View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18054_low_81 (Length: 235)
Name: NF18054_low_81
Description: NF18054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18054_low_81 |
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Alignment Details
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 19 - 212
Target Start/End: Complemental strand, 1423115 - 1422922
Alignment:
| Q |
19 |
cacagataaacttaaacctaattagaaattttatacaaaaatgaagaatcgatgaacatgatagaaactggagaaatatgatagatagatagaataaaaa |
118 |
Q |
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| T |
1423115 |
cacagataaacttaaacctaattagaaattttatacaaaaatgaagaatcgatgaacatgatagaaactggagaaatatgatagatagatagaataaaaa |
1423016 |
T |
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| Q |
119 |
agaaagtataacagtggagaaaagcaaactcgagagaattatgggatgattttgtgatgttgaattggtcttcctatttctcacccaaaaaatt |
212 |
Q |
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| T |
1423015 |
agaaagtataacagtggagaaaaggaaactcgagagaattatgggatgattttgtgatgttgaattggtcttcctatttctcacccaaaaaatt |
1422922 |
T |
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