |||| |||||||||||||||    
T  61930 ttgttctattttaaaagggtaggaccattttcgtgagtagaccaaaacacgaggatcaaaagtgtaattaa 62000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 640 - 568
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagc 73  Q
    ||||||| ||||||||||||| || || |||||||||||||||||||||| |||| |||||||||||||||||    
T  640 ttgttctgttttaaaagggcatgatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 64777 - 64847
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| |||||||||||| ||| |||||||||||||| |||||||||| |||| |||||||||||||||    
T  64777 ttgttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaa 64847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 64375 - 64302
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||| ||||| |||||||||||||| | |||||||| |||| ||||||||||||||||||    
T  64375 ttgttctgttttaaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcc 64302  T

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Target: scaffold0019 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 134145 - 134218
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| | ||||||||||| ||  |||||||||||||||||||||||| |||| ||||||||||||||||||    
T  134145 ttgttctgtattaaaagggcatgactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 134218  T

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Target: scaffold0113 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 28715 - 28784
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaatta 70  Q
    ||||||| ||||||||||||| || ||||||||| ||||||||||||||| | || ||||||||||||||    
T  28715 ttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaatta 28784  T

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Target: scaffold0432 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10005 - 9935
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||||| ||||||||||| || ||||||||||| ||||| ||||||| |||| ||||| |||||||||    
T  10005 ttgttctatcttaaaagggcaagatcagtttcgtgaataggctaaaacacgaggaccaaaaatgtaattaa 9935  T

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Target: scaffold0432; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 10344 - 10414
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| ||||||||||| |  | ||||||||||||||| ||||||||| |||| |||||||||||||||    
T  10344 ttgttctgttttaaaagggaaacaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 10414  T

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Target: scaffold0027 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 42630 - 42703
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||| | ||||||| ||||||| ||||||||| |||  ||||||| ||||||||||    
T  42630 ttgttctgttttaaaagggcagaatcagtttcctgagtagaccaaaacacgaggnccaaaagtataattaagcc 42703  T

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Target: scaffold0027; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 42242 - 42172
Alignment:
Q  1 ttgttctattttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||| |||||||| ||||||| ||||||||||| ||| ||||||||| || |  ||||||||||||||    
T  42242 ttgttctgttttaaaatggcaggatcagtttcgtgattagaccaaaacacgagaactaaaagtgtaattaa 42172  T

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Target: scaffold0076 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 8489 - 8551
Alignment:
Q  9 ttttaaaagggcaggaacagtttcgtgagtaggccaaaacaccaggagcaaaagtgtaattaa 71  Q
    ||||||||||| |||| ||||||||| ||||| ||||||||  | || |||||||||||||||    
T  8489 ttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaattaa 8551  T

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