View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18054_low_20 (Length: 440)

Name: NF18054_low_20
Description: NF18054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18054_low_20
NF18054_low_20
[»] chr6 (17 HSPs)
chr6 (34-430)||(13723150-13723543)
chr6 (169-330)||(19669997-19670157)
chr6 (174-321)||(30235763-30235907)
chr6 (127-243)||(16528179-16528296)
chr6 (197-310)||(9725588-9725700)
chr6 (130-257)||(26499310-26499438)
chr6 (184-315)||(17859878-17860009)
chr6 (183-319)||(15575530-15575663)
chr6 (183-311)||(30756221-30756353)
chr6 (200-249)||(32929934-32929983)
chr6 (159-225)||(1558324-1558390)
chr6 (174-311)||(9395996-9396134)
chr6 (131-247)||(13830369-13830489)
chr6 (159-257)||(15375997-15376095)
chr6 (183-249)||(16439932-16439998)
chr6 (183-311)||(16174753-16174882)
chr6 (34-99)||(13736496-13736563)
[»] chr1 (29 HSPs)
chr1 (98-314)||(11984619-11984835)
chr1 (98-321)||(11769393-11769616)
chr1 (98-356)||(34533129-34533388)
chr1 (125-330)||(50047613-50047820)
chr1 (105-314)||(52270619-52270831)
chr1 (101-330)||(23223880-23224108)
chr1 (105-319)||(21549154-21549367)
chr1 (164-330)||(30675992-30676157)
chr1 (98-413)||(18300339-18300656)
chr1 (131-274)||(14744884-14745028)
chr1 (197-302)||(19257374-19257479)
chr1 (154-257)||(15298327-15298430)
chr1 (162-249)||(25778300-25778387)
chr1 (159-311)||(25665189-25665341)
chr1 (183-249)||(26658074-26658139)
chr1 (165-274)||(23506343-23506452)
chr1 (159-311)||(31314106-31314258)
chr1 (183-301)||(9328582-9328699)
chr1 (183-319)||(12810744-12810879)
chr1 (183-311)||(23519139-23519266)
chr1 (183-301)||(9353545-9353662)
chr1 (183-319)||(15416431-15416569)
chr1 (187-276)||(26853758-26853846)
chr1 (197-301)||(9252077-9252180)
chr1 (162-217)||(25731041-25731096)
chr1 (209-319)||(30782294-30782403)
chr1 (98-189)||(25726187-25726279)
chr1 (98-189)||(25734595-25734687)
chr1 (370-414)||(34521654-34521698)
[»] chr2 (26 HSPs)
chr2 (125-405)||(9504440-9504721)
chr2 (125-405)||(9515806-9516087)
chr2 (96-352)||(27416622-27416877)
chr2 (125-311)||(21844226-21844411)
chr2 (126-311)||(21842597-21842783)
chr2 (130-319)||(25460457-25460641)
chr2 (130-249)||(17884028-17884148)
chr2 (183-314)||(14921488-14921618)
chr2 (185-319)||(25474591-25474724)
chr2 (161-272)||(18819242-18819353)
chr2 (105-414)||(21503878-21504187)
chr2 (185-310)||(41256774-41256898)
chr2 (188-314)||(20518659-20518784)
chr2 (183-249)||(30999354-30999420)
chr2 (197-276)||(1733700-1733778)
chr2 (185-310)||(18532942-18533066)
chr2 (185-302)||(24188595-24188712)
chr2 (162-249)||(18235776-18235862)
chr2 (207-302)||(35708374-35708468)
chr2 (198-310)||(16593180-16593291)
chr2 (202-311)||(21847865-21847975)
chr2 (201-319)||(27917437-27917555)
chr2 (105-178)||(27917557-27917632)
chr2 (215-310)||(23909064-23909158)
chr2 (183-226)||(29769689-29769732)
chr2 (214-286)||(19948946-19949017)
[»] chr3 (23 HSPs)
chr3 (98-330)||(19218576-19218809)
chr3 (98-390)||(19263209-19263502)
chr3 (162-319)||(14280683-14280840)
chr3 (156-310)||(8401807-8401961)
chr3 (130-319)||(18474733-18474925)
chr3 (159-291)||(10342317-10342449)
chr3 (105-311)||(11475362-11475569)
chr3 (167-314)||(22488268-22488414)
chr3 (196-290)||(28731049-28731143)
chr3 (192-319)||(26419343-26419471)
chr3 (105-308)||(2729000-2729200)
chr3 (159-314)||(19542490-19542645)
chr3 (105-319)||(21828593-21828810)
chr3 (174-321)||(27415694-27415840)
chr3 (174-263)||(18066245-18066334)
chr3 (174-266)||(21018176-21018268)
chr3 (197-276)||(21806100-21806176)
chr3 (340-423)||(25918573-25918656)
chr3 (197-319)||(11521777-11521898)
chr3 (192-249)||(25883651-25883708)
chr3 (183-266)||(21653958-21654042)
chr3 (164-225)||(28731152-28731212)
chr3 (174-319)||(33913997-33914140)
[»] chr4 (29 HSPs)
chr4 (127-321)||(26188280-26188474)
chr4 (163-319)||(29437987-29438143)
chr4 (134-311)||(10576993-10577172)
chr4 (161-295)||(31859313-31859447)
chr4 (108-302)||(19602284-19602480)
chr4 (183-247)||(12806423-12806487)
chr4 (183-319)||(17024322-17024457)
chr4 (172-295)||(5676765-5676888)
chr4 (185-319)||(9782494-9782627)
chr4 (130-302)||(18444736-18444907)
chr4 (162-311)||(39134190-39134339)
chr4 (183-307)||(1695310-1695433)
chr4 (159-302)||(4733264-4733407)
chr4 (156-309)||(7023630-7023784)
chr4 (212-311)||(9288538-9288637)
chr4 (183-249)||(47024215-47024281)
chr4 (183-319)||(51885211-51885347)
chr4 (183-263)||(15192812-15192891)
chr4 (201-284)||(21047790-21047873)
chr4 (185-310)||(24576923-24577045)
chr4 (174-244)||(18898565-18898635)
chr4 (183-319)||(10450874-10451010)
chr4 (183-272)||(25314683-25314772)
chr4 (183-311)||(33519616-33519744)
chr4 (187-249)||(17184088-17184150)
chr4 (130-311)||(22120194-22120376)
chr4 (206-319)||(20985007-20985120)
chr4 (183-310)||(12110732-12110858)
chr4 (186-311)||(27303311-27303434)
[»] chr7 (39 HSPs)
chr7 (98-282)||(4091918-4092103)
chr7 (166-295)||(5312196-5312325)
chr7 (100-314)||(3400325-3400543)
chr7 (105-319)||(24596389-24596605)
chr7 (164-330)||(20017547-20017712)
chr7 (183-310)||(21545260-21545385)
chr7 (186-300)||(23126710-23126823)
chr7 (201-302)||(11082144-11082242)
chr7 (201-405)||(23072921-23073126)
chr7 (197-311)||(26839604-26839717)
chr7 (130-249)||(5636736-5636857)
chr7 (183-247)||(7777558-7777622)
chr7 (183-319)||(21472365-21472500)
chr7 (191-302)||(2629937-2630047)
chr7 (162-313)||(9760664-9760815)
chr7 (130-295)||(22334702-22334869)
chr7 (208-314)||(30406182-30406288)
chr7 (183-311)||(7815892-7816019)
chr7 (197-276)||(315724-315802)
chr7 (197-319)||(9405254-9405375)
chr7 (183-405)||(20470083-20470306)
chr7 (183-311)||(7493863-7493990)
chr7 (105-192)||(7709948-7710035)
chr7 (130-225)||(9552676-9552773)
chr7 (191-321)||(20040216-20040345)
chr7 (197-247)||(20446811-20446861)
chr7 (162-225)||(9801106-9801169)
chr7 (162-237)||(17880418-17880493)
chr7 (159-225)||(15757985-15758051)
chr7 (202-314)||(21544291-21544400)
chr7 (185-286)||(7151461-7151561)
chr7 (202-319)||(21536942-21537059)
chr7 (188-311)||(11467482-11467605)
chr7 (183-246)||(18468189-18468252)
chr7 (202-319)||(7326379-7326497)
chr7 (185-223)||(9071010-9071048)
chr7 (201-302)||(18467111-18467213)
chr7 (191-321)||(20050369-20050498)
chr7 (123-152)||(26839749-26839778)
[»] scaffold0386 (2 HSPs)
scaffold0386 (105-295)||(11178-11369)
scaffold0386 (99-293)||(8150-8345)
[»] chr8 (29 HSPs)
chr8 (105-295)||(30850471-30850662)
chr8 (98-272)||(16051739-16051915)
chr8 (99-314)||(12957009-12957224)
chr8 (125-414)||(24120785-24121071)
chr8 (130-319)||(11437929-11438119)
chr8 (163-309)||(24927258-24927405)
chr8 (172-405)||(32239837-32240069)
chr8 (105-314)||(18771437-18771648)
chr8 (183-311)||(28900727-28900853)
chr8 (130-311)||(27084973-27085154)
chr8 (130-302)||(5154305-5154476)
chr8 (197-311)||(11308234-11308347)
chr8 (201-319)||(29046699-29046816)
chr8 (183-291)||(13304984-13305091)
chr8 (192-315)||(13583010-13583133)
chr8 (171-302)||(15213170-15213300)
chr8 (126-307)||(24094685-24094864)
chr8 (183-272)||(6887645-6887735)
chr8 (174-311)||(28259944-28260079)
chr8 (183-256)||(12774320-12774393)
chr8 (157-311)||(28075048-28075204)
chr8 (164-302)||(28290779-28290914)
chr8 (183-314)||(23876529-23876657)
chr8 (159-273)||(30544292-30544407)
chr8 (183-274)||(22892678-22892770)
chr8 (164-236)||(23893663-23893735)
chr8 (124-152)||(22892799-22892827)
chr8 (228-276)||(27118198-27118246)
chr8 (183-311)||(29292439-29292566)
[»] chr5 (26 HSPs)
chr5 (126-341)||(16622012-16622226)
chr5 (131-294)||(20695161-20695325)
chr5 (159-414)||(17381303-17381558)
chr5 (126-257)||(25594109-25594241)
chr5 (183-414)||(18451531-18451763)
chr5 (183-314)||(12265003-12265134)
chr5 (159-319)||(30791174-30791332)
chr5 (183-295)||(20084081-20084193)
chr5 (162-319)||(18281605-18281762)
chr5 (130-302)||(19763302-19763475)
chr5 (162-278)||(22930528-22930645)
chr5 (159-247)||(31340817-31340903)
chr5 (183-295)||(17028850-17028962)
chr5 (183-311)||(22230329-22230457)
chr5 (183-319)||(24268676-24268810)
chr5 (183-319)||(24345306-24345440)
chr5 (183-302)||(20715165-20715283)
chr5 (185-302)||(12339447-12339563)
chr5 (187-236)||(26329532-26329581)
chr5 (161-293)||(7742306-7742437)
chr5 (183-302)||(24131213-24131333)
chr5 (186-230)||(30072703-30072747)
chr5 (201-275)||(15694640-15694714)
chr5 (183-311)||(24842268-24842395)
chr5 (163-257)||(18178704-18178797)
chr5 (201-275)||(25945840-25945914)
[»] scaffold0650 (2 HSPs)
scaffold0650 (183-247)||(5201-5265)
scaffold0650 (124-152)||(5294-5322)
[»] scaffold0186 (1 HSPs)
scaffold0186 (161-313)||(33144-33296)
[»] scaffold0190 (1 HSPs)
scaffold0190 (130-319)||(11059-11250)
[»] scaffold0855 (1 HSPs)
scaffold0855 (183-311)||(2424-2551)
[»] scaffold0847 (1 HSPs)
scaffold0847 (183-311)||(2589-2716)
[»] scaffold0624 (1 HSPs)
scaffold0624 (198-309)||(4607-4717)
[»] scaffold0362 (1 HSPs)
scaffold0362 (183-286)||(8242-8344)
[»] scaffold0337 (1 HSPs)
scaffold0337 (160-301)||(3708-3849)
[»] scaffold0011 (1 HSPs)
scaffold0011 (164-220)||(227691-227747)
[»] scaffold0103 (1 HSPs)
scaffold0103 (183-313)||(36976-37106)
[»] scaffold0065 (1 HSPs)
scaffold0065 (160-311)||(12841-12992)
[»] scaffold0282 (1 HSPs)
scaffold0282 (185-311)||(22021-22146)
[»] scaffold0171 (1 HSPs)
scaffold0171 (100-175)||(21885-21960)
[»] scaffold0100 (1 HSPs)
scaffold0100 (183-246)||(37570-37633)


Alignment Details
Target: chr6 (Bit Score: 314; Significance: 1e-177; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 34 - 430
Target Start/End: Complemental strand, 13723543 - 13723150
Alignment:
Q  34 ctcatggaaacttatatttatactaagaaaagtaactatacaattctatctaaattataacagccacattcttattcattcaggaatccaacggttcaag 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || ||||||||||||||||    
T  13723543 ctcatggaaacttatatttatactaagaaaagtaactatacaattctatctaaattataactgccatattcttattcattaagaaatccaacggttcaag 13723444  T
Q  134 gcaagggtcaagcatcagaatccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtc 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||| ||| |||||||||||||||||||||||||||||||||    
T  13723443 gcaagggtcaagcatcagaatccatggcagaggatctccatcctccccctgt--tctgtagggtatatttttctattgttttgttatgatgtttgttgtc 13723346  T
Q  234 atgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatgaagtttttattaagttatcattttctttgt 333  Q
    ||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13723345 atgtgcaactaaatcaatttgatttgggttctacgatgaatccaatcttattttttggattctattaatgaagtttttattaagttatcattttc-ttgt 13723247  T
Q  334 gtctgattaattcgttcttgctttttcttaatacgctttcaattgagaatcagtatcaataatcttgaaaatcgatccgtacatattagtagaatta 430  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| ||| |||| ||||    
T  13723246 gtctgattaattcgttcttgctttttcttaatacgctttcaattgaaaatcagtaacagtaatcttgaaaatcgatccgtacaaatttgtaggatta 13723150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 169 - 330
Target Start/End: Complemental strand, 19670157 - 19669997
Alignment:
Q  169 ctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacg 268  Q
    ||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| |||||||||||| |||||||||||| |||| || || ||||| |    
T  19670157 ctccatcctccccctgttctctctagggtatgtttttatattattttgttatgatttttgttgtcatgagcaactaaacctctttgtttaggattctaag 19670058  T
Q  269 atgaacccaatcttattttttggattctattaatgaagtttttattaagttatcattttctt 330  Q
    ||||||||  | || ||| |||||||| |||||| ||||||| ||| | |||| ||||||||    
T  19670057 atgaaccc-ttattttttgttggattcgattaataaagttttcattcaattatgattttctt 19669997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 174 - 321
Target Start/End: Complemental strand, 30235907 - 30235763
Alignment:
Q  174 tcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaa 273  Q
    |||||| | ||||||||||||| |||||||||||||||||||   ||||||| ||||||| || |||||||||||  ||||||  |||||||| ||||||    
T  30235907 tcctcctcttgttctctctagggtatgtttttctattgtttt---atgatgtatgttgtcttgagcaactaaaccactttgatcagggttctaagatgaa 30235811  T
Q  274 cccaatcttattttttggattctattaatgaagtttttattaagttat 321  Q
    | || |||||||| ||| ||||||||||| |||||| |||||||||||    
T  30235810 ctcattcttatttgttgaattctattaataaagtttatattaagttat 30235763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 16528179 - 16528296
Alignment:
Q  127 gttcaaggcaagggtcaagcatcagaat-ccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgt 225  Q
    |||||||| |||||||||||||  || | ||| |||||||||||| |||||||| | ||||||||||||| ||||||||| |||||||||||||||||||    
T  16528179 gttcaaggaaagggtcaagcattggagttccaaggcagaggatcttcatcctcctcttgttctctctagggtatgtttttgtattgttttgttatgatgt 16528278  T
Q  226 ttgttgtcatgtgcaact 243  Q
     | |||||||||||||||    
T  16528279 ctattgtcatgtgcaact 16528296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 197 - 310
Target Start/End: Complemental strand, 9725700 - 9725588
Alignment:
Q  197 tatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattct 296  Q
    ||||||||||||||||||||||||||||| |||||||||| |||| |||||||  |||||| |||||| |||||||||||  |||||||| ||||| | |    
T  9725700 tatgtttttctattgttttgttatgatgtctgttgtcatgagcaattaaacct-cttgattagggttccacgatgaaccccttcttatttgttggaattt 9725602  T
Q  297 attaatgaagtttt 310  Q
    |||||  |||||||    
T  9725601 attaaaaaagtttt 9725588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 130 - 257
Target Start/End: Complemental strand, 26499438 - 26499310
Alignment:
Q  130 caaggcaagggtcaagcatcagaa-tccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttg 228  Q
    |||||||||||| ||||||||||  | || || | | |||||||||||||| | ||||||||||| | ||||||||| ||||| ||||| || |||||||    
T  26499438 caaggcaagggttaagcatcagatcttcaaggaaaatgatctccatcctcctcttgttctctctaaggtatgtttttatattgctttgtaattatgtttg 26499339  T
Q  229 ttgtcatgtgcaactaaacctatttgatt 257  Q
    |||||||||||||||||| || |||||||    
T  26499338 ttgtcatgtgcaactaaatctctttgatt 26499310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 315
Target Start/End: Complemental strand, 17860009 - 17859878
Alignment:
Q  184 gttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctta 283  Q
    ||||||| || | ||||||||||||||||||||| || || ||||||| |||||||||||||| || ||||||| | |||| | ||||||| |  |||||    
T  17860009 gttctctatatggtatgtttttctattgttttgtaatcatatttgttgccatgtgcaactaaaactctttgattagagttccaagatgaacaccttctta 17859910  T
Q  284 ttttttggattctattaatgaagtttttatta 315  Q
    ||| |||||||| |||||| ||||||| ||||    
T  17859909 tttgttggattcaattaataaagttttaatta 17859878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 319
Target Start/End: Original strand, 15575530 - 15575663
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    |||||||||| || |||||| |||||||||||| ||||||||||||||| |||| |||||||| |||  |||||| |||||| |||||||||||  ||||    
T  15575530 tgttctctcttgggtatgttattctattgttttcttatgatgtttgttgccatgagcaactaagcct-cttgattagggttccacgatgaaccccttctt 15575628  T
Q  283 attttttggattctattaatgaagtttttattaagtt 319  Q
    |   |||||| | ||||||| ||||||||||| ||||    
T  15575629 a--atttggaatttattaataaagtttttatttagtt 15575663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 311
Target Start/End: Original strand, 30756221 - 30756353
Alignment:
Q  183 tgttctctctaggatatgtttttct---attgttttgttatgatgtttgttgtcatgtgcaactaaacctat-ttgatttgggttctacgatgaacccaa 278  Q
    ||||||||||||  |||||||||||   |||||||||| ||||||| ||||||||||||||||||||||| | |||||| |||||| | ||| |||| |     
T  30756221 tgttctctctagtgtatgtttttcttgtattgttttgtaatgatgtatgttgtcatgtgcaactaaacctttcttgattagggttccaagataaacctat 30756320  T
Q  279 tcttattttttggattctattaatgaagttttt 311  Q
    | |||||| ||| |||| |||||| ||||||||    
T  30756321 ttttatttgttgtattcaattaataaagttttt 30756353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 32929983 - 32929934
Alignment:
Q  200 gtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacct 249  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||||||    
T  32929983 gtttttctattgttttgtaacgatgtttgttgtcatgtacaactaaacct 32929934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 1558390 - 1558324
Alignment:
Q  159 ggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgt 225  Q
    |||||||||||| |||| ||| | |||| |||||||||||| |||||||||| |||||| |||||||    
T  1558390 ggcagaggatcttcatcatcctcttgttatctctaggatatatttttctattattttgtaatgatgt 1558324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 311
Target Start/End: Complemental strand, 9396134 - 9395996
Alignment:
Q  174 tcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctat-ttgatttgggttctacgatga 272  Q
    |||||| | ||||||||  |||||||||||||| |||||||| | |||||||  |||| |||||| |||||||||| | ||||||  ||||| | |||||    
T  9396134 tcctcctcttgttctcttcaggatatgtttttcaattgttttataatgatgtcggttgccatgtgaaactaaacctctcttgattatggttccaagatga 9396035  T
Q  273 acccaatcttattttttggattctattaatgaagttttt 311  Q
    ||    ||||| || |||||||| |||||| ||||||||    
T  9396034 acatcttcttaattgttggattcgattaataaagttttt 9395996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 247
Target Start/End: Complemental strand, 13830489 - 13830369
Alignment:
Q  131 aaggcaagggtcaagcatcagaat-ccatggcagaggatctccatcctccccctgttctctctaggatatg---tttttctattgttttgttatgatgtt 226  Q
    |||||||||||||| ||| ||| | ||| || || ||||||||||||||| | ||||||||||||| ||||   ||||| |||| |||||| |||||||     
T  13830489 aaggcaagggtcaaacattagagttccaaggaaggggatctccatcctcctcttgttctctctagggtatgatttttttttattattttgtaatgatgta 13830390  T
Q  227 tgttgtcatgtgcaactaaac 247  Q
    ||||  |||||| ||||||||    
T  13830389 tgttaccatgtgtaactaaac 13830369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 257
Target Start/End: Original strand, 15375997 - 15376095
Alignment:
Q  159 ggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatt 257  Q
    |||||| |||||| ||||||  | ||||||||||||| |||||||||| |||||||||  |||||||| |||  ||||   |||||||||| |||||||    
T  15375997 ggcagacgatctcaatcctcaacttgttctctctagggtatgtttttcaattgttttgaaatgatgttggtttccatgccaaactaaacctctttgatt 15376095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 16439932 - 16439998
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacct 249  Q
    ||||||||| ||||||||||||| |||| |||||| || |||||||||| |||||| || |||||||    
T  16439932 tgttctctccaggatatgtttttatattattttgtaataatgtttgttgccatgtgaaattaaacct 16439998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 311
Target Start/End: Complemental strand, 16174882 - 16174753
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctat-ttgatttgggttctacgatgaacccaatct 281  Q
    ||||||||||| | ||| |||||||||| |||| | ||||||| ||||  |||||||||||||| || | |||||| || ||| |  |||| |||  |||    
T  16174882 tgttctctctacggtatatttttctattattttataatgatgtatgttaccatgtgcaactaaatctctcttgattaggattccaatatgacccctttct 16174783  T
Q  282 tattttttggattctattaatgaagttttt 311  Q
    ||||| |||||||| |||||| ||||||||    
T  16174782 tatttcttggattcaattaataaagttttt 16174753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 13736563 - 13736496
Alignment:
Q  34 ctcatggaaacttatatt--tatactaagaaaagtaactatacaattctatctaaattataacagcca 99  Q
    ||||||||||||| ||||  ||||||||| ||| ||||| |||||| ||||||||| |||||| ||||    
T  13736563 ctcatggaaacttctatttatatactaaggaaaataactgtacaatcctatctaaactataactgcca 13736496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 1e-54; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 98 - 314
Target Start/End: Complemental strand, 11984835 - 11984619
Alignment:
Q  98 cacattcttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaatccatggcagaggatctccatcctccccctgttctctctaggat 197  Q
    ||||||||||||||||||| || | |||||| ||||||||  ||||||||||||| |||| ||||||||||||||||||||| | ||||||||||| |||    
T  11984835 cacattcttattcattcagaaagctaacggtgcaaggcaaatgtcaagcatcagagtccaaggcagaggatctccatcctcctcttgttctctctaagat 11984736  T
Q  198 atgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattcta 297  Q
    || ||||||| ||||||||  ||||||| ||||| ||||||||||||||||| ||||||| |||||| | ||| |||||  |||||||| |||||||| |    
T  11984735 atatttttcttttgttttgcgatgatgtatgttgccatgtgcaactaaacctctttgattagggttcaaagataaaccccttcttatttgttggattcca 11984636  T
Q  298 ttaatgaagtttttatt 314  Q
    ||||| |||||||||||    
T  11984635 ttaattaagtttttatt 11984619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 98 - 321
Target Start/End: Complemental strand, 11769616 - 11769393
Alignment:
Q  98 cacattcttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaatccatggcagaggatctccatcctccccctgttctctctaggat 197  Q
    |||||||||||||||| || |||| |||||||||||||||| ||||||| ||||| | || || |||||||||||||||||| | | ||||||||| | |    
T  11769616 cacattcttattcatttagaaatctaacggttcaaggcaagagtcaagcttcagagtacaaggaagaggatctccatcctcctctttttctctctatggt 11769517  T
Q  198 atgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattcta 297  Q
     ||||||| ||||||||||||||||||  ||||  ||||||||||||||||| ||| ||| |||||||| |||||||||  |||||||| |||||||| |    
T  11769516 gtgtttttatattgttttgttatgatgaatgtttccatgtgcaactaaaccttttttattagggttctaagatgaaccccttcttatttgttggattcaa 11769417  T
Q  298 ttaatgaagtttttattaagttat 321  Q
    ||||| |||||| |||||||||||    
T  11769416 ttaataaagtttctattaagttat 11769393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 98 - 356
Target Start/End: Original strand, 34533129 - 34533388
Alignment:
Q  98 cacattcttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaatc-catggcagaggatctccatcctccccctgttctctctagga 196  Q
    |||||||||||||||| || || | ||| |||||| ||| ||||||||||||| | |  || || ||||||||| |||||||| | |||||||||||||     
T  34533129 cacattcttattcatttagaaaactaacagttcaatgcacgggtcaagcatcatagtttcaaggaagaggatcttcatcctcctcttgttctctctaggg 34533228  T
Q  197 tatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattct 296  Q
    |||||||||| ||||||||| |||||||||||| ||||||||||||||||||| ||||||| |||||||| |||| ||||  |||||||| ||||||||     
T  34533229 tatgtttttcgattgttttggtatgatgtttgtcgtcatgtgcaactaaacctctttgattagggttctaagatggaccccttcttatttgttggattca 34533328  T
Q  297 attaatgaagtttttattaagttatcattttctttgtgtctga-ttaattcgttcttgctt 356  Q
    |||||| || ||| |||| ||||||  ||||| ||||||| || |||||||||||||||||    
T  34533329 attaataaaatttatattcagttatgcttttc-ttgtgtccgatttaattcgttcttgctt 34533388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 125 - 330
Target Start/End: Original strand, 50047613 - 50047820
Alignment:
Q  125 cggttcaaggcaagggtcaagcatcagaat-ccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgat 223  Q
    ||||| |||||||||||||| ||| ||| | ||| || || ||||||||||||||| | ||||||||||||| ||||||||| ||||||||||| |||||    
T  50047613 cggtttaaggcaagggtcaaacattagagttccaaggaaggggatctccatcctcctcttgttctctctagggtatgtttttatattgttttgtaatgat 50047712  T
Q  224 gttt-gttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatgaagtttttattaagttatc 322  Q
    |||| |||| |||| |||||||||||| ||||||| | ||| || |||||||||  |||||||| |||||||| |||||| |||||| |||| ||||||     
T  50047713 gttttgttgccatgagcaactaaacctctttgattagagttataagatgaaccccttcttatttgttggattcaattaataaagtttctatttagttatg 50047812  T
Q  323 attttctt 330  Q
    ||||||||    
T  50047813 attttctt 50047820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 105 - 314
Target Start/End: Complemental strand, 52270831 - 52270619
Alignment:
Q  105 ttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaatc--catggcagaggatctccatcctccccctgttctctctaggatatgtt 202  Q
    |||||||||||| || | | |||| ||||||||||| |||||||||| | |  || |||| ||||||| |||||||| | ||||||||||||   |||||    
T  52270831 ttattcattcagaaagctagcggtacaaggcaagggccaagcatcaggagcttcacggcaaaggatcttcatcctcctcttgttctctctagatgatgtt 52270732  T
Q  203 tttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaa-cccaatcttattttttggattctattaa 301  Q
    ||||||||||||||| |||||||  |||| |||| | |||||||| ||||||||| |||||| |||||||| |||  |||||||||||||||||| ||||    
T  52270731 tttctattgttttgtaatgatgtcggttgccatgagaaactaaacttatttgattagggttccacgatgaacccccttcttattttttggattcttttaa 52270632  T
Q  302 tgaagtttttatt 314  Q
    | |||||||||||    
T  52270631 taaagtttttatt 52270619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 101 - 330
Target Start/End: Original strand, 23223880 - 23224108
Alignment:
Q  101 attcttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaat-ccatggcagaggatctccatcctccccctgttctctctaggatat 199  Q
    |||||||||||||||| || | |  | |||| || ||||||||||||||||| | ||| |||||||||||| |||||||| |  |||||||  ||| |||    
T  23223880 attcttattcattcagaaagctagtgattcacggaaagggtcaagcatcagagttccaaggcagaggatcttcatcctcctctagttctct--agggtat 23223977  T
Q  200 gtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctatt 299  Q
    |||||||||||||||||| ||||||| |||||||||| | || ||||||| |||||||||||||||| |||||||||  |||||| | ||| ||||  ||    
T  23223978 gtttttctattgttttgtaatgatgtatgttgtcatgcggaaataaacctctttgatttgggttctaagatgaaccccttcttatatgttgcattcagtt 23224077  T
Q  300 aatgaagtttttattaagttatcattttctt 330  Q
    ||| |||||| |||| ||||||  |||||||    
T  23224078 aataaagtttctattcagttatgcttttctt 23224108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 105 - 319
Target Start/End: Original strand, 21549154 - 21549367
Alignment:
Q  105 ttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaatc--catggcagaggatctccatcctccccctgttctctctaggatatgtt 202  Q
    |||||||||||  |||| | | || |||| ||| ||||||||||||| |||  || ||||||||||||||||||||| | ||||||||||||| ||||||    
T  21549154 ttattcattcaaaaatctagcagtacaagtcaatggtcaagcatcaggatcttcaaggcagaggatctccatcctcctcttgttctctctagggtatgtt 21549253  T
Q  203 tttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaat 302  Q
    ||||||||||||||| |||||||  | |||||||  |||||||| || ||   || |||||| |||||||| ||  |||||||| |||||||||||||||    
T  21549254 tttctattgttttgtaatgatgtcggctgtcatgaacaactaaatctctt---ttagggttccacgatgaaacccttcttatttgttggattctattaat 21549350  T
Q  303 gaagtttttattaagtt 319  Q
      |||||||||| ||||    
T  21549351 acagtttttattcagtt 21549367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 164 - 330
Target Start/End: Original strand, 30675992 - 30676157
Alignment:
Q  164 aggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggtt 263  Q
    |||||||||||||||| | |  |||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||| || ||  ||||||  ||||    
T  30675992 aggatctccatcctcctcttagtctctctagggtatgtttttctattgttttgttatgatgtttgttgccatgagcaacttaa-cttcttgattaaggtt 30676090  T
Q  264 ctacgatgaacccaatcttattttttggattctattaatgaagtttttattaagttatcattttctt 330  Q
    | | |||||||||  |||||||| |||||||| |||||| ||||||| ||| ||||||  |||||||    
T  30676091 cgaagatgaaccccttcttatttgttggattcaattaataaagttttcattcagttatgcttttctt 30676157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 98 - 413
Target Start/End: Complemental strand, 18300656 - 18300339
Alignment:
Q  98 cacattcttattcattcaggaatccaacggttcaaggcaagggtcaagcatcaga-atccatggcagaggatctccatcctccccctgttctctctagga 196  Q
    |||||| || || |||||| || ||||||||||||| |||||||||||||||| |  |||| |||  ||||||| |||||| ||  ||||||||| ||||    
T  18300656 cacattattttttattcagaaagccaacggttcaagccaagggtcaagcatcaaagttccaaggc--aggatcttcatccttccattgttctctccagga 18300559  T
Q  197 tatgtttttctattgttttgttatgatgtttgttgtcatg-tgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattc 295  Q
      ||||||||||||||||||||||||||| ||||| ||||    ||||||| || |||| || |||||||| |||||||||  |||||||| ||| ||||    
T  18300558 cttgtttttctattgttttgttatgatgtatgttgccatgaaaaaactaaaactctttgcttagggttctaagatgaaccccttcttatttgttgaattc 18300459  T
Q  296 ta-ttaatgaagtttttattaagttatcattttctttgtgtctgatt--aattcgttcttgctttttcttaatacgctttcaattgagaatcagtatcaa 392  Q
     | ||||| ||||||| ||| ||||||  ||||| ||| |||  |||  ||||||| ||||  | |||||||| |  |||||||| |||||| | ||| |    
T  18300458 aatttaataaagttttcattcagttatgtttttc-ttgggtccaatttaaattcgtacttgtatgttcttaatgctttttcaatttagaatctgcatcga 18300360  T
Q  393 taatcttgaaaatcgatccgt 413  Q
    ||||||||||||| |||||||    
T  18300359 taatcttgaaaattgatccgt 18300339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 131 - 274
Target Start/End: Complemental strand, 14745028 - 14744884
Alignment:
Q  131 aaggcaagggtcaagcatcagaa-tccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgt 229  Q
    ||||||||||||||||||| ||  | || | |||| ||||| |||||||  | ||||||||||| ||||||||||||||||||||||| |||||||  ||    
T  14745028 aaggcaagggtcaagcatctgagcttcaagacagatgatctgcatcctcttcttgttctctctatgatatgtttttctattgttttgtaatgatgtcggt 14744929  T
Q  230 tgtcatgtgcaactaaacctatttgatttgggttctacgatgaac 274  Q
    |||||||||||||||||||| ||||| | |||||| | |||||||    
T  14744928 tgtcatgtgcaactaaacctctttgactagggttccaagatgaac 14744884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 197 - 302
Target Start/End: Complemental strand, 19257479 - 19257374
Alignment:
Q  197 tatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattct 296  Q
    ||||||||||||||||||||| |||||||  ||||||||| |||||||||||| ||||||| |||||| | |||||||||  |||||||| ||||||||     
T  19257479 tatgtttttctattgttttgtaatgatgtcggttgtcatgagcaactaaacctctttgattagggttccaagatgaaccccttcttatttgttggattca 19257380  T
Q  297 attaat 302  Q
    ||||||    
T  19257379 attaat 19257374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 154 - 257
Target Start/End: Complemental strand, 15298430 - 15298327
Alignment:
Q  154 tccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctattt 253  Q
    |||| |||||||||| | || ||||| | ||||||||||||| |||| |||||| ||||||||| ||||||| |||| |||||||||||||||||| |||    
T  15298430 tccaaggcagaggatattcaccctcctcttgttctctctagggtatgcttttcttttgttttgtaatgatgtatgttatcatgtgcaactaaacctcttt 15298331  T
Q  254 gatt 257  Q
    ||||    
T  15298330 gatt 15298327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 162 - 249
Target Start/End: Original strand, 25778300 - 25778387
Alignment:
Q  162 agaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacct 249  Q
    |||| ||||||||||||| |  |||||||||||| ||||||||||||||||||||| ||||| |||||||| |||||||| |||||||    
T  25778300 agagcatctccatcctcctctcgttctctctagggtatgtttttctattgttttgtaatgatatttgttgttatgtgcaattaaacct 25778387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 311
Target Start/End: Complemental strand, 25665341 - 25665189
Alignment:
Q  159 ggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgtta-tgatgtttgttgtcatgtgcaactaaacctatttgatt 257  Q
    |||||| |||||||||||||| | |||||||||||||||||||||| ||||| | || ||| ||||||| |||  | |  |||||||||||| |||||||    
T  25665341 ggcagatgatctccatcctcctcttgttctctctaggatatgtttt-ctattttgtttttaatgatgttggtttcctttagcaactaaacctctttgatt 25665243  T
Q  258 tgggttctacgatgaacccaatcttattttttggattctattaatgaagttttt 311  Q
      ||||| |||||||||||  |||||||| ||| |||||||| || ||||||||    
T  25665242 aaggttccacgatgaaccccttcttatttgttgaattctattgataaagttttt 25665189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 26658074 - 26658139
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacct 249  Q
    ||||||||||||| ||||||||| |||||||||||| ||||||||||||||||| ||||||||||||    
T  26658074 tgttctctctagggtatgttttt-tattgttttgttgtgatgtttgttgtcatgagcaactaaacct 26658139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 274
Target Start/End: Original strand, 23506343 - 23506452
Alignment:
Q  165 ggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttc 264  Q
    ||||||||||||||| | | ||||||||||   |||||||||||||||||||| |||||||| || || |||||||||||||| | ||| ||| ||||||    
T  23506343 ggatctccatcctcctcttattctctctagagaatgtttttctattgttttgtaatgatgttcgtagttatgtgcaactaaacatcttttattagggttc 23506442  T
Q  265 tacgatgaac 274  Q
     || ||||||    
T  23506443 cacaatgaac 23506452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 159 - 311
Target Start/End: Original strand, 31314106 - 31314258
Alignment:
Q  159 ggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctat-ttgatt 257  Q
    |||||||||||||||||| |  | ||||||||||| | | ||||||||||||| ||||| |||||||||||| ||||||| || ||||||| | ||||||    
T  31314106 ggcagaggatctccatccccatcttgttctctctatggtttgtttttctattg-tttgtaatgatgtttgttttcatgtgaaaataaacctctcttgatt 31314204  T
Q  258 tgggttctacgatgaacccaatcttattttttggattctattaatgaagttttt 311  Q
     |||||| | ||||| ||   |||| ||| |||||||| |||||| ||||||||    
T  31314205 agggttccaagatgagcctcttcttgtttgttggattcaattaataaagttttt 31314258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 301
Target Start/End: Original strand, 9328582 - 9328699
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    ||||| || |||| |||||||||||||||||||||| |||||| | ||  |||| |||||||||||| |||||||  || || | |||||||||  ||||    
T  9328582 tgttccctatagggtatgtttttctattgttttgttgtgatgtatatttccatgagcaactaaacct-tttgattatggctcgaagatgaaccctttctt 9328680  T
Q  283 attttttggattctattaa 301  Q
    |||| ||||||||||||||    
T  9328681 atttgttggattctattaa 9328699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 319
Target Start/End: Original strand, 12810744 - 12810879
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    |||||||| |||| |||| ||||||||| ||||||||||| |||||||| |||| ||||| ||||||  |||||| |||||| | ||||||| |  ||||    
T  12810744 tgttctctttagggtatgcttttctattattttgttatgacgtttgttgccatgagcaacaaaacct-cttgattagggttccatgatgaactccttctt 12810842  T
Q  283 attttttggattctattaatgaagtttttattaagtt 319  Q
    |||| ||||||   |||||| ||||||| ||| ||||    
T  12810843 atttgttggatataattaataaagttttcattcagtt 12810879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 311
Target Start/End: Complemental strand, 23519266 - 23519139
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    |||||||| |||  ||||||||||||||||||||||||||||||||||  |||| | ||||||||||  || |||  ||||||| | |||||||  ||||    
T  23519266 tgttctctttagactatgtttttctattgttttgttatgatgtttgttaccatgagaaactaaacct-cttaattatggttctaaggtgaaccctttctt 23519168  T
Q  283 attttttggattctattaatgaagttttt 311  Q
    |||| || |||  ||||||| ||||||||    
T  23519167 atttgtttgatcttattaataaagttttt 23519139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 183 - 301
Target Start/End: Original strand, 9353545 - 9353662
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    ||||| || |||| |||||||||||||||||||||| |||||| | ||  |||| |||||||||||| |||||||  || || | |||||||||  ||||    
T  9353545 tgttccctttagggtatgtttttctattgttttgttgtgatgtatatttccatgagcaactaaacct-tttgattgtggctcgaagatgaaccctttctt 9353643  T
Q  283 attttttggattctattaa 301  Q
    |||| ||| ||||||||||    
T  9353644 atttgttgaattctattaa 9353662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 183 - 319
Target Start/End: Complemental strand, 15416569 - 15416431
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctat-ttgatttgggttctacgatgaacccaatct 281  Q
    ||||||||||  | ||||||||||| ||||||||| | |||||  ||||||||||| |||||||||| | || ||| |||||| ||||||||||    ||    
T  15416569 tgttctctctttggtatgtttttctcttgttttgtaaagatgtcggttgtcatgtgtaactaaacctctattaattagggttccacgatgaacctctact 15416470  T
Q  282 tattttttggattctattaatgaagtttt-tattaagtt 319  Q
    ||||| |||||||| | |||| ||||||| |||||||||    
T  15416469 tatttgttggattcaactaataaagttttctattaagtt 15416431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 26853846 - 26853758
Alignment:
Q  187 ctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaaccc 276  Q
    ||||||||  ||||||||| ||||||||| | ||||| | ||||| ||||||||| ||||||| |||||||  |||||||||||||||||    
T  26853846 ctctctagagtatgtttttatattgttttataatgatctatgttg-catgtgcaagtaaacctctttgattatggttctacgatgaaccc 26853758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 301
Target Start/End: Complemental strand, 9252180 - 9252077
Alignment:
Q  197 tatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattct 296  Q
    ||||||||||||||||||| ||  ||||| ||||  |||| ||||||||||||  ||||||||||||  | |||||||||  |||||||| ||||||| |    
T  9252180 tatgtttttctattgtttttttgagatgtctgtttccatgagcaactaaacct-cttgatttgggtttgaagatgaaccccttcttatttgttggatttt 9252082  T
Q  297 attaa 301  Q
    |||||    
T  9252081 attaa 9252077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 25731041 - 25731096
Alignment:
Q  162 agaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgt 217  Q
    ||||||||| |||||||| || |||||||||||| ||||||||| |||||||||||    
T  25731041 agaggatcttcatcctcctcccgttctctctagggtatgtttttatattgttttgt 25731096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 30782294 - 30782403
Alignment:
Q  209 ttgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatgaagtt 308  Q
    |||||||||||| |||| |||||||||| |||||||||| |  ||||||  ||||| | ||||| |||  |||||||| ||||| | ||||||| |||||    
T  30782294 ttgttttgttattatgtatgttgtcatgagcaactaaacat-cttgattaaggttccaggatgagccccttcttatttgttggaatttattaataaagtt 30782392  T
Q  309 tttattaagtt 319  Q
    |||||| ||||    
T  30782393 tttattcagtt 30782403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 25726279 - 25726187
Alignment:
Q  98 cacattcttattcattcaggaatccaacggttcaaggcaagggtcaagcatcaga-atccatggcagaggatctccatcctccccctgttctc 189  Q
    |||||| |||||||||||| || | | |||||||||  | ||||||||||||| |  |||| |||| |||||||||||||||| | |||||||    
T  25726279 cacattattattcattcagaaagctagcggttcaagataggggtcaagcatcaaagttccaaggcaaaggatctccatcctcctcttgttctc 25726187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 25734687 - 25734595
Alignment:
Q  98 cacattcttattcattcaggaatccaacggttcaaggcaagggtcaagcatcaga-atccatggcagaggatctccatcctccccctgttctc 189  Q
    |||||| |||||||||||| || | | |||||||||  | ||||||||||||| |  |||| |||| |||||||||||||||| | |||||||    
T  25734687 cacattattattcattcagaaagctagcggttcaagataggggtcaagcatcaaagttccaaggcaaaggatctccatcctcctcttgttctc 25734595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 414
Target Start/End: Original strand, 34521654 - 34521698
Alignment:
Q  370 tttcaattgagaatcagtatcaataatcttgaaaatcgatccgta 414  Q
    |||||| |||||||| ||||| |||||||||||||| ||||||||    
T  34521654 tttcaagtgagaatccgtatcgataatcttgaaaattgatccgta 34521698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 4e-51; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 125 - 405
Target Start/End: Original strand, 9504440 - 9504721
Alignment:
Q  125 cggttcaaggcaagggtcaagcatcagaatccatggcagaggatctccatcctccccctgttctctctaggatatgttttt-ctattgttttgttatgat 223  Q
    |||||||||||| ||||||| ||||||| |||| || |||||||||||||||||| | ||||||||||||| ||||||||| | ||||||||||||||||    
T  9504440 cggttcaaggcaggggtcaaacatcagagtccaaggaagaggatctccatcctcctcttgttctctctagggtatgttttttccattgttttgttatgat 9504539  T
Q  224 gtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatgaagtttttattaagttatca 323  Q
    |||||||| ||||| ||||||||||| |||||||  ||||||| |||||| ||  |||||||| |||||||| |||||  ||||||||||| ||||||      
T  9504540 gtttgttgccatgtacaactaaacctctttgattatggttctaagatgaatcccttcttatttgttggattccattaacaaagtttttattcagttatgt 9504639  T
Q  324 ttttctttgtgtctga-ttaattcgttcttgctttttcttaatacgctttcaattgagaatcagtatcaataatcttgaaaat 405  Q
    ||||| ||||||| || |||||| ||| |||| | | |||||| |  ||||||||||||||| || ||  ||||||| |||||    
T  9504640 ttttc-ttgtgtccgatttaatttgtttttgcatgtacttaatgctttttcaattgagaatccgtgtcggtaatctttaaaat 9504721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 125 - 405
Target Start/End: Original strand, 9515806 - 9516087
Alignment:
Q  125 cggttcaaggcaagggtcaagcatcagaatccatggcagaggatctccatcctccccctgttctctctaggatatgttttt-ctattgttttgttatgat 223  Q
    |||||||||||| ||||||| ||||||| |||| || |||||||||||||||||| | ||||||||||||| ||||||||| | ||||||||||||||||    
T  9515806 cggttcaaggcaggggtcaaacatcagagtccaaggaagaggatctccatcctcctcttgttctctctagggtatgttttttccattgttttgttatgat 9515905  T
Q  224 gtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatgaagtttttattaagttatca 323  Q
    |||||||| ||||| ||||||||||| |||||||  ||||||| |||||| ||  |||||||| |||||||| |||||  ||||||||||| ||||||      
T  9515906 gtttgttgccatgtacaactaaacctctttgattatggttctaagatgaatcccttcttatttgttggattccattaacaaagtttttattcagttatgt 9516005  T
Q  324 ttttctttgtgtctga-ttaattcgttcttgctttttcttaatacgctttcaattgagaatcagtatcaataatcttgaaaat 405  Q
    ||||| ||||||| || |||||| ||| |||| | | |||||| |  ||||||||||||||| || ||  ||||||| |||||    
T  9516006 ttttc-ttgtgtccgatttaatttgtttttgcatgtacttaatgctttttcaattgagaatccgtgtcggtaatctttaaaat 9516087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 96 - 352
Target Start/End: Complemental strand, 27416877 - 27416622
Alignment:
Q  96 gccacattcttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaatccatggcagaggatctccatcctccccctgttctctctagg 195  Q
    ||||||||||||||||||||  ||||||| |||| ||||||||| ||| |||| ||| |||| ||||||||||||||||||||| | ||||||||||  |    
T  27416877 gccacattcttattcattcataaatccaatggttgaaggcaaggatcaggcattagagtccaaggcagaggatctccatcctcctcttgttctctctgag 27416778  T
Q  196 atatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattc 295  Q
     |||| ||||||||||||||| ||| |||||||||| | ||||  |||||||||  |||||| |||||| |  ||||||||  | |||||| ||||||||    
T  27416777 gtatgcttttctattgttttggtataatgtttgttgccgtgtgacactaaacct-cttgattagggttccaatatgaaccccttattatttgttggattc 27416679  T
Q  296 tattaatgaagtttttattaagttatcattttctttgtgtctga-ttaattcgttctt 352  Q
     ||| || |||||| |||| |||||| |||||| ||||||| || |||||||||||||    
T  27416678 aatttataaagtttctattgagttatgattttc-ttgtgtccgatttaattcgttctt 27416622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 125 - 311
Target Start/End: Complemental strand, 21844411 - 21844226
Alignment:
Q  125 cggttcaaggcaagggtcaagcatcagaa-tccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgat 223  Q
    |||||||||||| |||||||||||||||  | || |||||||||| | ||| |||| |  ||||||| |||| | |||||||||  |||||||| |||||    
T  21844411 cggttcaaggcatgggtcaagcatcagagcttcaaggcagaggatttacatgctcctctcgttctctttagggtttgtttttct--tgttttgtaatgat 21844314  T
Q  224 gtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatgaagttttt 311  Q
    || ||||| ||||| ||||||||||| ||||||| |||||| | ||||||| || |||||||| |||||||| |||||| ||||||||    
T  21844313 gtatgttgccatgtacaactaaacctctttgattagggttccaagatgaactcattcttatttgttggattcaattaataaagttttt 21844226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 126 - 311
Target Start/End: Complemental strand, 21842783 - 21842597
Alignment:
Q  126 ggttcaaggcaagggtcaagcatcagaa-tccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatg 224  Q
    ||||||||||| || ||||||||||||  | || |||||| ||| | ||| |||| |  ||||||| |||| |||| |||| ||||||||||| ||||||    
T  21842783 ggttcaaggcatggttcaagcatcagagcttcaaggcagatgatttacatgctcctctcgttctctttagggtatgcttttatattgttttgtaatgatg 21842684  T
Q  225 tttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatgaagttttt 311  Q
    | ||||| ||||| ||||||||||| ||||||| |||||| | ||||||| || |||||||| |||||||| |||||| ||||||||    
T  21842683 tatgttgccatgtacaactaaacctctttgattagggttccaagatgaactcattcttatttgttggattcaattaataaagttttt 21842597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 130 - 319
Target Start/End: Original strand, 25460457 - 25460641
Alignment:
Q  130 caaggcaagggtcaagcatcagaatccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgt 229  Q
    ||||||||||||||| |||||| |     |||| ||||| |||| | ||| | ||||||||||||  ||||||||||||||||||||| ||||| ||  |    
T  25460457 caaggcaagggtcaaacatcagga-----ggcaaaggatatccaccatcctcttgttctctctagtgtatgtttttctattgttttgtaatgattttgat 25460551  T
Q  230 tgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatgaagtttttattaagtt 319  Q
    | ||||| |||||||||||||||||||| | |||  ||||||||  |  |||||||| || |||||||||||| ||||||||||| ||||    
T  25460552 tttcatgcgcaactaaacctatttgattagagtttcacgatgaatacgttcttatttgttagattctattaataaagtttttatttagtt 25460641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 130 - 249
Target Start/End: Complemental strand, 17884148 - 17884028
Alignment:
Q  130 caaggcaagggtcaagcatcaga-atccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttg 228  Q
    ||||||||||||||||||||||| || || |||||||||| ||  || ||| | ||| || |||||| ||||||||||||||||||||| |||||||| |    
T  17884148 caaggcaagggtcaagcatcagagattcaaggcagaggatttctgtcatcctcttgtcctttctagggtatgtttttctattgttttgtaatgatgttgg 17884049  T
Q  229 ttgtcatgtgcaactaaacct 249  Q
    ||| |||||||||||||||||    
T  17884048 ttgccatgtgcaactaaacct 17884028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 183 - 314
Target Start/End: Complemental strand, 14921618 - 14921488
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    ||||||||||||| |||||||||| |||||||||| |||||||  |||| |||| ||||| |||||| || |||| ||||||  ||||||| ||  ||||    
T  14921618 tgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttctt 14921520  T
Q  283 attttttggattctattaatgaagtttttatt 314  Q
    |||| ||||||||||||||| |||||||||||    
T  14921519 atttgttggattctattaataaagtttttatt 14921488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 185 - 319
Target Start/End: Original strand, 25474591 - 25474724
Alignment:
Q  185 ttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttat 284  Q
    |||| |||||| ||| ||||||||||||||||||||||||| ||||| |||| ||||||||||||  ||||||  ||||| |||||||||||  ||||||    
T  25474591 ttctttctagggtatctttttctattgttttgttatgatgtctgttgccatgagcaactaaacct-cttgattatggttccacgatgaaccccttcttat 25474689  T
Q  285 tttttggattctattaatgaagtttttattaagtt 319  Q
    || ||| | | ||||||| ||||||| ||||||||    
T  25474690 ttgttgaaatttattaataaagttttcattaagtt 25474724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 161 - 272
Target Start/End: Original strand, 18819242 - 18819353
Alignment:
Q  161 cagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgg 260  Q
    ||||||||||| ||||||| | ||||||  ||||| ||||||||||||||||||||| ||||||   ||||||||| ||||||| |||| ||||||| ||    
T  18819242 cagaggatctctatcctcctcttgttcttactagggtatgtttttctattgttttgtaatgatgacggttgtcatgagcaactagacctctttgattagg 18819341  T
Q  261 gttctacgatga 272  Q
    |||| |||||||    
T  18819342 gttccacgatga 18819353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 414
Target Start/End: Complemental strand, 21504187 - 21503878
Alignment:
Q  105 ttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaat-ccatggcagaggatctccatcctccccctgttctctctaggatatgttt 203  Q
    ||||||||| || || | || ||||||||| || |||||||||||| | | ||| || ||| ||||| ||||||||   ||||| |||||   |||||||    
T  21504187 ttattcatttagaaagctaatggttcaaggaaaaggtcaagcatcaaagttccaaggtagatgatcttcatcctcctattgttcactctaaagtatgttt 21504088  T
Q  204 ttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatg 303  Q
    ||||||| |||| | ||||||||||||||| || |||||||||||| ||||||  || ||| | |||||||||  ||||||||  ||||||| ||||||     
T  21504087 ttctattattttataatgatgtttgttgtcgtgagcaactaaacctttttgatcaggattccaagatgaaccctttcttatttgatggattcaattaata 21503988  T
Q  304 aagtttttattaagttatcattttctttgtgtctga-ttaattcgttcttgctttttcttaatacgctttcaattgagaatcagtatcaataatcttgaa 402  Q
    ||| ||||||| ||||||  ||||| ||||||| || |||||| || ||||  |  |||||||    |||||| ||||||||  ||| | ||||||||||    
T  21503987 aag-ttttatttagttatgcttttc-ttgtgtccgatttaatttgtacttgtctgatcttaatgatgtttcaactgagaatctatattagtaatcttgaa 21503890  T
Q  403 aatcgatccgta 414  Q
    ||| ||||||||    
T  21503889 aattgatccgta 21503878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 310
Target Start/End: Complemental strand, 41256898 - 41256774
Alignment:
Q  185 ttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttat 284  Q
    |||||||| |||||||||||||||||||||| ||||||| | ||||||  || |||| |||||||  |||||| |||||| |||||||||||  ||||||    
T  41256898 ttctctctcggatatgtttttctattgttttcttatgatatatgttgttgtgagcaattaaacct-cttgattagggttccacgatgaaccctttcttat 41256800  T
Q  285 tttttggattctattaatgaagtttt 310  Q
    || ||||| | ||||||| |||||||    
T  41256799 ttgttggaatttattaataaagtttt 41256774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 188 - 314
Target Start/End: Complemental strand, 20518784 - 20518659
Alignment:
Q  188 tctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttatttt 287  Q
    |||||| | |||| ||||||||| |||||| |||||||| ||   |||| ||||||||||||  |||||| ||||||||||||||||||  ||||| |||    
T  20518784 tctctaaggtatgcttttctattattttgtaatgatgttggtgtccatgagcaactaaacctccttgattagggttctacgatgaaccccttctta-ttt 20518686  T
Q  288 ttggattctattaatgaagtttttatt 314  Q
    ||||| || |||||| |||||||||||    
T  20518685 ttggaatcaattaataaagtttttatt 20518659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 30999354 - 30999420
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacct 249  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| | ||||||||||    
T  30999354 tgttctctctagggtatgtttttctattgttttcttatgatgtttgttgccatgagaaactaaacct 30999420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 1733700 - 1733778
Alignment:
Q  197 tatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaaccc 276  Q
    ||||||||||| ||||||||||||||||| |||||||||| ||||||||||||  |||||| |||||  |||||||||||    
T  1733700 tatgtttttcttttgttttgttatgatgtatgttgtcatgagcaactaaacct-cttgattagggtttcacgatgaaccc 1733778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 310
Target Start/End: Complemental strand, 18533066 - 18532942
Alignment:
Q  185 ttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttat 284  Q
    |||| |||||| ||| ||||||| ||||||||||||||||| | ||| |||| |||||||||||| ||| ||| |||||| ||||| |||||  ||||||    
T  18533066 ttctgtctagggtatatttttcttttgttttgttatgatgtctattgccatgagcaactaaacctcttt-attagggttccacgataaaccccttcttat 18532968  T
Q  285 tttttggattctattaatgaagtttt 310  Q
    || ||| | | ||||||| |||||||    
T  18532967 ttgttgaaatttattaataaagtttt 18532942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 302
Target Start/End: Original strand, 24188595 - 24188712
Alignment:
Q  185 ttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttat 284  Q
    ||||||||||| | |||||||||||| |||||  |||| ||  |||| |||| |||||||||||| |||||||  ||||| | ||||||| |  ||||||    
T  24188595 ttctctctagggtgtgtttttctattattttgagatgacgtcggttgccatgagcaactaaacctgtttgattaaggttccatgatgaactccttcttat 24188694  T
Q  285 tttttggattctattaat 302  Q
    || |||||||||||||||    
T  24188695 ttgttggattctattaat 24188712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 162 - 249
Target Start/End: Complemental strand, 18235862 - 18235776
Alignment:
Q  162 agaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacct 249  Q
    |||||||||||||||||  | | ||||||||| | |||||||||||||||||||| |||||||| ||| | |||||| ||||||||||    
T  18235862 agaggatctccatcctcttcttattctctctatggtatgtttttctattgttttg-tatgatgtatgtagccatgtgaaactaaacct 18235776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 207 - 302
Target Start/End: Original strand, 35708374 - 35708468
Alignment:
Q  207 tattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaat 302  Q
    ||||||||||||||||||| ||||| |||| ||||||||||||  ||||||  ||||| ||||||||| || |||||||| ||||| | |||||||    
T  35708374 tattgttttgttatgatgtatgttgccatgagcaactaaacct-cttgattaaggttccacgatgaactcattcttatttgttggaatttattaat 35708468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 310
Target Start/End: Complemental strand, 16593291 - 16593180
Alignment:
Q  198 atgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattcta 297  Q
    ||||||||||||||||||||| ||||||||||||  ||| ||||||||||||  ||| ||  ||||| |||||| ||||  |||||||| ||||| | ||    
T  16593291 atgtttttctattgttttgttttgatgtttgttgcaatgagcaactaaacct-cttggttaaggttccacgatgtaccccttcttatttattggaattta 16593193  T
Q  298 ttaatgaagtttt 310  Q
     |||| |||||||    
T  16593192 ataataaagtttt 16593180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 311
Target Start/End: Complemental strand, 21847975 - 21847865
Alignment:
Q  202 ttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacct-atttgatttgggttctacgatgaacccaatcttattttttggattctatta 300  Q
    |||||||||||||||| |||||||| |||| | | |||||||||||||  ||||||| |||||| | ||||||||   | ||||||||||| ||  ||||    
T  21847975 ttttctattgttttgtgatgatgttggttgccttatgcaactaaacctcttttgattagggttccaagatgaaccacttattattttttgggtttaatta 21847876  T
Q  301 atgaagttttt 311  Q
    || ||||||||    
T  21847875 ataaagttttt 21847865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 319
Target Start/End: Complemental strand, 27917555 - 27917437
Alignment:
Q  201 tttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctatta 300  Q
    ||||||||||||||||| |||||||  |||| |||| |||||||||| | ||||||| || ||| ||| ||| | |  || ||||| |||||||| ||||    
T  27917555 tttttctattgttttgtaatgatgtcggttgccatgagcaactaaacttctttgattaggtttcaacgttgatcaccttcctatttgttggattccatta 27917456  T
Q  301 atgaagtttttattaagtt 319  Q
    || | ||||||||| ||||    
T  27917455 ataatgtttttatttagtt 27917437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 27917632 - 27917557
Alignment:
Q  105 ttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaa--tccatggcagaggatctccatcctc 178  Q
    |||||||||||| || | | |||| |||||||||||||||||||||| |  | ||||| |||||||||||||||||    
T  27917632 ttattcattcagaaagctagcggtacaaggcaagggtcaagcatcaggagcttcatggtagaggatctccatcctc 27917557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 23909158 - 23909064
Alignment:
Q  215 tgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatgaagtttt 310  Q
    ||||||||||| ||||| |||| ||||||||||||  |||||  |||||| |||||||| ||  |||||||| ||||| | ||||||| |||||||    
T  23909158 tgttatgatgtatgttgccatgagcaactaaacct-cttgatcagggttccacgatgaatcccttcttatttgttggaatttattaataaagtttt 23909064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 226
Target Start/End: Original strand, 29769689 - 29769732
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtt 226  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||||    
T  29769689 tgttctctcgaggttatgtatttctattgttttgttatgatgtt 29769732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 286
Target Start/End: Complemental strand, 19949017 - 19948946
Alignment:
Q  214 ttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattt 286  Q
    ||||| |||||||||||| |||| ||||||||||||  |||||| |||||| |||||||| ||  ||||||||    
T  19949017 ttgttgtgatgtttgttgccatgagcaactaaacct-cttgattagggttccacgatgaatcctttcttattt 19948946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 1e-45; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 98 - 330
Target Start/End: Complemental strand, 19218809 - 19218576
Alignment:
Q  98 cacattcttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaatccatggcagaggatctccatcctccccctgttctctctaggat 197  Q
    |||||||||||||||| |  || | ||||||||||| |||||||||||||||||| | || ||||||| ||||||||||||| | ||||||||||||  |    
T  19218809 cacattcttattcattaataaagctaacggttcaagacaagggtcaagcatcagagttcaaggcagagtatctccatcctcctcttgttctctctagagt 19218710  T
Q  198 atg-tttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattct 296  Q
    ||  |||||||||||||||||||||| || ||||||||||||||||||||||| ||||||| ||||||||  ||||| |   |||||||| ||||||||     
T  19218709 atcctttttctattgttttgttatgaagtatgttgtcatgtgcaactaaacctctttgattagggttctaacatgaagcttttcttatttgttggattcc 19218610  T
Q  297 attaatgaagtttttattaagttatcattttctt 330  Q
    |||||| |  |||||||| ||||||  |||||||    
T  19218609 attaataatttttttattcagttatatttttctt 19218576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 98 - 390
Target Start/End: Complemental strand, 19263502 - 19263209
Alignment:
Q  98 cacattcttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaatccatggcagaggatctccatcctccccctgttctctctaggat 197  Q
    |||||||||||||||| || || | ||  |||||||  |||| |||||||||||| | || || ||||||||| || ||||| | | ||||||||||  |    
T  19263502 cacattcttattcatttagaaagctaaaagttcaagataaggatcaagcatcagagttcaaggtagaggatcttcaccctcctctttttctctctagagt 19263403  T
Q  198 atg-tttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattct 296  Q
    ||  |||||| |||||| ||||||||||||| |||| ||||||||||| |||| ||||||| |||||||| ||||||||   |||||||| |||||||||    
T  19263402 atcctttttccattgttctgttatgatgttttttgtaatgtgcaactacacctctttgattagggttctaagatgaacctcttcttatttgttggattct 19263303  T
Q  297 attaatgaagtttttattaagttatcattttctttgtgtctga-ttaattcgttcttgctttttcttaatacgctttcaattgagaatcagtatc 390  Q
    | |||| | ||||||||| ||||||  ||||| ||||||| || ||||||||||||||  | | |||||| |  ||||||| ||||||| |||||    
T  19263302 agtaataatgtttttattcagttatgcttttc-ttgtgtccgatttaattcgttcttgtctgtgcttaatgctttttcaatcgagaatccgtatc 19263209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 162 - 319
Target Start/End: Complemental strand, 14280840 - 14280683
Alignment:
Q  162 agaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttggg 261  Q
    ||||||||| |||||||| | ||||||||||||| ||||||||||||||| ||||| ||| |||  |||| |||  |||||||||||| |||||||  ||    
T  14280840 agaggatctacatcctcctcttgttctctctagggtatgtttttctattgctttgtaatggtgtcggttgccataagcaactaaacctctttgattaagg 14280741  T
Q  262 ttctacgatgaacccaatcttattttttggattctattaatgaagtttttattaagtt 319  Q
    ||| |||||||||||  |||||||| ||||||||||||||| ||||||||||| ||||    
T  14280740 ttccacgatgaaccccttcttatttgttggattctattaataaagtttttattcagtt 14280683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 156 - 310
Target Start/End: Complemental strand, 8401961 - 8401807
Alignment:
Q  156 catggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttga 255  Q
    ||||||||||||||| |||||||| | |||| |||||||| ||||||||| ||||||||||| || ||||  |||| ||||||||||||||| | ||| |    
T  8401961 catggcagaggatcttcatcctcctcttgttatctctagggtatgtttttatattgttttgtaataatgtcggttgccatgtgcaactaaacttttttta 8401862  T
Q  256 tttgggttctacgatgaacccaatcttattttttggattctattaatgaagtttt 310  Q
    || |||||| |||||||||||  |||||||| |||||||| |||||| |||||||    
T  8401861 ttagggttccacgatgaaccccttcttatttgttggattcaattaataaagtttt 8401807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 130 - 319
Target Start/End: Original strand, 18474733 - 18474925
Alignment:
Q  130 caaggcaagggtcaagcatcagaa--tccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgttt 227  Q
    |||||||||||||||||||||| |  | || ||||||| ||||||||||||| | | ||||||| ||| | | ||||||||||| ||||| ||||||| |    
T  18474733 caaggcaagggtcaagcatcaggagtttcaaggcagagtatctccatcctcctcttattctctccagggtttatttttctattggtttgtaatgatgtct 18474832  T
Q  228 gttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttatttt-ttggattctattaatgaagtttttattaagtt 319  Q
    ||| | ||| |||||||||||| |||||||  ||||| |||||||||||  | || |||| ||||||| ||||||| | ||||||||| ||||    
T  18474833 gtttttatgagcaactaaacctctttgattatggttccacgatgaaccccttatttttttgttggattgtattaataatgtttttattcagtt 18474925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 291
Target Start/End: Original strand, 10342317 - 10342449
Alignment:
Q  159 ggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgattt 258  Q
    |||||| ||| |||||||||| | ||||||||||||| ||| |||||||||| |||||||||||||| |||||||||| | ||||| |||| |||| ||     
T  10342317 ggcagatgatttccatcctcctcttgttctctctagggtatatttttctattattttgttatgatgtatgttgtcatgagaaactacacctctttggtta 10342416  T
Q  259 gggttctacgatgaacccaatcttattttttgg 291  Q
    |||||||| ||||||| |  |||||||| ||||    
T  10342417 gggttctaagatgaacaccttcttatttgttgg 10342449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 105 - 311
Target Start/End: Original strand, 11475362 - 11475569
Alignment:
Q  105 ttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaa-tccatggcagaggatctccatcctccccctgttctctctaggatatgttt 203  Q
    |||||||||||| || | | |||| |||||||||| |||||||||| |  | || || | |||||||  |||||  || ||||||||||| | |||||||    
T  11475362 ttattcattcagaaagctagcggtgcaaggcaaggatcaagcatcaaagcttcaaggtaaaggatctttatccttaccttgttctctctaaggtatgttt 11475461  T
Q  204 ttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatg 303  Q
    || ||||||||||| ||||| | ||||| ||| ||||||||||||| | | ||| |||||| |||||||||||  | |||||||||| |||| ||||||     
T  11475462 ttatattgttttgtaatgatatatgttgccatctgcaactaaacctctctaattagggttccacgatgaaccccttgttattttttgtattccattaata 11475561  T
Q  304 aagttttt 311  Q
    ||||||||    
T  11475562 aagttttt 11475569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 167 - 314
Target Start/End: Complemental strand, 22488414 - 22488268
Alignment:
Q  167 atctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttcta 266  Q
    ||||||||||||| | |||||||||||||||||||||||| |||||||||| |||||||  ||| ||||| | |||||||| | || ||||  ||||| |    
T  22488414 atctccatcctcctcttgttctctctaggatatgtttttcaattgttttgtaatgatgtcggttttcatgagaaactaaacttcttcgattatggttcca 22488315  T
Q  267 cgatgaacccaatcttattttttggattctattaatgaagtttttatt 314  Q
    |||||||| |  ||||| ||||||||||| || ||| |||||||||||    
T  22488314 cgatgaactccttctta-tttttggattccatgaataaagtttttatt 22488268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 196 - 290
Target Start/End: Complemental strand, 28731143 - 28731049
Alignment:
Q  196 atatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttg 290  Q
    |||||||||||||||||||||| ||||||| |||||||||||| | |||||||| ||||||| ||||||  ||||||||||  ||||||||||||    
T  28731143 atatgtttttctattgttttgtaatgatgtatgttgtcatgtgtagctaaacctctttgattagggttccgcgatgaaccccttcttattttttg 28731049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 319
Target Start/End: Original strand, 26419343 - 26419471
Alignment:
Q  192 taggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttg-atttgggttctacgatgaacccaatcttattttttg 290  Q
    |||| ||||||||||||||||||||| |||||||| |||| ||||||||||||||| | |||| |||  ||||| |||||||||||  |||||||| |||    
T  26419343 tagggtatgtttttctattgttttgtaatgatgttggttgccatgtgcaactaaacatctttgtattacggttccacgatgaaccccttcttatttgttg 26419442  T
Q  291 gattctattaatgaagtttttattaagtt 319  Q
    ||||| |||||  ||||||| ||| ||||    
T  26419443 gattcaattaaaaaagttttcattcagtt 26419471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 308
Target Start/End: Complemental strand, 2729200 - 2729000
Alignment:
Q  105 ttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaatccat-ggcagaggatctccatcctccccctgttctctctaggatatgttt 203  Q
    |||||||||||| || | |  ||||||||| ||||||||||||||||| | ||  |||||| | ||| |||||||  | ||||||||||| | ||| |||    
T  2729200 ttattcattcagaaagctagaggttcaaggtaagggtcaagcatcagagttcaaaggcagatggtcttcatcctcatcttgttctctctatggtatattt 2729101  T
Q  204 ttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatg 303  Q
    ||||| |||||||||||||||||    | ||||  ||||||||||| ||||||| ||||| || ||||||| | || |||||| |||||||| ||||||     
T  2729100 ttctactgttttgttatgatgtt----gccatgaacaactaaacctctttgattagggttataagatgaactccattttatttgttggattcaattaata 2729005  T
Q  304 aagtt 308  Q
    |||||    
T  2729004 aagtt 2729000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 314
Target Start/End: Complemental strand, 19542645 - 19542490
Alignment:
Q  159 ggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgattt 258  Q
    ||||||| ||||||||||||| | ||||||||||||| ||| |||||||| |  ||| | |||||||||||| | |||  |||||||| || |||||||     
T  19542645 ggcagagtatctccatcctcctcttgttctctctagggtatatttttctactagtttataatgatgtttgtttttatgaacaactaaatctctttgatta 19542546  T
Q  259 gggttctacgatgaacccaatcttattttttggattctattaatgaagtttttatt 314  Q
    |||||| |||||||||||  | || ||| ||||||| ||||||| | |||||||||    
T  19542545 gggttccacgatgaaccccttattttttgttggattgtattaataatgtttttatt 19542490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 105 - 319
Target Start/End: Complemental strand, 21828810 - 21828593
Alignment:
Q  105 ttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaa-tccatggcagaggatctccatcctccccctgttctctctagg--atatgt 201  Q
    |||||||||||| || | | |||  ||| ||||||||||||||| |||  | || |||| |||||||||||| ||| | |||||||||||||  || | |    
T  21828810 ttattcattcagaaagctagcggcacaatgcaagggtcaagcataagagcttcaaggcaaaggatctccatcttcctcttgttctctctagggaattttt 21828711  T
Q  202 ttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaa 301  Q
    ||||||||||||| || |||||||  |||| ||||||||||||||||| ||||||   ||||| | ||||||||   |||||||||| |||||| |||||    
T  21828710 ttttctattgtttggtaatgatgtcagttgccatgtgcaactaaacctctttgatcaaggttccatgatgaacctcttcttatttttgggattcaattaa 21828611  T
Q  302 tgaagtttttattaagtt 319  Q
    | |  |||||||| ||||    
T  21828610 taatttttttattcagtt 21828593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 174 - 321
Target Start/End: Original strand, 27415694 - 27415840
Alignment:
Q  174 tcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaa 273  Q
    |||||| | |||||||||| || ||| ||||||||||||||||||||| ||| | ||| |||| | |||||||||  || || || ||||||| ||||||    
T  27415694 tcctcctcttgttctctctggggtatctttttctattgttttgttatggtgtatattgccatgagtaactaaaccgcttcga-ttaggttctaagatgaa 27415792  T
Q  274 cccaatcttattttttggattctattaatgaagtttttattaagttat 321  Q
    |||  |||||||| |||||||| ||| || ||||||| ||| ||||||    
T  27415793 ccccttcttatttgttggattcaatttataaagttttcattcagttat 27415840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 18066245 - 18066334
Alignment:
Q  174 tcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggtt 263  Q
    |||||| | |||||||| |||  ||| |||||||||||||||||||||| || | |||||||| |||||||||||| ||||||| |||||    
T  18066245 tcctcctcttgttctctatagagtatctttttctattgttttgttatgacgtatattgtcatgagcaactaaacctctttgattagggtt 18066334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 266
Target Start/End: Original strand, 21018176 - 21018268
Alignment:
Q  174 tcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttcta 266  Q
    |||||| | |||||| ||| |||||||||||||||||||| ||||||||||||||||  ||||  || |||||||| ||||||| || |||||    
T  21018176 tcctcctcttgttctgtctgggatatgtttttctattgttatgttatgatgtttgtttccatgaacagctaaacctctttgattaggtttcta 21018268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 21806100 - 21806176
Alignment:
Q  197 tatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaaccc 276  Q
    ||||||||||||||||   || ||||||| ||||||||||||||||||||||| |||| || |||||||| ||| |||||    
T  21806100 tatgtttttctattgt---gtaatgatgtatgttgtcatgtgcaactaaacctctttggttagggttctaagattaaccc 21806176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 423
Target Start/End: Complemental strand, 25918656 - 25918573
Alignment:
Q  340 ttaattcgttcttgctttttcttaatacgctttcaattgagaatcagtatcaataatcttgaaaatcgatccgtacatattagt 423  Q
    ||||||||||||||| | | |||||| |  ||||||||||||||| |||||  ||||||||||||| |||||||| | ||||||    
T  25918656 ttaattcgttcttgcctgtgcttaatgctttttcaattgagaatccgtatcggtaatcttgaaaattgatccgtatagattagt 25918573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 11521777 - 11521898
Alignment:
Q  197 tatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattct 296  Q
    ||||||||| ||||||||| ||||||||| ||||| |||| ||||||||||||  |||||| ||| || | | ||||| | ||||||||| ||||| | |    
T  11521777 tatgtttttatattgtttttttatgatgtctgttgccatgagcaactaaacct-cttgattagggatccatgttgaactcgatcttatttgttggaattt 11521875  T
Q  297 attaatgaagtttttattaagtt 319  Q
    |||||| || |||| ||| ||||    
T  11521876 attaataaatttttcattcagtt 11521898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 25883651 - 25883708
Alignment:
Q  192 taggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacct 249  Q
    |||| |||||||||||||||||||||||  |||| ||||| |||| ||||||||||||    
T  25883651 tagggtatgtttttctattgttttgttactatgtatgttgccatgagcaactaaacct 25883708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 21653958 - 21654042
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctat-ttgatttgggttcta 266  Q
    |||||||||||||  |||||||||| || |||||| |||||||||||   |||||| |||||||||| | |||||| ||||||||    
T  21653958 tgttctctctagggcatgtttttctcttattttgtaatgatgtttgtaaccatgtgtaactaaacctctcttgattagggttcta 21654042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 28731212 - 28731152
Alignment:
Q  164 aggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgt 225  Q
    ||||||||||||||   | |||||||||||  |||||||||||||||||||||| |||||||    
T  28731212 aggatctccatccttttcttgttctctctaa-atatgtttttctattgttttgtaatgatgt 28731152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 319
Target Start/End: Complemental strand, 33914140 - 33913997
Alignment:
Q  174 tcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaa 273  Q
    |||||| | |||||| | |||| ||||||||| || ||||||||||  |||||||||| || | ||||||||||||  |||||| || ||  | ||||||    
T  33914140 tcctcctcttgttctttttagggtatgtttttataatgttttgttacaatgtttgttgccacgagcaactaaacct-cttgattaggctttcaagatgaa 33914042  T
Q  274 cccaatcttattttttggattctattaatgaagtttttattaagtt 319  Q
    |||  |||||||| || || ||||||||| ||||||| ||| ||||    
T  33914041 ccc-ttcttatttgttcgaatctattaataaagttttcattcagtt 33913997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 2e-44; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 127 - 321
Target Start/End: Original strand, 26188280 - 26188474
Alignment:
Q  127 gttcaaggcaagggtcaagcatcagaat-ccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgt 225  Q
    |||||||||||| ||||||||||||| | ||| |||||||||||| |||||||| | |||||||| |||| |||||||| |||||||||||||| |||||    
T  26188280 gttcaaggcaagagtcaagcatcagagttccaaggcagaggatcttcatcctcctcttgttctctatagggtatgtttt-ctattgttttgttacgatgt 26188378  T
Q  226 ttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatgaagtttttattaagttat 321  Q
     ||||||||||| ||||||||||| ||||||| |||||||| ||||||| |  |||||||| |||||| | |||||| ||||||||||| ||||||    
T  26188379 atgttgtcatgtacaactaaacctctttgattagggttctaagatgaactccttcttatttgttggataccattaataaagtttttatttagttat 26188474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 163 - 319
Target Start/End: Original strand, 29437987 - 29438143
Alignment:
Q  163 gaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggt 262  Q
    ||||||||||||| | | | |||| |||||||| ||||||||||||||||||||| |||||||  |||  |||| |||||||||||| ||||||| ||||    
T  29437987 gaggatctccatcattctcttgttatctctagggtatgtttttctattgttttgtaatgatgtcggtttccatgagcaactaaacctctttgattagggt 29438086  T
Q  263 tctacgatgaacccaatcttattttttggattctattaatgaagtttttattaagtt 319  Q
    || || ||||||||  |||||||| ||||||||| ||||| || |||||||| ||||    
T  29438087 tccacaatgaaccctttcttatttgttggattcttttaataaattttttattcagtt 29438143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 134 - 311
Target Start/End: Original strand, 10576993 - 10577172
Alignment:
Q  134 gcaagggtcaagcatcagaa-tccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgt 232  Q
    |||||||||||||||||||  |  | || ||||||||||| |||||| | ||| ||||||||| ||||||||| ||||||||||| |||||||||||||     
T  10576993 gcaagggtcaagcatcagagcttgaaggaagaggatctccctcctcctcttgtcctctctagggtatgtttttatattgttttgtaatgatgtttgttgc 10577092  T
Q  233 catgtgcaactaaacctat-ttgatttgggttctacgatgaacccaatcttattttttggattctattaatgaagttttt 311  Q
    ||||| ||||||||||| | |||| | |||||| | ||||||||   |||||||| |||||||| ||| |||||||||||    
T  10577093 catgtccaactaaacctctattgactagggttccatgatgaacctcttcttatttgttggattcaatttatgaagttttt 10577172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 295
Target Start/End: Complemental strand, 31859447 - 31859313
Alignment:
Q  161 cagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgg 260  Q
    |||||||| | |||||||| | |||||||   ||| ||||| ||||||||||||||| ||||| || |||||||||||||||||||||| |||||||  |    
T  31859447 cagaggattttcatcctcctcttgttctcatcagggtatgtctttctattgttttgtaatgatattggttgtcatgtgcaactaaacctctttgattaag 31859348  T
Q  261 gttctacgatgaacccaatcttattttttggattc 295  Q
    |||| ||||| |||||  | |||||||||||||||    
T  31859347 gttccacgataaaccccttattattttttggattc 31859313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 108 - 302
Target Start/End: Original strand, 19602284 - 19602480
Alignment:
Q  108 ttcattcaggaatccaacggttcaaggcaagggtcaagcatcagaatc--catggcagaggatctccatcctccccctgttctctctaggatatgttttt 205  Q
    ||||||||| || | | |||| ||||||||||| |||||||||| | |  || |||||||||| || ||| |||   |||| |||| ||| |||||||||    
T  19602284 ttcattcagaaagctagcggtacaaggcaagggccaagcatcaggagcttcaaggcagaggatttctatcatccttttgttatctcgagggtatgttttt 19602383  T
Q  206 ctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaat 302  Q
    |||||||||||| |||||||  |||| |||| |||||||||| | ||||||| |||||| | |||||||||  ||| |||| |||||| ||||||||    
T  19602384 ctattgttttgtaatgatgtcggttgccatgagcaactaaacttctttgattagggttccatgatgaaccccttctcatttgttggatactattaat 19602480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 12806487 - 12806423
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaac 247  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||    
T  12806487 tgttctctctaggatatatttttctattgttttgttatgatgtttattgtcatgagcaactaaac 12806423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 319
Target Start/End: Complemental strand, 17024457 - 17024322
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    |||||||||||||| |||||||||||| | ||| ||||||||||||||  |||| |||||||||||| ||| ||| |||||| | |||||||||  ||||    
T  17024457 tgttctctctaggaaatgtttttctatagctttattatgatgtttgtttccatgagcaactaaacctcttt-attagggttccatgatgaaccctttctt 17024359  T
Q  283 attttttggattctattaatgaagtttttattaagtt 319  Q
    ||||||| |||  ||||||| ||||||| ||| ||||    
T  17024358 atttttttgatattattaataaagttttcattcagtt 17024322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 5676765 - 5676888
Alignment:
Q  172 catcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatg 271  Q
    |||||||| | |||||| |||| | ||||||||||||||||||||| ||||||| |||||  |||||||||| ||||| ||||||| |||||||| || |    
T  5676765 catcctcctcttgttctttctatggtatgtttttctattgttttgtaatgatgtatgttgctatgtgcaactgaacctctttgattagggttctaagaag 5676864  T
Q  272 aacccaatcttattttttggattc 295  Q
    ||||   | |||||||||||||||    
T  5676865 aacctcttattattttttggattc 5676888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 185 - 319
Target Start/End: Complemental strand, 9782627 - 9782494
Alignment:
Q  185 ttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttat 284  Q
    |||| |||||| ||| ||| ||||||||||||||||||||| ||||  |||| ||||||||||||  |||||| |||||| |||||||||||  ||||||    
T  9782627 ttctttctagggtatatttgtctattgttttgttatgatgtatgtttgcatgagcaactaaacct-cttgattagggttccacgatgaaccccttcttat 9782529  T
Q  285 tttttggattctattaatgaagtttttattaagtt 319  Q
    || ||||| | ||||||| ||||||| ||| ||||    
T  9782528 ttgttggaatttattaataaagttttcattcagtt 9782494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 130 - 302
Target Start/End: Original strand, 18444736 - 18444907
Alignment:
Q  130 caaggcaagggtcaagcatcagaatc-catggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttg 228  Q
    ||||| |||||||||| |||||| |  || ||| ||||||||||||||||| | |||||||  |||| ||||||||| | ||||||||| |||||| |||    
T  18444736 caaggaaagggtcaagaatcagagtttcaaggcggaggatctccatcctcctcttgttctcattagggtatgtttttatgttgttttgtaatgatg-ttg 18444834  T
Q  229 ttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaat 302  Q
     || |||| |||| ||||| | ||||||| |||||| |||||||| ||  ||||||||||||||||| ||||||    
T  18444835 gtgccatgagcaaataaacatctttgattagggttccacgatgaaacc-ttcttattttttggattcaattaat 18444907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 311
Target Start/End: Complemental strand, 39134339 - 39134190
Alignment:
Q  162 agaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttggg 261  Q
    |||||||||| |||||||   |||||||| ||   ||||||||||||||||||| | |||||||||| |||||||||||| ||||||| |||||||   |    
T  39134339 agaggatctctatcctcctattgttctctataatgtatgtttttctattgttttataatgatgtttgatgtcatgtgcaaataaacctctttgattaaag 39134240  T
Q  262 ttctacgatgaacccaatcttattttttggattctattaatgaagttttt 311  Q
    ||  ||||||||||   |||||||| | |||||| |||||| ||||||||    
T  39134239 tttcacgatgaaccatttcttatttgtaggattcaattaataaagttttt 39134190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 183 - 307
Target Start/End: Complemental strand, 1695433 - 1695310
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    ||||||||| ||| ||||||||||||||||||||| | ||||||||||||||||  |||||||||||  |||||| |||||| | |||||||||  ||||    
T  1695433 tgttctctcgagggtatgtttttctattgttttgtcacgatgtttgttgtcatgaccaactaaacct-cttgattagggttccatgatgaaccccttctt 1695335  T
Q  283 attttttggattctattaatgaagt 307  Q
    |||| ||| ||  ||||||| ||||    
T  1695334 atttgttgaatattattaataaagt 1695310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 302
Target Start/End: Original strand, 4733264 - 4733407
Alignment:
Q  159 ggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgattt 258  Q
    |||||| |||||||||||||    |||||| |||| | ||||||||||||||||||||| || |  ||||||| ||||||||||||||||| |||||||     
T  4733264 ggcagatgatctccatcctcttgttgttctttctaaggtatgtttttctattgttttgtaataagctttgttgccatgtgcaactaaacctctttgatta 4733363  T
Q  259 gggttctacgatgaacccaatcttattttttggattctattaat 302  Q
    |||| | ||||||||     |||||||| |||||||| ||||||    
T  4733364 gggtcccacgatgaattacttcttatttgttggattcaattaat 4733407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 156 - 309
Target Start/End: Complemental strand, 7023784 - 7023630
Alignment:
Q  156 catggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctat-ttg 254  Q
    ||||||||| ||||||||||||||    ||| |||||||  ||||||||| | ||||||||| |||| ||  |||  ||||||||||||||||| | |||    
T  7023784 catggcagatgatctccatcctcctttcgttttctctagtgtatgtttttatgttgttttgtaatgacgtcggtttccatgtgcaactaaacctctcttg 7023685  T
Q  255 atttgggttctacgatgaacccaatcttattttttggattctattaatgaagttt 309  Q
    |||  ||||| | |||||||||| |||||||| |||||||| |||||| ||||||    
T  7023684 attatggttccatgatgaacccattcttatttgttggattcaattaataaagttt 7023630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 212 - 311
Target Start/End: Original strand, 9288538 - 9288637
Alignment:
Q  212 ttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatgaagttttt 311  Q
    |||||| ||||||||||||  ||| ||||||||||||| |||||||  |||||||| ||||||||  | |||||| |||||||| |||||| ||||||||    
T  9288538 ttttgtaatgatgtttgttcacatatgcaactaaacctctttgattatggttctacaatgaaccccttattatttgttggattcaattaataaagttttt 9288637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 47024281 - 47024215
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacct 249  Q
    ||||||||||| | ||| |||||||||||||||||||||||||||||||||||| || || ||||||    
T  47024281 tgttctctctaaggtatatttttctattgttttgttatgatgtttgttgtcatgagctacgaaacct 47024215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 319
Target Start/End: Original strand, 51885211 - 51885347
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    |||||||| |||| ||||||||||| ||||||| ||||||||   |||||||||  |||||||||||  |||||| || ||| |||||||||||  ||||    
T  51885211 tgttctctgtagggtatgtttttcttttgttttcttatgatgccagttgtcatgaacaactaaacct-cttgattaggtttccacgatgaaccccttctt 51885309  T
Q  283 attttttggattctattaatgaagttttt-attaagtt 319  Q
    |||| ||||| | || |||| |||||||| ||||||||    
T  51885310 atttattggaatttaataataaagtttttcattaagtt 51885347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 15192812 - 15192891
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggtt 263  Q
    ||||||||| ||| | ||||||||||||||||||||||||||| |||||||| | | |||||||||| ||||||| |||||    
T  15192812 tgttctctccagggtgtgtttttctattgttttgttatgatgtatgttgtcaagagaaactaaacct-tttgattagggtt 15192891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 284
Target Start/End: Original strand, 21047790 - 21047873
Alignment:
Q  201 tttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttat 284  Q
    ||||| ||||||||||| |||||||| |||| ||||||||||||||||| ||||||| |||||  | ||||||| || ||||||    
T  21047790 tttttttattgttttgtaatgatgttggttgccatgtgcaactaaacctctttgattagggtttcaagatgaactcattcttat 21047873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 310
Target Start/End: Original strand, 24576923 - 24577045
Alignment:
Q  185 ttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttat 284  Q
    ||||||||||| ||||||| |||||| |||||| ||||  |  ||||||||| |||| ||||||| ||| | | |||||| ||||| |||||   |||||    
T  24576923 ttctctctagggtatgtttctctattattttgtaatgacatcggttgtcatgagcaattaaacctctttaactagggttccacgataaaccc---cttat 24577019  T
Q  285 tttttggattctattaatgaagtttt 310  Q
    || |||||||||||||||| ||||||    
T  24577020 ttgttggattctattaatgtagtttt 24577045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 174 - 244
Target Start/End: Original strand, 18898565 - 18898635
Alignment:
Q  174 tcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaacta 244  Q
    |||| ||| |||| |||||| | ||||||||||||||||||||||||||||| |||||||||  |||||||    
T  18898565 tccttcccttgttttctctaagttatgtttttctattgttttgttatgatgtatgttgtcataagcaacta 18898635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 319
Target Start/End: Complemental strand, 10451010 - 10450874
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    ||||||||||| |  |||||||||||| ||||  ||||||| | ||||||||||  |||||||||||  |||||| |||||||| |||||||||  | ||    
T  10451010 tgttctctctaaggcatgtttttctatggtttcattatgatttatgttgtcatgaacaactaaacct-cttgattagggttctatgatgaaccccttatt 10450912  T
Q  283 attttttggattctattaatgaagt-ttttattaagtt 319  Q
    |||| ||||||  ||||||| |||| ||||||| ||||    
T  10450911 atttgttggatattattaataaagtcttttattcagtt 10450874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 25314772 - 25314683
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatga 272  Q
    |||||| |||||| ||||||||||||||||||| ||||||||||||||  ||   |||||||||||| | | ||| |||||| |||||||    
T  25314772 tgttctgtctagggtatgtttttctattgttttcttatgatgtttgttaccacaagcaactaaacctctctaattagggttccacgatga 25314683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 311
Target Start/End: Original strand, 33519616 - 33519744
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    |||||||||| || ||| |||||||||||| || | |||||||  |||| ||| || |||||||||| ||||||| |||||  ||| |||||||  ||||    
T  33519616 tgttctctcttgggtatatttttctattgtcttataatgatgtcggttgccatatgtaactaaacctctttgattagggtttcacgttgaaccccttctt 33519715  T
Q  283 attttttggattctattaatgaagttttt 311  Q
    |||| ||  |||| |||||| ||||||||    
T  33519716 atttgttaaattcaattaataaagttttt 33519744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 17184150 - 17184088
Alignment:
Q  187 ctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacct 249  Q
    |||||| || ||||||||||||||||||| | |||||||| |||| |||| ||||||||||||    
T  17184150 ctctctcgggtatgtttttctattgttttctaatgatgttggttgccatgagcaactaaacct 17184088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 311
Target Start/End: Original strand, 22120194 - 22120376
Alignment:
Q  130 caaggcaagggtcaagcatcagaa-tccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttg 228  Q
    ||||||||||||||||||||| |  |||| |||| | ||||| ||||||||   |||| ||  |||| ||||||||| |||| |||||  |||||||  |    
T  22120194 caaggcaagggtcaagcatcatagctccaaggcatatgatctacatcctccttttgttatcgttagggtatgtttttatattattttgcaatgatgtcag 22120293  T
Q  229 ttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatgaagttttt 311  Q
    ||  ||||  ||||||| ||||||||||| |||||  ||||||||| |  |||||||| |||  ||| |||||| ||||||||    
T  22120294 tttccatgaacaactaagcctatttgattagggtttcacgatgaacaccttcttatttgttgttttcaattaataaagttttt 22120376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 319
Target Start/End: Complemental strand, 20985120 - 20985007
Alignment:
Q  206 ctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatgaa 305  Q
    |||||||||||| ||||||   ||||| ||| | |||| ||||||||||||| |||||| | |||||| ||  |||||||| |||| |||| ||||| ||    
T  20985120 ctattgttttgtaatgatgccggttgttatgagtaactgaacctatttgattagggttccatgatgaatcccttcttatttgttgggttcttttaataaa 20985021  T
Q  306 gtttttattaagtt 319  Q
    ||||| ||| ||||    
T  20985020 gttttcattcagtt 20985007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 310
Target Start/End: Complemental strand, 12110858 - 12110732
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttt-tgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatct 281  Q
    |||||||| |||| ||| |||||||||| | | ||||||||||||||||| || | | |||||||||| ||| ||  |||||| | ||||||||| | ||    
T  12110858 tgttctctatagggtat-tttttctattttatgtgttatgatgtttgttgccacgagtaactaaacctcttt-atcagggttccaagatgaaccccaact 12110761  T
Q  282 tattttttggattctattaatgaagtttt 310  Q
    ||||| ||||||||||||| | |||||||    
T  12110760 tatttgttggattctattattaaagtttt 12110732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 311
Target Start/End: Original strand, 27303311 - 27303434
Alignment:
Q  186 tctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttatt 285  Q
    |||||||| | ||||||||||||| ||||| ||||||| |   ||  |||| ||||||||||||  |||||| |||||| |||||||||||  |||||||    
T  27303311 tctctctatggtatgtttttctatagtttttttatgatatcgatttccatgagcaactaaacct-cttgattagggttccacgatgaaccc-ttcttatt 27303408  T
Q  286 ttttggattctattaatgaagttttt 311  Q
    | ||||| | ||||||| || |||||    
T  27303409 tgttggaatttattaataaatttttt 27303434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 9e-40; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 98 - 282
Target Start/End: Complemental strand, 4092103 - 4091918
Alignment:
Q  98 cacattcttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaa--tccatggcagaggatctccatcctccccctgttctctctagg 195  Q
    |||||| |||||||||||| || | | ||||| ||||||||||||||||||||||   |||| ||||||||||||||||| ||| | |||||||||||||    
T  4092103 cacattattattcattcagaaagctagcggttgaaggcaagggtcaagcatcagaggttccaaggcagaggatctccatcttcctcttgttctctctagg 4092004  T
Q  196 atatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
     |||||||||||||||||||||||| |||| ||||| |||  |||||||||||| ||||||| ||||||||  ||||||||| ||||    
T  4092003 -tatgtttttctattgttttgttataatgtatgttgccattagcaactaaacctctttgattagggttctaacatgaacccattctt 4091918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 166 - 295
Target Start/End: Complemental strand, 5312325 - 5312196
Alignment:
Q  166 gatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttct 265  Q
    |||||||||||||| | ||||||||||||| |||||||||| |||||||||| |||||||  |||||||||||||||||||||| ||||||| || ||||    
T  5312325 gatctccatcctcctcttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgtcatgtgcaactaaacctctttgattaggattct 5312226  T
Q  266 acgatgaacccaatcttattttttggattc 295  Q
    |||||||||||| |||||||| ||||||||    
T  5312225 acgatgaacccattcttatttgttggattc 5312196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 100 - 314
Target Start/End: Original strand, 3400325 - 3400543
Alignment:
Q  100 cattcttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaatccatg------gcagaggatctccatcctccccctgttctctcta 193  Q
    |||||||||||||| || |||| ||||||||||||| |||||||||||| | | |||| |      ||||| |||||  || ||||   |||| ||||||    
T  3400325 cattcttattcatttagaaatctaacggttcaaggcgagggtcaagcattaaagtccaagtccaaggcagatgatcttgattctcct--tgttttctcta 3400422  T
Q  194 ggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggat 293  Q
    || ||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||| |||||||  ||||||| |||||||||  |||||||| ||||||    
T  3400423 gggtatgtttttatattgttttgttatgatttttattgccatgtgcaactaaacctctttgattaaggttctaagatgaaccccttcttatttcttggat 3400522  T
Q  294 tctattaatgaagtttttatt 314  Q
    || |||| | |||||||||||    
T  3400523 tcgattagtaaagtttttatt 3400543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 105 - 319
Target Start/End: Complemental strand, 24596605 - 24596389
Alignment:
Q  105 ttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaatc--catggcagaggatctccatcctccccctgttctctctaggatatgtt 202  Q
    |||||||||||| || |  | ||| |||||||||||||||||||||| | |  || |||||| |||||| ||| ||| | ||||||||||||  ||||||    
T  24596605 ttattcattcagaaagctgatggtacaaggcaagggtcaagcatcaggagcttcaaggcagatgatctctatcatcctcttgttctctctagtgtatgtt 24596506  T
Q  203 tttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaat 302  Q
    ||| ||||||||| | |||||||  ||||| ||| ||||| |||||| ||| ||| | |||| |||||||||||| |||||||| ||| |||||||||||    
T  24596505 tttatattgttttataatgatgtcggttgttatgagcaaccaaacctctttaattagagttccacgatgaacccattcttatttgttgaattctattaat 24596406  T
Q  303 gaagtttttattaagtt 319  Q
     ||||||||||| ||||    
T  24596405 aaagtttttatttagtt 24596389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 164 - 330
Target Start/End: Original strand, 20017547 - 20017712
Alignment:
Q  164 aggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggtt 263  Q
    ||||||| |||| ||| | |||||||||| || ||||||||||||||||||||||||| || |||||  |||| ||||||||||||| |||||| |||||    
T  20017547 aggatcttcatcttcctcttgttctctcttggctatgtttttctattgttttgttatgttggttgttaccatgagcaactaaaccta-ttgattagggtt 20017645  T
Q  264 ctacgatgaacccaatcttattttttggattctattaatgaagtttttattaagttatcattttctt 330  Q
    ||| |||||||||  |||||||  |||||||| ||| || ||||||| ||| ||||||  |||||||    
T  20017646 ctaagatgaaccctttcttattggttggattcaattgataaagttttcattcagttatgtttttctt 20017712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 183 - 310
Target Start/End: Complemental strand, 21545385 - 21545260
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    ||||||||||||| ||||||||| |||||||||||||||||| ||||  |||||||||| ||||||| ||||||| || ||||| |||||||||  ||||    
T  21545385 tgttctctctagggtatgtttttatattgttttgttatgatgattgt--tcatgtgcaagtaaacctctttgattaggcttctaagatgaaccccttctt 21545288  T
Q  283 attttttggattctattaatgaagtttt 310  Q
    |||| |||||||  |||||| |||||||    
T  21545287 atttgttggatttaattaataaagtttt 21545260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 300
Target Start/End: Original strand, 23126710 - 23126823
Alignment:
Q  186 tctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttatt 285  Q
    |||||||||| | ||||||||||||||||||||||||||||| ||| |||| | |||||| ||| ||||||| ||| |||| |||||||||  |||||||    
T  23126710 tctctctagggtttgtttttctattgttttgttatgatgtttattgccatgagtaactaagcctctttgattaggg-tctaagatgaaccccttcttatt 23126808  T
Q  286 ttttggattctatta 300  Q
    |||||||||| ||||    
T  23126809 ttttggattcaatta 23126823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 201 - 302
Target Start/End: Original strand, 11082144 - 11082242
Alignment:
Q  201 tttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctatta 300  Q
    ||||||||||||||| | ||||||| |||||||||||| | |||||||| ||||||| |||||| |||||||||||   ||||||| |||||||||||||    
T  11082144 tttttctattgttttttcatgatgtgtgttgtcatgtgtagctaaacctctttgattagggttccacgatgaaccc---cttatttgttggattctatta 11082240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 201 - 405
Target Start/End: Original strand, 23072921 - 23073126
Alignment:
Q  201 tttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctatta 300  Q
    ||||||||||||||| | ||||||||||||| |||||| |||| ||||| ||||||| ||||||||  |||||||   |||||||| |||||||| ||||    
T  23072921 tttttctattgttttataatgatgtttgttggcatgtgaaacttaacctctttgattagggttctaaaatgaaccatttcttatttgttggattccatta 23073020  T
Q  301 atgaa-gtttttattaagttatcattttctttgtgtctga-ttaattcgttcttgctttttcttaatacgctttcaattgagaatcagtatcaataatct 398  Q
    || ||  |||||||  | ||||  ||||| ||||||| || |||||||| |||||| | | |||||| |  |||||||||||||||  ||||  ||||||    
T  23073021 ataaatttttttatccaattatgtttttc-ttgtgtccgatttaattcgctcttgcatgtgcttaatgctttttcaattgagaatccttatcggtaatct 23073119  T
Q  399 tgaaaat 405  Q
    |||||||    
T  23073120 tgaaaat 23073126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 197 - 311
Target Start/End: Complemental strand, 26839717 - 26839604
Alignment:
Q  197 tatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattct 296  Q
    ||||||||| ||||||||||||||||| ||||||| |||| ||||||||||||  ||||||  ||||| | |||||||||  |||||||| ||||||| |    
T  26839717 tatgtttttatattgttttgttatgatatttgttgccatgagcaactaaacct-cttgattaaggttccaagatgaaccccttcttatttgttggatttt 26839619  T
Q  297 attaatgaagttttt 311  Q
    |||||| ||||||||    
T  26839618 attaataaagttttt 26839604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 130 - 249
Target Start/End: Original strand, 5636736 - 5636857
Alignment:
Q  130 caaggcaagggtcaagcatcagaa-tccatggcagaggatctccatcctccccctgttctctctaggatatgtttttct-attgttttgttatgatgttt 227  Q
    |||||||| |||||||||||| |  | || |||||| |||||||| ||||| | ||||||||||||| ||| ||||||| |||||||||| ||||||| |    
T  5636736 caaggcaatggtcaagcatcaaagcttcaaggcagatgatctccaacctcctcttgttctctctagggtatttttttcttattgttttgtaatgatgtat 5636835  T
Q  228 gttgtcatgtgcaactaaacct 249  Q
    |||||||||||||||| |||||    
T  5636836 gttgtcatgtgcaactcaacct 5636857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 7777622 - 7777558
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaac 247  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| ||||||||||    
T  7777622 tgttctctctagggtatgtttttctattgttttattatgatgtttgttgccatgagcaactaaac 7777558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 183 - 319
Target Start/End: Original strand, 21472365 - 21472500
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    |||||||||||||||||||||||||||||||||  |||||||| ||||| |||| ||| ||||||||  |||| |  ||||| ||||||||| |  ||||    
T  21472365 tgttctctctaggatatgtttttctattgttttcatatgatgtatgttgccatgagcagctaaacct-cttgaatatggttccacgatgaacaccttctt 21472463  T
Q  283 attttttggattctattaatgaagtttttattaagtt 319  Q
    |||| ||||| | ||||||| ||||||| ||| ||||    
T  21472464 atttgttggaatttattaataaagttttcattcagtt 21472500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 2630047 - 2629937
Alignment:
Q  191 ctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttg 290  Q
    ||||| ||||||||| | ||||||||||||||||||||||| |||| ||||||||||||  |||||| |||||| | |||||||||  |||||||| |||    
T  2630047 ctagggtatgtttttattttgttttgttatgatgtttgttgccatgagcaactaaacct-cttgattagggttccatgatgaaccccttcttatttgttg 2629949  T
Q  291 gattctattaat 302  Q
    || | |||||||    
T  2629948 gaatttattaat 2629937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 162 - 313
Target Start/End: Original strand, 9760664 - 9760815
Alignment:
Q  162 agaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttggg 261  Q
    ||||||||||||||||||   ||||||||||| | |||||||||||||| |||||| |||||||  | |  || | || ||||||||| ||||| | |||    
T  9760664 agaggatctccatcctcctattgttctctctaaggtatgtttttctattattttgtaatgatgtcagattccaggagcgactaaacctctttgagtaggg 9760763  T
Q  262 ttctacgatgaacccaatcttattttttggattctattaatgaagtttttat 313  Q
     |  |||||||||||  |||||||| ||||||||| ||||| ||||||||||    
T  9760764 cttcacgatgaaccccttcttatttgttggattcttttaataaagtttttat 9760815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 130 - 295
Target Start/End: Complemental strand, 22334869 - 22334702
Alignment:
Q  130 caaggcaagggtcaagcatca-gaa--tccatggcagaggatctccatcctccccctgttctctctaggatatgtttttc-tattgttttgttatgatgt 225  Q
    ||||||||||||||||||||| |||  | || |||||||||||||||| |||| | || ||| |||| |||||||||||| |||| |||||| | |||||    
T  22334869 caaggcaagggtcaagcatcaagaactttca-ggcagaggatctccattctcctcttggtctttctaagatatgtttttcctatt-ttttgtaaagatgt 22334772  T
Q  226 ttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattc 295  Q
     ||||||||||| |||| |||||| |||||||  ||||| |||||||||||  |||| ||| ||||||||    
T  22334771 atgttgtcatgtacaacaaaacctctttgattatggttccacgatgaaccccttcttctttgttggattc 22334702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 314
Target Start/End: Original strand, 30406182 - 30406288
Alignment:
Q  208 attgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatgaagt 307  Q
    |||||||||| |||||||| |||| |||  |||||||||||| |||||||  ||||| |||||||||||  ||| |||| |||||||| |||||| ||||    
T  30406182 attgttttgtaatgatgttggttgccataagcaactaaacctctttgattatggttccacgatgaaccccttctcatttgttggattcaattaataaagt 30406281  T
Q  308 ttttatt 314  Q
    |||||||    
T  30406282 ttttatt 30406288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 311
Target Start/End: Original strand, 7815892 - 7816019
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    ||||| ||||||| ||||||||||||||||||| || |||||| ||||| |||| ||||||||||||  |||||| | |||| | ||| |||||  ||||    
T  7815892 tgttcactctagggtatgtttttctattgttttcttgtgatgtatgttgccatgagcaactaaacct-cttgattagcgttccaagataaaccccttctt 7815990  T
Q  283 attttttggattctattaatgaagttttt 311  Q
    |||| || || | ||||||||||||||||    
T  7815991 atttgttcgaatttattaatgaagttttt 7816019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 315724 - 315802
Alignment:
Q  197 tatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaaccc 276  Q
    ||||||||||||||| ||||||||||||| ||||| |||| ||||||||||||  |||||| |||||| |||||||||||    
T  315724 tatgtttttctattgctttgttatgatgtatgttgccatgagcaactaaacct-cttgattagggttccacgatgaaccc 315802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 197 - 319
Target Start/End: Complemental strand, 9405375 - 9405254
Alignment:
Q  197 tatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattct 296  Q
    |||| |||||||||||||||||||||||| ||||| |||| ||||||||||||  || ||| |||||| | |||||||||  |||||||| ||||||  |    
T  9405375 tatgattttctattgttttgttatgatgtatgttgccatgagcaactaaacct-cttaattagggttccatgatgaaccccttcttatttgttggatatt 9405277  T
Q  297 attaatgaagtttttattaagtt 319  Q
    |||| | ||||||| ||| ||||    
T  9405276 attattaaagttttcattcagtt 9405254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 405
Target Start/End: Complemental strand, 20470306 - 20470083
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgat--gtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatc 280  Q
    ||||||||||||| |||| |||||| |||||||||||||||  || | ||| ||||  ||||||||||  ||||||| ||||| || |||  | ||  |     
T  20470306 tgttctctctagggtatgcttttcttttgttttgttatgatatgtatattgccatgaacaactaaaccactttgattagggttttaagatatagcccttt 20470207  T
Q  281 ttattttttggattctattaatgaagtttttattaagttatcattttctttgtgtctga-ttaattcgttcttgctttttcttaatacgctttcaattga 379  Q
    |||||| |||||||| | |||| | |||| |||||||||||  ||||| ||||||  || ||||||||||||||||| | |||||| |  |||||| |||    
T  20470206 ttatttcttggattcaactaataatgtttatattaagttat-gttttc-ttgtgttcgatttaattcgttcttgcttgtgcttaatgctttttcaactga 20470109  T
Q  380 gaatcagtatcaataatcttgaaaat 405  Q
    ||||| |||||  |||||||||||||    
T  20470108 gaatccgtatcggtaatcttgaaaat 20470083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 311
Target Start/End: Original strand, 7493863 - 7493990
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    ||||||||||||| ||||||||||||||||| | ||||||||| ||||| ||||  |||||||||||  |||||| ||  |  |||| ||||||  ||||    
T  7493863 tgttctctctagggtatgtttttctattgttattttatgatgtatgttgccatgaccaactaaacct-cttgattaggaatacacgacgaaccccttctt 7493961  T
Q  283 attttttggattctattaatgaagttttt 311  Q
    |||| ||| | | ||||||||||||||||    
T  7493962 atttgttgaaatttattaatgaagttttt 7493990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 192
Target Start/End: Original strand, 7709948 - 7710035
Alignment:
Q  105 ttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaatccatggcagaggatctccatcctccccctgttctctct 192  Q
    |||||||||||| |||| |||||||||||||||||||||||||| ||| |||| | || | |||||||||| |||   ||||||||||    
T  7709948 ttattcattcagaaatctaacggttcaaggcaagggtcaagcattagagtccaagacaaatgatctccatcttcctattgttctctct 7710035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 9552676 - 9552773
Alignment:
Q  130 caaggcaagggtcaagcatcagaatc--catggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgt 225  Q
    |||||||||||||||||||||  | |  || || |||||||||||||| ||| | ||||||||||||| ||| |||||||||| |||||| |||||||    
T  9552676 caaggcaagggtcaagcatcaagagcttcaaggaagaggatctccatcatcctcttgttctctctagggtatatttttctattattttgtgatgatgt 9552773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 191 - 321
Target Start/End: Complemental strand, 20040345 - 20040216
Alignment:
Q  191 ctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttg 290  Q
    ||||| ||||||||| | ||||||||||||||||| ||||  |||| |||| |||||||  |||||| |||||| || ||||||||  |||||||| ||     
T  20040345 ctagggtatgtttttattttgttttgttatgatgtatgtttccatgagcaaataaacct-cttgattagggttcaactatgaaccccttcttatttgtta 20040247  T
Q  291 gattctattaatgaagtttttattaagttat 321  Q
    ||||| | |||| ||||||| ||| ||||||    
T  20040246 gattcaactaataaagttttcattcagttat 20040216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 20446811 - 20446861
Alignment:
Q  197 tatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaac 247  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||||||||||    
T  20446811 tatgtttttctattgttttgttatgatgtatgttgccatgagcaactaaac 20446861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 9801106 - 9801169
Alignment:
Q  162 agaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgt 225  Q
    |||||||||||||||||| | ||||||||||||| | |||||||| ||| |||||| |||||||    
T  9801106 agaggatctccatcctcctcttgttctctctagggtgtgtttttcaattattttgtaatgatgt 9801169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 17880493 - 17880418
Alignment:
Q  162 agaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgt 237  Q
    ||||||||||||||||||   ||||||||||| | ||||||||  |||| |||||| ||||||||||||| |||||    
T  17880493 agaggatctccatcctcctattgttctctctatggtatgttttattattattttgtaatgatgtttgttgccatgt 17880418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 15757985 - 15758051
Alignment:
Q  159 ggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgt 225  Q
    |||||||||||| |||| ||| | |||| |||||||||||| |||||||||| |||||| |||||||    
T  15757985 ggcagaggatcttcatcatcctcttgttatctctaggatatatttttctattattttgtaatgatgt 15758051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 314
Target Start/End: Complemental strand, 21544400 - 21544291
Alignment:
Q  202 ttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaa 301  Q
    |||||||||||||||| ||||| |  |||   ||| |||||||||| | ||||||| |||||| | |||||||||  |||||||| |||||||| ||||     
T  21544400 ttttctattgttttgtaatgatataggtt---atgagcaactaaacttctttgattagggttccatgatgaaccccttcttatttgttggattccattac 21544304  T
Q  302 tgaagtttttatt 314  Q
    | |||||||||||    
T  21544303 taaagtttttatt 21544291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 286
Target Start/End: Original strand, 7151461 - 7151561
Alignment:
Q  185 ttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttat 284  Q
    |||| |||||| ||||||||| |||| | |||||||||||  ||||| |||| ||||||||||||  |||||| |||||| | |||||| ||| ||||||    
T  7151461 ttctgtctagggtatgtttttatattatattgttatgatgcatgttgccatgagcaactaaacct-cttgattagggttccatgatgaaaccattcttat 7151559  T
Q  285 tt 286  Q
    ||    
T  7151560 tt 7151561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 202 - 319
Target Start/End: Complemental strand, 21537059 - 21536942
Alignment:
Q  202 ttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaa 301  Q
    |||||||||||||||| ||||| |  |||| |||| |||||||||| ||||||||| |||||| |  |||||| |  ||||||||  ||||||| ||||     
T  21537059 ttttctattgttttgtaatgatatcagttgccatgagcaactaaacttatttgattagggttccattatgaactccttcttatttgatggattccattac 21536960  T
Q  302 tgaagtttttattaagtt 319  Q
    | ||||| ||||| ||||    
T  21536959 taaagttcttattcagtt 21536942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 311
Target Start/End: Complemental strand, 11467605 - 11467482
Alignment:
Q  188 tctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctat-ttgatttgggttctacgatgaacccaatcttattt 286  Q
    |||||||| ||||||||  ||||||||||| ||||||| | |||| ||||||||||||| || | ||||||  ||||| || ||| |||   ||||||||    
T  11467605 tctctagggtatgtttta-tattgttttgtaatgatgtattttgttatgtgcaactaaatctctcttgattaaggttccacaatggacctcttcttattt 11467507  T
Q  287 tttggattctattaatgaagttttt 311  Q
     |||||||| |||||| ||||||||    
T  11467506 gttggattcaattaatcaagttttt 11467482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 18468252 - 18468189
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaa 246  Q
    |||||||| |||| ||||||||||||||||||| ||||||  ||||||| |||  |||||||||    
T  18468252 tgttctctttagggtatgtttttctattgttttcttatgacatttgttgccataagcaactaaa 18468189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 202 - 319
Target Start/End: Complemental strand, 7326497 - 7326379
Alignment:
Q  202 ttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctat-ttgatttgggttctacgatgaacccaatcttattttttggattctatta 300  Q
    |||||| || |||||| ||||||||||||| |||||| |||||||||| | || ||| |||||| |||||||||     ||||||| |||||||  ||||    
T  7326497 ttttctcttattttgtaatgatgtttgttgccatgtgtaactaaacctctctttattagggttccacgatgaacatgtacttatttgttggatttaatta 7326398  T
Q  301 atgaagtttttattaagtt 319  Q
    || |||||| |||| ||||    
T  7326397 ataaagtttctatttagtt 7326379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 9071010 - 9071048
Alignment:
Q  185 ttctctctaggatatgtttttctattgttttgttatgat 223  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  9071010 ttctctctaaggtatgtttttctattgttttgttatgat 9071048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 201 - 302
Target Start/End: Original strand, 18467111 - 18467213
Alignment:
Q  201 tttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctat-ttgatttgggttctacgatgaacccaatcttattttttggattctatt 299  Q
    ||||||||||||||||| ||||||| ||||  |||| |||| ||||||| | ||||||  ||||| ||||| |||||  |||||||  |||||||| |||    
T  18467111 tttttctattgttttgtaatgatgtatgttaccatgcgcaattaaacctctcttgattatggttcaacgataaaccccttcttattagttggattcaatt 18467210  T
Q  300 aat 302  Q
    |||    
T  18467211 aat 18467213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 321
Target Start/End: Complemental strand, 20050498 - 20050369
Alignment:
Q  191 ctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttg 290  Q
    ||||| ||||||||| | || | |||||||||||| ||||  |||| |||| |||||||  |||||| |||||| || ||||||||  |||||||| ||     
T  20050498 ctagggtatgtttttattttatgttgttatgatgtatgtttccatgagcaaataaacct-cttgattagggttccactatgaaccccttcttatttgtta 20050400  T
Q  291 gattctattaatgaagtttttattaagttat 321  Q
    ||||| | |||| ||||||| ||| ||||||    
T  20050399 gattcaactaataaagttttcattcagttat 20050369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 152
Target Start/End: Complemental strand, 26839778 - 26839749
Alignment:
Q  123 aacggttcaaggcaagggtcaagcatcaga 152  Q
    ||||||||||||||||||||||||||||||    
T  26839778 aacggttcaaggcaagggtcaagcatcaga 26839749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 105 - 295
Target Start/End: Complemental strand, 11369 - 11178
Alignment:
Q  105 ttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaat-ccatggcagaggatctccatcctccccctgttctctctaggatatgttt 203  Q
    |||||||||||| || | |||| | ||||||||||||||||||||| | | ||| || ||||||| |||||||||| | ||||||||||||  |||||||    
T  11369 ttattcattcagaaagctaacgttacaaggcaagggtcaagcatcaaagttccaaggtagaggatatccatcctcctcttgttctctctagtgtatgttt 11270  T
Q  204 ttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattc 295  Q
    |||||||||||||| | ||||| ||||  |||||||| |||||||| ||||||| |||||||| || ||||| | |||||||||||||||||    
T  11269 ttctattgttttgtaacgatgtatgtttccatgtgcacctaaacctctttgattagggttctaagaagaacctattcttattttttggattc 11178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 99 - 293
Target Start/End: Complemental strand, 8345 - 8150
Alignment:
Q  99 acattcttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaat-ccatggcagaggatctccatcctccccctgttctctctaggat 197  Q
    ||||| |||||||||||| || | || | | ||| ||||||||||||||||||| | ||| || ||||||| |||||||||| | ||||||||||||  |    
T  8345 acatttttattcattcagaaagctaatgttacaacgcaagggtcaagcatcagagttccaaggtagaggatatccatcctcctcttgttctctctagtgt 8246  T
Q  198 atgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggat 293  Q
    |||||||||||||||||||| |  |||| ||||  ||||||||||||||||||||||||| |||||| | || |||||   |||||||||||||||    
T  8245 atgtttttctattgttttgtaacaatgtatgtttccatgtgcaactaaacctatttgattagggttcgaagaagaacctcttcttattttttggat 8150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 5e-35; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 105 - 295
Target Start/End: Complemental strand, 30850662 - 30850471
Alignment:
Q  105 ttattcattcaggaatccaacggttcaaggcaagggtcaagcatcaga-atccatggcagaggatctccatcctccccctgttctctctaggatatgttt 203  Q
    |||||||||||| || | | |||| ||||||||||||||| ||| ||| ||  | |||||||||||||||||||||   ||||||||||||| |||||||    
T  30850662 ttattcattcagaaagctagcggtacaaggcaagggtcaaacataagagatttaaggcagaggatctccatcctcctattgttctctctagggtatgttt 30850563  T
Q  204 ttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattc 295  Q
    |||||||||||||| ||| |||| |||||||||||||||||||||| |||||||  ||||  | ||||||| |  ||||||||||| |||||    
T  30850562 ttctattgttttgtaatgttgttagttgtcatgtgcaactaaacctctttgattaaggtttcaagatgaactccttcttatttttttgattc 30850471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 98 - 272
Target Start/End: Complemental strand, 16051915 - 16051739
Alignment:
Q  98 cacattcttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaatcc-atggcagaggatctccatcctccccctgttctctctagga 196  Q
    |||||||||||||||| || || | |||||||||||| ||||||||| ||| ||| | | | || |||||||||| ||||||    ||||||||||||||    
T  16051915 cacattcttattcattaagaaagctaacggttcaaggaaagggtcaaccattagagttctaaggtagaggatctctatcctcattttgttctctctagga 16051816  T
Q  197 tatgttttt-ctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatga 272  Q
    ||||||||| |||||||||||||||||||||||||| |||||| |||||||||| ||| ||| ||||| || |||||    
T  16051815 tatgttttttctattgttttgttatgatgtttgttgccatgtgaaactaaacctctttaattagggttttaagatga 16051739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 99 - 314
Target Start/End: Original strand, 12957009 - 12957224
Alignment:
Q  99 acattcttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaatccatggcagaggatctccatcctccccctgttctctctaggata 198  Q
    |||||||||||||||||| || | |||  |||||| |||| ||||| ||||||| || | |||| | ||||| |||| ||  | |||||||| |||| ||    
T  12957009 acattcttattcattcagaaagctaacaattcaagacaagagtcaaacatcagagtcaaaggcacaagatcttcatcatcatcttgttctctatagggta 12957108  T
Q  199 tgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctat 298  Q
    |||||||||| |||||||||||||||||| ||  ||||||||||||||||| ||||||| || |||||  |||||  |  |||||||| |||||||  ||    
T  12957109 tgtttttctaatgttttgttatgatgtttattaccatgtgcaactaaacctctttgattaggattctaaaatgaatgccttcttatttgttggatttcat 12957208  T
Q  299 taatgaagtttttatt 314  Q
    |||| |||||| ||||    
T  12957209 taataaagtttgtatt 12957224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 125 - 414
Target Start/End: Original strand, 24120785 - 24121071
Alignment:
Q  125 cggttcaaggcaagggtcaagcatcagaat-ccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgat 223  Q
    ||||| ||| |||||| ||||||||||| | ||| ||||||||||||| ||||||| | ||||||||||| | ||| |||||  |||||||  | |||||    
T  24120785 cggtttaagccaagggccaagcatcagagttccaaggcagaggatctctatcctcctcttgttctctctacggtattttttta-attgtttgttaatgat 24120883  T
Q  224 gtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatgaagtttttattaagttatca 323  Q
    || ||||| ||||  ||||||||||| ||||||  |||||| | ||||||| |  |||||||| |||||||| |||||| || |||| ||| ||||||||    
T  24120884 gtatgttgccatg--caactaaacctctttgatcagggttccaagatgaactccttcttatttgttggattccattaataaaattttcattcagttatca 24120981  T
Q  324 ttttctttgtgtctga-ttaattcgttcttgctttttcttaatacgctttcaattgagaatcagtatcaataatcttgaaaatcgatccgta 414  Q
     |||| ||||||| || |||||| || ||||| | ||||||||    ||||||||||||||| ||||| ||||| || ||||| ||||||||    
T  24120982 atttc-ttgtgtcagatttaatttgtacttgcatgttcttaatgttttttcaattgagaatctgtatcgataat-ttaaaaattgatccgta 24121071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 130 - 319
Target Start/End: Original strand, 11437929 - 11438119
Alignment:
Q  130 caaggcaagggtcaagcatcagaatc--catggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgttt 227  Q
    |||||||||||||||||||||  | |  ||  |||||||||||||||||| | | |||||||| |||| ||||||||| |||||| |||| ||||||| |    
T  11437929 caaggcaagggtcaagcatcatgagcttcaaagcagaggatctccatccttctcttgttctctgtagggtatgtttttttattgtcttgtaatgatgtat 11438028  T
Q  228 gttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatgaagtttttattaagtt 319  Q
     ||  ||||||||||||| | | ||||| || ||||  |||||||||||  |||||||| ||||||||||||||| |||| |||||| ||||    
T  11438029 atttccatgtgcaactaagcatctttga-ttaggtttaacgatgaaccccttcttatttgttggattctattaataaagtatttattcagtt 11438119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 163 - 309
Target Start/End: Complemental strand, 24927405 - 24927258
Alignment:
Q  163 gaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctat-ttgatttggg 261  Q
    |||||||| |||||||||| |||||||| |||| ||||||||||||||||||||| ||||||    |||  ||| |||||| ||||| | | ||||||||    
T  24927405 gaggatcttcatcctccccttgttctctttagggtatgtttttctattgttttgtaatgatgccatttgctatgagcaactgaacctctctcgatttggg 24927306  T
Q  262 ttctacgatgaacccaatcttattttttggattctattaatgaagttt 309  Q
    ||||| |||||||  | ||||||||||||||||| |||||| ||||||    
T  24927305 ttctaagatgaacttattcttattttttggattcaattaataaagttt 24927258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 172 - 405
Target Start/End: Original strand, 32239837 - 32240069
Alignment:
Q  172 catcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatg 271  Q
    |||||||| | |||||| |||||   |||||||||||||| ||||||||||||| ||||||  || ||||||||||||  |||||| ||||| || ||||    
T  32239837 catcctcctcttgttctttctagagcatgtttttctattgatttgttatgatgtctgttgttgtgagcaactaaacct-cttgattagggttttaagatg 32239935  T
Q  272 aacccaatcttattttttggattctattaatgaagtttttattaagttatcattttctttgtgtctga-ttaattcgttcttgctttttcttaatacgct 370  Q
    ||||   |||||||| |||||||| |||||| |||||| ||||   ||||  ||||| ||||||  || ||||||||||||||  | | |||||| |  |    
T  32239936 aacctcttcttatttgttggattcaattaataaagtttatattcgattatgtttttc-ttgtgttcgagttaattcgttcttgtctatgcttaatgcttt 32240034  T
Q  371 ttcaattgagaatcagtatcaataatcttgaaaat 405  Q
    || ||||||||||| |||||| |||||||||||||    
T  32240035 tttaattgagaatccgtatcagtaatcttgaaaat 32240069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 105 - 314
Target Start/End: Original strand, 18771437 - 18771648
Alignment:
Q  105 ttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaatc--catggcagaggatctccatcctccccctgttctctctaggatatgtt 202  Q
    ||||||||| || |||||| || | |||||||| ||||||||||||| | |  || || ||| |||||||||||||    ||||||||||||  ||| ||    
T  18771437 ttattcatttagaaatccatcgatacaaggcaatggtcaagcatcaggagcttcaaggtagatgatctccatcctcattttgttctctctagagtatctt 18771536  T
Q  203 tttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaat 302  Q
    ||||||||||||||| |||||||  |||| ||||   |||||| ||| ||||||| || ||| |||||||| ||  |||||||| ||||||||| |||||    
T  18771537 tttctattgttttgtaatgatgtcggttgccatgataaactaatcctctttgattaggattccacgatgaagcccttcttatttgttggattcttttaat 18771636  T
Q  303 gaagtttttatt 314  Q
     ||| |||||||    
T  18771637 aaagcttttatt 18771648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 311
Target Start/End: Complemental strand, 28900853 - 28900727
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||   || ||||||||||||  |||| || ||||| |||||||||||  ||||    
T  28900853 tgttctctctaggatatgtttttctattgttttgttatgatgtctgttgcactgagcaactaaacct-cttga-ttcggttccacgatgaaccccttctt 28900756  T
Q  283 attttttggattctattaatgaagttttt 311  Q
    |||| ||| ||  ||||||| ||||||||    
T  28900755 atttgttgaatattattaataaagttttt 28900727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 130 - 311
Target Start/End: Complemental strand, 27085154 - 27084973
Alignment:
Q  130 caaggcaagggtcaagcatcagaa-tccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttg 228  Q
    |||| |||||||||||||||| || | || | ||||||||||||||||||| | |||||||  || | ||||||||| ||||||||| | | |||||  |    
T  27085154 caagtcaagggtcaagcatcaaaacttcaagacagaggatctccatcctcctcttgttctcattaag-tatgtttttatattgttttttaacgatgtcgg 27085056  T
Q  229 ttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatgaagttttt 311  Q
    |||||||| |||||||||||| ||||||| ||| |  |||||||||||  | |||||| ||||| || |||||| ||||||||    
T  27085055 ttgtcatgagcaactaaacctctttgattagggcttcacgatgaacccttttttatttgttggactcaattaataaagttttt 27084973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 130 - 302
Target Start/End: Original strand, 5154305 - 5154476
Alignment:
Q  130 caaggcaagggtcaagcatcagaa-tccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttg 228  Q
    ||||||||||| ||| |||||||| |  | || |||||||||||||||| |   ||||| ||||| | ||| |||||||  |||||||  |||||||  |    
T  5154305 caaggcaagggccaaccatcagaactttaaggtagaggatctccatccttcttttgttcactctacggtatatttttct--tgttttgcaatgatgtcgg 5154402  T
Q  229 ttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaat 302  Q
    |||||||| ||||||||||||||||||||  ||||| |||||||||||  | |||||| |||||||| ||||||    
T  5154403 ttgtcatgagcaactaaacctatttgattaaggttccacgatgaaccccttattatttgttggattcaattaat 5154476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 197 - 311
Target Start/End: Complemental strand, 11308347 - 11308234
Alignment:
Q  197 tatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattct 296  Q
    |||||||||||||| ||||||||||||||||||||||||| |||| ||||||| |||||    ||||| | |||||||||  |||||||| ||||||  |    
T  11308347 tatgtttttctattattttgttatgatgtttgttgtcatgagcaaataaacct-tttgaaaaaggttccaagatgaaccccttcttatttgttggatatt 11308249  T
Q  297 attaatgaagttttt 311  Q
    |||||| ||||||||    
T  11308248 attaataaagttttt 11308234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 319
Target Start/End: Complemental strand, 29046816 - 29046699
Alignment:
Q  201 tttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctatta 300  Q
    |||| ||||| |||||||||||||||||||| |||| | ||||||| || ||||||| |||||| |||||||||||  |||||||| ||||| | |||||    
T  29046816 ttttactattattttgttatgatgtttgttgccatgagaaactaaatct-tttgattagggttccacgatgaaccccttcttatttgttggaatttatta 29046718  T
Q  301 atgaagtttttattaagtt 319  Q
    || ||||||| ||| ||||    
T  29046717 ataaagttttcattcagtt 29046699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 291
Target Start/End: Original strand, 13304984 - 13305091
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||  |||| |||  ||||||||||||  |||||| || |||||||||||||||  ||||    
T  13304984 tgttctctctagggtatatttttctattgttttcttatgatgtcggttgccataagcaactaaacct-cttgattaggtttctacgatgaaccccttctt 13305082  T
Q  283 attttttgg 291  Q
    |||| ||||    
T  13305083 atttgttgg 13305091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 192 - 315
Target Start/End: Complemental strand, 13583133 - 13583010
Alignment:
Q  192 taggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttgg 291  Q
    |||| |||||||||| |||||||||| |||||||||||||||||| | ||||||| || ||| ||| |||||| || ||||| ||  |||||| | ||||    
T  13583133 tagggtatgtttttccattgttttgtaatgatgtttgttgtcatgagtaactaaatctctttcattagggttccacaatgaaacccttcttatatgttgg 13583034  T
Q  292 attctattaatgaagtttttatta 315  Q
    ||||  ||||  ||||||||||||    
T  13583033 attcagttaacaaagtttttatta 13583010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 15213300 - 15213170
Alignment:
Q  171 ccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgat 270  Q
    ||||||||| | |||||| |||||| |||||||||| ||| |||||||||||||||||||  |||| |||||||||| |  ||||||  ||||||| |||    
T  15213300 ccatcctcctcatgttctttctagggtatgtttttcaattattttgttatgatgtttgtttccatgagcaactaaacat-cttgattatggttctaagat 15213202  T
Q  271 gaacccaatcttattttttggattctattaat 302  Q
    ||| ||  |||||| | |||||||| ||||||    
T  15213201 gaatcccttcttatctgttggattcaattaat 15213170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 126 - 307
Target Start/End: Original strand, 24094685 - 24094864
Alignment:
Q  126 ggttcaaggcaagggtcaagcatcagaatc-catggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatg 224  Q
    ||||||||||||||||||| ||||| | |  || ||||||  ||||| ||||||| | |||| | |||||  ||||||| |||||||||||||||| |||    
T  24094685 ggttcaaggcaagggtcaaacatcaaagtttcaaggcaga--atctctatcctcctcttgttttgtctagagtatgtttctctattgttttgttatcatg 24094782  T
Q  225 tttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatgaagt 307  Q
    ||||||  |||| ||||||||||||  ||||||  ||||||| ||| || ||  |||||||| |||||||| |||||| ||||    
T  24094783 tttgtttccatgagcaactaaacct-cttgattacggttctaagattaatcccttcttatttgttggattcaattaataaagt 24094864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 6887735 - 6887645
Alignment:
Q  183 tgttctctctaggatatgtttttc-tattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatga 272  Q
    |||||| |||| | |||||||||| ||||||||||| |||||||  |||| ||||||||||||||||| ||||||| |||||| |||||||    
T  6887735 tgttctatctaaggtatgtttttcctattgttttgtaatgatgtcggttgccatgtgcaactaaacctctttgattagggttccacgatga 6887645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 311
Target Start/End: Complemental strand, 28260079 - 28259944
Alignment:
Q  174 tcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaa 273  Q
    |||||| | ||||||||||| | |||||||||||||| |||| | |||||||  ||||||| |||| ||||||||  ||||||| |||||||| ||||||    
T  28260079 tcctcctcttgttctctctatggtatgtttttctattattttatgatgatgtcagttgtcacgtgccactaaacc--tttgattagggttctaggatgaa 28259982  T
Q  274 cccaatcttattttttggattctattaatgaagttttt 311  Q
    ||   ||||||||  | ||||| |||||| ||||||||    
T  28259981 cctcttcttatttgatagattcaattaataaagttttt 28259944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 256
Target Start/End: Complemental strand, 12774393 - 12774320
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgat 256  Q
    ||||||||||||  ||||||||||||||||||||| ||||||   |||| ||||||||||||||||| ||||||    
T  12774393 tgttctctctagattatgtttttctattgttttgtaatgatgaaggttgccatgtgcaactaaacctctttgat 12774320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 311
Target Start/End: Original strand, 28075048 - 28075204
Alignment:
Q  157 atggcagaggatctccatcctccccctgttctctctaggatatg-tttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctat-ttg 254  Q
    ||||||||||||||| ||||||| | ||||||  ||||| |||| ||||| ||||||||||| ||||| |   ||| |||||| ||||||| || |  ||    
T  28075048 atggcagaggatctctatcctcctcttgttcttactagggtatgttttttatattgttttgtaatgatatcacttgccatgtggaactaaatctctcatg 28075147  T
Q  255 atttgggttctacgatgaacccaatcttattttttggattctattaatgaagttttt 311  Q
    ||| |||||| ||||||||| |  |||||||| |||||||| |||||| ||||||||    
T  28075148 attagggttccacgatgaactccttcttatttattggattcaattaataaagttttt 28075204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 302
Target Start/End: Complemental strand, 28290914 - 28290779
Alignment:
Q  164 aggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggtt 263  Q
    ||||||||||||||||   || |||||||||| | || |||||| |||||||||  || ||  |||||| |||||||||||||||  ||| ||| |||||    
T  28290914 aggatctccatcctcctattgctctctctagggtgtggttttcttttgttttgtattgttgcatgttgtgatgtgcaactaaacc--ttttattagggtt 28290817  T
Q  264 ctacgatgaacccaatcttattttttggattctattaat 302  Q
     |||||||||||| | ||||||| |||||||| ||||||    
T  28290816 atacgatgaacccta-cttatttgttggattcaattaat 28290779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 314
Target Start/End: Original strand, 23876529 - 23876657
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    |||||| |||| | ||||||||||||||||||||| ||||||| ||||  |||| |||||||||||| |   ||| ||| || | |||||| |   ||||    
T  23876529 tgttctatctacggtatgtttttctattgttttgtaatgatgtatgtttccatgcgcaactaaacctct---attagggctcgaagatgaatcacttctt 23876625  T
Q  283 attttttggattctattaatgaagtttttatt 314  Q
    |||| |||||||| |||||| |||||||||||    
T  23876626 atttgttggattcaattaataaagtttttatt 23876657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 30544292 - 30544407
Alignment:
Q  159 ggcagaggatctccatcctccccctgttctctctaggatatgtttttct-attgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatt 257  Q
    |||| ||||||| |||||||| | |||| ||| || ||||| ||||| | |||||||||| |||||| | |||| |||| |||||| |||||||||||||    
T  30544292 ggcataggatcttcatcctcctcttgttttctttatgatattttttttttattgttttgtaatgatggtggttgccatgagcaactgaacctatttgatt 30544391  T
Q  258 tgggttctacgatgaa 273  Q
     |||||| | ||||||    
T  30544392 agggttccatgatgaa 30544407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 274
Target Start/End: Complemental strand, 22892770 - 22892678
Alignment:
Q  183 tgttctctctaggatatgtttttcta--ttgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaac 274  Q
    ||||||||||||| ||||||||||||  || ||||||| |||||| ||||| |||| ||||||||||||  |||||| |||||| | |||||||    
T  22892770 tgttctctctagggtatgtttttctatttttttttgttctgatgtctgttgccatgagcaactaaacct-cttgattagggttccaagatgaac 22892678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 23893663 - 23893735
Alignment:
Q  164 aggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatg 236  Q
    ||||||||||||||||   ||||||||||||  || ||| |||||||||||||||||| ||| ||||| ||||    
T  23893663 aggatctccatcctcctattgttctctctagagtaggttattctattgttttgttatgttgtatgttgccatg 23893735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 152
Target Start/End: Complemental strand, 22892827 - 22892799
Alignment:
Q  124 acggttcaaggcaagggtcaagcatcaga 152  Q
    |||||||||||||||||||||||||||||    
T  22892827 acggttcaaggcaagggtcaagcatcaga 22892799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 27118246 - 27118198
Alignment:
Q  228 gttgtcatgtgcaactaaacctatttgatttgggttctacgatgaaccc 276  Q
    ||||||||| ||||||||| || ||||| | ||||||||||||||||||    
T  27118246 gttgtcatgagcaactaaatctctttgagtagggttctacgatgaaccc 27118198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 311
Target Start/End: Original strand, 29292439 - 29292566
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    ||||||||||||| | | ||||| ||||||| ||| ||||||   ||||||||||||| |||||||| | |||| || |||| || ||||||||  ||||    
T  29292439 tgttctctctagggtgttttttt-tattgttctgtaatgatgccggttgtcatgtgcatctaaacctctatgatatgagttccacaatgaaccctttctt 29292537  T
Q  283 attttttggattctattaatgaagttttt 311  Q
    || | ||| |||| |||||| || |||||    
T  29292538 atatgttgaattcaattaataaatttttt 29292566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 8e-31; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 126 - 341
Target Start/End: Complemental strand, 16622226 - 16622012
Alignment:
Q  126 ggttcaaggcaagggtcaagcatcagaat-ccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatg 224  Q
    ||||||||||||| ||||||||| ||| | ||| | | |||| |||||||||| | | |||||||| |||| |||||||||||||||||||||||||  |    
T  16622226 ggttcaaggcaagagtcaagcattagagttccaagactgagggtctccatccttctcttgttctctttagggtatgtttttctattgttttgttatggcg 16622127  T
Q  225 tttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaatgaagtttttattaagttatcat 324  Q
    | ||||||||||||||||||||||| ||| ||| |||||| | || ||||||  |||| ||| |||||||  |||||| |||||| |||| ||||||  |    
T  16622126 tatgttgtcatgtgcaactaaacctctttaattagggttcgaagaagaaccc-ttcttgtttgttggatttcattaataaagtttatattcagttatgtt 16622028  T
Q  325 tttctttgtgtctgatt 341  Q
    |||| ||||||||||||    
T  16622027 tttc-ttgtgtctgatt 16622012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 131 - 294
Target Start/End: Original strand, 20695161 - 20695325
Alignment:
Q  131 aaggcaagggtcaagcatcagaa-tccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgt 229  Q
    |||||||||||||||||||  || | || ||||  |||||| |||||||  | | ||||||||||| ||||||||||||||||||||| ||||||| ||     
T  20695161 aaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgc 20695260  T
Q  230 tgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggatt 294  Q
    || |||||||||||||| || ||||||| ||||||||||||||||||  |||||||| |||||||    
T  20695261 tgccatgtgcaactaaaactctttgattagggttctacgatgaaccccttcttatttgttggatt 20695325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 159 - 414
Target Start/End: Complemental strand, 17381558 - 17381303
Alignment:
Q  159 ggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgattt 258  Q
    |||||||||||||||||||||   ||||||||||||| ||||| ||| ||||||||| | ||||||||||||| ||| ||||||||||||| ||| ||||    
T  17381558 ggcagaggatctccatcctccttttgttctctctagggtatgtatttatattgttttataatgatgtttgttgccatatgcaactaaacctctttaattt 17381459  T
Q  259 gggttctacgatgaacccaatcttattttttggattctattaatgaagtttttattaagttatcattttctttgtgtctga-ttaattcgttcttgcttt 357  Q
     | ||  | |||||| ||  |||||||| |||||||| |||||| ||||||| ||| |  |||  ||||| |||||||||| |||||| || ||||| |     
T  17381458 agttttcaagatgaatcccttcttatttgttggattcaattaataaagttttcattcaaatatgcttttc-ttgtgtctgatttaatttgtacttgcatg 17381360  T
Q  358 ttcttaatacgctttcaattgagaatcagtatcaataatcttgaaaatcgatccgta 414  Q
    ||||||||    ||||||||||||||  ||||   ||| ||||||||| ||||||||    
T  17381359 ttcttaatgttttttcaattgagaattcgtattggtaaacttgaaaattgatccgta 17381303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 25594241 - 25594109
Alignment:
Q  126 ggttcaaggcaagggtcaagcatcagaa-tccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatg 224  Q
    |||||||||||||||| || |||||||  |||| || ||||| ||| |||||||| | ||||||||||| ||||||||||||||||||||||||||||||    
T  25594241 ggttcaaggcaagggttaaacatcagagctccaaggaagagggtcttcatcctcctcttgttctctctaagatatgtttttctattgttttgttatgatg 25594142  T
Q  225 tttgttgtcatgtgcaactaaacctatttgatt 257  Q
    |||||||  ||| | |||||||||| |||||||    
T  25594141 tttgttgcaatgagtaactaaacctctttgatt 25594109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 183 - 414
Target Start/End: Complemental strand, 18451763 - 18451531
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||| ||||| |||||||||||| ||| ||| ||||  || |||||||||  ||||    
T  18451763 tgttctctctaggatatgtttttctattgttttgtttttatgtctgttttcatgagcaactaaacctctttaattagggtgataagatgaaccctttctt 18451664  T
Q  283 attttttggattctattaatgaagtttttattaagttatcattttctttgtgtctgatt--aattcgttcttgctttttcttaatacgctttcaattgag 380  Q
    |||| ||||||||  | ||| ||||||| ||  ||||||  ||||   | |||| ||||  |||  |||||||||| | |||||| |  |||||||| ||    
T  18451663 atttgttggattcagtcaataaagttttaatccagttatgctttt-actatgtccgatttaaataagttcttgcttgtgcttaatgctttttcaattaag 18451565  T
Q  381 aatcagtatcaataatcttgaaaatcgatccgta 414  Q
    |||  |||||||||||||||||||| ||||||||    
T  18451564 aattcgtatcaataatcttgaaaattgatccgta 18451531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 183 - 314
Target Start/End: Complemental strand, 12265134 - 12265003
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    ||||||||||||  ||| ||||||||||||||||| ||||||| | |||||||| |||||||||||| ||||||| ||||| || |||||||||  ||||    
T  12265134 tgttctctctagtgtatatttttctattgttttgtaatgatgtgtattgtcatgagcaactaaacctctttgattagggttataagatgaaccccttctt 12265035  T
Q  283 attttttggattctattaatgaagtttttatt 314  Q
    ||||  |||||||| ||||| |||||| ||||    
T  12265034 atttaatggattctcttaataaagtttatatt 12265003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 159 - 319
Target Start/End: Original strand, 30791174 - 30791332
Alignment:
Q  159 ggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgattt 258  Q
    ||||||||||||  || |||| | |||||||||||||  ||| || ||||||| ||||| |||  || || |||||||||||||||||||| ||||||      
T  30791174 ggcagaggatcttgattctcctcttgttctctctagggcatgcttgtctattgctttgtaatg--gtatgctgtcatgtgcaactaaacctctttgatca 30791271  T
Q  259 gggttctacgatgaacccaatcttattttttggattctattaatgaagtttttattaagtt 319  Q
    |||||| ||||  |||||  ||||||||||||||||| |||||| ||||||||||| ||||    
T  30791272 gggttccacgagaaaccccttcttattttttggattcaattaataaagtttttattcagtt 30791332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 295
Target Start/End: Original strand, 20084081 - 20084193
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    ||||||||||||| ||||||||| |||| |||||| |||||| |||||  |||||||||||||| || ||||||| |||||| | |||||||||  ||||    
T  20084081 tgttctctctagggtatgtttttatattattttgtaatgatggttgttaccatgtgcaactaaatctctttgattagggttccatgatgaaccccttctt 20084180  T
Q  283 attttttggattc 295  Q
    |||| ||||||||    
T  20084181 atttgttggattc 20084193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 319
Target Start/End: Complemental strand, 18281762 - 18281605
Alignment:
Q  162 agaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttggg 261  Q
    |||||| ||||||| ||| | ||||||||||||| ||| |||||||||| || ||  |||||||  |||| |||| | |||||||||| ||||||| | |    
T  18281762 agaggacctccatcgtcctcttgttctctctagggtatatttttctatttttatgcaatgatgtcggttgccatgagtaactaaacctctttgattagcg 18281663  T
Q  262 ttctacgatgaacccaatcttattttttggattctattaatgaagtttttattaagtt 319  Q
    ||| |||| |||||   |||||||| ||||||||||||||| ||| ||||||| ||||    
T  18281662 ttccacgacgaaccacttcttatttgttggattctattaataaaggttttatttagtt 18281605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 130 - 302
Target Start/End: Complemental strand, 19763475 - 19763302
Alignment:
Q  130 caaggcaagggtcaagcatcagaa-tccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttg 228  Q
    ||||||||||||||| ||||| |  | || |||||||||||| |||||||| | ||||||||| ||| || ||||||||||  |||| | ||||||||||    
T  19763475 caaggcaagggtcaaacatcaaagcttcaaggcagaggatcttcatcctcctcttgttctctcaagggtaagtttttctatatttttataatgatgtttg 19763376  T
Q  229 ttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattctattaat 302  Q
    ||  ||||| ||||||||||| ||| ||| ||||||   ||||||| |  |||||||| |||||||| ||||||    
T  19763375 ttaacatgtacaactaaacctctttaattagggttccttgatgaactccttcttatttgttggattcaattaat 19763302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 278
Target Start/End: Original strand, 22930528 - 22930645
Alignment:
Q  162 agaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctat-ttgatttgg 260  Q
    ||||||||||||||||||   |||| |||||||| ||||||||||||||||||||| ||||||| || | || |||||||| |||||| | ||||||  |    
T  22930528 agaggatctccatcctccttttgttatctctaggttatgtttttctattgttttgtaatgatgtatgctatcgtgtgcaacaaaacctctcttgattaag 22930627  T
Q  261 gttctacgatgaacccaa 278  Q
    |||| |||||||||||||    
T  22930628 gttccacgatgaacccaa 22930645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 31340903 - 31340817
Alignment:
Q  159 ggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaac 247  Q
    ||||||||||||| ||||||  | ||||||||||   |||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  31340903 ggcagaggatctcaatcctcttcttgttctctctt--atatgtttttctattgttttgtaatgatgtatgttgtcatgtgcaactaaac 31340817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 183 - 295
Target Start/End: Original strand, 17028850 - 17028962
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    |||||||| |||| ||| ||||||||||| ||||| ||||||| ||||  ||||||||||||||||| ||||||  |||||||| ||||||||   ||||    
T  17028850 tgttctctttagggtatatttttctattgatttgtaatgatgtatgttaccatgtgcaactaaacctctttgatcagggttctaagatgaacctcttctt 17028949  T
Q  283 attttttggattc 295  Q
    |||| ||||||||    
T  17028950 atttgttggattc 17028962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 311
Target Start/End: Original strand, 22230329 - 22230457
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    |||||| |||||| |||||||||||| |||||| ||||||||||||||  || | |||||||||||| ||| ||| | |||| |||||||||||  |  |    
T  22230329 tgttctatctagggtatgtttttctactgttttcttatgatgtttgtttccacgagcaactaaaccttttttattagagttccacgatgaaccccttgct 22230428  T
Q  283 attttttggattctattaatgaagttttt 311  Q
    |||| ||||| | ||||||| ||||||||    
T  22230429 atttgttggaatttattaataaagttttt 22230457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 319
Target Start/End: Original strand, 24268676 - 24268810
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    |||||||| |||| ||||||||| ||||||||||||||||||| | ||| |||| ||||||||||||  |||||| || ||| |  ||||||||  ||||    
T  24268676 tgttctctttagggtatgtttttatattgttttgttatgatgtatattgccatgagcaactaaacct-cttgattaggattccaaaatgaaccc-ttctt 24268773  T
Q  283 attttttggattctattaatgaagtttttattaagtt 319  Q
    |||| ||||||||| ||||| ||||||| ||| ||||    
T  24268774 atttgttggattctgttaataaagttttcatttagtt 24268810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 319
Target Start/End: Original strand, 24345306 - 24345440
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    |||||||| |||| ||||||||| ||||||||||||||||||| | ||| |||| ||||||||||||  |||||| || ||| |  ||||||||  ||||    
T  24345306 tgttctctttagggtatgtttttatattgttttgttatgatgtatattgccatgagcaactaaacct-cttgattaggattccaaaatgaaccc-ttctt 24345403  T
Q  283 attttttggattctattaatgaagtttttattaagtt 319  Q
    |||| ||||||||| ||||| ||||||| ||| ||||    
T  24345404 atttgttggattctgttaataaagttttcatttagtt 24345440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 183 - 302
Target Start/End: Original strand, 20715165 - 20715283
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    |||||||| || |||||||||||||||||||||||| |||||||||||||| || ||||| ||||||  |||||| |||||  | ||||||| |  ||||    
T  20715165 tgttctctatatgatatgtttttctattgttttgttttgatgtttgttgtcttgagcaaccaaacct-cttgattagggtttcaagatgaactctttctt 20715263  T
Q  283 attttttggattctattaat 302  Q
    |||| ||||||  |||||||    
T  20715264 atttgttggatattattaat 20715283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 302
Target Start/End: Complemental strand, 12339563 - 12339447
Alignment:
Q  185 ttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttat 284  Q
    |||| ||||||  ||| ||||||||| |||||||||||| ||||||| |||| |||||||| |||  |||||| |||||| |||||||||||  ||||||    
T  12339563 ttctttctagggcatggttttctattattttgttatgatctttgttgccatgagcaactaatcct-cttgattagggttccacgatgaaccccttcttat 12339465  T
Q  285 tttttggattctattaat 302  Q
    || ||||| | |||||||    
T  12339464 ttattggaatttattaat 12339447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 26329581 - 26329532
Alignment:
Q  187 ctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatg 236  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  26329581 ctctctagggtatgtttttctattgttttgttatgatgtttgttgccatg 26329532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 293
Target Start/End: Complemental strand, 7742437 - 7742306
Alignment:
Q  161 cagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgg 260  Q
    |||||||||| |||| ||| | |||| |||| | | ||| |||||||| |||||| | |||||||  |||||||||||||||||||| | ||| ||| ||    
T  7742437 cagaggatcttcatcatcctcttgttttctcaatggtatatttttctactgttttctaatgatgtccgttgtcatgtgcaactaaacttctttaattagg 7742338  T
Q  261 gttctacgatgaacccaatcttattttttggat 293  Q
    |||| | |||||||||  |||||||| ||||||    
T  7742337 gttccaagatgaaccc-ttcttatttgttggat 7742306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 302
Target Start/End: Original strand, 24131213 - 24131333
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctat-ttgatttgggttctacgatgaacccaatct 281  Q
    |||||||||||||||||| |||| |||| |||||| |||||||  |||  |||||| |||||||||| | |||||| |||||| | ||||||||   | |    
T  24131213 tgttctctctaggatatgcttttatattattttgtaatgatgtcggttaccatgtgaaactaaacctctcttgattggggttccaagatgaacctcttat 24131312  T
Q  282 tattttttggattctattaat 302  Q
    ||||| |||||||| ||||||    
T  24131313 tatttgttggattcaattaat 24131333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 30072703 - 30072747
Alignment:
Q  186 tctctctaggatatgtttttctattgttttgttatgatgtttgtt 230  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||    
T  30072703 tctctctagggtatatttttctattgttttgttatgatgtttgtt 30072747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 275
Target Start/End: Complemental strand, 15694714 - 15694640
Alignment:
Q  201 tttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacc 275  Q
    ||||||||||||||||| |||||||  |||| |||||| || ||||||| ||||||| |||||| || |||||||    
T  15694714 tttttctattgttttgtaatgatgtcagttgccatgtgaaattaaacctctttgattagggttccacaatgaacc 15694640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 311
Target Start/End: Original strand, 24842268 - 24842395
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    |||||||||||   |||| |||||||||||||||||||||| | ||||||||||  ||| ||||| |  |||||| |||||| | |||||||||  ||||    
T  24842268 tgttctctctatagtatgcttttctattgttttgttatgatatatgttgtcatgaacaagtaaacat-cttgattagggttccaagatgaaccccttctt 24842366  T
Q  283 attttttggattctattaatgaagttttt 311  Q
    ||||  || ||  ||||||| ||||||||    
T  24842367 atttgatgaatattattaataaagttttt 24842395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 257
Target Start/End: Original strand, 18178704 - 18178797
Alignment:
Q  163 gaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatt 257  Q
    |||||||| |||||||| | ||||||||||||| ||| ||||| ||||||||||| || ||||  ||||  |||| | ||||||| |||||||||    
T  18178704 gaggatcttcatcctcctcttgttctctctagggtat-tttttttattgttttgtaataatgtcagttgcgatgtactactaaacttatttgatt 18178797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 201 - 275
Target Start/End: Original strand, 25945840 - 25945914
Alignment:
Q  201 tttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacc 275  Q
    ||||| |||| |||||| |||||||  ||| |||||| ||||||| |||||||||||  ||||||| ||||||||    
T  25945840 tttttttattattttgtaatgatgtcggttatcatgtacaactaagcctatttgattaaggttctaagatgaacc 25945914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 5265 - 5201
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaac 247  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  5265 tgttctctctaggatatgtttttctattgttttgttatgatgtatgttgtcatgagcaactaaac 5201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 152
Target Start/End: Complemental strand, 5322 - 5294
Alignment:
Q  124 acggttcaaggcaagggtcaagcatcaga 152  Q
    |||||||||||||||||||||||||||||    
T  5322 acggttcaaggcaagggtcaagcatcaga 5294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 161 - 313
Target Start/End: Complemental strand, 33296 - 33144
Alignment:
Q  161 cagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgg 260  Q
    |||||||||||| |||||    ||||||||||||  ||| ||||||||||||||||| |||||||  |||| ||||   |||||| ||| ||||||| ||    
T  33296 cagaggatctccgtcctcattttgttctctctagagtatctttttctattgttttgtaatgatgtcggttgccatgataaactaatcctctttgattagg 33197  T
Q  261 gttctacgatgaacccaatcttattttttggattctattaatgaagtttttat 313  Q
    |||| | |||||| ||  |||||||| ||||||||| ||||| ||||||||||    
T  33196 gttccatgatgaagcccttcttatttgttggattcttttaataaagtttttat 33144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 130 - 319
Target Start/End: Complemental strand, 11250 - 11059
Alignment:
Q  130 caaggcaagggtcaagcatcagaa-tccatggcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttg 228  Q
    |||||||||||| |||| |||||  | || |||||| ||| | |||||||| | ||||||||||| | ||| ||||||||||||||||| || || | ||    
T  11250 caaggcaagggttaagcttcagagcttcaaggcagatgattttcatcctcctcatgttctctctaaggtatatttttctattgttttgtgataatttatg 11151  T
Q  229 ttgtcatgtgcaactaaacc--tatttgatttgggttctacgatgaacccaatcttattttttggattctattaatgaagtttttattaagtt 319  Q
    ||| ||||||||||||||||  | ||| ||| |||||| |||||||||||  ||| |||| || ||||  |||||| ||||||||||| ||||    
T  11150 ttgccatgtgcaactaaaccttttttttattagggttccacgatgaaccc-ttctcatttgttagatttaattaatcaagtttttattcagtt 11059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 311
Target Start/End: Complemental strand, 2551 - 2424
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    |||| |||||||| |||| ||||||||| |||| ||||||| | ||||| |||| ||||||||||||  |||||| |||||| || ||||||||  ||||    
T  2551 tgttatctctagggtatgattttctattattttcttatgatatatgttgccatgagcaactaaacct-cttgattagggttccacaatgaaccccttctt 2453  T
Q  283 attttttggattctattaatgaagttttt 311  Q
    |||| ||||| | ||||||| || |||||    
T  2452 atttgttggaatttattaataaaattttt 2424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 311
Target Start/End: Complemental strand, 2716 - 2589
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    |||| |||||||| |||| ||||||||| |||| ||||||| | ||||| |||| ||||||||||||  |||||| |||||| || ||||||||  ||||    
T  2716 tgttatctctagggtatgattttctattattttcttatgatatatgttgccatgagcaactaaacct-cttgattagggttccacaatgaaccccttctt 2618  T
Q  283 attttttggattctattaatgaagttttt 311  Q
    |||| ||||| | ||||||| || |||||    
T  2617 atttgttggaatttattaataaaattttt 2589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0624 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0624
Description:

Target: scaffold0624; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 309
Target Start/End: Complemental strand, 4717 - 4607
Alignment:
Q  198 atgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttattttttggattcta 297  Q
    |||||||||||||||||||| ||||||||||||  || |  ||||||||||| ||||| || ||||||| ||||||||   |||||||| ||| ||| ||    
T  4717 atgtttttctattgttttgtaatgatgtttgttaccacgaacaactaaacctttttga-ttaggttctaagatgaaccatttcttatttgttgaatttta 4619  T
Q  298 ttaatgaagttt 309  Q
    ||||| ||||||    
T  4618 ttaataaagttt 4607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 8242 - 8344
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    ||||||||||||| ||| ||||||||||||||  |||||||||||||||  ||| ||||||||||||  || ||| |||||| | |||||||||  ||||    
T  8242 tgttctctctagggtatttttttctattgtttcattatgatgtttgttgctatgagcaactaaacct-cttaattagggttccaagatgaaccccttctt 8340  T
Q  283 attt 286  Q
    ||||    
T  8341 attt 8344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 301
Target Start/End: Original strand, 3708 - 3849
Alignment:
Q  160 gcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttg 259  Q
    |||||||||||||||||||| | ||||||||||||   ||| ||||||||| |||||| |||||||  |||  |||| ||||| |||| | |||| ||      
T  3708 gcagaggatctccatcctcctcttgttctctctagagaatgattttctattattttgtaatgatgtcggttaccatgagcaaccaaacttctttgtttat 3807  T
Q  260 ggttctacgatgaacccaatcttattttttggattctattaa 301  Q
    ||||| | ||||||||   |||||||| |||||||| |||||    
T  3808 ggttccaagatgaacctcttcttatttgttggattccattaa 3849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 227747 - 227691
Alignment:
Q  164 aggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttat 220  Q
    |||||||||||||||| | ||||||||||||  |||||||||| |||||||||||||    
T  227747 aggatctccatcctcctcttgttctctctagagtatgtttttcaattgttttgttat 227691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 313
Target Start/End: Complemental strand, 37106 - 36976
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatctt 282  Q
    |||||||| |||| |||||| |||||||||||| ||| |||| |||||| |||| ||||||||| || ||||||| |||||| || || | ||   ||||    
T  37106 tgttctctatagggtatgttcttctattgttttcttacgatgcttgttggcatgagcaactaaa-ctttttgattagggttccacaataagcctgttctt 37008  T
Q  283 attttttggattctattaa-tgaagtttttat 313  Q
    |||| ||||| | |||||| ||||||||||||    
T  37007 atttgttggagtttattaattgaagtttttat 36976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 311
Target Start/End: Original strand, 12841 - 12992
Alignment:
Q  160 gcagaggatctccatcctccccctgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttg 259  Q
    |||||||||||||||||||| | ||||||||||||   ||| ||||||||| |||||| |||||||  |||  |||| ||||| |||| | |||| ||      
T  12841 gcagaggatctccatcctcctcttgttctctctagagaatgattttctattattttgtaatgatgtcggtttccatgagcaaccaaacttgtttgtttat 12940  T
Q  260 ggttctacgatgaacccaatcttattttttggattctattaatgaagttttt 311  Q
    ||||| || |||| ||   |||||||| |||||||| |||||  ||||||||    
T  12941 ggttccacaatgagccacttcttatttgttggattccattaacaaagttttt 12992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 311
Target Start/End: Complemental strand, 22146 - 22021
Alignment:
Q  185 ttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaacctatttgatttgggttctacgatgaacccaatcttat 284  Q
    ||||||| ||| ||| | ||| ||||||||||||||||| | ||||| ||||  |||||||||||  |||||   ||||| | ||||||||| |||||||    
T  22146 ttctctccagggtatatatttttattgttttgttatgatttatgttgccatgaacaactaaacct-cttgatcatggttccatgatgaaccccatcttat 22048  T
Q  285 tttttggattctattaatgaagttttt 311  Q
    || ||||||  ||||||| ||||||||    
T  22047 ttgttggatattattaataaagttttt 22021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 175
Target Start/End: Original strand, 21885 - 21960
Alignment:
Q  100 cattcttattcattcaggaatccaacggttcaaggcaagggtcaagcatcagaatccatggcagaggatctccatc 175  Q
    ||||||||||||||||| || | || |||||||  |||||||||  ||||||| |||| |||||| ||||||||||    
T  21885 cattcttattcattcagaaagctaatggttcaaaacaagggtcacacatcagattccaaggcagatgatctccatc 21960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 37570 - 37633
Alignment:
Q  183 tgttctctctaggatatgtttttctattgttttgttatgatgtttgttgtcatgtgcaactaaa 246  Q
    ||||||||||||| |||||||||| |||||||||| |||| ||  |||| |||| |||||||||    
T  37570 tgttctctctagggtatgtttttcaattgttttgtaatgacgtcggttgccatgggcaactaaa 37633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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