View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18054_high_42 (Length: 337)
Name: NF18054_high_42
Description: NF18054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18054_high_42 |
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Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 46417917 - 46417591
Alignment:
| Q |
1 |
ttctcttatactctctctcttcttcacaaccagtatataaatgcaccaccttctcatttctctctcacaactcaactgaagcattgcaacattggttcac |
100 |
Q |
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| T |
46417917 |
ttctcttatactctctctcttcttcacaaccagtatataaatgcaccaccttctcatttctctctcacaactcaactgaagcattgcaacattggttcac |
46417818 |
T |
|
| Q |
101 |
tcactgttgggtaggtcttgttggagaagcagggcacgtgcaatcgtagaactctctcaaacttcaatctcattttgcacgtgctccacttttccaactt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46417817 |
tcactgttgggtaggtcttgttggagaagcagggcacgtgcaaccgtagatctctctcaaacttcaatctcattttgcacgtgctccacttttccaactt |
46417718 |
T |
|
| Q |
201 |
gatcttcccaccatctttttatctaattggcataaactggttttggtaagataaggttaattttattttatatcctctccttttatttctaacgtataca |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |
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| T |
46417717 |
gatcttcccaccatctttttatctaattggcataaactggttttggtaagataaggttaattttattgtatatcctctccttttatttctaatgtataca |
46417618 |
T |
|
| Q |
301 |
ctttgttgtactgataatggtcctttg |
327 |
Q |
| |
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||||||||||||||||||||||||||| |
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| T |
46417617 |
ctttgttgtactgataatggtcctttg |
46417591 |
T |
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