View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18054_low_55 (Length: 297)
Name: NF18054_low_55
Description: NF18054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18054_low_55 |
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Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 6007517 - 6007793
Alignment:
| Q |
1 |
ataattctatcatttatatataatttaaacaattttcatctcttttttgcttaannnnnnngaaacattttctattactacaaatactttataaatactt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
6007517 |
ataattctatcatttatatataatttaaacaattttcatctcttttttgcttattttttttgaaacattttctattactacaaatactttataaatactt |
6007616 |
T |
|
| Q |
101 |
tgtaggtttattcacttgttattcttgctgacagaccattaaatactttttctcatattttgattgaaaattcgttttcatgtttcaactcatattggtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6007617 |
tgtaggtttattcacttgttattcttgctgacagaccattaaatactttttctcatattttgattgaaaattcgttttcatgtttcaactcatattggtt |
6007716 |
T |
|
| Q |
201 |
aaacagtatgcacatacatagaaatgtgtatattaattcctcctcaaataaaaaatatctatattaattcagtaattcatg |
281 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6007717 |
aaacagtatgc----acatagaaatgtgtatattaattcctcctcaaataaaaaatatctatattaattcagtaattcatg |
6007793 |
T |
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