View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18058_high_30 (Length: 262)
Name: NF18058_high_30
Description: NF18058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18058_high_30 |
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Alignment Details
Target: chr5 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 135 - 256
Target Start/End: Original strand, 12274155 - 12274276
Alignment:
| Q |
135 |
ctaaagttgctatttgaatattgaatgaacactaacatattgcatatttttgcgaacagatgcacgcagaattccaagttctttctccgttggtgtccac |
234 |
Q |
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| T |
12274155 |
ctaaaattgctatttgaatattgaatgaacactaacatattgcatatttttgcgaacagatgcacgcagaattccaagttctttctccgttggtgtccac |
12274254 |
T |
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| Q |
235 |
cagagagactcatattcttcga |
256 |
Q |
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| T |
12274255 |
cagagagactcattttcttcga |
12274276 |
T |
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