View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18056_low_30 (Length: 245)
Name: NF18056_low_30
Description: NF18056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18056_low_30 |
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Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 8 - 230
Target Start/End: Original strand, 46613181 - 46613403
Alignment:
| Q |
8 |
atcaatgacaaggagaaatcaggataaattagcaatcataattcattataaactgtaacatatgtatagaaaatttgcagacaaaggccactctacaatt |
107 |
Q |
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| T |
46613181 |
atcaatgacaaggagaaatcaggataaattagcaatcataattcattataaaatgtaacatatgtatagaaaatttgcagacaaaggccactctacaatt |
46613280 |
T |
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| Q |
108 |
aaacaagaattaagggaaaggaaacactatataagaattgagagagtgacatggttattcatttaatgccacttttcaaaaagctcgagcttagaagtaa |
207 |
Q |
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| T |
46613281 |
aaacatgaattaaggtgaaggaaacactatataagaattgagagagtgacatggttattcatttaatgccacttttaaaaaagctcgagcttagaagtaa |
46613380 |
T |
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| Q |
208 |
tgatattcaatatgatgatacat |
230 |
Q |
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| T |
46613381 |
tgatattcaatatgatgatacat |
46613403 |
T |
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