View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18058_high_37 (Length: 238)
Name: NF18058_high_37
Description: NF18058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18058_high_37 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 38807334 - 38807555
Alignment:
| Q |
17 |
agcatagtgtgaagaagattgtgccatttgaaaactacgaatgttagatatgatatttaagatgttcttaccttttaagagattgatttgtttaatagca |
116 |
Q |
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| T |
38807334 |
agcatagtgtgaagaagattgtgccatttgaaaactacgaatgttagatatgatatttaagatgttcttaccttttaagagattgatttgtttaatagca |
38807433 |
T |
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| Q |
117 |
atgtgaaggaaagaaagatattgtcttggaaagaaaggagaataaaatagtgatgaaagtggaaaaccaataaaatgaatgcatttggattattaagttg |
216 |
Q |
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| T |
38807434 |
atgtgaaggaaagaaagatattgtcttggaaagaaaggagaataaaatagtgatgaaagtggaaaaccaataaaatgaatgcatttggattattaagttg |
38807533 |
T |
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| Q |
217 |
taaggaacaggcacatgtattt |
238 |
Q |
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|||||||||||||||||||||| |
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| T |
38807534 |
taaggaacaggcacatgtattt |
38807555 |
T |
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