View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18056_high_19 (Length: 288)

Name: NF18056_high_19
Description: NF18056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18056_high_19
NF18056_high_19
[»] chr2 (41 HSPs)
chr2 (18-216)||(27466057-27466252)
chr2 (236-288)||(12024025-12024077)
chr2 (236-288)||(14530294-14530346)
chr2 (236-286)||(44604832-44604882)
chr2 (237-286)||(10543676-10543725)
chr2 (236-288)||(8455423-8455475)
chr2 (236-288)||(23397742-23397794)
chr2 (236-288)||(24200732-24200784)
chr2 (236-288)||(26684729-26684781)
chr2 (236-286)||(5450263-5450313)
chr2 (242-288)||(17667978-17668024)
chr2 (242-284)||(21779372-21779414)
chr2 (236-288)||(35017793-35017846)
chr2 (243-287)||(99377-99421)
chr2 (236-288)||(7214510-7214562)
chr2 (236-288)||(11514412-11514464)
chr2 (236-288)||(22371033-22371085)
chr2 (236-288)||(25249844-25249896)
chr2 (244-288)||(27573597-27573641)
chr2 (236-288)||(40416978-40417030)
chr2 (243-286)||(5841006-5841049)
chr2 (237-288)||(17705471-17705522)
chr2 (245-288)||(25079834-25079877)
chr2 (236-279)||(25641487-25641530)
chr2 (243-288)||(17623540-17623585)
chr2 (243-288)||(17896235-17896280)
chr2 (252-288)||(14544039-14544075)
chr2 (236-284)||(17380343-17380391)
chr2 (236-284)||(19977821-19977869)
chr2 (236-288)||(23145805-23145857)
chr2 (236-288)||(23557595-23557647)
chr2 (236-288)||(29419996-29420048)
chr2 (244-288)||(33795261-33795305)
chr2 (236-288)||(39914413-39914465)
chr2 (245-288)||(21377189-21377232)
chr2 (246-288)||(4516468-4516510)
chr2 (235-273)||(10546153-10546191)
chr2 (236-286)||(31158548-31158598)
chr2 (236-288)||(9671156-9671209)
chr2 (243-275)||(19614981-19615013)
chr2 (243-287)||(45235932-45235976)
[»] chr1 (54 HSPs)
chr1 (236-286)||(45812642-45812692)
chr1 (236-288)||(6983916-6983968)
chr1 (236-288)||(18724652-18724704)
chr1 (236-288)||(18944642-18944694)
chr1 (236-288)||(20036219-20036271)
chr1 (236-288)||(27474280-27474332)
chr1 (236-288)||(34725203-34725255)
chr1 (236-288)||(41319913-41319965)
chr1 (236-288)||(47214510-47214562)
chr1 (236-288)||(2435894-2435946)
chr1 (236-288)||(2436000-2436052)
chr1 (236-288)||(14617037-14617089)
chr1 (236-288)||(20004199-20004251)
chr1 (236-288)||(22930174-22930226)
chr1 (236-288)||(23768427-23768479)
chr1 (236-288)||(27201646-27201698)
chr1 (236-288)||(32632663-32632715)
chr1 (236-288)||(46991803-46991855)
chr1 (236-288)||(50760333-50760385)
chr1 (248-288)||(52910216-52910256)
chr1 (242-288)||(6925099-6925145)
chr1 (242-284)||(8197046-8197088)
chr1 (242-288)||(35117881-35117927)
chr1 (236-285)||(9939463-9939512)
chr1 (243-288)||(19414438-19414483)
chr1 (236-285)||(22327101-22327150)
chr1 (243-288)||(40424741-40424786)
chr1 (236-288)||(4430133-4430185)
chr1 (236-288)||(25290162-25290214)
chr1 (236-288)||(30395835-30395887)
chr1 (236-288)||(34714622-34714674)
chr1 (236-288)||(35019229-35019281)
chr1 (243-287)||(38478394-38478438)
chr1 (236-288)||(46248060-46248112)
chr1 (236-287)||(25468370-25468421)
chr1 (242-288)||(10378838-10378884)
chr1 (246-288)||(19932869-19932911)
chr1 (236-277)||(31272481-31272522)
chr1 (236-288)||(14988026-14988078)
chr1 (238-286)||(18335955-18336003)
chr1 (248-288)||(18742080-18742120)
chr1 (256-288)||(33222983-33223015)
chr1 (236-288)||(49546014-49546066)
chr1 (236-287)||(19701570-19701621)
chr1 (236-287)||(44485216-44485267)
chr1 (236-286)||(18335395-18335445)
chr1 (246-288)||(21006143-21006185)
chr1 (236-286)||(22151505-22151555)
chr1 (236-273)||(10668239-10668276)
chr1 (243-288)||(11596512-11596557)
chr1 (243-288)||(17470460-17470505)
chr1 (236-277)||(43768168-43768209)
chr1 (236-288)||(45402094-45402145)
chr1 (256-288)||(50811938-50811970)
[»] chr7 (48 HSPs)
chr7 (236-288)||(11617695-11617747)
chr7 (236-288)||(32758237-32758289)
chr7 (236-288)||(47077960-47078012)
chr7 (236-287)||(10693178-10693229)
chr7 (236-285)||(11741774-11741823)
chr7 (243-288)||(28362259-28362304)
chr7 (243-288)||(48735235-48735280)
chr7 (243-287)||(7193062-7193106)
chr7 (236-288)||(19426996-19427048)
chr7 (236-288)||(21172114-21172166)
chr7 (236-288)||(33872016-33872068)
chr7 (236-288)||(42495942-42495994)
chr7 (236-288)||(42805500-42805552)
chr7 (236-288)||(43557448-43557500)
chr7 (236-287)||(6736867-6736918)
chr7 (234-288)||(3469284-3469338)
chr7 (242-288)||(13805078-13805124)
chr7 (238-288)||(19266426-19266476)
chr7 (236-282)||(42391205-42391251)
chr7 (236-288)||(2541126-2541179)
chr7 (236-288)||(7794613-7794665)
chr7 (236-288)||(14732929-14732981)
chr7 (236-288)||(23419781-23419833)
chr7 (236-288)||(27629610-27629662)
chr7 (236-288)||(34626314-34626366)
chr7 (236-288)||(35334921-35334973)
chr7 (236-288)||(42798645-42798697)
chr7 (236-288)||(46354170-46354222)
chr7 (245-288)||(19265791-19265834)
chr7 (245-288)||(40463853-40463896)
chr7 (242-288)||(14099119-14099165)
chr7 (242-288)||(14409136-14409182)
chr7 (242-288)||(22699083-22699129)
chr7 (243-284)||(28078245-28078286)
chr7 (243-288)||(39123866-39123911)
chr7 (236-285)||(47716438-47716487)
chr7 (248-288)||(5180276-5180316)
chr7 (236-288)||(7644932-7644984)
chr7 (236-288)||(12473280-12473332)
chr7 (244-288)||(18327010-18327054)
chr7 (236-288)||(29140467-29140519)
chr7 (243-288)||(29907393-29907440)
chr7 (236-288)||(42101992-42102044)
chr7 (236-288)||(42476849-42476901)
chr7 (236-288)||(48123591-48123643)
chr7 (237-288)||(8149054-8149105)
chr7 (236-288)||(1424017-1424069)
chr7 (236-288)||(44123728-44123780)
[»] chr6 (24 HSPs)
chr6 (236-288)||(9161099-9161151)
chr6 (236-288)||(1346940-1346992)
chr6 (236-288)||(1354862-1354914)
chr6 (237-288)||(13905087-13905138)
chr6 (236-288)||(3815184-3815236)
chr6 (236-288)||(12222024-12222076)
chr6 (236-288)||(12889402-12889454)
chr6 (236-287)||(2166519-2166570)
chr6 (236-287)||(2178152-2178203)
chr6 (242-288)||(14553488-14553533)
chr6 (246-288)||(20400643-20400685)
chr6 (235-288)||(2755530-2755583)
chr6 (236-281)||(29355964-29356009)
chr6 (246-287)||(32728273-32728314)
chr6 (243-288)||(33922942-33922987)
chr6 (236-288)||(14975187-14975239)
chr6 (237-288)||(8409219-8409270)
chr6 (243-288)||(24734609-24734654)
chr6 (236-272)||(17432332-17432368)
chr6 (243-286)||(12063445-12063488)
chr6 (236-278)||(23240929-23240971)
chr6 (245-286)||(32068074-32068115)
chr6 (256-288)||(8417448-8417480)
chr6 (236-288)||(15866144-15866196)
[»] chr5 (33 HSPs)
chr5 (236-288)||(27328728-27328780)
chr5 (236-288)||(37024661-37024713)
chr5 (236-288)||(38879557-38879609)
chr5 (236-288)||(43334178-43334230)
chr5 (236-288)||(1565407-1565459)
chr5 (236-288)||(8170089-8170141)
chr5 (236-288)||(23974756-23974808)
chr5 (236-288)||(24448866-24448918)
chr5 (236-288)||(35710289-35710341)
chr5 (236-288)||(41014295-41014347)
chr5 (242-288)||(209040-209086)
chr5 (242-288)||(4619219-4619265)
chr5 (236-287)||(22187262-22187313)
chr5 (243-286)||(22861780-22861823)
chr5 (245-288)||(39079882-39079925)
chr5 (245-288)||(39301099-39301142)
chr5 (236-286)||(30006303-30006353)
chr5 (235-288)||(28516540-28516593)
chr5 (238-287)||(31694217-31694266)
chr5 (236-277)||(32703411-32703452)
chr5 (244-280)||(1850624-1850660)
chr5 (236-288)||(22600430-22600482)
chr5 (236-281)||(1405170-1405215)
chr5 (236-281)||(9794466-9794511)
chr5 (243-284)||(10634260-10634301)
chr5 (257-286)||(28208235-28208264)
chr5 (243-288)||(31299608-31299653)
chr5 (243-284)||(34074676-34074717)
chr5 (256-284)||(12006457-12006485)
chr5 (236-288)||(17419890-17419942)
chr5 (236-288)||(19143049-19143101)
chr5 (248-288)||(31362454-31362494)
chr5 (236-272)||(42924941-42924977)
[»] chr4 (52 HSPs)
chr4 (236-288)||(11054253-11054305)
chr4 (236-288)||(47528635-47528687)
chr4 (236-288)||(21646940-21646992)
chr4 (236-288)||(44363239-44363291)
chr4 (236-288)||(48598930-48598982)
chr4 (236-285)||(49938697-49938746)
chr4 (236-288)||(487242-487294)
chr4 (236-288)||(5306770-5306822)
chr4 (236-288)||(5313101-5313153)
chr4 (236-288)||(5648235-5648287)
chr4 (236-288)||(6430732-6430784)
chr4 (236-288)||(10660380-10660432)
chr4 (236-288)||(10874525-10874577)
chr4 (236-288)||(16408710-16408762)
chr4 (236-284)||(17043501-17043549)
chr4 (236-288)||(20224960-20225012)
chr4 (236-288)||(30639356-30639408)
chr4 (236-288)||(37494827-37494879)
chr4 (244-288)||(47441645-47441689)
chr4 (245-288)||(23501769-23501812)
chr4 (242-288)||(13256510-13256556)
chr4 (236-286)||(32478892-32478942)
chr4 (246-288)||(54966997-54967039)
chr4 (239-276)||(7038041-7038078)
chr4 (243-288)||(14590813-14590858)
chr4 (243-288)||(16911538-16911583)
chr4 (243-288)||(17315412-17315457)
chr4 (236-288)||(19027824-19027876)
chr4 (236-288)||(40915805-40915857)
chr4 (236-288)||(42164255-42164307)
chr4 (244-288)||(43035224-43035268)
chr4 (236-283)||(39077901-39077948)
chr4 (236-286)||(9832418-9832468)
chr4 (246-288)||(25343163-25343205)
chr4 (236-278)||(25463108-25463150)
chr4 (236-281)||(7385583-7385628)
chr4 (236-281)||(41018900-41018945)
chr4 (243-288)||(54730225-54730270)
chr4 (246-286)||(23580325-23580365)
chr4 (242-286)||(30690296-30690340)
chr4 (236-288)||(35567146-35567198)
chr4 (245-285)||(49938554-49938594)
chr4 (245-287)||(3580952-3580994)
chr4 (242-284)||(54175043-54175085)
chr4 (243-288)||(12257707-12257752)
chr4 (236-285)||(30496427-30496476)
chr4 (247-288)||(39029179-39029220)
chr4 (243-288)||(50856350-50856395)
chr4 (256-288)||(20405069-20405101)
chr4 (236-288)||(30352698-30352750)
chr4 (243-279)||(32629382-32629418)
chr4 (236-288)||(54640446-54640498)
[»] chr3 (35 HSPs)
chr3 (236-288)||(26869705-26869757)
chr3 (236-288)||(8247796-8247848)
chr3 (236-288)||(10870058-10870110)
chr3 (243-287)||(39203515-39203559)
chr3 (238-288)||(4495773-4495823)
chr3 (236-285)||(5173827-5173876)
chr3 (236-285)||(13628899-13628948)
chr3 (236-288)||(7696992-7697044)
chr3 (236-288)||(13730711-13730763)
chr3 (236-288)||(26573125-26573177)
chr3 (236-288)||(29366829-29366881)
chr3 (236-288)||(46421144-46421196)
chr3 (236-288)||(52926317-52926369)
chr3 (236-288)||(53062036-53062088)
chr3 (236-287)||(9607202-9607253)
chr3 (236-287)||(34420751-34420802)
chr3 (236-288)||(1217088-1217140)
chr3 (236-288)||(12914142-12914194)
chr3 (236-288)||(22123022-22123074)
chr3 (236-284)||(30928254-30928302)
chr3 (236-288)||(40272919-40272971)
chr3 (236-288)||(45620936-45620988)
chr3 (236-278)||(516417-516459)
chr3 (237-287)||(25944468-25944518)
chr3 (243-288)||(16735439-16735484)
chr3 (236-288)||(22609764-22609816)
chr3 (236-283)||(7942993-7943040)
chr3 (236-279)||(12525414-12525457)
chr3 (253-288)||(25517297-25517332)
chr3 (237-288)||(33075926-33075977)
chr3 (248-288)||(33235528-33235569)
chr3 (236-288)||(6411928-6411980)
chr3 (244-288)||(28904941-28904985)
chr3 (236-288)||(35417914-35417966)
chr3 (236-288)||(53996673-53996725)
[»] scaffold1176 (1 HSPs)
scaffold1176 (236-288)||(1692-1744)
[»] scaffold0258 (1 HSPs)
scaffold0258 (236-288)||(13130-13182)
[»] scaffold0187 (4 HSPs)
scaffold0187 (236-288)||(10155-10207)
scaffold0187 (236-288)||(20483-20535)
scaffold0187 (245-284)||(8925-8964)
scaffold0187 (245-284)||(19253-19292)
[»] scaffold0168 (1 HSPs)
scaffold0168 (236-288)||(30555-30607)
[»] chr8 (33 HSPs)
chr8 (236-288)||(12670355-12670407)
chr8 (236-288)||(20284180-20284232)
chr8 (236-288)||(20869603-20869655)
chr8 (236-288)||(21070809-21070861)
chr8 (236-288)||(30454202-30454254)
chr8 (237-288)||(24245427-24245478)
chr8 (236-288)||(2626495-2626547)
chr8 (236-288)||(17823552-17823604)
chr8 (236-284)||(18164866-18164914)
chr8 (236-288)||(25250498-25250550)
chr8 (236-288)||(28407392-28407444)
chr8 (236-288)||(28817733-28817785)
chr8 (236-288)||(36720772-36720824)
chr8 (236-288)||(39461103-39461155)
chr8 (243-288)||(13160678-13160723)
chr8 (236-288)||(7136636-7136688)
chr8 (236-288)||(35261655-35261707)
chr8 (236-288)||(42083806-42083858)
chr8 (236-288)||(44781613-44781665)
chr8 (236-286)||(29521792-29521842)
chr8 (236-282)||(31457155-31457201)
chr8 (236-285)||(35105902-35105951)
chr8 (236-288)||(6760798-6760850)
chr8 (236-288)||(8897871-8897923)
chr8 (236-288)||(11001057-11001109)
chr8 (236-288)||(22598133-22598185)
chr8 (236-288)||(26954108-26954160)
chr8 (236-288)||(31454164-31454216)
chr8 (236-288)||(45071241-45071293)
chr8 (236-281)||(11748282-11748327)
chr8 (236-285)||(30962880-30962929)
chr8 (247-287)||(24365178-24365218)
chr8 (236-288)||(44530125-44530177)
[»] scaffold0116 (1 HSPs)
scaffold0116 (236-288)||(8867-8919)
[»] scaffold0254 (1 HSPs)
scaffold0254 (236-287)||(4134-4185)
[»] scaffold0024 (1 HSPs)
scaffold0024 (236-287)||(83852-83903)
[»] scaffold0005 (1 HSPs)
scaffold0005 (243-288)||(226520-226565)
[»] scaffold0311 (1 HSPs)
scaffold0311 (236-288)||(10786-10838)
[»] scaffold0049 (1 HSPs)
scaffold0049 (236-288)||(58953-59005)
[»] scaffold0057 (3 HSPs)
scaffold0057 (245-288)||(24883-24926)
scaffold0057 (242-287)||(46996-47041)
scaffold0057 (236-288)||(46807-46859)
[»] scaffold0194 (1 HSPs)
scaffold0194 (236-286)||(24642-24692)
[»] scaffold0036 (1 HSPs)
scaffold0036 (236-278)||(35125-35167)
[»] scaffold0223 (1 HSPs)
scaffold0223 (236-288)||(11108-11159)


Alignment Details
Target: chr2 (Bit Score: 157; Significance: 2e-83; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 27466057 - 27466252
Alignment:
Q  18 aaagtggggttcaaaagaaaggaatatgattccaagacttaaaatagatttttattttattaaaaagatgatatttgttcatacgaattggtaaaataca 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27466057 aaagtggggttcaaaagaaaggaatatgattccaagacttaaaatagatttttattttattaaaaagatgatatttgttcatacgaattggtaaaataga 27466156  T
Q  118 tcgtatacaaacatatattcaacattactaaaaatgaaataaaagaagaagatgaaagttcgaataaatttacaatgtttaaattaataatataaaaaa 216  Q
    || ||||||||||||||||||||||||||||||||||   | || || || ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27466157 tcatatacaaacatatattcaacattactaaaaatga---agaaaaaaaaaatgaaagttcgaataaatttacaatgtttaaattaataacataaaaaa 27466252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 12024025 - 12024077
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  12024025 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 12024077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 14530346 - 14530294
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  14530346 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 14530294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 286
Target Start/End: Complemental strand, 44604882 - 44604832
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 286  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  44604882 tgtttccaggacttgaacctgtgaccttccagtcacatgacaacaacttta 44604832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 10543725 - 10543676
Alignment:
Q  237 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 286  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  10543725 gtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 10543676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 8455423 - 8455475
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  8455423 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 8455475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 23397794 - 23397742
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  23397794 tgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacc 23397742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 24200732 - 24200784
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||||||||||||    
T  24200732 tgtttccaggacttgaacccgtgacttttcagtcacatgacaacaactttacc 24200784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 26684729 - 26684781
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||||| ||||| |||||||||| |||||||||||||||||||||    
T  26684729 tgttttcaggacttaaacctttgacctttcaatcacatgacaacaactttacc 26684781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 286
Target Start/End: Complemental strand, 5450313 - 5450263
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 286  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||||||||||    
T  5450313 tgtttccaggaattgaacccgtgacctttcagtcacatgacaacaacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 242 - 288
Target Start/End: Complemental strand, 17668024 - 17667978
Alignment:
Q  242 caggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  17668024 caggacttgaacccgtgaccttccagtcacatgacaacaactttacc 17667978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 242 - 284
Target Start/End: Original strand, 21779372 - 21779414
Alignment:
Q  242 caggacttgaacctgtgacctttcagtcacatgacaacaactt 284  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  21779372 caggacttgaacccgtgacctttcagtcacatgacaacaactt 21779414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 35017846 - 35017793
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttca-gtcacatgacaacaactttacc 288  Q
    |||||||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  35017846 tgttttcaggacttaaacccgtgacctttcaagtcacatgacaacaactttacc 35017793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 99377 - 99421
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    |||||||||||| |||||||||||||||| |||||||||||||||    
T  99377 aggacttgaacccgtgacctttcagtcacgtgacaacaactttac 99421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 7214562 - 7214510
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| || ||||||||||  ||||||||||||||||||||||||||||||||    
T  7214562 tgtttccaagacttgaacccatgacctttcagtcacatgacaacaactttacc 7214510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 11514464 - 11514412
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  11514464 tgtttccaggagttgaacccgtgaccttccagtcacatgacaacaactttacc 11514412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 22371085 - 22371033
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||  ||||||||||||||||||||||||    
T  22371085 tgtttccaggacttgaacccgtgacctcccagtcacatgacaacaactttacc 22371033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 25249844 - 25249896
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| || |||||||||| |||||||| ||||||||||||||||||||||||    
T  25249844 tgtttccatgacttgaacccgtgaccttacagtcacatgacaacaactttacc 25249896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 27573641 - 27573597
Alignment:
Q  244 ggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||  ||||||||||||||||||||||||||||||||    
T  27573641 ggacttgaaccaatgacctttcagtcacatgacaacaactttacc 27573597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 40416978 - 40417030
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| || |||||||||| |||||||| ||||||||||||||||||||||||    
T  40416978 tgtttccatgacttgaacccgtgaccttccagtcacatgacaacaactttacc 40417030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 286
Target Start/End: Complemental strand, 5841049 - 5841006
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaacttta 286  Q
    |||||||||||| |||||||| ||||||||||||||||||||||    
T  5841049 aggacttgaacccgtgaccttccagtcacatgacaacaacttta 5841006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 17705522 - 17705471
Alignment:
Q  237 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||| ||||||||||||| ||||||||  |||||||||||||||||||||||    
T  17705522 gtttccaggacttgaacccgtgaccttctagtcacatgacaacaactttacc 17705471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 25079834 - 25079877
Alignment:
Q  245 gacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||| |||||||| ||||||||||||||||||||||||    
T  25079834 gacttgaacccgtgaccttccagtcacatgacaacaactttacc 25079877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 25641530 - 25641487
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaac 279  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  25641530 tgtttccaggacttgaacccgtgacctttcagtcacatgacaac 25641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 17623585 - 17623540
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||| |||||||| ||||| ||||||||||||||||||    
T  17623585 aggacttgaacccgtgaccttccagtcgcatgacaacaactttacc 17623540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 17896280 - 17896235
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||| | |||||||||| ||||||||||||||||||||||    
T  17896280 aggacttgaatccgtgacctttcggtcacatgacaacaactttacc 17896235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 288
Target Start/End: Complemental strand, 14544075 - 14544039
Alignment:
Q  252 acctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||| ||||||||||||||||||||||||||||||    
T  14544075 acctgtaacctttcagtcacatgacaacaactttacc 14544039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 17380343 - 17380391
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactt 284  Q
    ||||| || |||||||||| |||||||||| ||||||||||||||||||    
T  17380343 tgtttccaagacttgaacccgtgacctttcggtcacatgacaacaactt 17380391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 19977821 - 19977869
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactt 284  Q
    ||||| ||| ||||||||| |||||||||| ||||||||||||||||||    
T  19977821 tgtttccagaacttgaacccgtgacctttcggtcacatgacaacaactt 19977869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 23145805 - 23145857
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||| |||||||||| ||||||||||||||||   ||||||||||||||    
T  23145805 tgttttcaagacttgaacccgtgacctttcagtcacgctacaacaactttacc 23145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 23557595 - 23557647
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||| |||||||||| ||||||||||||||||   ||||||||||||||    
T  23557595 tgttttcaagacttgaacccgtgacctttcagtcacgctacaacaactttacc 23557647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 29419996 - 29420048
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||  |||||||||||||||  ||||||||||||||||    
T  29419996 tgtttccaggacttgaactcgtgacctttcagtcatgtgacaacaactttacc 29420048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 33795305 - 33795261
Alignment:
Q  244 ggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||||    
T  33795305 ggacttgaacccgtgacctttcaatcacgtgacaacaactttacc 33795261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 39914413 - 39914465
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||| |||||| || |||||||| ||||||||||||||||||||||||    
T  39914413 tgtttccagtacttgatcccgtgaccttccagtcacatgacaacaactttacc 39914465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 21377189 - 21377232
Alignment:
Q  245 gacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||  || ||||||||||||||||||||||||||||||    
T  21377189 gacttgaactcgtaacctttcagtcacatgacaacaactttacc 21377232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 4516468 - 4516510
Alignment:
Q  246 acttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||  ||||||||||||||||| ||||||||||||||||    
T  4516468 acttgaatatgtgacctttcagtcacgtgacaacaactttacc 4516510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 10546191 - 10546153
Alignment:
Q  235 atgttttcaggacttgaacctgtgacctttcagtcacat 273  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  10546191 atgtttccaggacttgaacccgtgacctttcagtcacat 10546153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 286
Target Start/End: Original strand, 31158548 - 31158598
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 286  Q
    |||||| | ||||| ||||  ||||||||||||||||||||||||||||||    
T  31158548 tgttttgaagactttaacccttgacctttcagtcacatgacaacaacttta 31158598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 9671209 - 9671156
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttc-agtcacatgacaacaactttacc 288  Q
    ||||| ||||| ||||||| ||||| |||| |||||||||||||||||||||||    
T  9671209 tgtttccaggatttgaacccgtgacatttccagtcacatgacaacaactttacc 9671156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 19615013 - 19614981
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatga 275  Q
    |||||||||||| ||||||||||||||||||||    
T  19615013 aggacttgaacccgtgacctttcagtcacatga 19614981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 45235932 - 45235976
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    |||||||||||  |||| ||||||||||||||| |||||||||||    
T  45235932 aggacttgaactcgtgatctttcagtcacatgagaacaactttac 45235976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 236 - 286
Target Start/End: Original strand, 45812642 - 45812692
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45812642 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 45812692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 6983916 - 6983968
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  6983916 tgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaactttacc 6983968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 18724652 - 18724704
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  18724652 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 18724704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 18944694 - 18944642
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  18944694 tgtttccaggccttgaacctgtgacctttcagtcacatgacaacaactttacc 18944642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 20036271 - 20036219
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  20036271 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 20036219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 27474332 - 27474280
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  27474332 tgtttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 27474280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 34725203 - 34725255
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  34725203 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 34725255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 41319913 - 41319965
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  41319913 tgtttccaggacttaaacctgtgacctttcagtcacatgacaacaactttacc 41319965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 47214562 - 47214510
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  47214562 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 47214510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 2435894 - 2435946
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  2435894 tgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 2435946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 2436000 - 2436052
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  2436000 tgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 2436052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 14617089 - 14617037
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||||    
T  14617089 tgtttccaggacttgaactcgtgacctttcagtcacatgacaacaactttacc 14617037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 20004199 - 20004251
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  20004199 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 20004251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 22930174 - 22930226
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  22930174 tgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacc 22930226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 23768427 - 23768479
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| || ||||||||||||||||||| ||||||||||||||||||||||||    
T  23768427 tgtttccatgacttgaacctgtgaccttacagtcacatgacaacaactttacc 23768479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 27201698 - 27201646
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  27201698 tgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacc 27201646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 32632663 - 32632715
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| ||||||||||||||| |||||||||||||||||    
T  32632663 tgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttacc 32632715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 46991855 - 46991803
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  46991855 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 46991803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 50760333 - 50760385
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| ||||||||    
T  50760333 tgttttcaggacttgaacccgtgacctctcagtcacatgacaactactttacc 50760385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 52910256 - 52910216
Alignment:
Q  248 ttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  52910256 ttgaacctgtgacctttcagtcacatgacaacaactttacc 52910216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 242 - 288
Target Start/End: Complemental strand, 6925145 - 6925099
Alignment:
Q  242 caggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  6925145 caggacttgaacccgtgaccttccagtcacatgacaacaactttacc 6925099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 8197088 - 8197046
Alignment:
Q  242 caggacttgaacctgtgacctttcagtcacatgacaacaactt 284  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  8197088 caggacttgaacccgtgacctttcagtcacatgacaacaactt 8197046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 242 - 288
Target Start/End: Original strand, 35117881 - 35117927
Alignment:
Q  242 caggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  35117881 caggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 35117927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 285
Target Start/End: Complemental strand, 9939512 - 9939463
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttt 285  Q
    ||||| ||||||||||||  ||||||||||||||||||||||||||||||    
T  9939512 tgtttccaggacttgaactcgtgacctttcagtcacatgacaacaacttt 9939463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 19414483 - 19414438
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||    
T  19414483 aggacttgaacccgtgacctttcagtcatatgacaacaactttacc 19414438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 285
Target Start/End: Complemental strand, 22327150 - 22327101
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttt 285  Q
    ||||| ||||||||||||| | ||||||||||||||||||||||||||||    
T  22327150 tgtttccaggacttgaacccgcgacctttcagtcacatgacaacaacttt 22327101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 40424786 - 40424741
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||    
T  40424786 aggacttgaacccgtggcctttcagtcacatgacaacaactttacc 40424741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 4430133 - 4430185
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||| ||||| |||| |||||||| ||||||||||||||||||||||||    
T  4430133 tgttttcaagacttaaacccgtgaccttccagtcacatgacaacaactttacc 4430185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 25290214 - 25290162
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| || |||||||||  |||||||||||||||||||||||||||||||||    
T  25290214 tgtttccaagacttgaacacgtgacctttcagtcacatgacaacaactttacc 25290162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 30395835 - 30395887
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| ||||||||  |||||||||||||||||||||||    
T  30395835 tgtttccaggacttgaacccgtgaccttaaagtcacatgacaacaactttacc 30395887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 34714674 - 34714622
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| || |||||||||| ||||||||||| |||||||||||||||||||||    
T  34714674 tgtttccatgacttgaacccgtgacctttcaatcacatgacaacaactttacc 34714622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 35019281 - 35019229
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||| |||||||||||||||||  ||||||||||||||||    
T  35019281 tgtttacaggacttgaatctgtgacctttcagtcatgtgacaacaactttacc 35019229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 38478394 - 38478438
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    |||||||||||| |||||||||||||||||||||||||| |||||    
T  38478394 aggacttgaacccgtgacctttcagtcacatgacaacaagtttac 38478438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 46248060 - 46248112
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| || |||||||||| ||||| |||||||||||||||||||||||||||    
T  46248060 tgtttccaagacttgaacccgtgacatttcagtcacatgacaacaactttacc 46248112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 287
Target Start/End: Original strand, 25468370 - 25468421
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    ||||| |||||||||||||  |||||||||| ||||||||||||||||||||    
T  25468370 tgtttccaggacttgaacccatgacctttcaatcacatgacaacaactttac 25468421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 288
Target Start/End: Original strand, 10378838 - 10378884
Alignment:
Q  242 caggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||||||| || ||||||||||||| ||||||||||||||||    
T  10378838 caggacttgaacccgtaacctttcagtcacgtgacaacaactttacc 10378884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 19932869 - 19932911
Alignment:
Q  246 acttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||  ||||||||||||||||||||||||||||||||    
T  19932869 acttgaacccatgacctttcagtcacatgacaacaactttacc 19932911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 277
Target Start/End: Original strand, 31272481 - 31272522
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgaca 277  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  31272481 tgtttccaggacttgaacctgtgacctttcagtcacgtgaca 31272522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 14988026 - 14988078
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||||||||| |||||| ||  ||||| |||||||||||||||||    
T  14988026 tgttttcaggacttgaacttgtgactttctagtcatatgacaacaactttacc 14988078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 18335955 - 18336003
Alignment:
Q  238 ttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 286  Q
    ||||||| |||||||| ||||||||||||| |||||| |||||||||||    
T  18335955 ttttcagaacttgaacatgtgacctttcagacacatggcaacaacttta 18336003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 18742080 - 18742120
Alignment:
Q  248 ttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||  ||||||||||||||||||||||||||||||||    
T  18742080 ttgaacccttgacctttcagtcacatgacaacaactttacc 18742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 33223015 - 33222983
Alignment:
Q  256 gtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||||||||||||||||||||||||    
T  33223015 gtgacctttcagtcacatgacaacaactttacc 33222983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 49546014 - 49546066
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||| || |||||||||||| ||||||||| ||| ||||||||||||||||    
T  49546014 tgttttaagaacttgaacctgtaacctttcagccacgtgacaacaactttacc 49546066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 19701621 - 19701570
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    |||||||| ||||| |||| ||||| ||||||||||| ||||||||||||||    
T  19701621 tgttttcatgacttaaacccgtgacatttcagtcacacgacaacaactttac 19701570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 236 - 287
Target Start/End: Original strand, 44485216 - 44485267
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    ||||| |||||||  |||| ||||||||||| ||||||||||||||||||||    
T  44485216 tgtttccaggactataacccgtgacctttcaatcacatgacaacaactttac 44485267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 286
Target Start/End: Original strand, 18335395 - 18335445
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 286  Q
    ||||| |||||||| ||| ||||||||||||| |||||||||| |||||||    
T  18335395 tgtttccaggactttaacttgtgacctttcagacacatgacaaaaacttta 18335445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 21006185 - 21006143
Alignment:
Q  246 acttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||| ||||||||||||| ||||||||||| ||||||    
T  21006185 acttgaacctttgacctttcagtcgcatgacaacaattttacc 21006143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 286
Target Start/End: Complemental strand, 22151555 - 22151505
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 286  Q
    ||||| ||| |||||||||| ||||||| |||||| |||||||||||||||    
T  22151555 tgtttccagaacttgaacctatgaccttacagtcagatgacaacaacttta 22151505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 10668276 - 10668239
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacat 273  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  10668276 tgtttccaggacttgaacccgtgacctttcagtcacat 10668239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 11596557 - 11596512
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||| ||||| |||||||||||||||| | ||||||||    
T  11596557 aggacttgaacccgtgacatttcagtcacatgacagccactttacc 11596512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 288
Target Start/End: Original strand, 17470460 - 17470505
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||||||  ||||| ||||||||| ||||||||||||||||    
T  17470460 aggacttgaacccatgaccattcagtcacgtgacaacaactttacc 17470505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 277
Target Start/End: Complemental strand, 43768209 - 43768168
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgaca 277  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||    
T  43768209 tgtttccaggacttgaacccgtgacctttcagtgacatgaca 43768168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 45402145 - 45402094
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| || ||||| || |||||||||||||||||||||    
T  45402145 tgtttccaggacttgaacccgttaccttcca-tcacatgacaacaactttacc 45402094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 50811970 - 50811938
Alignment:
Q  256 gtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||||||| ||||||||||||||||    
T  50811970 gtgacctttcagtcacgtgacaacaactttacc 50811938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 5e-19; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 11617695 - 11617747
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11617695 tgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 11617747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 32758289 - 32758237
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32758289 tgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 32758237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 47077960 - 47078012
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  47077960 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 47078012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 236 - 287
Target Start/End: Original strand, 10693178 - 10693229
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  10693178 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttac 10693229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 285
Target Start/End: Complemental strand, 11741823 - 11741774
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttt 285  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  11741823 tgttttcaggacttgaacccatgacctttcagtcacatgacaacaacttt 11741774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 243 - 288
Target Start/End: Original strand, 28362259 - 28362304
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  28362259 aggacttgaacctgtgacctttcagccacatgacaacaactttacc 28362304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 243 - 288
Target Start/End: Original strand, 48735235 - 48735280
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  48735235 aggacttgaacccgtgacctttcagtcacatgacaacaactttacc 48735280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 7193106 - 7193062
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  7193106 aggacttgaacccgtgacctttcagtcacatgacaacaactttac 7193062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 19426996 - 19427048
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  19426996 tgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttacc 19427048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 21172114 - 21172166
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  21172114 tgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttacc 21172166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 33872016 - 33872068
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| | |||||||||||||||||||||||||||||||    
T  33872016 tgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttacc 33872068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 42495942 - 42495994
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| ||||||||||||||| |||||||||||||||||    
T  42495942 tgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttacc 42495994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 42805552 - 42805500
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  42805552 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 42805500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 43557500 - 43557448
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  43557500 tgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacc 43557448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 6736918 - 6736867
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    |||||| |||||||||||| |||||||||||||| |||||||||||||||||    
T  6736918 tgttttgaggacttgaacccgtgacctttcagtcgcatgacaacaactttac 6736867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 288
Target Start/End: Original strand, 3469284 - 3469338
Alignment:
Q  234 aatgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||  |||||||||  |||||||||||||||||||||||||||||||||||    
T  3469284 aatgtttctaggacttgagtctgtgacctttcagtcacatgacaacaactttacc 3469338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 242 - 288
Target Start/End: Complemental strand, 13805124 - 13805078
Alignment:
Q  242 caggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||    
T  13805124 caggacttgaacccgttacctttcagtcacatgacaacaactttacc 13805078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 19266476 - 19266426
Alignment:
Q  238 ttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||    
T  19266476 ttttcaggacttgaacccacgacctttcagtcacatgacaacaactttacc 19266426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 282
Target Start/End: Original strand, 42391205 - 42391251
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaac 282  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  42391205 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaac 42391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 2541126 - 2541179
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttc-agtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||||||||||    
T  2541126 tgtttccaggacttgaacccgtgacctttccagtcacatgacaacaactttacc 2541179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 7794613 - 7794665
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  7794613 tgtttccaggacttgaacccgtgaccttccagtcacataacaacaactttacc 7794665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 14732929 - 14732981
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||||  |||| |||||||||||||||||||||||||||    
T  14732929 tgtttccaggacttgaacccatgacttttcagtcacatgacaacaactttacc 14732981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 23419781 - 23419833
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||| ||||||||||||||||||| |||||||||||| ||||||||||    
T  23419781 tgtttccagaacttgaacctgtgaccttttagtcacatgacagcaactttacc 23419833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 27629662 - 27629610
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||| |||| |||||||||||||||||    
T  27629662 tgtttccaggacttgaacccgtgacctttcggtcaaatgacaacaactttacc 27629610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 34626314 - 34626366
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  34626314 tgtttccaggacttgaatctgtggcctttcaatcacatgacaacaactttacc 34626366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 35334921 - 35334973
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||  |||||||| ||||||||||||||||||||||||    
T  35334921 tgtttccaggacttgaactcgtgaccttccagtcacatgacaacaactttacc 35334973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 42798697 - 42798645
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| || |||||||||| |||||||| ||||||||||||||||||||||||    
T  42798697 tgtttccaagacttgaacccgtgaccttccagtcacatgacaacaactttacc 42798645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 46354222 - 46354170
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||| || |||||||||||||||||||||    
T  46354222 tgtttccaggacttgaacccgtgaccttccaatcacatgacaacaactttacc 46354170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 19265834 - 19265791
Alignment:
Q  245 gacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||| |||||||||||||||| ||||||||||||||||    
T  19265834 gacttgaacccgtgacctttcagtcacgtgacaacaactttacc 19265791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 40463896 - 40463853
Alignment:
Q  245 gacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||| |||||||| ||||||||||||||||||||||||    
T  40463896 gacttgaacccgtgaccttacagtcacatgacaacaactttacc 40463853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 288
Target Start/End: Original strand, 14099119 - 14099165
Alignment:
Q  242 caggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||| ||||  ||||||||||||||||||||||||||||||||    
T  14099119 caggacttcaacccatgacctttcagtcacatgacaacaactttacc 14099165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 288
Target Start/End: Original strand, 14409136 - 14409182
Alignment:
Q  242 caggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||| ||||  ||||||||||||||||||||||||||||||||    
T  14409136 caggacttcaacccatgacctttcagtcacatgacaacaactttacc 14409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 288
Target Start/End: Original strand, 22699083 - 22699129
Alignment:
Q  242 caggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||||  | ||||||||||||||||||||||||||||||    
T  22699083 caggacttgaacccataacctttcagtcacatgacaacaactttacc 22699129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 28078245 - 28078286
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactt 284  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  28078245 aggacttgaacccgtgaccttacagtcacatgacaacaactt 28078286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 39123911 - 39123866
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||| ||| | |||||||||||||||||||||||||||    
T  39123911 aggacttgaacccgtgtcgtttcagtcacatgacaacaactttacc 39123866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 285
Target Start/End: Complemental strand, 47716487 - 47716438
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttt 285  Q
    ||||| ||||||||||||| |||||||| |||||||||| ||||||||||    
T  47716487 tgtttccaggacttgaacccgtgaccttccagtcacatggcaacaacttt 47716438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 5180276 - 5180316
Alignment:
Q  248 ttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||  ||||||||||||||||||||||||||||||||    
T  5180276 ttgaacccttgacctttcagtcacatgacaacaactttacc 5180316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 7644984 - 7644932
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||| | ||||||| ||||||    
T  7644984 tgtttccaggacttgaacccgtgacctttcagtcacgttacaacaaatttacc 7644932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 12473332 - 12473280
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||||  |||||||||||  |||||||||||||||||||    
T  12473332 tgtttgcaggacttgaacccatgacctttcagatacatgacaacaactttacc 12473280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 18327054 - 18327010
Alignment:
Q  244 ggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||    
T  18327054 ggacttgaacccgtgaccttcaagtcacatgacaacaactttacc 18327010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 29140467 - 29140519
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||  |||||||  |||||||||||||| |||||||||||||||||||    
T  29140467 tgttttcaaaacttgaatgtgtgacctttcagttacatgacaacaactttacc 29140519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 29907440 - 29907393
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatg--acaacaactttacc 288  Q
    |||||||||||| |||||||||||||||||||  ||||||||||||||    
T  29907440 aggacttgaacccgtgacctttcagtcacatgatacaacaactttacc 29907393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 42101992 - 42102044
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||| | ||||||| ||||||| ||||||||||||||||    
T  42101992 tgtttccaggacttgaacttttgaccttccagtcacgtgacaacaactttacc 42102044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 42476901 - 42476849
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||| ||||||| | ||||||||| |||||||||||||||||||||||    
T  42476901 tgtttccagaacttgaatccgtgaccttttagtcacatgacaacaactttacc 42476849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 48123591 - 48123643
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||||  ||||||||||| ||||||| ||||||||||||    
T  48123591 tgtttccaggacttgaacccatgacctttcagacacatgataacaactttacc 48123643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 8149054 - 8149105
Alignment:
Q  237 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||||||||  ||||| || |||||||||||||||||| |||||    
T  8149054 gttttcaggacttgaactcgtgactttgcagtcacatgacaacaacattacc 8149105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 1424017 - 1424069
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||| ||||| | |||||||| ||||||||| ||||||||||||||    
T  1424017 tgtttccaggatttgaatccgtgaccttccagtcacataacaacaactttacc 1424069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 44123728 - 44123780
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||| ||||||||| || | ||||||||||||||||| ||||||||||    
T  44123728 tgtttccagtacttgaacccgtaatctttcagtcacatgacaccaactttacc 44123780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 9161151 - 9161099
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9161151 tgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 9161099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 1346992 - 1346940
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  1346992 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 1346940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 1354862 - 1354914
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  1354862 tgtttccaggacttgaaccagtgacctttcagtcacatgacaacaactttacc 1354914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 13905087 - 13905138
Alignment:
Q  237 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  13905087 gttttcaggacttgagcccgtgacctttcagtcacatgacaacaactttacc 13905138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 3815184 - 3815236
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||||||||||||    
T  3815184 tgtttccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 3815236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 12222024 - 12222076
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| || |||||||||| |||||||||||||||||||||||||||||||||    
T  12222024 tgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttacc 12222076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 12889454 - 12889402
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  12889454 tgttttcaagacttgaacctgtgacctttcactcacgtgacaacaactttacc 12889402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 287
Target Start/End: Original strand, 2166519 - 2166570
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||||||||||    
T  2166519 tgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 2166570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 287
Target Start/End: Original strand, 2178152 - 2178203
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||||||||||    
T  2178152 tgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 2178203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 242 - 288
Target Start/End: Complemental strand, 14553533 - 14553488
Alignment:
Q  242 caggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  14553533 caggacttgaacctgtgaccttt-agtcacatgacaacaactttacc 14553488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 20400685 - 20400643
Alignment:
Q  246 acttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  20400685 acttgaacctgtgacctttcagtcacatgacaacaactatacc 20400643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 288
Target Start/End: Original strand, 2755530 - 2755583
Alignment:
Q  235 atgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||| || |||||||||||  |||||||||||||||||||||||||||||||    
T  2755530 atgtttgcaagacttgaacctacgacctttcagtcacatgacaacaactttacc 2755583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 29355964 - 29356009
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaa 281  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  29355964 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 29356009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 287
Target Start/End: Original strand, 32728273 - 32728314
Alignment:
Q  246 acttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  32728273 acttgaatctgtgacctttcagtcacatgacaacaactttac 32728314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 288
Target Start/End: Original strand, 33922942 - 33922987
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  33922942 aggacttgaacctgtgacttttcagtcaaatgacaacaactttacc 33922987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 14975187 - 14975239
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||| | |||||||| ||||||||||||||||||||||||    
T  14975187 tgtttccaggacttgaatccgtgaccttccagtcacatgacaacaactttacc 14975239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 8409270 - 8409219
Alignment:
Q  237 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||| ||||||||||| | |||||||||||||||||| ||||||||||||||    
T  8409270 gtttccaggacttgaatccgtgacctttcagtcacattacaacaactttacc 8409219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 24734654 - 24734609
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||| |||||| | ||||||||||||||||||||||||||||||||    
T  24734654 aggatttgaacttttgacctttcagtcacatgacaacaactttacc 24734609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 17432368 - 17432332
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcaca 272  Q
    ||||| |||||||||||||||||||||||||||||||    
T  17432368 tgtttccaggacttgaacctgtgacctttcagtcaca 17432332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 243 - 286
Target Start/End: Complemental strand, 12063488 - 12063445
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaacttta 286  Q
    |||||||||||| |||||||||||||| ||||| ||||||||||    
T  12063488 aggacttgaacccgtgacctttcagtctcatgataacaacttta 12063445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 23240929 - 23240971
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaa 278  Q
    ||||| ||||||||| |||||||||||||||||||| ||||||    
T  23240929 tgtttccaggacttgcacctgtgacctttcagtcacgtgacaa 23240971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 286
Target Start/End: Complemental strand, 32068115 - 32068074
Alignment:
Q  245 gacttgaacctgtgacctttcagtcacatgacaacaacttta 286  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||    
T  32068115 gacttgaacatgtgacctttcggtcacgtgacaacaacttta 32068074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 8417480 - 8417448
Alignment:
Q  256 gtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||||||||||||||||||    
T  8417480 gtgacatttcagtcacatgacaacaactttacc 8417448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 15866144 - 15866196
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||| |||||||  |||||||||| ||||||| |||||||||||||    
T  15866144 tgtttccaggaattgaacccatgacctttcaatcacatgccaacaactttacc 15866196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 27328780 - 27328728
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27328780 tgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 27328728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 37024661 - 37024713
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  37024661 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 37024713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 38879609 - 38879557
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  38879609 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 38879557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 43334230 - 43334178
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  43334230 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 43334178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 1565459 - 1565407
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| | |||||||||||||||||||||||||||||||    
T  1565459 tgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttacc 1565407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 8170089 - 8170141
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  8170089 tgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttacc 8170141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 23974808 - 23974756
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  23974808 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 23974756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 24448918 - 24448866
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  24448918 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 24448866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 35710341 - 35710289
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  35710341 tgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttacc 35710289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 41014347 - 41014295
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  41014347 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 41014295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 242 - 288
Target Start/End: Original strand, 209040 - 209086
Alignment:
Q  242 caggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||    
T  209040 caggacttgaacttgtgaccttttagtcacatgacaacaactttacc 209086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 242 - 288
Target Start/End: Original strand, 4619219 - 4619265
Alignment:
Q  242 caggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  4619219 caggacttgaacccgtgaccttccagtcacatgacaacaactttacc 4619265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 22187313 - 22187262
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    ||||| |||||||| |||| ||||||||||||||| ||||||||||||||||    
T  22187313 tgtttccaggacttaaaccggtgacctttcagtcaaatgacaacaactttac 22187262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 22861780 - 22861823
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaacttta 286  Q
    |||||||||| | |||||||||||||||||||||||||||||||    
T  22861780 aggacttgaatccgtgacctttcagtcacatgacaacaacttta 22861823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 39079882 - 39079925
Alignment:
Q  245 gacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||| |||||||||| ||||||||||||||||||||||    
T  39079882 gacttgaacccgtgacctttctgtcacatgacaacaactttacc 39079925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 39301142 - 39301099
Alignment:
Q  245 gacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||| ||||||||||||| |||||||||||||||||||    
T  39301142 gacttgaacccgtgacctttcagtaacatgacaacaactttacc 39301099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 286
Target Start/End: Complemental strand, 30006353 - 30006303
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 286  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||| ||||    
T  30006353 tgttttccggacttgaatctatgacctttcagtcacatgacaacaaattta 30006303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 288
Target Start/End: Original strand, 28516540 - 28516593
Alignment:
Q  235 atgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||| || |||||||||| |||||||||||| ||| ||||||||||||||||    
T  28516540 atgtttccaagacttgaacccgtgacctttcagccacctgacaacaactttacc 28516593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 287
Target Start/End: Original strand, 31694217 - 31694266
Alignment:
Q  238 ttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    |||||| ||||||||||| |||||| |||||||| |||||||||||||||    
T  31694217 ttttcaagacttgaacctatgacctatcagtcacgtgacaacaactttac 31694266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 277
Target Start/End: Complemental strand, 32703452 - 32703411
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgaca 277  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  32703452 tgtttccaggacttgaacccgtgacctttcagtcacatgaca 32703411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 1850660 - 1850624
Alignment:
Q  244 ggacttgaacctgtgacctttcagtcacatgacaaca 280  Q
    ||||||||||| |||||||||||||||||||||||||    
T  1850660 ggacttgaacccgtgacctttcagtcacatgacaaca 1850624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 22600482 - 22600430
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| || ||||| ||||||||||| ||||||||||||    
T  22600482 tgtttccaggacttgaacccgtaaccttccagtcacatgataacaactttacc 22600430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Complemental strand, 1405215 - 1405170
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaa 281  Q
    ||||| ||||||||||||| ||||||||  ||||||||||||||||    
T  1405215 tgtttccaggacttgaacccgtgaccttctagtcacatgacaacaa 1405170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 9794466 - 9794511
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaa 281  Q
    ||||||||||||||||||| |||||||||   ||||||||||||||    
T  9794466 tgttttcaggacttgaacccgtgaccttttgatcacatgacaacaa 9794511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 10634260 - 10634301
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactt 284  Q
    ||||||||||||  ||||||||||||||| ||||||||||||    
T  10634260 aggacttgaacccatgacctttcagtcacttgacaacaactt 10634301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 286
Target Start/End: Original strand, 28208235 - 28208264
Alignment:
Q  257 tgacctttcagtcacatgacaacaacttta 286  Q
    ||||||||||||||||||||||||||||||    
T  28208235 tgacctttcagtcacatgacaacaacttta 28208264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 31299653 - 31299608
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||  ||||||| | |||||||||||||||||||||||    
T  31299653 aggacttgaactagtgacctgtaagtcacatgacaacaactttacc 31299608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 34074676 - 34074717
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactt 284  Q
    ||||||||||| ||||||||||||||||  ||||||||||||    
T  34074676 aggacttgaacttgtgacctttcagtcatgtgacaacaactt 34074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 284
Target Start/End: Original strand, 12006457 - 12006485
Alignment:
Q  256 gtgacctttcagtcacatgacaacaactt 284  Q
    |||||||||||||||||||||||||||||    
T  12006457 gtgacctttcagtcacatgacaacaactt 12006485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 17419942 - 17419890
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||  || ||||||||||||||| ||||||| ||||||    
T  17419942 tgtttccaggacttgaactcgtaacctttcagtcacattacaacaattttacc 17419890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 19143049 - 19143101
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||||||| | ||| |||||| ||||||||| ||||||    
T  19143049 tgtttccaggacttgaacctgtggcattttagtcacgtgacaacaattttacc 19143101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 31362454 - 31362494
Alignment:
Q  248 ttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||| |||||||| || |||||||||||||||||||||    
T  31362454 ttgaacccgtgaccttccaatcacatgacaacaactttacc 31362494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 42924941 - 42924977
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcaca 272  Q
    ||||||||||||||||||  |||||||||||||||||    
T  42924941 tgttttcaggacttgaactcgtgacctttcagtcaca 42924977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 11054253 - 11054305
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11054253 tgttttcaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 11054305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 47528635 - 47528687
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  47528635 tgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 47528687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 21646992 - 21646940
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  21646992 tgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttacc 21646940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 44363239 - 44363291
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  44363239 tgttttcaggacttgaactcgtgacctttcagtcacatgacaacaactttacc 44363291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 48598930 - 48598982
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  48598930 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 48598982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 285
Target Start/End: Original strand, 49938697 - 49938746
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttt 285  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  49938697 tgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaacttt 49938746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 487242 - 487294
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| || |||||||||| |||||||||||||||||||||||||||||||||    
T  487242 tgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttacc 487294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 5306770 - 5306822
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||| ||||||||||    
T  5306770 tgtttccaggacttgaacccgtgacctttcagtcacatgacatcaactttacc 5306822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 5313101 - 5313153
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  5313101 tgttttcaggaattgaacccgtgacctttcaatcacatgacaacaactttacc 5313153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 5648287 - 5648235
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  5648287 tgtttccaggacttgaacccgtgaccttacagtcacatgacaacaactttacc 5648235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 6430732 - 6430784
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| || |||||||||| |||||||||||||||||||||||||||||||||    
T  6430732 tgtttccatgacttgaacccgtgacctttcagtcacatgacaacaactttacc 6430784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 10660432 - 10660380
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||||||    
T  10660432 tgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttacc 10660380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 10874577 - 10874525
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||||||    
T  10874577 tgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttacc 10874525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 16408710 - 16408762
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  16408710 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 16408762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 17043501 - 17043549
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactt 284  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  17043501 tgtttccaggacttgaacctgtgacctttcagtcacttgacaacaactt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 20225012 - 20224960
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  20225012 tgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacc 20224960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 30639408 - 30639356
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||||||||||    
T  30639408 tgtttccaggacttgaaccagtgacctttcagtcacaagacaacaactttacc 30639356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 37494879 - 37494827
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||||||||||||||||||| |||| |||||||||||||    
T  37494879 tgtttccaggacttgaacctgtgacctttcagtcgcatggcaacaactttacc 37494827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 47441645 - 47441689
Alignment:
Q  244 ggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  47441645 ggacttgaacctgtgacctttcagtcacgtgacaacaactttacc 47441689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 23501812 - 23501769
Alignment:
Q  245 gacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  23501812 gacttgaacccgtgacctttcagtcacatgacaacaactttacc 23501769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 242 - 288
Target Start/End: Original strand, 13256510 - 13256556
Alignment:
Q  242 caggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  13256510 caggacttgaacctatgaccttccagtcacatgacaacaactttacc 13256556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 286
Target Start/End: Original strand, 32478892 - 32478942
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 286  Q
    ||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  32478892 tgtttccaggacttgaacctgtgacctctcggtcacatgacaacaacttta 32478942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 54967039 - 54966997
Alignment:
Q  246 acttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  54967039 acttgaacatgtgacctttcagtcacatgacaacaactttacc 54966997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 276
Target Start/End: Complemental strand, 7038078 - 7038041
Alignment:
Q  239 tttcaggacttgaacctgtgacctttcagtcacatgac 276  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7038078 tttcaggacttgaacctgtgacctttcagtcacatgac 7038041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 14590858 - 14590813
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||| | |||||||||||||||||||||||||||||||||    
T  14590858 aggacttgaatccgtgacctttcagtcacatgacaacaactttacc 14590813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 16911583 - 16911538
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||    
T  16911583 aggacttgaacccgtgacctttaagtcacatgacaacaactttacc 16911538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 288
Target Start/End: Original strand, 17315412 - 17315457
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||    
T  17315412 aggaattgaacccgtgacctttcagtcacatgacaacaactttacc 17315457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 19027876 - 19027824
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||||||| ||||    
T  19027876 tgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactctacc 19027824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 40915857 - 40915805
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| ||||||||  |||||||||||||||||||||||    
T  40915857 tgtttccaggacttgaacccgtgaccttatagtcacatgacaacaactttacc 40915805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 42164255 - 42164307
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| || |||||||||| |||||||||||||||||||||||||| ||||||    
T  42164255 tgtttccaagacttgaacccgtgacctttcagtcacatgacaacaattttacc 42164307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 43035268 - 43035224
Alignment:
Q  244 ggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||    
T  43035268 ggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 43035224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 283
Target Start/End: Original strand, 39077901 - 39077948
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaact 283  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||||||    
T  39077901 tgtttccaggacttgaacccgtgacctttcaatcacatgacaacaact 39077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 286
Target Start/End: Original strand, 9832418 - 9832468
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 286  Q
    ||||||||||||||||||| ||||||||||||||| || ||||||| ||||    
T  9832418 tgttttcaggacttgaacccgtgacctttcagtcagatcacaacaatttta 9832468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 25343205 - 25343163
Alignment:
Q  246 acttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||||||||||| |||||||| ||||||||||||||||    
T  25343205 acttgaacctgtgacctatcagtcacgtgacaacaactttacc 25343163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 25463150 - 25463108
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaa 278  Q
    ||||| ||||||||||||| |||||||||||||||||||||||    
T  25463150 tgtttccaggacttgaacccgtgacctttcagtcacatgacaa 25463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 7385583 - 7385628
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaa 281  Q
    ||||| |||| |||||||| ||||||||||||||||||||||||||    
T  7385583 tgtttccagggcttgaacccgtgacctttcagtcacatgacaacaa 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 41018900 - 41018945
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaa 281  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||||    
T  41018900 tgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaa 41018945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 54730270 - 54730225
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||| |||||||||  ||||||||||||||||||||||    
T  54730270 aggacttgaacccgtgaccttttggtcacatgacaacaactttacc 54730225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 23580325 - 23580365
Alignment:
Q  246 acttgaacctgtgacctttcagtcacatgacaacaacttta 286  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  23580325 acttgaacccgtgacctttcagtcacgtgacaacaacttta 23580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 30690296 - 30690340
Alignment:
Q  242 caggacttgaacctgtgacctttcagtcacatgacaacaacttta 286  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||||    
T  30690296 caggacttgaacccgtgacctttcagtcacttgacaaccacttta 30690340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 35567198 - 35567146
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| || ||||||||||  |||||||||||| |||||||||||||||||||    
T  35567198 tgtttccaagacttgaacccatgacctttcagttacatgacaacaactttacc 35567146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 285
Target Start/End: Original strand, 49938554 - 49938594
Alignment:
Q  245 gacttgaacctgtgacctttcagtcacatgacaacaacttt 285  Q
    |||||||| |||||||||||||||||| |||||||||||||    
T  49938554 gacttgaatctgtgacctttcagtcacgtgacaacaacttt 49938594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 3580952 - 3580994
Alignment:
Q  245 gacttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    |||||||||  ||||| ||||||||||||||||||||||||||    
T  3580952 gacttgaactcgtgacttttcagtcacatgacaacaactttac 3580994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 54175085 - 54175043
Alignment:
Q  242 caggacttgaacctgtgacctttcagtcacatgacaacaactt 284  Q
    ||||||||||| | ||||| |||||||||||||||||||||||    
T  54175085 caggacttgaatccgtgacatttcagtcacatgacaacaactt 54175043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 288
Target Start/End: Original strand, 12257707 - 12257752
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||| ||||||| ||||||||||| |||| ||||||||||||||||    
T  12257707 aggatttgaacccgtgacctttcaatcacgtgacaacaactttacc 12257752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 285
Target Start/End: Original strand, 30496427 - 30496476
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttt 285  Q
    ||||| || |||||||||  |||||||||||||||| |||||||||||||    
T  30496427 tgtttccatgacttgaacacgtgacctttcagtcacgtgacaacaacttt 30496476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 288
Target Start/End: Original strand, 39029179 - 39029220
Alignment:
Q  247 cttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||| |||||||| ||||||| |||||||||||||||    
T  39029179 cttgaacctatgaccttttagtcacacgacaacaactttacc 39029220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 288
Target Start/End: Original strand, 50856350 - 50856395
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||| ||||||||||| |||  ||||||||||||||||    
T  50856350 aggacttgaacccgtgacctttcaatcatgtgacaacaactttacc 50856395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 20405101 - 20405069
Alignment:
Q  256 gtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||| ||||||||||||||||||||||||    
T  20405101 gtgaccttccagtcacatgacaacaactttacc 20405069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 30352698 - 30352750
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||  |||| |||||||||| ||||| ||||||||||||||||    
T  30352698 tgtttccaggactctaacccgtgacctttcggtcacttgacaacaactttacc 30352750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 32629382 - 32629418
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaac 279  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  32629382 aggatttgaacccgtgacctttcagtcacatgacaac 32629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 54640446 - 54640498
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| || |||||||||| |||||||||||| ||| ||||||||| ||||||    
T  54640446 tgtttccaagacttgaacccgtgacctttcagccacgtgacaacaattttacc 54640498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 5e-19; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 26869757 - 26869705
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26869757 tgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 26869705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 8247796 - 8247848
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  8247796 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 8247848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 10870058 - 10870110
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  10870058 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 10870110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 39203559 - 39203515
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  39203559 aggacttgaacctgtgacctttcagtcacatgacaacaactttac 39203515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 4495773 - 4495823
Alignment:
Q  238 ttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  4495773 ttttcaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 4495823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 285
Target Start/End: Original strand, 5173827 - 5173876
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttt 285  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  5173827 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttt 5173876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 285
Target Start/End: Original strand, 13628899 - 13628948
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttt 285  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  13628899 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttt 13628948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 7696992 - 7697044
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  7696992 tgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttacc 7697044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 13730711 - 13730763
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  13730711 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 13730763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 26573177 - 26573125
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  26573177 tgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 26573125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 29366829 - 29366881
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  29366829 tgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttacc 29366881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 46421144 - 46421196
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  46421144 tgtttccaggacttgaacccgtgacctttaagtcacatgacaacaactttacc 46421196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 52926317 - 52926369
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  52926317 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 52926369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 53062088 - 53062036
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||||    
T  53062088 tgtttccaggacttgaacacgtgacctttcagtcacatgacaacaactttacc 53062036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 9607253 - 9607202
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||||||||    
T  9607253 tgtttccaggacttgaaccgatgacctttcagtcacatgacaacaactttac 9607202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 287
Target Start/End: Original strand, 34420751 - 34420802
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||||||||||    
T  34420751 tgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttac 34420802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 1217140 - 1217088
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| ||||||||||||| ||||||| |||||||||||    
T  1217140 tgtttccaggacttgaacccgtgacctttcagtgacatgactacaactttacc 1217088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 12914142 - 12914194
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  12914142 tgtttccaggacttgaacttgtgacctttcggtcacattacaacaactttacc 12914194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 22123022 - 22123074
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| | |||||||||||||||||||||||| ||||||    
T  22123022 tgtttccaggacttgaacccgcgacctttcagtcacatgacaacaaatttacc 22123074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 30928254 - 30928302
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactt 284  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| |||||    
T  30928254 tgtttccaggacttgaacccgtgacctttcagtcacatgacaagaactt 30928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 40272919 - 40272971
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||||  ||||||| ||||||||||||||||||||||||    
T  40272919 tgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttacc 40272971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 45620936 - 45620988
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  45620936 tgtttccagaacttgaacccgtgacctttcagtcacgtgacaacaactttacc 45620988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 516459 - 516417
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaa 278  Q
    ||||| ||||||||||||| |||||||||||||||||||||||    
T  516459 tgtttccaggacttgaacccgtgacctttcagtcacatgacaa 516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 287
Target Start/End: Complemental strand, 25944518 - 25944468
Alignment:
Q  237 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    |||| |||||||||||||  ||||||||||||||| |||||||||||||||    
T  25944518 gtttccaggacttgaacccatgacctttcagtcacgtgacaacaactttac 25944468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 16735484 - 16735439
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||    
T  16735484 aggacttgaacccgtgacgttacagtcacatgacaacaactttacc 16735439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 22609816 - 22609764
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| || |||||||||| || ||||| ||||||||||||||||||||||||    
T  22609816 tgtttccaagacttgaacccgttaccttacagtcacatgacaacaactttacc 22609764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 236 - 283
Target Start/End: Complemental strand, 7943040 - 7942993
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaact 283  Q
    ||||| ||||||||||| | |||||||| |||||||||||||||||||    
T  7943040 tgtttccaggacttgaatccgtgaccttccagtcacatgacaacaact 7942993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 12525457 - 12525414
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaac 279  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||    
T  12525457 tgtttccaggactcgaacctgtgacctttcagtcatatgacaac 12525414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 253 - 288
Target Start/End: Original strand, 25517297 - 25517332
Alignment:
Q  253 cctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25517297 cctgtgaccttccagtcacatgacaacaactttacc 25517332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 33075926 - 33075977
Alignment:
Q  237 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||| |||||| |||||||| ||| |||||||||||||| ||||||    
T  33075926 gttttcaggatttgaacatgtgacctctcaatcacatgacaacaattttacc 33075977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 33235569 - 33235528
Alignment:
Q  248 ttgaacctgtgacctttca-gtcacatgacaacaactttacc 288  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  33235569 ttgaacttgtgacctttcatgtcacatgacaacaactttacc 33235528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 6411928 - 6411980
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| || ||||||||||  |||||| ||||| |||||||||||||||||||    
T  6411928 tgtttacaagacttgaacccatgacctatcagttacatgacaacaactttacc 6411980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 28904985 - 28904941
Alignment:
Q  244 ggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||| ||| |||||| ||| |||||||||||||||||||||||    
T  28904985 ggacttaaacatgtgactttttagtcacatgacaacaactttacc 28904941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 35417966 - 35417914
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||| ||||||  ||||||| |||||||||||| ||||||||||||    
T  35417966 tgtttccaggatttgaactcgtgacctctcagtcacatgataacaactttacc 35417914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 53996673 - 53996725
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| || |||||||||  ||||||||||||||| |||||||||| ||||||    
T  53996673 tgtttccacgacttgaacacgtgacctttcagtcaaatgacaacaaatttacc 53996725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 1692 - 1744
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  1692 tgttttcaggacttgaacccatgacctttcagtcacatgacaacaactttacc 1744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 13130 - 13182
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  13130 tgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttacc 13182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 45; Significance: 1e-16; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 10155 - 10207
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  10155 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 10207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 20483 - 20535
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  20483 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 20535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 284
Target Start/End: Complemental strand, 8964 - 8925
Alignment:
Q  245 gacttgaacctgtgacctttcagtcacatgacaacaactt 284  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  8964 gacttgaacctgtgacatttcagtcacatgacaacaactt 8925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 284
Target Start/End: Complemental strand, 19292 - 19253
Alignment:
Q  245 gacttgaacctgtgacctttcagtcacatgacaacaactt 284  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  19292 gacttgaacctgtgacatttcagtcacatgacaacaactt 19253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 30607 - 30555
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  30607 tgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttacc 30555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 12670355 - 12670407
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  12670355 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 12670407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 20284180 - 20284232
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  20284180 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 20284232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 20869603 - 20869655
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  20869603 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 20869655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 21070809 - 21070861
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  21070809 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 21070861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 30454202 - 30454254
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  30454202 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 30454254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 24245478 - 24245427
Alignment:
Q  237 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  24245478 gtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 24245427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 2626547 - 2626495
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  2626547 tgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttacc 2626495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 17823604 - 17823552
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  17823604 tgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttacc 17823552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 18164866 - 18164914
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactt 284  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  18164866 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactt 18164914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 25250550 - 25250498
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  25250550 tgtttccaggacttgaacatgtgaccttccagtcacatgacaacaactttacc 25250498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 28407444 - 28407392
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  28407444 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 28407392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 28817733 - 28817785
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  28817733 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 28817785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 36720824 - 36720772
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  36720824 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 36720772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 39461103 - 39461155
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  39461103 tgtttccaggacttgaacccgtgacctttcagtctcatgacaacaactttacc 39461155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 13160723 - 13160678
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||    
T  13160723 aggacttgaacccgtgaccttacagtcacatgacaacaactttacc 13160678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 7136636 - 7136688
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||||||||  ||||||| ||||||||||||||||||||||||    
T  7136636 tgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttacc 7136688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 35261707 - 35261655
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||| |||||||| |||||||| ||||||||||||||||||||||||    
T  35261707 tgtttccagggcttgaacccgtgaccttccagtcacatgacaacaactttacc 35261655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 42083806 - 42083858
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||||| ||||||    
T  42083806 tgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaattttacc 42083858  T

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Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 44781613 - 44781665
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||| ||||||||||| ||||||||||||||||    
T  44781613 tgtttccaggacttgaacccgtgaactttcagtcacgtgacaacaactttacc 44781665  T

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Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 286
Target Start/End: Original strand, 29521792 - 29521842
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 286  Q
    ||||| ||||||||||||| |||||||| |||||||| |||||||||||||    
T  29521792 tgtttccaggacttgaacccgtgaccttccagtcacacgacaacaacttta 29521842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 282
Target Start/End: Complemental strand, 31457201 - 31457155
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaac 282  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  31457201 tgtttacaggacttgaacccgtgacctttcagccacatgacaacaac 31457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 285
Target Start/End: Complemental strand, 35105951 - 35105902
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttt 285  Q
    ||||| ||||||||||||| |||||||||||| ||| |||||||||||||    
T  35105951 tgtttccaggacttgaacccgtgacctttcagccacgtgacaacaacttt 35105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 6760850 - 6760798
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| ||||||||  ||||| |||||||||||||||||    
T  6760850 tgtttccaggacttgaacccgtgaccttctagtcatatgacaacaactttacc 6760798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 8897871 - 8897923
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| |||||||| |||| |||||||| | ||||||||||||||||||||||    
T  8897871 tgtttccaggacttcaacccgtgaccttgctgtcacatgacaacaactttacc 8897923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 11001057 - 11001109
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||| | ||||||| | ||||||||| |||||||||||||||||||||    
T  11001057 tgttttcagaatttgaacccgcgacctttcaatcacatgacaacaactttacc 11001109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 22598185 - 22598133
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||| ||||||| |||||||||||||||  ||||||||||||||||    
T  22598185 tgtttccaggatttgaacccgtgacctttcagtcatgtgacaacaactttacc 22598133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 26954160 - 26954108
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| ||||||||  | |||||||||||||||||||||    
T  26954160 tgtttccaggacttgaacccgtgaccttctaatcacatgacaacaactttacc 26954108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 31454216 - 31454164
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||||| ||||| ||||||||||||  ||||||||||||||| ||||    
T  31454216 tgttttcaggacatgaacatgtgacctttcaaccacatgacaacaactatacc 31454164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 45071293 - 45071241
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||| ||||||||| |||||||| || |||||||||||||||||||||    
T  45071293 tgtttccagaacttgaacccgtgaccttacaatcacatgacaacaactttacc 45071241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Complemental strand, 11748327 - 11748282
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaa 281  Q
    ||||| || |||||||||| ||||| ||||||||||||||||||||    
T  11748327 tgtttccaagacttgaacccgtgacatttcagtcacatgacaacaa 11748282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 285
Target Start/End: Original strand, 30962880 - 30962929
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttt 285  Q
    ||||| |||||||||||   ||||||||||| ||||||||||||||||||    
T  30962880 tgtttccaggacttgaagtcgtgacctttcaatcacatgacaacaacttt 30962929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 24365178 - 24365218
Alignment:
Q  247 cttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    |||||||| ||||| ||| ||||||||||||||||||||||    
T  24365178 cttgaacccgtgacattttagtcacatgacaacaactttac 24365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 44530177 - 44530125
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| || |||||||||| ||||||||  |||||||||||| ||||||||||    
T  44530177 tgtttccaagacttgaacccgtgaccttctagtcacatgacagcaactttacc 44530125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 8919 - 8867
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  8919 tgtttccaggaattgaacctgtgaccttacagtcacatgacaacaactttacc 8867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 4185 - 4134
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||||||||||    
T  4185 tgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 4134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 83903 - 83852
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    ||||| || |||||||||| ||||||||||||||||||||||||||||||||    
T  83903 tgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttac 83852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 288
Target Start/End: Original strand, 226520 - 226565
Alignment:
Q  243 aggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||| | |||||||||||||||||||||||||||||||||    
T  226520 aggacttgaatccgtgacctttcagtcacatgacaacaactttacc 226565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 10838 - 10786
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    |||||||||  |||||||| |||||||| ||||||||||||||||||||||||    
T  10838 tgttttcagaccttgaacccgtgaccttccagtcacatgacaacaactttacc 10786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 59005 - 58953
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| || ||||||    
T  59005 tgtttccaggacttgaacccgtgacctttcagtcacatgacaataagtttacc 58953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 24883 - 24926
Alignment:
Q  245 gacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||||||||  ||||||||||||||||||||||||||||||||    
T  24883 gacttgaacccatgacctttcagtcacatgacaacaactttacc 24926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 287
Target Start/End: Original strand, 46996 - 47041
Alignment:
Q  242 caggacttgaacctgtgacctttcagtcacatgacaacaactttac 287  Q
    ||||||||||||  |||||||||||||||| |||||||||||||||    
T  46996 caggacttgaactcgtgacctttcagtcacctgacaacaactttac 47041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 46859 - 46807
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||| ||||||||| ||||||||  |||||||||||||||||||||||    
T  46859 tgtttccagcacttgaacccgtgaccttctagtcacatgacaacaactttacc 46807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 286
Target Start/End: Complemental strand, 24692 - 24642
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 286  Q
    ||||| ||||||||||||| |||||||| ||||||| ||||||||||||||    
T  24692 tgtttccaggacttgaacccgtgaccttacagtcacttgacaacaacttta 24642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 35125 - 35167
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaa 278  Q
    ||||||||||||||||||| |||||||| ||||||||||||||    
T  35125 tgttttcaggacttgaacccgtgaccttacagtcacatgacaa 35167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 11159 - 11108
Alignment:
Q  236 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 288  Q
    ||||| ||||||||||||| |||||||||||||||||| | ||||||||||||    
T  11159 tgtttccaggacttgaacccgtgacctttcagtcacat-agaacaactttacc 11108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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