View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18054_low_59 (Length: 275)
Name: NF18054_low_59
Description: NF18054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18054_low_59 |
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Alignment Details
Target: chr2 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 15 - 267
Target Start/End: Original strand, 1810333 - 1810586
Alignment:
| Q |
15 |
actttcctccttcgttacgacgatcaacttcgatccatcgcttcttctcccgattccagtcttcattttcctctccacatcgagtctgtattattcctct |
114 |
Q |
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| T |
1810333 |
actttcctcctttgctacgacgatcaacttcgatccatcgcttcttctcccgattccagtcttcattttcctctccacatcgagtctgtattattcctct |
1810432 |
T |
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| Q |
115 |
tcatcttctttattatcaaccctaaccctaattctaactcttttctatctatctatctatt-tttcagcttcgcggagttgatggattatgatcctcgca |
213 |
Q |
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||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
1810433 |
tcatcttctttattatcaatcctcaccctaattctaactcttttctatctatctatctattgtttcagcttcgcggagttgatggattatgatcctcgca |
1810532 |
T |
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| Q |
214 |
ttgctcgcctcatcttttctcaatccaatacatatctccaatattttgatgatg |
267 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1810533 |
ttgctcgcctcatcttttctcaatccaatacatatctccaatattttgatgatg |
1810586 |
T |
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