View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18056_high_30 (Length: 239)
Name: NF18056_high_30
Description: NF18056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18056_high_30 |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 30449922 - 30450144
Alignment:
| Q |
1 |
tagttttgtcaataatcattgatacaaaattaaaactaacacatgttaaaaacgagtaagaatcctctccatttatcaaaaaagag--agaaaacaagag |
98 |
Q |
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| T |
30449922 |
tagttttgtcaataatcattgatacaaaattaaaactaacacatgttaaaaacgagtaagaatcctcttcatttatcaaaaaagagagagaaaacaagag |
30450021 |
T |
|
| Q |
99 |
gtattatattgtattataatcttcaataatttgatttctgttacaatcgaagacatatttatattataggataatacaatgagctagaacatgtgtcaat |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
30450022 |
gtattatattgtattataatcttcaataatttgatttctgttacaatcgaagacatatttatattataggataatacaatgagctagaacatgtgtcaat |
30450121 |
T |
|
| Q |
199 |
gactaatgagtcaatgactagag |
221 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
30450122 |
gactaatgagtcaatgactagag |
30450144 |
T |
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