View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18058_high_21 (Length: 320)

Name: NF18058_high_21
Description: NF18058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18058_high_21
NF18058_high_21
[»] chr5 (8 HSPs)
chr5 (13-193)||(14515504-14515684)
chr5 (182-302)||(14515724-14515844)
chr5 (13-94)||(42729060-42729143)
chr5 (19-94)||(519664-519741)
chr5 (14-94)||(3413502-3413584)
chr5 (13-87)||(9335357-9335433)
chr5 (13-65)||(37251318-37251370)
chr5 (13-65)||(39655522-39655574)
[»] chr4 (8 HSPs)
chr4 (19-96)||(8847783-8847862)
chr4 (20-94)||(24630418-24630492)
chr4 (14-94)||(667882-667964)
chr4 (14-94)||(40976806-40976887)
chr4 (13-65)||(33110108-33110160)
chr4 (19-94)||(13567960-13568037)
chr4 (19-67)||(9416843-9416891)
chr4 (13-65)||(53896075-53896127)
[»] chr3 (9 HSPs)
chr3 (18-98)||(4501044-4501126)
chr3 (13-65)||(3589095-3589147)
chr3 (13-65)||(1231905-1231957)
chr3 (13-65)||(24899343-24899395)
chr3 (13-65)||(24905809-24905861)
chr3 (47-97)||(4644568-4644619)
chr3 (20-69)||(4674889-4674939)
chr3 (19-67)||(545832-545880)
chr3 (13-65)||(23194615-23194667)
[»] chr1 (11 HSPs)
chr1 (13-94)||(19329304-19329386)
chr1 (13-65)||(36084453-36084505)
chr1 (13-85)||(8995652-8995726)
chr1 (13-65)||(15162122-15162174)
chr1 (14-94)||(9315891-9315973)
chr1 (19-99)||(47293946-47294028)
chr1 (36-87)||(13248702-13248753)
chr1 (13-96)||(21814746-21814831)
chr1 (13-65)||(9293110-9293162)
chr1 (13-78)||(44785396-44785463)
chr1 (37-85)||(47646606-47646654)
[»] chr7 (12 HSPs)
chr7 (13-85)||(30879558-30879630)
chr7 (132-203)||(20185266-20185337)
chr7 (14-94)||(29865142-29865224)
chr7 (13-65)||(29032206-29032258)
chr7 (14-94)||(5222283-5222365)
chr7 (194-272)||(20185381-20185459)
chr7 (19-94)||(27954010-27954087)
chr7 (14-94)||(43364178-43364260)
chr7 (36-87)||(26841240-26841291)
chr7 (16-65)||(1275289-1275338)
chr7 (19-94)||(9701721-9701798)
chr7 (13-65)||(22909813-22909865)
[»] chr6 (10 HSPs)
chr6 (14-96)||(13105132-13105215)
chr6 (13-65)||(9517859-9517911)
chr6 (13-95)||(18765617-18765701)
chr6 (13-60)||(1455487-1455534)
chr6 (13-60)||(1467179-1467226)
chr6 (13-65)||(25977645-25977697)
chr6 (13-65)||(34007152-34007204)
chr6 (17-65)||(34914389-34914437)
chr6 (18-94)||(1051150-1051229)
chr6 (13-65)||(14271368-14271420)
[»] chr8 (12 HSPs)
chr8 (14-96)||(4435094-4435178)
chr8 (13-65)||(13510659-13510711)
chr8 (13-65)||(13600189-13600241)
chr8 (19-86)||(21693150-21693219)
chr8 (19-88)||(2268566-2268637)
chr8 (13-85)||(22242633-22242707)
chr8 (14-85)||(22226898-22226971)
chr8 (14-85)||(22233240-22233313)
chr8 (13-87)||(9907116-9907192)
chr8 (13-65)||(17993562-17993614)
chr8 (20-88)||(44246123-44246193)
chr8 (13-65)||(4861365-4861417)
[»] chr2 (5 HSPs)
chr2 (14-94)||(13031966-13032046)
chr2 (13-88)||(16105095-16105172)
chr2 (13-65)||(21160675-21160727)
chr2 (13-86)||(22599906-22599980)
chr2 (14-65)||(44611208-44611260)
[»] scaffold0291 (1 HSPs)
scaffold0291 (14-78)||(1923-1989)
[»] scaffold0515 (1 HSPs)
scaffold0515 (13-65)||(7452-7504)
[»] scaffold0306 (1 HSPs)
scaffold0306 (13-65)||(7462-7514)
[»] scaffold0160 (1 HSPs)
scaffold0160 (13-65)||(34736-34788)
[»] scaffold0152 (1 HSPs)
scaffold0152 (13-65)||(25073-25125)
[»] scaffold0265 (1 HSPs)
scaffold0265 (13-96)||(17978-18063)
[»] scaffold0091 (1 HSPs)
scaffold0091 (13-65)||(14880-14932)


Alignment Details
Target: chr5 (Bit Score: 161; Significance: 7e-86; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 13 - 193
Target Start/End: Original strand, 14515504 - 14515684
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgatacaaaaatatttacctttgatactgcatcagtaacttgttttattgca 112  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14515504 aatattgattgttgaacggcttgaatatcgcactagtccttgtggagacgatacaaaaatatttacctttgatactgcatcagtaacttgttttattgca 14515603  T
Q  113 aatgttttgaggactgtgctaaaagtatatttagcgtggttatcgattttggaattagtgcgatgaccaaatcaaaagcgg 193  Q
    |||||||||||||||| ||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  14515604 aatgttttgaggactgcgctaaaagtgtatttagcgtagttatcgattttggaatttgtgcgatgaccaaatcaaaagcgg 14515684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 182 - 302
Target Start/End: Original strand, 14515724 - 14515844
Alignment:
Q  182 aatcaaaagcggatttgacgtaaacactgttttgggatttttgcgatgaccaaaccaaaaaaggatctagcgtagtcattgactttaaaatttgcgtaat 281  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14515724 aatcaaaagtggatttgacgtaatcactgttttgggatttttgcgatgaccaaaccaaaaaaggatctagcgtagtcattgactttaaaatttgcgtaat 14515823  T
Q  282 gattgaatcaaatgtggattt 302  Q
    |||||||||||| ||||||||    
T  14515824 gattgaatcaaaagtggattt 14515844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 42729143 - 42729060
Alignment:
Q  13 aatattgattgttgaacggctt-gaatatcgcattagtccttgtggagacgat-acaaaaatatttacctttgatactgcatca 94  Q
    |||||||||||||||| | ||| |||||| |||  ||||| |||||||||||| ||||||||| |||| ||||||||| |||||    
T  42729143 aatattgattgttgaatgacttagaatattgcaccagtccctgtggagacgataacaaaaatacttacttttgatactacatca 42729060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 519664 - 519741
Alignment:
Q  19 gattgttgaacggcttgaatatcgcattagtccttgtggagacgat--acaaaaatatttacctttgatactgcatca 94  Q
    |||||||||||||||||||||||||  |||| | ||||||||| ||  ||||||||| |||| ||| ||||| |||||    
T  519664 gattgttgaacggcttgaatatcgcgctagttcctgtggagactatacacaaaaatacttacttttaatactacatca 519741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 3413502 - 3413584
Alignment:
Q  14 atattgattgttgaacggctt-gaatatcgcattagtccttgtggagacgat-acaaaaatatttacctttgatactgcatca 94  Q
    |||| ||||| |||| ||||| ||||||||||  ||||| |||||||||||| ||||||||| |||| ||||||||| |||||    
T  3413502 atatcgattgctgaatggcttagaatatcgcaccagtccatgtggagacgatgacaaaaatacttacttttgatactacatca 3413584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 9335357 - 9335433
Alignment:
Q  13 aatattgattgttgaacggctt-gaatatcgcattagtccttgtggagacgat-acaaaaatatttacctttgatac 87  Q
    ||||| |||||||||||||||| || |||||||  ||||| |||||||||||| ||| ||||| |||| ||||||||    
T  9335357 aatatagattgttgaacggcttagattatcgcaccagtccctgtggagacgataacataaatacttacttttgatac 9335433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 37251370 - 37251318
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||||||| | ||| |||||| |  ||||||||||||||||||||    
T  37251370 aatattgattgttgaatgactttaatatcacgctagtccttgtggagacgata 37251318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 39655574 - 39655522
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||||||| ||||||||||||||  |||||  | |||||||||||    
T  39655574 aatattgattgttgaatggcttgaatatcgcgctagtctatatggagacgata 39655522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 8847862 - 8847783
Alignment:
Q  19 gattgttgaacggcttgaatatcgcattagtccttgtggagacgat--acaaaaatatttacctttgatactgcatcagt 96  Q
    |||||||||||||||||||||||||  |||||||||||||||||||  ||||||||| |||| ||||||||| |||||||    
T  8847862 gattgttgaacggcttgaatatcgcgctagtccttgtggagacgatacacaaaaatacttacttttgatactacatcagt 8847783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 24630418 - 24630492
Alignment:
Q  20 attgttgaacggcttgaatatcgcattagtccttgtggagacgatacaaaaatatttacctttgatactgcatca 94  Q
    ||||||||||| ||| |||||| |  || |||||||||||| ||||||||||||||||| ||||||||| |||||    
T  24630418 attgttgaacgactttaatatcacgctactccttgtggagatgatacaaaaatatttacttttgatactacatca 24630492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 667882 - 667964
Alignment:
Q  14 atattgattgttgaacggctt-gaatatcgcattagtccttgtggagacgat-acaaaaatatttacctttgatactgcatca 94  Q
    |||| |||||||||||||||| ||||||||||| ||||| | ||||||| || ||||||||| |||| ||||||||| |||||    
T  667882 atatcgattgttgaacggcttagaatatcgcatcagtccctatggagacaataacaaaaatacttacttttgatactacatca 667964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 40976806 - 40976887
Alignment:
Q  14 atattgattgttgaacggcttgaatatcgcattagtccttgtggagacgat-acaaaaatatttacctttgatactgcatca 94  Q
    |||| |||||||||||||||| |||||||||  ||||| |||||||| ||| ||| ||||| |||| ||||||||| |||||    
T  40976806 atatagattgttgaacggcttaaatatcgcaccagtccctgtggagaagataacataaatacttacttttgatactacatca 40976887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 33110160 - 33110108
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||||||| || |||||||||||  |||||| |||||||||||||    
T  33110160 aatattgattgttgaatggtttgaatatcgcgctagtccatgtggagacgata 33110108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 13568037 - 13567960
Alignment:
Q  19 gattgttgaacggctt-gaatatcgcattagtccttgtggagacgat-acaaaaatatttacctttgatactgcatca 94  Q
    |||||||||||||||| ||||||||||  ||||| ||||||||  || ||||||||| |||| |||||||| ||||||    
T  13568037 gattgttgaacggcttagaatatcgcaccagtccctgtggagataataacaaaaatacttacttttgatacagcatca 13567960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 9416891 - 9416843
Alignment:
Q  19 gattgttgaacggcttgaatatcgcattagtccttgtggagacgataca 67  Q
    ||||||||||||||||||||||||   |||||| | |||||||||||||    
T  9416891 gattgttgaacggcttgaatatcgttctagtccctatggagacgataca 9416843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 53896075 - 53896127
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||| ||||||||||| | |||||||||||| ||||||| |||||| ||||||    
T  53896075 aatactgattgttgaatgacttgaatatcgcgttagtccgtgtggaaacgata 53896127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 8e-18; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 4501126 - 4501044
Alignment:
Q  18 tgattgttgaacggctt-gaatatcgcattagtccttgtggagacgat-acaaaaatatttacctttgatactgcatcagtaa 98  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||||| ||||||||| |||| ||||||||| |||||||||    
T  4501126 tgattgttgaacggcttagaatatcgcactagtccatgtggagacgataacaaaaatacttacttttgatactacatcagtaa 4501044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 3589095 - 3589147
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||||||| ||||||||||||||| |||||| ||| |||||||||    
T  3589095 aatattgattgttgaatggcttgaatatcgcactagtccctgttgagacgata 3589147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 1231957 - 1231905
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||||||| | ||||||||||||  |||||| |||||||||||||    
T  1231957 aatattgattgttgaatgacttgaatatcgcgctagtccctgtggagacgata 1231905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 24899395 - 24899343
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||| ||||| | ||||||||||||| |||||| |||||||||||||    
T  24899395 aatattgattattgaatgtcttgaatatcgcactagtccctgtggagacgata 24899343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 24905861 - 24905809
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||| ||||| | ||||||||||||| |||||| |||||||||||||    
T  24905861 aatattgattattgaatgtcttgaatatcgcactagtccctgtggagacgata 24905809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 4644568 - 4644619
Alignment:
Q  47 agtccttgtggagacgat-acaaaaatatttacctttgatactgcatcagta 97  Q
    |||||||||||||||||| ||||||||| |||| ||||||||| ||||||||    
T  4644568 agtccttgtggagacgataacaaaaatacttacttttgatactacatcagta 4644619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 4674939 - 4674889
Alignment:
Q  20 attgttgaacggctt-gaatatcgcattagtccttgtggagacgatacaaa 69  Q
    ||||||||||||||| ||||||||||  ||||| |||||||||||||||||    
T  4674939 attgttgaacggcttagaatatcgcaccagtccctgtggagacgatacaaa 4674889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 545880 - 545832
Alignment:
Q  19 gattgttgaacggcttgaatatcgcattagtccttgtggagacgataca 67  Q
    |||||||||||||||||||||| |||  ||| | |||||||||||||||    
T  545880 gattgttgaacggcttgaatattgcaccagttcctgtggagacgataca 545832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 23194615 - 23194667
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||| ||| | ||||||||||||  |||||| |||||||||||||    
T  23194615 aatattgattgtcgaatgacttgaatatcgcgctagtccctgtggagacgata 23194667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 8e-18; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 19329386 - 19329304
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata-caaaaatatttacctttgatactgcatca 94  Q
    ||||| ||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||| |||| ||||||||| |||||    
T  19329386 aatatcgattgttgaacggcttgaatatcgcaccagtccctgtggagacgatagcaaaaatacttacttttgatactacatca 19329304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 36084453 - 36084505
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||||||| |||||||||||||| ||||||||||| |||||||||    
T  36084453 aatattgattgttgaatggcttgaatatcgcgttagtccttgtagagacgata 36084505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 8995726 - 8995652
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgat--acaaaaatatttacctttgat 85  Q
    |||||||||||||||| ||||||||||||||  |||||| ||||||||||||  ||||||||| |||| ||||||    
T  8995726 aatattgattgttgaatggcttgaatatcgcgctagtccctgtggagacgatacacaaaaatacttacttttgat 8995652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 15162122 - 15162174
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||||||| ||||||||||||||  |||||| |||||||||||||    
T  15162122 aatattgattgttgaatggcttgaatatcgcgctagtccctgtggagacgata 15162174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 9315973 - 9315891
Alignment:
Q  14 atattgattgttgaacggctt-gaatatcgcattagtccttgtggagacgat-acaaaaatatttacctttgatactgcatca 94  Q
    |||| |||||||||||| ||| ||||||||||| ||||| |||||||||||| ||| ||||| |||| ||||||||| |||||    
T  9315973 atatagattgttgaacgacttagaatatcgcatcagtccctgtggagacgataacataaatacttacttttgatactacatca 9315891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 47294028 - 47293946
Alignment:
Q  19 gattgttgaacggctt-gaatatcgcattagtccttgtggagacgata-caaaaatatttacctttgatactgcatcagtaac 99  Q
    |||||||||||||||| ||||||| ||| ||| | ||||||||||||| ||||||||||||| ||| ||||| ||||| ||||    
T  47294028 gattgttgaacggcttagaatatcacatcagttcatgtggagacgataacaaaaatatttacttttaatactacatcactaac 47293946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 13248753 - 13248702
Alignment:
Q  36 aatatcgcattagtccttgtggagacgatacaaaaatatttacctttgatac 87  Q
    ||||| ||| ||||||||||||| |||||||||||||| |||| ||||||||    
T  13248753 aatattgcactagtccttgtggaaacgatacaaaaatacttacttttgatac 13248702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 21814831 - 21814746
Alignment:
Q  13 aatattgattgttgaacggctt-gaatatcgcattagtccttgtggagacgat-acaaaaatatttacctttgatactgcatcagt 96  Q
    ||||| |||||||||||||| | ||||||||||  ||||| |||||||||||| || |||| | |||| ||||||||| |||||||    
T  21814831 aatatagattgttgaacggcgtagaatatcgcaccagtccctgtggagacgataactaaaaaacttacttttgatactacatcagt 21814746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 9293110 - 9293162
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||||||| | ||||||||||||  |||||| | |||||||||||    
T  9293110 aatattgattgttgaatgacttgaatatcgcgctagtccctatggagacgata 9293162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 44785463 - 44785396
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgat--acaaaaatatttac 78  Q
    |||||||||||||||||||| ||||| || |  |||||| ||||||||| ||  ||||||||||||||    
T  44785463 aatattgattgttgaacggcatgaatgtcacgctagtccctgtggagacaatacacaaaaatatttac 44785396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 47646654 - 47646606
Alignment:
Q  37 atatcgcattagtccttgtggagacgatacaaaaatatttacctttgat 85  Q
    |||||||| |||||| || |||||||||||||||||| |||| ||||||    
T  47646654 atatcgcactagtccctgaggagacgatacaaaaatacttacttttgat 47646606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 30879630 - 30879558
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgatacaaaaatatttacctttgat 85  Q
    |||||| |||||||||||  || ||||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  30879630 aatattaattgttgaacgatttaaatatcgcactagtccttgtggagacaatacaaaaatatttacttttgat 30879558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 132 - 203
Target Start/End: Original strand, 20185266 - 20185337
Alignment:
Q  132 taaaagtatatttagcgtggttatcgattttggaattagtgcgatgaccaaatcaaaagcggatttgacgta 203  Q
    |||||||||||||||||| |||||||||||| ||||  |||| |||||||||||||||| | ||||||||||    
T  20185266 taaaagtatatttagcgtagttatcgattttagaatatgtgcaatgaccaaatcaaaagagaatttgacgta 20185337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 29865142 - 29865224
Alignment:
Q  14 atattgattgttgaacggcttgaatatcgcattagtccttgtggagacgat--acaaaaatatttacctttgatactgcatca 94  Q
    |||| |||||||||||| ||||||||||||| |||||| ||||||||||||  ||||||||| |||| ||||||||| |||||    
T  29865142 atatcgattgttgaacgacttgaatatcgcactagtccatgtggagacgatacacaaaaatacttacttttgatactacatca 29865224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 29032258 - 29032206
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||||||| ||||||||||||||  |||||||||||| |||||||    
T  29032258 aatattgattgttgaatggcttgaatatcgcgctagtccttgtggtgacgata 29032206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 5222365 - 5222283
Alignment:
Q  14 atattgattgttgaacggctt-gaatatcgcattagtccttgtggagacgat-acaaaaatatttacctttgatactgcatca 94  Q
    |||| |||||||||| ||||| ||||||||||  ||||| |||||||||||| ||||||||| |||| ||||||||| |||||    
T  5222365 atatcgattgttgaatggcttagaatatcgcaccagtccctgtggagacgataacaaaaatacttacttttgatactacatca 5222283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 20185381 - 20185459
Alignment:
Q  194 atttgacgtaaacactgttttgggatttttgcgatgaccaaaccaaaaaaggatctagcgtagtcattgactttaaaat 272  Q
    ||||||||||| ||||  |||||||| ||||||||| ||||||||||| ||||||||| ||| |||  ||||| |||||    
T  20185381 atttgacgtaatcactaatttgggatctttgcgatggccaaaccaaaagaggatctagtgtaatcaccgacttcaaaat 20185459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 27954087 - 27954010
Alignment:
Q  19 gattgttgaacggcttgaatatcgcattagtccttgtggagacgat--acaaaaatatttacctttgatactgcatca 94  Q
    |||||||||||||||||||||||||  |||||| | | ||||||||  ||||||||| |||| ||||||||| |||||    
T  27954087 gattgttgaacggcttgaatatcgcgctagtccctctagagacgatacacaaaaatacttacttttgatactacatca 27954010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 43364260 - 43364178
Alignment:
Q  14 atattgattgttgaacggctt-gaatatcgcattagtccttgtggagacgat-acaaaaatatttacctttgatactgcatca 94  Q
    |||| |||||||||||||||| ||||||||||  ||||| |||||||||||| ||| ||||| |||| ||||||||| |||||    
T  43364260 atatagattgttgaacggcttagaatatcgcaccagtccctgtggagacgataacataaatacttacttttgatactacatca 43364178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 26841240 - 26841291
Alignment:
Q  36 aatatcgcattagtccttgtggagacgatacaaaaatatttacctttgatac 87  Q
    ||||||||| ||||||||||||| | |||||||||||| |||| ||||||||    
T  26841240 aatatcgcactagtccttgtggatatgatacaaaaatacttacttttgatac 26841291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 1275289 - 1275338
Alignment:
Q  16 attgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    ||||||||||||| | ||||||||||||  |||||| |||||||||||||    
T  1275289 attgattgttgaatgacttgaatatcgcgctagtccctgtggagacgata 1275338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 9701798 - 9701721
Alignment:
Q  19 gattgttgaacggctt-gaatatcgcattagtccttgtggagacgat-acaaaaatatttacctttgatactgcatca 94  Q
    |||||||||||||||| ||||||||||  ||||| ||||||||  || ||||||||| |||| |||||||| ||||||    
T  9701798 gattgttgaacggcttagaatatcgcaccagtccctgtggagataataacaaaaatacttacttttgatacagcatca 9701721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 22909813 - 22909865
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||||||| |||||||||||| |  |||||| |||||||| ||||    
T  22909813 aatattgattgttgaatggcttgaatatcacgctagtccctgtggagatgata 22909865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 13105215 - 13105132
Alignment:
Q  14 atattgattgttgaacggcttgaatatcgcattagtccttgtggagacgat-acaaaaatatttacctttgatactgcatcagt 96  Q
    |||||||||||||||| ||||||||||| ||  ||||| |||||||||||| ||||||||| |||| ||||||||| |||||||    
T  13105215 atattgattgttgaacagcttgaatatcacaccagtccatgtggagacgataacaaaaatacttacttttgatactacatcagt 13105132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 9517911 - 9517859
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  9517911 aatattgattgttgaatggcttgaatatcgcgctagtccttgtggagacgata 9517859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 18765701 - 18765617
Alignment:
Q  13 aatattgattgttgaacggctt-gaatatcgcattagtccttgtggagacgat-acaaaaatatttacctttgatactgcatcag 95  Q
    ||||| |||||||||||||||| |||||||||| |||||| | |||||||||| ||| ||||| |||| ||||||||| ||||||    
T  18765701 aatatagattgttgaacggcttagaatatcgcactagtccctatggagacgataacagaaatacttacttttgatactacatcag 18765617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 1455487 - 1455534
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggaga 60  Q
    |||||||||||||||| ||||||||||||||| |||||| ||||||||    
T  1455487 aatattgattgttgaatggcttgaatatcgcactagtccctgtggaga 1455534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 1467179 - 1467226
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggaga 60  Q
    |||||||||||||||| ||||||||||||||| |||||| ||||||||    
T  1467179 aatattgattgttgaatggcttgaatatcgcactagtccctgtggaga 1467226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 25977645 - 25977697
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||||||| ||||||||||||||  |||||| | |||||||||||    
T  25977645 aatattgattgttgaatggcttgaatatcgcgctagtccctatggagacgata 25977697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 34007152 - 34007204
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||||||| ||||||||||||||  |||||  |||||||||||||    
T  34007152 aatattgattgttgaatggcttgaatatcgcgctagtctctgtggagacgata 34007204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 34914389 - 34914437
Alignment:
Q  17 ttgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||| ||||||||||||||  |||||| |||||||||||||    
T  34914389 ttgattgttgaatggcttgaatatcgcgctagtccctgtggagacgata 34914437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 1051229 - 1051150
Alignment:
Q  18 tgattgttgaacggctt-gaatatcgcattagtccttgtggagacgata--caaaaatatttacctttgatactgcatca 94  Q
    ||||||||||||||||| ||||||||||  ||||| | |||||||||||   ||||||| |||| ||||||||| |||||    
T  1051229 tgattgttgaacggcttagaatatcgcaccagtccctatggagacgataacaaaaaatacttacttttgatactacatca 1051150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 14271368 - 14271420
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||||||| | ||| ||||||||  |||||| |||||||||||||    
T  14271368 aatattgattgttgaatgacttaaatatcgcgctagtccctgtggagacgata 14271420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 4435178 - 4435094
Alignment:
Q  14 atattgattgttgaacggcttgaatatcgcattagtccttgtggagacgat--acaaaaatatttacctttgatactgcatcagt 96  Q
    |||| |||||||||||| ||||||||||||  || ||||||||||||||||  ||||||||| |||| ||||||||| |||||||    
T  4435178 atatcgattgttgaacgacttgaatatcgcgctaatccttgtggagacgatgcacaaaaatacttacttttgatactacatcagt 4435094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 13510659 - 13510711
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    ||||||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  13510659 aatattgattgttgaattgcttgaatatcgcgttagtccttgtggagacgata 13510711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 13600189 - 13600241
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    ||||||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  13600189 aatattgattgttgaattgcttgaatatcgcgttagtccttgtggagacgata 13600241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 21693150 - 21693219
Alignment:
Q  19 gattgttgaacggcttgaatatcgcattagtccttgtggagacgat--acaaaaatatttacctttgata 86  Q
    |||||||||||||||||||| ||||  |||||||||||||||||||  ||||||||| |||| |||||||    
T  21693150 gattgttgaacggcttgaatgtcgcgctagtccttgtggagacgatacacaaaaatacttacttttgata 21693219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 2268566 - 2268637
Alignment:
Q  19 gattgttgaacggctt-gaatatcgcattagtccttgtggagacgat-acaaaaatatttacctttgatact 88  Q
    |||||||||||||||| |||||||||| |||||| | |||||||||| ||||||||| |||| |||||||||    
T  2268566 gattgttgaacggcttagaatatcgcactagtccctatggagacgataacaaaaatacttacttttgatact 2268637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 22242707 - 22242633
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgat--acaaaaatatttacctttgat 85  Q
    |||||||||||||||  ||||||||||||||  |||||| ||||||||||||  ||||||||| |||| ||||||    
T  22242707 aatattgattgttgagtggcttgaatatcgcgctagtccatgtggagacgatacacaaaaatacttacttttgat 22242633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 22226971 - 22226898
Alignment:
Q  14 atattgattgttgaacggcttgaatatcgcattagtccttgtggagacgat--acaaaaatatttacctttgat 85  Q
    ||||| |||||| || ||||||||||||||| |||||| ||||||||||||  ||||||||| |||| ||||||    
T  22226971 atattaattgttaaatggcttgaatatcgcactagtccctgtggagacgatacacaaaaatacttacttttgat 22226898  T

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Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 22233313 - 22233240
Alignment:
Q  14 atattgattgttgaacggcttgaatatcgcattagtccttgtggagacgat--acaaaaatatttacctttgat 85  Q
    ||||| |||||| || ||||||||||||||| |||||| ||||||||||||  ||||||||| |||| ||||||    
T  22233313 atattaattgttaaatggcttgaatatcgcactagtccctgtggagacgatacacaaaaatacttacttttgat 22233240  T

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Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 9907116 - 9907192
Alignment:
Q  13 aatattgattgttgaacggctt-gaatatcgcattagtccttgtggagacgat-acaaaaatatttacctttgatac 87  Q
    ||||| ||||||||||||||||  |||||||||  ||||| |||||||||||| ||||||||| |||| ||||||||    
T  9907116 aatatcgattgttgaacggcttataatatcgcaccagtccatgtggagacgataacaaaaatacttacttttgatac 9907192  T

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Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 17993562 - 17993614
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||||||| ||||||||||||||  |||| | |||||||||||||    
T  17993562 aatattgattgttgaatggcttgaatatcgcgctagttcctgtggagacgata 17993614  T

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Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 44246123 - 44246193
Alignment:
Q  20 attgttgaacggctt-gaatatcgcattagtccttgtggagacgat-acaaaaatatttacctttgatact 88  Q
    ||||||||||||||| ||||||||||  ||||| |||||||||||| ||| ||||| |||| |||||||||    
T  44246123 attgttgaacggcttagaatatcgcaccagtccctgtggagacgataacataaatacttacttttgatact 44246193  T

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Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 4861417 - 4861365
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||||||| | ||||||||||||  |||||| ||| |||||||||    
T  4861417 aatattgattgttgaatgacttgaatatcgcgctagtccctgtagagacgata 4861365  T

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Target: chr2 (Bit Score: 37; Significance: 0.000000000007; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 13031966 - 13032046
Alignment:
Q  14 atattgattgttgaacggcttgaatatcgcattagtccttgtggagacgatacaaaaatatttacctttgatactgcatca 94  Q
    ||||| ||||||||||||||| ||||||||| || || || || |||||||||||||||| |||| | ||||||| |||||    
T  13031966 atattaattgttgaacggcttaaatatcgcactaatctttatgaagacgatacaaaaatacttacttatgatactacatca 13032046  T

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Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 16105095 - 16105172
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgat--acaaaaatatttacctttgatact 88  Q
    ||||| |||| |||||||| ||||||||||| |||| |||||| ||||||||  ||||||||| |||| |||||||||    
T  16105095 aatatcgattattgaacggtttgaatatcgcgttagcccttgtagagacgatacacaaaaatacttacttttgatact 16105172  T

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Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 21160675 - 21160727
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||||||| | ||||||||||||  |||||| |||||||||||||    
T  21160675 aatattgattgttgaatgacttgaatatcgcgctagtccctgtggagacgata 21160727  T

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Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 22599980 - 22599906
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgat-acaaaaatatttacctttgata 86  Q
    ||||| |||||||||||  ||| | ||| ||| ||||||||||||||||||| ||||||||| |||| |||||||    
T  22599980 aatatcgattgttgaacaacttaagtattgcactagtccttgtggagacgataacaaaaatacttacttttgata 22599906  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 44611260 - 44611208
Alignment:
Q  14 atattgattgttgaacggctt-gaatatcgcattagtccttgtggagacgata 65  Q
    ||||| ||||||||||||||| ||||||||||  ||||| |||||||||||||    
T  44611260 atattaattgttgaacggcttagaatatcgcaccagtccctgtggagacgata 44611208  T

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Target: scaffold0291 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 1923 - 1989
Alignment:
Q  14 atattgattgttgaacggctt-gaatatcgcattagtccttgtggagacgat-acaaaaatatttac 78  Q
    |||| |||||||||||||||| ||||||||||  |||||||||||||||||| ||| ||||||||||    
T  1923 atatagattgttgaacggcttagaatatcgcaccagtccttgtggagacgataacataaatatttac 1989  T

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Target: scaffold0515 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 7452 - 7504
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||||||| ||||||||||||||  |||||| | |||||||||||    
T  7452 aatattgattgttgaatggcttgaatatcgcgctagtccctctggagacgata 7504  T

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Target: scaffold0306 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 7462 - 7514
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||||||| ||||||||||||||  |||||| | |||||||||||    
T  7462 aatattgattgttgaatggcttgaatatcgcgctagtccctctggagacgata 7514  T

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Target: scaffold0160 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 34788 - 34736
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    ||||||| |||||||| ||||||||||||||  |||||| |||||||||||||    
T  34788 aatattgtttgttgaatggcttgaatatcgcgctagtccctgtggagacgata 34736  T

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Target: scaffold0152 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 25073 - 25125
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||||||| ||||||||||||||  |||||| | |||||||||||    
T  25073 aatattgattgttgaatggcttgaatatcgcgctagtccctctggagacgata 25125  T

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Target: scaffold0265 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 17978 - 18063
Alignment:
Q  13 aatattgattgttgaacggctt-gaatatcgcattagtccttgtggagacgat-acaaaaatatttacctttgatactgcatcagt 96  Q
    ||||| |||||||||||||| | ||||||||||  ||||| |||||||||||| || |||| | |||| ||||||||| |||||||    
T  17978 aatatagattgttgaacggcgtagaatatcgcaccagtccctgtggagacgataactaaaaaacttacttttgatactacatcagt 18063  T

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Target: scaffold0091 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 14880 - 14932
Alignment:
Q  13 aatattgattgttgaacggcttgaatatcgcattagtccttgtggagacgata 65  Q
    |||||||||||||||| |  |||||||||||  |||||| |||||||||||||    
T  14880 aatattgattgttgaatgatttgaatatcgcgctagtccctgtggagacgata 14932  T

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