View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18058_low_3 (Length: 633)

Name: NF18058_low_3
Description: NF18058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18058_low_3
NF18058_low_3
[»] chr6 (14 HSPs)
chr6 (131-633)||(24122771-24123268)
chr6 (218-507)||(21384079-21384368)
chr6 (342-458)||(24122702-24122818)
chr6 (257-494)||(14510169-14510408)
chr6 (218-495)||(34445763-34446028)
chr6 (403-497)||(8338184-8338278)
chr6 (219-345)||(24121956-24122082)
chr6 (337-451)||(10344997-10345111)
chr6 (337-480)||(1699547-1699690)
chr6 (403-506)||(9871623-9871728)
chr6 (414-493)||(23107766-23107845)
chr6 (249-303)||(20763847-20763901)
chr6 (252-289)||(2264665-2264702)
chr6 (438-507)||(11117637-11117706)
[»] chr8 (14 HSPs)
chr8 (219-506)||(34240686-34240973)
chr8 (219-506)||(30996938-30997220)
chr8 (319-497)||(17465980-17466159)
chr8 (337-506)||(24115260-24115429)
chr8 (401-506)||(24118962-24119067)
chr8 (215-297)||(38667751-38667833)
chr8 (521-560)||(26513095-26513134)
chr8 (214-263)||(20991298-20991347)
chr8 (407-504)||(44134082-44134179)
chr8 (220-293)||(44134289-44134362)
chr8 (219-303)||(15568471-15568555)
chr8 (401-450)||(17919520-17919569)
chr8 (417-497)||(10648891-10648971)
chr8 (406-454)||(20991554-20991602)
[»] chr2 (18 HSPs)
chr2 (219-493)||(28699647-28699919)
chr2 (251-506)||(37185325-37185579)
chr2 (219-506)||(44900068-44900355)
chr2 (219-476)||(19937471-19937728)
chr2 (215-476)||(31753014-31753274)
chr2 (218-491)||(13515880-13516153)
chr2 (221-481)||(10291580-10291841)
chr2 (217-385)||(2548390-2548558)
chr2 (322-506)||(32315778-32315961)
chr2 (355-506)||(44898921-44899070)
chr2 (403-507)||(12495073-12495177)
chr2 (401-496)||(13312281-13312375)
chr2 (401-488)||(13304997-13305084)
chr2 (217-288)||(29480133-29480204)
chr2 (357-435)||(13794391-13794469)
chr2 (355-429)||(17369327-17369401)
chr2 (249-294)||(26383864-26383909)
chr2 (403-506)||(31274970-31275074)
[»] chr3 (15 HSPs)
chr3 (217-494)||(32889511-32889789)
chr3 (356-507)||(7434623-7434774)
chr3 (376-506)||(16139713-16139843)
chr3 (222-493)||(19276332-19276605)
chr3 (406-506)||(7770462-7770563)
chr3 (417-493)||(806050-806126)
chr3 (401-506)||(16233714-16233820)
chr3 (403-492)||(30554155-30554244)
chr3 (355-457)||(14753743-14753845)
chr3 (401-506)||(940576-940680)
chr3 (10-132)||(26970746-26970867)
chr3 (217-506)||(28426323-28426610)
chr3 (417-479)||(14259557-14259619)
chr3 (355-493)||(30610443-30610581)
chr3 (417-493)||(809502-809578)
[»] chr4 (16 HSPs)
chr4 (219-506)||(25935081-25935368)
chr4 (372-504)||(13857844-13857976)
chr4 (372-496)||(13869374-13869498)
chr4 (217-497)||(34050182-34050461)
chr4 (407-504)||(50051140-50051237)
chr4 (217-429)||(36539441-36539652)
chr4 (227-427)||(36543920-36544120)
chr4 (355-506)||(12194816-12194967)
chr4 (217-288)||(49022584-49022655)
chr4 (355-506)||(17397685-17397837)
chr4 (216-293)||(50051309-50051386)
chr4 (403-507)||(43854569-43854673)
chr4 (403-449)||(1676810-1676856)
chr4 (403-449)||(1683338-1683384)
chr4 (337-374)||(49022688-49022725)
chr4 (403-493)||(9157270-9157360)
[»] chr5 (11 HSPs)
chr5 (255-508)||(27649053-27649306)
chr5 (6-130)||(21926629-21926753)
chr5 (222-460)||(16696005-16696242)
chr5 (401-506)||(29810220-29810331)
chr5 (337-504)||(25918521-25918688)
chr5 (337-506)||(26067053-26067222)
chr5 (337-493)||(20568252-20568406)
chr5 (406-458)||(37654209-37654261)
chr5 (406-458)||(37551379-37551431)
chr5 (406-458)||(37606866-37606918)
chr5 (406-458)||(37779076-37779128)
[»] chr1 (11 HSPs)
chr1 (215-506)||(22224477-22224766)
chr1 (401-506)||(14434142-14434246)
chr1 (404-509)||(23353327-23353432)
chr1 (10-130)||(41100896-41101016)
chr1 (417-506)||(52909461-52909550)
chr1 (217-298)||(52909659-52909740)
chr1 (337-429)||(51183718-51183810)
chr1 (401-455)||(19453901-19453955)
chr1 (403-476)||(23348066-23348139)
chr1 (255-303)||(3089078-3089126)
chr1 (438-506)||(11990925-11990992)
[»] chr7 (12 HSPs)
chr7 (401-506)||(18298926-18299031)
chr7 (218-294)||(12257421-12257497)
chr7 (215-506)||(2591736-2592025)
chr7 (404-506)||(17345811-17345914)
chr7 (404-506)||(4157690-4157792)
chr7 (404-504)||(15583062-15583162)
chr7 (215-506)||(10301900-10302188)
chr7 (362-451)||(27809544-27809633)
chr7 (219-298)||(18298777-18298856)
chr7 (219-435)||(23738250-23738465)
chr7 (406-451)||(12257270-12257316)
chr7 (469-507)||(18310714-18310752)
[»] scaffold0838 (1 HSPs)
scaffold0838 (417-493)||(2657-2733)
[»] scaffold0832 (1 HSPs)
scaffold0832 (417-493)||(2688-2764)
[»] scaffold0474 (1 HSPs)
scaffold0474 (223-288)||(6329-6394)
[»] scaffold0044 (1 HSPs)
scaffold0044 (414-455)||(58790-58831)
[»] scaffold0102 (1 HSPs)
scaffold0102 (401-493)||(25412-25504)
[»] scaffold0374 (1 HSPs)
scaffold0374 (401-466)||(12328-12393)
[»] scaffold0056 (1 HSPs)
scaffold0056 (249-298)||(19094-19143)


Alignment Details
Target: chr6 (Bit Score: 391; Significance: 0; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 131 - 633
Target Start/End: Original strand, 24122771 - 24123268
Alignment:
Q  131 ataaagagctataaatacccatcttgggatcattataaaggcattacataaacaatttctaatattgtactgactacaagtatagttgtggaccgtcaat 230  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||| |||||| |||||||||||||||||    
T  24122771 ataaagagctataaatacccatcttgggatcattataaaggcatcacataaacagtttctaatattgtactcactgcaagtacagttgtggaccgtcaat 24122870  T
Q  231 atattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaaggcaccgccttaacca 330  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||| ||| |||||||||||||||||    
T  24122871 atattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggtctaagcacgctcttccagaggcaccgccttaacca 24122970  T
Q  331 gctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaataccc 430  Q
    ||||| ||||||||||||| ||||||||     ||||||||||| |||||||||| ||||| | | |||||||||| |||||||||||||||||||||||    
T  24122971 gctcctagaagcatctagagcttggtaa-----cttaaggcccaacttgcttggggattaagttacgctgaaacaatcccacaaagggctataaataccc 24123065  T
Q  431 ctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagtacatataagtaaattcaatagcttcta 530  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24123066 ctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattctaatattgtactcactacaagtacatataagtaaattcaatagcttcta 24123165  T
Q  531 atcataacattatagaaaacaacatttctaatctttacaccaaaatcacttgggcaccaaatttctacaccaacatccctcatcattgatctcatcatct 630  Q
    |||||||||||| |||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24123166 atcataacattacagaaaacaacatttctcatctttgcaccaaaatcacctgggcaccaaatttctacaccaacatccctcatcattgatctcatcatct 24123265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 218 - 507
Target Start/End: Complemental strand, 21384368 - 21384079
Alignment:
Q  218 gtggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaaggc 317  Q
    ||||||||||||||||||| |||||   || ||||| ||||||||| |||||||||||||||||| ||||| | ||| ||| || | | || | | ||||    
T  21384368 gtggaccgtcaatatattcttaagggtctgaaagccttctagaaaggcttaggcgccctccagaatggctcctaaggactaggcacgcccttctagaggc 21384269  T
Q  318 accgccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagg 417  Q
     |||||||| |||||| | |||||||||||||    | ||||| ||| ||| || || ||||||||||  |||| ||  | | |||||||||| |||| |    
T  21384268 gccgccttagccagcttctagaagcatctagaagcggataaaaagacataaagctcatcttgcttggggcttaagtcgcgttaaaacaagccctcaaaag 21384169  T
Q  418 gctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagtacat 507  Q
    ||||||| |||| ||||| ||||||||| |||||||||||||| | ||| ||||||||||||| || ||||||||||| | |||||||||    
T  21384168 gctataattacctctcttgggatcattcccaaggcatcacaaacacagtaaaaaccctagattttattattgtactcattgcaagtacat 21384079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 342 - 458
Target Start/End: Original strand, 24122702 - 24122818
Alignment:
Q  342 catctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacccctcttaggatc 441  Q
    |||| ||| ||||||||||||||||||| |||| |||||||||| ||||| ||| ||||||||||||||| |||| ||||||||||||| |||| |||||    
T  24122702 catcaagagcttggtaaaatgacttaagacccaacttgcttggggattaagtcacgctgaaacaagcccataaagagctataaatacccatcttgggatc 24122801  T
Q  442 attctcaaggcatcaca 458  Q
    ||| | |||||||||||    
T  24122802 attataaaggcatcaca 24122818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 257 - 494
Target Start/End: Original strand, 14510169 - 14510408
Alignment:
Q  257 tagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaaggcaccgccttaaccagctcccagaagcatctagaccttggt 356  Q
    ||||||| |||| |||||||||| |||||||| ||||||||| |||  |||| ||| |||| |||||| ||| |||| | ||||||||||||| ||| ||    
T  14510169 tagaaaggcttaagcgccctccataagggctcctgaggcctaggcgtgctcttccagaggcgccgcctcaactagcttctagaagcatctagagcttagt 14510268  T
Q  357 aaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacccctctta--ggatcattctcaaggcat 454  Q
    |||| ||| || ||||||| |||||||||  |||| |   |   ||||||| ||||||||||||||||||||| | | ||  | ||||||||||||| ||    
T  14510269 aaaaagacatagggcccagtttgcttggggcttaagtttcgtaaaaacaagtccacaaagggctataaataccacccatatggaatcattctcaaggtat 14510368  T
Q  455 cacaaaaatagtcaaaaccctagattataatattgtactc 494  Q
       | ||| |||| |||||||||||| || ||||||||||    
T  14510369 ttaataaacagtctaaaccctagattctattattgtactc 14510408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 218 - 495
Target Start/End: Complemental strand, 34446028 - 34445763
Alignment:
Q  218 gtggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaaggc 317  Q
    |||||||||||||||  |||||||| | || ||||||||||||||| |||||| |||||||||||||||||   | | ||| || | | || ||||||||    
T  34446028 gtggaccgtcaatat--tcctaagggcctgaaagccctctagaaaggcttaggtgccctccagaagggctccgaaagactaggcacgcccttccaaaggc 34445931  T
Q  318 accgccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagg 417  Q
     || ||||| |||||| | ||||||           ||||||| ||| ||| ||||| ||||||||||  |||| ||| ||| ||  |||||||||||||    
T  34445930 gccaccttagccagcttctagaagcg----------ggtaaaaagacctaaagcccaacttgcttggggcttaagtcatgctaaacgaagcccacaaagg 34445841  T
Q  418 gctataaatacccctctt-aggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactca 495  Q
    ||||| |||||| |||||  ||||||||| |||||||||||||||| |||| |||||||| ||| || |||||||||||    
T  34445840 gctatgaatacctctcttggggatcattcccaaggcatcacaaaaacagtc-aaaccctatattctattattgtactca 34445763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 403 - 497
Target Start/End: Complemental strand, 8338278 - 8338184
Alignment:
Q  403 acaagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcact 497  Q
    ||||| |||| || |||||||||||||||||||  || ||||||||||||||||||||||||| | ||||| ||| || ||||||||||||||||    
T  8338278 acaagtccacgaaaggctataaatacccctcttgagaacattctcaaggcatcacaaaaatagactaaaccttagtttctaatattgtactcact 8338184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 219 - 345
Target Start/End: Original strand, 24121956 - 24122082
Alignment:
Q  219 tggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaaggca 318  Q
    ||||||||||||||||||||||||   || |||||||||||| || |||||||| |||||||| ||| || ||||||||| |||| | || | | |||      
T  24121956 tggaccgtcaatatattcctaagggtctgaaagccctctagataggcttaggcgtcctccagatgggatcatgaggcctaggcgcgcccttctagaggtg 24122055  T
Q  319 ccgccttaaccagctcccagaagcatc 345  Q
    ||| ||||||||||||| |||||||||    
T  24122056 ccgtcttaaccagctcctagaagcatc 24122082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 337 - 451
Target Start/End: Complemental strand, 10345111 - 10344997
Alignment:
Q  337 agaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacccctctta 436  Q
    ||||||||||||| ||| ||||||  ||||||||||||||||||||| | ||||| | | |   |||||||||||||||||  |||||||||| | |||     
T  10345111 agaagcatctagagcttagtaaaaatacttaaggcccagcttgcttgtggattaagttaggtaaaaacaagcccacaaaggattataaataccacccttg 10345012  T
Q  437 ggatcattctcaagg 451  Q
    |||| ||||||||||    
T  10345011 ggattattctcaagg 10344997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 480
Target Start/End: Complemental strand, 1699690 - 1699547
Alignment:
Q  337 agaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacccctctta 436  Q
    |||||||||||||    ||||||| ||| ||| ||||| |||||||| |  |||  ||| ||| ||||||| ||||||||||||||||| ||||| |||     
T  1699690 agaagcatctagaagcgggtaaaaagacctaaagcccaacttgcttgaggcttaggtcacgctaaaacaagtccacaaagggctataaacaccccacttg 1699591  T
Q  437 ggatcattctcaaggcatcacaaaaatagtcaaaaccctagatt 480  Q
     ||||||||| |||| |||||  ||| |||| ||||||||||||    
T  1699590 agatcattcttaaggtatcacgcaaacagtctaaaccctagatt 1699547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 403 - 506
Target Start/End: Complemental strand, 9871728 - 9871623
Alignment:
Q  403 acaagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcac--aaaaatagtcaaaaccctagattataatattgtactcactaca 500  Q
    |||||||||||||||||||||||||||||||||  ||  ||||||||||||| ||  ||| | | | ||||||||||  |   |||||||||||||||||    
T  9871728 acaagcccacaaagggctataaatacccctcttgagagtattctcaaggcatgacctaaacagattaaaaaccctagtcttagatattgtactcactaca 9871629  T
Q  501 agtaca 506  Q
    ||||||    
T  9871628 agtaca 9871623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 493
Target Start/End: Original strand, 23107766 - 23107845
Alignment:
Q  414 aagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtact 493  Q
    ||||||||||||||||||||||  || | ||||||| |||||||| ||| |||  |||||||||||| || |||||||||    
T  23107766 aagggctataaatacccctcttgagagctttctcaatgcatcacataaacagtgtaaaccctagattctattattgtact 23107845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 303
Target Start/End: Original strand, 20763847 - 20763901
Alignment:
Q  249 aagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgc 303  Q
    ||||||||||||||| || || ||||||| |||||||||| ||||||||| ||||    
T  20763847 aagccctctagaaaggctcagacgccctctagaagggctcctgaggcctatgcgc 20763901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 2264665 - 2264702
Alignment:
Q  252 ccctctagaaagacttaggcgccctccagaagggctct 289  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  2264665 ccctctaaaaagactcaggcgccctccagaagggctct 2264702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 507
Target Start/End: Original strand, 11117637 - 11117706
Alignment:
Q  438 gatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagtacat 507  Q
    |||||||||||||||||||   |||||| | ||||||||| ||  |||||| |||||||| |||||||||    
T  11117637 gatcattctcaaggcatcatttaaatagactaaaccctagtttcaaatattatactcactgcaagtacat 11117706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 3e-56; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 219 - 506
Target Start/End: Original strand, 34240686 - 34240973
Alignment:
Q  219 tggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaaggca 318  Q
    ||||| |||||||||||||||||| | |  ||||||||| ||||| |||||| ||||||||||||||||| |||| || | |||| | || ||| |||      
T  34240686 tggactgtcaatatattcctaagggcctaaaagccctctggaaaggcttaggtgccctccagaagggctcctgagtcccaggcgcgcccttccagaggtg 34240785  T
Q  319 ccgccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaaggg 418  Q
    |||||||| ||||   | ||||||||||||| |  ||||||| ||| ||| |||||| ||| |||||  |||| ||| |  |||||||||||||||||||    
T  34240786 ccgccttagccagtgtctagaagcatctagaaccgggtaaaaagacctaaagcccagattggttggggcttaagtcacgtggaaacaagcccacaaaggg 34240885  T
Q  419 ctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagtaca 506  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| |||| |||||||||||| || ||||||||||||| ||||||||    
T  34240886 ctataaatacccctcttgggatcattctcaaggcatcacacaaacagtctaaaccctagattctattattgtactcactgcaagtaca 34240973  T

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Target: chr8; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 219 - 506
Target Start/End: Complemental strand, 30997220 - 30996938
Alignment:
Q  219 tggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaaggca 318  Q
    |||||||| ||||||||||||||| |  | | ||||||||||||| ||| |||||||||||||||||||| ||||  ||| | || | || ||| ||||     
T  30997220 tggaccgttaatatattcctaagggctcgaatgccctctagaaaggctttggcgccctccagaagggctcatgagatctaggtgcgcccttccagaggcg 30997121  T
Q  319 ccgcct-taaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagg 417  Q
    |||||| ||   |||| | ||||||||||||| ||| |||||| |||||||| ||||||      |||  |||| ||| |   ||||||||| |  ||||    
T  30997120 ccgcctctattaagcttctagaagcatctagagcttagtaaaaagacttaagacccagc------ggggcttaagtcacgtaaaaacaagccaatgaagg 30997027  T
Q  418 gctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagtaca 506  Q
    ||||||||||||||||||  |||||||||||| |||||||||||| |  | ||||||||| || |||||||||||| ||| ||||||||    
T  30997026 gctataaatacccctctttagatcattctcaaagcatcacaaaaacaaactaaaccctagtttctaatattgtacttactgcaagtaca 30996938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 319 - 497
Target Start/End: Original strand, 17465980 - 17466159
Alignment:
Q  319 ccgccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaaggg 418  Q
    |||||||| ||||||   ||||||||||||| || ||||||| ||| ||| ||||||||||||||||  |||| ||| |||||||||||||||||||  |    
T  17465980 ccgccttagccagcttatagaagcatctagaactgggtaaaaagacctaaagcccagcttgcttggggcttaagtcacgctgaaacaagcccacaaaaag 17466079  T
Q  419 ctat-aaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcact 497  Q
     ||| ||||| |||||||  |||||||| ||| |||| ||| ||| || | |||| |||| || ||||||||||||||||    
T  17466080 ttataaaatatccctcttgagatcattcccaaagcatgacataaaaagactaaactctagtttctaatattgtactcact 17466159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 337 - 506
Target Start/End: Original strand, 24115260 - 24115429
Alignment:
Q  337 agaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacccctctta 436  Q
    ||||||||||||| ||| |||| | |||||||| |||||||| |||  |  |||| ||| |   ||||||| ||| | |||||||||||||| |||||||    
T  24115260 agaagcatctagagcttagtaataagacttaagacccagcttacttaaggcttaagtcacgagaaaacaagaccatagagggctataaatacacctctta 24115359  T
Q  437 ggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagtaca 506  Q
     || |||| |||||||||| || ||| |||| |||||||||||| || ||||||||||||| ||||||||    
T  24115360 agagcattatcaaggcatctcataaacagtctaaaccctagattctactattgtactcactgcaagtaca 24115429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 401 - 506
Target Start/End: Original strand, 24118962 - 24119067
Alignment:
Q  401 aaacaagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactaca 500  Q
    ||||||||||| | |||||||||||||| ||||||  || ||||||||||||||| || |||||||| |||||||||||| || ||||| ||||||| ||    
T  24118962 aaacaagcccatagagggctataaatacacctcttgagagcattctcaaggcatctcataaatagtctaaaccctagattctactattgcactcactgca 24119061  T
Q  501 agtaca 506  Q
    ||||||    
T  24119062 agtaca 24119067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 38667751 - 38667833
Alignment:
Q  215 gttgtggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcct 297  Q
    ||||||||||||| ||||||||||||||    | | ||||||||||||| |||| ||||||||||||||||||| ||||||||    
T  38667751 gttgtggaccgtccatatattcctaagggttcgaatgccctctagaaaggcttatgcgccctccagaagggctcatgaggcct 38667833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 521 - 560
Target Start/End: Original strand, 26513095 - 26513134
Alignment:
Q  521 atagcttctaatcataacattatagaaaacaacatttcta 560  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26513095 atagcttctaatcataacattatagaaaacaacatttcta 26513134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 20991298 - 20991347
Alignment:
Q  214 agttgtggaccgtcaatatattcctaaggacatgcaagccctctagaaag 263  Q
    ||||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  20991298 agttgtggaccgttaatatattccaaagggcatgcaagccctctagaaag 20991347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 407 - 504
Target Start/End: Complemental strand, 44134179 - 44134082
Alignment:
Q  407 gcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagta 504  Q
    |||||||||| |||||||||||| || ||  |||||||||| |||||| | | ||||| || ||| |||| ||| || ||||||||||||| ||||||    
T  44134179 gcccacaaagagctataaataccactattgagatcattctctaggcattatataaataatctaaatcctaaattctattattgtactcactgcaagta 44134082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 44134362 - 44134289
Alignment:
Q  220 ggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgag 293  Q
    |||||||||||||||||||||||   |  |||| ||||||||||  ||||| ||||||||||||||||| ||||    
T  44134362 ggaccgtcaatatattcctaagggtctaaaagcactctagaaaggtttaggtgccctccagaagggctcctgag 44134289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 219 - 303
Target Start/End: Original strand, 15568471 - 15568555
Alignment:
Q  219 tggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgc 303  Q
    |||||||||||||||||  |||||   || ||||| | ||||||| || |||||| |||||||||||||| ||||| ||||||||    
T  15568471 tggaccgtcaatatatttttaagggtctgaaagccttttagaaaggctaaggcgctctccagaagggctcctgaggactaagcgc 15568555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 450
Target Start/End: Original strand, 17919520 - 17919569
Alignment:
Q  401 aaacaagcccacaaagggctataaatacccctcttaggatcattctcaag 450  Q
    |||||||| ||| || |||||||||||||||||||  |||||||||||||    
T  17919520 aaacaagctcacgaatggctataaatacccctcttcagatcattctcaag 17919569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 417 - 497
Target Start/End: Original strand, 10648891 - 10648971
Alignment:
Q  417 ggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcact 497  Q
    |||||||||||||||| ||  || |||||||| ||||| || |||| || | ||||||||| || ||||||| ||||||||    
T  10648891 ggctataaataccccttttcagagcattctcagggcatgaccaaaacagactaaaccctagtttctaatattttactcact 10648971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 406 - 454
Target Start/End: Original strand, 20991554 - 20991602
Alignment:
Q  406 agcccacaaagggctataaatacccctcttaggatcattctcaaggcat 454  Q
    |||| ||||||| ||||||||||| ||||| | ||||||||||||||||    
T  20991554 agcctacaaaggactataaataccactcttggtatcattctcaaggcat 20991602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 6e-51; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 219 - 493
Target Start/End: Complemental strand, 28699919 - 28699647
Alignment:
Q  219 tggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaaggca 318  Q
    |||||||||||||||||||||||| |  | | ||||||||||||| |||||||||||||||||||||||| ||||||||| |||| | || ||| ||||     
T  28699919 tggaccgtcaatatattcctaagggctcgaatgccctctagaaaggcttaggcgccctccagaagggctcctgaggcctaggcgcgccctcccagaggcg 28699820  T
Q  319 ccgccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaaggg 418  Q
    || ||| | | |||| | ||||||||||||| ||| ||||||  |||||||| |||||||||||| |  |||| ||| ||  |||||||| |||||||||    
T  28699819 ccacctcatctagcttctagaagcatctagagcttagtaaaaatacttaagg-ccagcttgcttgtggcttaagtcacgcgaaaacaagcacacaaaggg 28699721  T
Q  419 ctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtact 493  Q
    |||||||||||||||||  ||||||||||||||||| || |||| || | ||||||||| || ||||||||||||    
T  28699720 ctataaatacccctcttgagatcattctcaaggcatgac-aaaacaggctaaaccctagtttttaatattgtact 28699647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 251 - 506
Target Start/End: Complemental strand, 37185579 - 37185325
Alignment:
Q  251 gccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaaggcaccgccttaaccagctcccagaagcatctagac 350  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||| |||| | || ||  |||| |||||| ||| |||| | ||||| |||||||     
T  37185579 gccctctagaaaggcttaggcgccctccagaagggctcctgaggcctaggcgcgc-cttcctgaggcgccgcctcaactagcttctagaagtatctagag 37185481  T
Q  351 cttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacccctcttaggatcattctcaag 450  Q
    ||| |||||| |||||||  |||||||||||||||  |||| ||| |   |||||||||   ||||||||||||||||||||||| |||||||||||||     
T  37185480 cttagtaaaaagacttaaaacccagcttgcttggggcttaagtcacgtaaaaacaagccttgaaagggctataaatacccctcttgggatcattctcaaa 37185381  T
Q  451 gcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagtaca 506  Q
    ||||| || ||| |||  |||||||||||| || ||||||| ||||| ||| ||||    
T  37185380 gcatctcataaacagtttaaaccctagattctattattgtattcactgcaaataca 37185325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 219 - 506
Target Start/End: Complemental strand, 44900355 - 44900068
Alignment:
Q  219 tggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaaggca 318  Q
    ||||| ||||||||||||| ||||||  | | ||||||||||||| |||||||| | |  ||| | |||| | ||||||| |||  | ||  || ||||     
T  44900355 tggactgtcaatatattccaaaggactcgaatgccctctagaaaggcttaggcgtcttttagaggtgctccttaggcctaggcgtgcccttacagaggcg 44900256  T
Q  319 ccgccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaaggg 418  Q
    |||||| ||  |||| | ||||||||||||| | | |||||||||||||||||| ||||||||||||| |||| |||  |  ||||||||||| ||||||    
T  44900255 ccgcctcaattagcttctagaagcatctagagcatagtaaaatgacttaaggccaagcttgcttgggacttaagtcacacgaaaacaagcccataaaggg 44900156  T
Q  419 ctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagtaca 506  Q
     |||||||||||||||| |||||||||||||||||||||  ||| |  | |||| |||| || |||||||||||| | | ||||||||    
T  44900155 ttataaatacccctcttgggatcattctcaaggcatcacttaaacaaactaaactctagtttctaatattgtacttaatgcaagtaca 44900068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 219 - 476
Target Start/End: Complemental strand, 19937728 - 19937471
Alignment:
Q  219 tggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaaggca 318  Q
    |||||||| |||||||||| |||| |  | |  |||| ||||||| |||  |||||||| |||||||||| |  ||| || |||| | || ||| ||||     
T  19937728 tggaccgttaatatattcccaagggctcgaataccctatagaaaggcttgagcgccctctagaagggctcctacggcataggcgcgcccttccagaggcg 19937629  T
Q  319 ccgccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaaggg 418  Q
    |||||| ||| |||| | ||||||||||| | ||| ||||||| |  ||||||||| ||||||||||  |||| |||  |  ||||||||||||||||||    
T  19937628 ccgcctcaactagcttctagaagcatctacaacttagtaaaattaagtaaggcccaacttgcttggggcttaagtcacacgaaaacaagcccacaaaggg 19937529  T
Q  419 ctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaacccta 476  Q
    ||||||||| ||||||| ||||||||| |||||||||||| ||| |||| ||||||||    
T  19937528 ctataaataaccctcttgggatcattcccaaggcatcacataaacagtctaaacccta 19937471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 215 - 476
Target Start/End: Original strand, 31753014 - 31753274
Alignment:
Q  215 gttgtggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaa 314  Q
    |||||| ||||||||||||||||||| | |  | | ||||||||||||| || ||| |||||||| ||||||||   ||||||| |||| | || | | |    
T  31753014 gttgtgcaccgtcaatatattcctaaaggctcgaatgccctctagaaaggctaaggagccctccataagggctcacaaggcctaggcgcgccct-ctaga 31753112  T
Q  315 ggcaccgccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaa 414  Q
    |||  ||||||||| | || | ||||||||| ||| ||| |||||| ||||||||||||| ||| ||||||  |||| ||| |    |||||||||||||    
T  31753113 ggcgtcgccttaactaacttcaagaagcatccagagcttagtaaaaagacttaaggcccatctttcttggggcttaagtcatgaaagaacaagcccacaa 31753212  T
Q  415 agggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaacccta 476  Q
    ||||| ||||||| ||||||| ||||||||||||| ||||| || ||| |||| ||||||||    
T  31753213 agggccataaatatccctcttgggatcattctcaaagcatctcataaacagtctaaacccta 31753274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 218 - 491
Target Start/End: Complemental strand, 13516153 - 13515880
Alignment:
Q  218 gtggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaaggc 317  Q
    |||||||||| |||||||||||||  |  | | ||| | ||||||| |||||||| ||||||||||||||| ||||||||| | |  | ||  || ||||    
T  13516153 gtggaccgtcgatatattcctaagagctcgaatgccatatagaaaggcttaggcgtcctccagaagggctcatgaggcctaggtgtgccctttcagaggc 13516054  T
Q  318 accgccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagg 417  Q
     ||| || ||| |  | | | ||||||||||| ||| |||||| ||||||| ||||| ||| ||||||  |||| ||| |   |||||| |||||||||     
T  13516053 gccgtctcaactaatttctaaaagcatctagagcttagtaaaaagacttaaagcccaactttcttggggcttaagtcaggtaaaaacaatcccacaaaga 13515954  T
Q  418 gctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgta 491  Q
    ||||||||||||||||||  |||||||||||||   |||  |||| |||| ||||| |||||| ||||||||||    
T  13515953 gctataaatacccctcttgagatcattctcaagatgtcatgaaaacagtctaaaccttagattctaatattgta 13515880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 221 - 481
Target Start/End: Original strand, 10291580 - 10291841
Alignment:
Q  221 gaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaaggcacc 320  Q
    |||||||||||||||||||||| | |  || |||||||||||  || |||| ||||| |||||||||||||| |||||  | | | || ||   |||  |    
T  10291580 gaccgtcaatatattcctaagggcctaaaaaccctctagaaatgctcaggcaccctctagaagggctcttgaagcctagacacgcccttcctggggcgtc 10291679  T
Q  321 gccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaa-gggc 419  Q
    |||||| ||| || |  |||||||| ||| |   |||||| ||||||| ||||||||||||| ||  |||| ||  ||| ||||||| ||||||| ||||    
T  10291680 gccttagccaacttctggaagcatccagaaccgagtaaaaagacttaaagcccagcttgcttagggcttaagtcgcgctaaaacaagtccacaaaagggc 10291779  T
Q  420 tataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagatta 481  Q
     ||||||||| ||||| ||||||||||| |||||||  | ||| |||| |||||||||||||    
T  10291780 cataaataccactcttgggatcattctcgaggcatctgataaacagtctaaaccctagatta 10291841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 217 - 385
Target Start/End: Original strand, 2548390 - 2548558
Alignment:
Q  217 tgtggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaagg 316  Q
    |||||||| ||| ||||||||||||| |    | ||| ||||||||| || | ||||||||||||| ||||| ||||||||| | || | || ||| |||    
T  2548390 tgtggaccatcagtatattcctaagggctcaaatgccttctagaaaggctcaagcgccctccagaacggctcctgaggcctaggtgcgcccttccagagg 2548489  T
Q  317 caccgccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttggg 385  Q
    | |||||| |||  ||| | ||||||||||||| ||| |||||| ||| ||||||||||||||||||||    
T  2548490 cgccgcctcaacttgcttctagaagcatctagagcttagtaaaaagacataaggcccagcttgcttggg 2548558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 322 - 506
Target Start/End: Complemental strand, 32315961 - 32315778
Alignment:
Q  322 ccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggcta 421  Q
    ||||| |||||| |||||||||||||||     |||||| ||| ||| | ||||||||||||||   |||  || ||| |||||||||||||||||||||    
T  32315961 ccttagccagcttccagaagcatctagaatcaagtaaaaagacctaaagtccagcttgcttggggcctaagccacgctaaaacaagcccacaaagggcta 32315862  T
Q  422 taaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagtaca 506  Q
    |||||||  | ||| ||| |||||||||||||||| || || ||||  ||||||||||   | ||||||||||||| ||||||||    
T  32315861 taaatacgacccttgggaccattctcaaggcatcaaaacaacagtc-taaccctagatacgattattgtactcactgcaagtaca 32315778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 355 - 506
Target Start/End: Original strand, 44898921 - 44899070
Alignment:
Q  355 gtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacccctcttaggatcattctcaaggcat 454  Q
    |||||||||||||||||||| |||| |||||  |||| | | ||  ||||||||||| |||||||||  | |||||||||| ||||||||||||||||||    
T  44898921 gtaaaatgacttaaggcccaacttgtttggggcttaagtaacgcgaaaacaagcccataaagggcta--agtacccctcttgggatcattctcaaggcat 44899018  T
Q  455 cacaaaaatagtcaaaaccctagattataatattgtactcactacaagtaca 506  Q
    |||  ||| |  | ||||| ||| || |||||||||||  ||||||||||||    
T  44899019 cacttaaacaaactaaaccgtagtttctaatattgtacctactacaagtaca 44899070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 403 - 507
Target Start/End: Original strand, 12495073 - 12495177
Alignment:
Q  403 acaagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaag 502  Q
    |||||||||  |||||| |||||||||||||||  ||||||||||||||| |||| |||| || | ||| ||||| || |||||||| ||||||| ||||    
T  12495073 acaagcccaagaagggcgataaatacccctcttgagatcattctcaaggcttcacgaaaacagactaaatcctagtttctaatattgcactcactgcaag 12495172  T
Q  503 tacat 507  Q
    |||||    
T  12495173 tacat 12495177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 401 - 496
Target Start/End: Complemental strand, 13312375 - 13312281
Alignment:
Q  401 aaacaagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcac 496  Q
    |||||||| |||||| |||||||||||||||| || |||||||||||||| || |||||||| || | ||| ||||| || |||||||||||||||    
T  13312375 aaacaagctcacaaacggctataaataccccttttgggatcattctcaagacaccacaaaaacagactaaa-cctagtttctaatattgtactcac 13312281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 488
Target Start/End: Complemental strand, 13305084 - 13304997
Alignment:
Q  401 aaacaagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatatt 488  Q
    |||||||||||||||||||||||||| ||  | || |||||||||||||| |||||||| || || | ||||||||| || |||||||    
T  13305084 aaacaagcccacaaagggctataaatgcctatattgggatcattctcaagacatcacaacaacagactaaaccctagtttctaatatt 13304997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 288
Target Start/End: Original strand, 29480133 - 29480204
Alignment:
Q  217 tgtggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctc 288  Q
    ||||||| || ||||||||||||||| | || ||| |||||| |||| || |||||| ||||||||||||||    
T  29480133 tgtggacagttaatatattcctaagggcctgaaagtcctctataaaggctcaggcgctctccagaagggctc 29480204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 357 - 435
Target Start/End: Complemental strand, 13794469 - 13794391
Alignment:
Q  357 aaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacccctctt 435  Q
    |||| ||||||| || |||||| ||||||  |||| ||| || ||||||||||| |||| || ||||||||||||||||    
T  13794469 aaaaagacttaaagcgcagcttccttggggcttaagtcacgcggaaacaagccctcaaaaggttataaatacccctctt 13794391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 17369327 - 17369401
Alignment:
Q  355 gtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacc 429  Q
    ||||||||||||||||||||  |||||||||| || | ||| |   |||||||| ||| ||||||||||||||||    
T  17369327 gtaaaatgacttaaggcccaagttgcttgggactttagtcatgagaaaacaagctcacgaagggctataaatacc 17369401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 26383864 - 26383909
Alignment:
Q  249 aagccctctagaaagacttaggcgccctccagaagggctcttgagg 294  Q
    ||||||||||||| | ||||| ||||||||||||||||| ||||||    
T  26383864 aagccctctagaagggcttagacgccctccagaagggctattgagg 26383909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 403 - 506
Target Start/End: Complemental strand, 31275074 - 31274970
Alignment:
Q  403 acaagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaat-agtcaaaaccctagattataatattgtactcactacaa 501  Q
    |||||||||  || ||||||||||||||   ||| || |||||||||||||| ||| |||| | || ||||||||| ||   |||||||||||||| |||    
T  31275074 acaagcccaagaaaggctataaataccctcgttaagagcattctcaaggcatgacataaataattctaaaccctagttttagatattgtactcactgcaa 31274975  T
Q  502 gtaca 506  Q
    |||||    
T  31274974 gtaca 31274970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 4e-46; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 217 - 494
Target Start/End: Original strand, 32889511 - 32889789
Alignment:
Q  217 tgtggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaagg 316  Q
    |||||| |||||||||||| |||||  | || |||| |||||||||| ||||| || ||||||||||||||| || |   || ||||   || ||| |||    
T  32889511 tgtggagcgtcaatatatttctaagagcctgaaagctctctagaaaggcttagacgtcctccagaagggctcatgggatttaggcgcgtccttccagagg 32889610  T
Q  317 caccgccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaag 416  Q
    | ||||||||||||||| | ||||||||||||| ||||||||||||||||||| |||||||| ||| |   |||| | | ||  |||||||| |||||||    
T  32889611 cgccgccttaaccagcttctagaagcatctagagcttggtaaaatgacttaagacccagctttctttgagcttaagttacgcaaaaacaagctcacaaag 32889710  T
Q  417 ggctataaatacccctctt-aggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactc 494  Q
    ||||||||||||||||||| |||||||||||||||||||| || ||| |||| |||||||| ||| || ||||||||||    
T  32889711 ggctataaatacccctctttaggatcattctcaaggcatcgcataaacagtctaaaccctatattctattattgtactc 32889789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 356 - 507
Target Start/End: Original strand, 7434623 - 7434774
Alignment:
Q  356 taaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacccctcttaggatcattctcaaggcatc 455  Q
    ||||| ||| ||| ||||||||||||||||  |||| ||| |||||| ||||| ||||||| |||||||||||| ||||| |||||||||||||||||||    
T  7434623 taaaaagacctaaagcccagcttgcttggggcttaagtcacgctgaagcaagctcacaaagtgctataaatacctctcttgggatcattctcaaggcatc 7434722  T
Q  456 acaaaaatagtcaaaaccctagattataatattgtactcactacaagtacat 507  Q
    ||| ||| ||||||||||||||||| || | ||||||||||||||| |||||    
T  7434723 acataaacagtcaaaaccctagattctattgttgtactcactacaattacat 7434774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 376 - 506
Target Start/End: Complemental strand, 16139843 - 16139713
Alignment:
Q  376 cttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccct 475  Q
    ||||||||||  |||| ||| ||| |||||| |||||||||||||||||||||| |  || ||||||||||||||||||| || | | |||| |||||||    
T  16139843 cttgcttggggcttaagtcacgctaaaacaatcccacaaagggctataaataccacgtttgggatcattctcaaggcatctcatagacagtctaaaccct 16139744  T
Q  476 agattataatattgtactcactacaagtaca 506  Q
    ||||| |||||||||||||||| ||| ||||    
T  16139743 agattctaatattgtactcactgcaaataca 16139713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 222 - 493
Target Start/End: Original strand, 19276332 - 19276605
Alignment:
Q  222 accgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaaggcaccg 321  Q
    |||| ||||||||||||||||   |  ||||||||||| |||  ||||||||||||||||||||||| |||||| || ||||   |    || | | |||    
T  19276332 accgacaatatattcctaagggactaaaagccctctaggaaggtttaggcgccctccagaagggctcatgaggcttaggcgcgtccccttaacgacgccg 19276431  T
Q  322 ccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaac--aagcccacaaagggc 419  Q
    ||| ||| | || | ||||||||||||| | |||||||| ||| ||| ||||| | || |||||  |||| | | ||| |||   ||||||| |||||||    
T  19276432 cctcaactaacttctagaagcatctagaacctggtaaaaagacctaaagcccaacatgtttggggcttaagttacgctaaaaacaaagcccagaaagggc 19276531  T
Q  420 tataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtact 493  Q
    |||||||||| |||||| ||||||||| |||||||| || ||| |||| |||||||||||| ||  ||||||||    
T  19276532 tataaataccactcttacgatcattctgaaggcatctcataaacagtctaaaccctagattctaccattgtact 19276605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 406 - 506
Target Start/End: Complemental strand, 7770563 - 7770462
Alignment:
Q  406 agcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtc-aaaaccctagattataatattgtactcactacaagta 504  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||||||| ||  ||  ||| ||||||||| |||||| ||||||||||||| ||||||    
T  7770563 agcccacaaaaggctataaataccactcttgggatcattctcaaggcatctcattaacggtctaaaaccctatattatattattgtactcactgcaagta 7770464  T
Q  505 ca 506  Q
    ||    
T  7770463 ca 7770462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 417 - 493
Target Start/End: Original strand, 806050 - 806126
Alignment:
Q  417 ggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtact 493  Q
    ||||||||||||| ||||||||| |||||||||||||||||| ||| |||| |||||||||||| || |||||||||    
T  806050 ggctataaataccactcttaggagcattctcaaggcatcacataaacagtctaaaccctagattctattattgtact 806126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 401 - 506
Target Start/End: Complemental strand, 16233820 - 16233714
Alignment:
Q  401 aaacaagcccacaaagggctataaatacccc-tcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactac 499  Q
    |||||||| |||||||||||||||||||||| |||||| ||||||||||| |||||||| ||| || | ||||| ||| || | |||||||||||| | |    
T  16233820 aaacaagctcacaaagggctataaataccccctcttagaatcattctcaatgcatcacataaacagactaaaccgtagtttcttatattgtactcagtgc 16233721  T
Q  500 aagtaca 506  Q
    |||||||    
T  16233720 aagtaca 16233714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 403 - 492
Target Start/End: Original strand, 30554155 - 30554244
Alignment:
Q  403 acaagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtac 492  Q
    |||||||||| ||||||||||||||||||||||  ||  ||||||||||||||||  ||| || | |||||||||||| || ||||||||    
T  30554155 acaagcccacgaagggctataaatacccctctttagagtattctcaaggcatcacctaaacagcctaaaccctagattctattattgtac 30554244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 355 - 457
Target Start/End: Original strand, 14753743 - 14753845
Alignment:
Q  355 gtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacccctcttaggatcattctcaaggcat 454  Q
    ||||||||||||||||||||  |||||||||  |||| ||| |   | |||||||||  ||||||||||||||||||||||  || ||||||||||| ||    
T  14753743 gtaaaatgacttaaggcccaaattgcttggggcttaagtcacggaaatacaagcccatgaagggctataaatacccctcttgagagcattctcaaggtat 14753842  T
Q  455 cac 457  Q
    |||    
T  14753843 cac 14753845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 506
Target Start/End: Original strand, 940576 - 940680
Alignment:
Q  401 aaacaagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactaca 500  Q
    ||||||||||||  | ||||||||||||||| |||  ||||||||||||| ||| || |||| || | ||||||||| ||  ||||||||||||||| ||    
T  940576 aaacaagcccacgcaaggctataaatacccc-cttgagatcattctcaagacatgaccaaaagagactaaaccctagtttcaaatattgtactcactgca 940674  T
Q  501 agtaca 506  Q
    ||||||    
T  940675 agtaca 940680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 26970746 - 26970867
Alignment:
Q  10 ggagcagagattcctgacatgtacataccgaggaaatagttcctcgaaattacgtctatttaa-cgagaaacaatggtttctcggaattttttggtcgga 108  Q
    ||||||||||||||||||| || ||||| |||||||| |||||| ||||  || | ||||| | | |||||||| | || |||| ||||| |||||||||    
T  26970746 ggagcagagattcctgacacgtgcatac-gaggaaattgttccttgaaaa-acctttattttagcaagaaacaaagtttcctcgaaatttgttggtcgga 26970843  T
Q  109 attgccttcgtttcttgtagtgat 132  Q
    ||| ||||| ||||||||||||||    
T  26970844 attaccttcatttcttgtagtgat 26970867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 506
Target Start/End: Original strand, 28426323 - 28426610
Alignment:
Q  217 tgtggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaagg 316  Q
    |||||| ||| ||||||||| ||||| |  | | ||||||||||||| || ||||| ||||||||||||||||| |||| ||  ||  |||| ||  |||    
T  28426323 tgtggatcgtaaatatattcttaagggctcgaatgccctctagaaaggctaaggcgtcctccagaagggctcttaaggcttagacgtgctctccc--agg 28426420  T
Q  317 caccgccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaag 416  Q
    | |||||| ||| | || | ||||||||||||| ||  |||||| ||||||| |||||  || ||||||  |||| ||  |   || |||||||||| |     
T  28426421 cgccgcctcaactaacttctagaagcatctagaactcagtaaaaagacttaaagcccacattacttgggttttaagtctcgggaaaccaagcccacagat 28426520  T
Q  417 ggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagtaca 506  Q
    | || ||||||| ||||||  || || ||||||| |||| || ||| |||| |||||||| ||| || |||| |||||||  ||||||||    
T  28426521 gactgtaaatacacctcttgagagcactctcaagacatctcataaacagtctaaaccctaaattctattattatactcaccgcaagtaca 28426610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 479
Target Start/End: Complemental strand, 14259619 - 14259557
Alignment:
Q  417 ggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagat 479  Q
    |||||||||||||   ||| |||| ||||| |||||||| ||||||||||| |||||||||||    
T  14259619 ggctataaataccatccttgggataattcttaaggcatctcaaaaatagtctaaaccctagat 14259557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 355 - 493
Target Start/End: Complemental strand, 30610581 - 30610443
Alignment:
Q  355 gtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacccctcttaggatcattctcaaggcat 454  Q
    |||||| |||||| | | |||||||||||||| |||| ||| ||  ||| ||| |||||||  ||||||||||||  |||||  |||||| ||||| |||    
T  30610581 gtaaaaagacttatgcctcagcttgcttgggacttaagtcacgcgaaaataagtccacaaaaagctataaatacctttcttaatatcattttcaagacat 30610482  T
Q  455 cacaaaaatagtcaaaaccctagattataatattgtact 493  Q
    ||| |||| |  | ||||||||| || ||||||| ||||    
T  30610481 cacgaaaacaaactaaaccctagtttttaatattatact 30610443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 417 - 493
Target Start/End: Original strand, 809502 - 809578
Alignment:
Q  417 ggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtact 493  Q
    ||||||||||||| || || ||| |||||| ||||||||||| ||  | || |||||||||||| || |||||||||    
T  809502 ggctataaataccacttttgggagcattctgaaggcatcacataaccaatctaaaccctagattctattattgtact 809578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 2e-44; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 219 - 506
Target Start/End: Original strand, 25935081 - 25935368
Alignment:
Q  219 tggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaaggca 318  Q
    |||||||||||||||||||||||| | |  ||||||||||||||| | |||||||||| |||||||||||  || ||||| |||| |  | ||| ||||     
T  25935081 tggaccgtcaatatattcctaagggcctaaaagccctctagaaaggcataggcgcccttcagaagggctcaagaagcctaggcgcgccattccagaggcg 25935180  T
Q  319 ccgccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaaggg 418  Q
    ||||||||| ||||| | ||||||||||||| |   |||||| ||| ||| || ||||||||||| |  |||| ||| ||| |||||| ||||||||||     
T  25935181 ccgccttaatcagcttctagaagcatctagaaccacgtaaaaagacctaaagctcagcttgcttgaggcttaagtcacgctaaaacaaacccacaaagga 25935280  T
Q  419 ctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagtaca 506  Q
    |||||||| || |||| ||||||||||||||| |||| || |||  ||| |||||||||||| || ||||||||||| | ||||||||    
T  25935281 ctataaattccactctcaggatcattctcaagtcatctcataaacggtctaaaccctagattctattattgtactcattgcaagtaca 25935368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 372 - 504
Target Start/End: Original strand, 13857844 - 13857976
Alignment:
Q  372 ccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaa 471  Q
    ||||||||||||||  |||| ||| ||| | ||||||||||||||||||||||||||| | ||||||||||||||||| ||||| |||||| |||| |||    
T  13857844 ccagcttgcttggggcttaagtcacgctaacacaagcccacaaagggctataaataccacccttaggatcattctcaaagcatctcaaaaacagtctaaa 13857943  T
Q  472 ccctagattataatattgtactcactacaagta 504  Q
    ||||||||| || ||||||||||||| ||||||    
T  13857944 ccctagattttattattgtactcactgcaagta 13857976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 372 - 496
Target Start/End: Original strand, 13869374 - 13869498
Alignment:
Q  372 ccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaa 471  Q
    ||||||||||||||  |||| ||| | | | ||||||||||||||||||||||||||| | ||||||||||||||||| ||||| || ||| |||| |||    
T  13869374 ccagcttgcttggggcttaagtcacgttaacacaagcccacaaagggctataaataccacccttaggatcattctcaaagcatctcataaacagtctaaa 13869473  T
Q  472 ccctagattataatattgtactcac 496  Q
    ||||| ||| || ||||||||||||    
T  13869474 ccctaaattttattattgtactcac 13869498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 217 - 497
Target Start/End: Complemental strand, 34050461 - 34050182
Alignment:
Q  217 tgtggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaagg 316  Q
    |||||||||||||||||||||| ||| | ||   ||| |||||||||  | ||||||||| || ||||||||||||||||    ||||  || | | | |    
T  34050461 tgtggaccgtcaatatattccttagggcttgactgccatctagaaaggttcaggcgcccttcaaaagggctcttgaggccaggacgcatcctccaagatg 34050362  T
Q  317 caccgccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaag 416  Q
    | |||||| ||| || | | |||||||||| ||  || |||||||| |||||| |||| ||||||||||  |||| ||| ||  |||||||| |||||||    
T  34050361 cgccgcctcaactaggttctagaagcatctggagtttagtaaaatgtcttaagacccatcttgcttggggcttaagtcacgcaaaaacaagctcacaaag 34050262  T
Q  417 ggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcact 497  Q
    | ||||||||||| | |||  |||||||||||| |||| ||| ||| |||| ||||||||| || | ||||||||||||||    
T  34050261 gactataaatacctcgcttgagatcattctcaaagcattacataaacagtctaaaccctagtttct-atattgtactcact 34050182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 407 - 504
Target Start/End: Complemental strand, 50051237 - 50051140
Alignment:
Q  407 gcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagta 504  Q
    ||||||||||| ||||||||||| |||||  |||||||||| |||||| | | |||||||| |||||||||||| || |||||||||| || ||||||    
T  50051237 gcccacaaaggactataaataccactcttgagatcattctctaggcattatataaatagtctaaaccctagattctattattgtactcgctgcaagta 50051140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 217 - 429
Target Start/End: Complemental strand, 36539652 - 36539441
Alignment:
Q  217 tgtggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaagg 316  Q
    ||||||| |||||||||||||||||| | |  || |||||||||||| | |||||||||||| ||||||||| ||  ||||| |||| | || ||| |||    
T  36539652 tgtggactgtcaatatattcctaagggcctaaaatccctctagaaaggcgtaggcgccctcccgaagggctcctggagcctaggcgcgcccttccagagg 36539553  T
Q  317 caccgccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaag 416  Q
    | || ||||| |  ||| | ||||||||||||| |    | ||| ||| ||| ||||| ||||||||||  |||| ||| ||| |||||||| || |||     
T  36539552 cgccaccttagcatgcttctagaagcatctagaaccgaattaaaagacctaaagcccaacttgcttggggtttaagtcatgct-aaacaagctcataaaa 36539454  T
Q  417 ggctataaatacc 429  Q
    |||||||||||||    
T  36539453 ggctataaatacc 36539441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 227 - 427
Target Start/End: Complemental strand, 36544120 - 36543920
Alignment:
Q  227 caatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaaggcaccgcctta 326  Q
    |||| ||||||||||||| |  ||  ||||||||||| ||||||||||||  |||||||||| |||  |||||| || | || | | |||| ||  ||||    
T  36544120 caatctattcctaaggacttaaaattcctctagaaaggcttaggcgccctttagaagggctcctgaaacctaagtgcgcccttctagaggcgccatctta 36544021  T
Q  327 accagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaat 426  Q
     ||| || | ||||||||||||| |  | ||||| ||||||| ||||| ||||||||||  |||| ||| ||| |||||||| || ||| ||||||||||    
T  36544020 gccaacttctagaagcatctagaaccggataaaaagacttaacgcccaacttgcttgggccttaagtcacgctaaaacaagctcataaaaggctataaat 36543921  T
Q  427 a 427  Q
    |    
T  36543920 a 36543920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 506
Target Start/End: Original strand, 12194816 - 12194967
Alignment:
Q  355 gtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacccctcttaggatcattctcaaggcat 454  Q
    |||||| |||||||||| |||||| ||||||  ||||  || |   ||||||||||||| |||||||||||||| ||||||  || |||||| ||  |||    
T  12194816 gtaaaaagacttaaggcgcagcttacttggggcttaagccacgagaaaacaagcccacagagggctataaatacacctcttgagagcattctaaaaacat 12194915  T
Q  455 cacaaaaatagtcaaaaccctagattataatattgtactcactacaagtaca 506  Q
    | || ||| |||| |||||  ||||| || ||||||||||||| ||||||||    
T  12194916 ctcataaacagtctaaacctaagattctattattgtactcactgcaagtaca 12194967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 288
Target Start/End: Original strand, 49022584 - 49022655
Alignment:
Q  217 tgtggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctc 288  Q
    |||||||||||||||||||| ||||| | |  |||||||||||||||  ||| |||||||||||||||||||    
T  49022584 tgtggaccgtcaatatattcttaagggcctaaaagccctctagaaaggtttaagcgccctccagaagggctc 49022655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 355 - 506
Target Start/End: Complemental strand, 17397837 - 17397685
Alignment:
Q  355 gtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaa-acaagcccacaaagggctataaatacccctcttaggatcattctcaaggca 453  Q
    ||||||||||||||||||| | |||||||||  |||| ||| |   || ||||||||||||| ||||||||||| ||||||  ||| |||||| ||  ||    
T  17397837 gtaaaatgacttaaggccctggttgcttggggcttaagtcatgggaaacacaagcccacaaaaggctataaataaccctctcgggagcattctgaaatca 17397738  T
Q  454 tcacaaaaatagt-caaaaccctagattataatattgtactcactacaagtaca 506  Q
    ||||||||| ||| | |||||||||| | | |||||||||  ||||||||||||    
T  17397737 tcacaaaaacagtactaaaccctaga-tctgatattgtaccaactacaagtaca 17397685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 216 - 293
Target Start/End: Complemental strand, 50051386 - 50051309
Alignment:
Q  216 ttgtggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgag 293  Q
    ||||||||||||||||||||||||||| | |  || ||||||||||||  ||||| | ||||||||||||||| ||||    
T  50051386 ttgtggaccgtcaatatattcctaagggcctaaaatccctctagaaaggtttaggtgtcctccagaagggctcctgag 50051309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 507
Target Start/End: Complemental strand, 43854673 - 43854569
Alignment:
Q  403 acaagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaag 502  Q
    |||||| ||||| | ||||||||||||||||||| || |||||||||| ||||||   ||||| | ||||||||  || |||| ||||||||| | ||||    
T  43854673 acaagctcacaatgagctataaatacccctcttaagagcattctcaagacatcacctgaatagactaaaccctaatttctaattttgtactcattgcaag 43854574  T
Q  503 tacat 507  Q
    |||||    
T  43854573 tacat 43854569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 449
Target Start/End: Original strand, 1676810 - 1676856
Alignment:
Q  403 acaagcccacaaagggctataaatacccctcttaggatcattctcaa 449  Q
    |||||||||| ||||||||||||||||||||||| || |||||||||    
T  1676810 acaagcccacgaagggctataaatacccctcttaagagcattctcaa 1676856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 449
Target Start/End: Original strand, 1683338 - 1683384
Alignment:
Q  403 acaagcccacaaagggctataaatacccctcttaggatcattctcaa 449  Q
    |||||||||| ||||||||||||||||||||||| || |||||||||    
T  1683338 acaagcccacgaagggctataaatacccctcttaagagcattctcaa 1683384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 337 - 374
Target Start/End: Original strand, 49022688 - 49022725
Alignment:
Q  337 agaagcatctagaccttggtaaaatgacttaaggccca 374  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  49022688 agaagcatctagagcttggtaaaatgacttaaggccca 49022725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 403 - 493
Target Start/End: Complemental strand, 9157360 - 9157270
Alignment:
Q  403 acaagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtact 493  Q
    |||||||||||||| || ||||||| || ||||  || |||||||||| ||||||| ||| |||| ||||| |||||| || | |||||||    
T  9157360 acaagcccacaaagagcaataaatatccatcttgagagcattctcaagacatcacataaagagtctaaaccttagattctattgttgtact 9157270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 5e-36; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 255 - 508
Target Start/End: Original strand, 27649053 - 27649306
Alignment:
Q  255 tctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaaggcaccgccttaaccagctcccagaagcatctagaccttg 354  Q
    ||||||||| ||||||| || ||||||||||||| |||||| || |||| ||||  || ||||   |||||||| |||| | |||||||||| || ||||    
T  27649053 tctagaaaggcttaggcaccttccagaagggctcatgaggcttaggcgcgctctttcagaggcgttgccttaactagcttctagaagcatctggagcttg 27649152  T
Q  355 gtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacccctcttaggatcattctcaaggcat 454  Q
    |||||||||||||| | ||| ||||| |||   |||| ||| ||  ||||||||||||||||||||||||||||  || || |||||||||| |   |||    
T  27649153 gtaaaatgacttaatgtccaacttgcgtggagcttaagtcacgcgaaaacaagcccacaaagggctataaatacgacttttgggatcattctgagaacat 27649252  T
Q  455 cacaaaaatagtcaaaaccctagattataatattgtactcactacaagtacata 508  Q
    |||| ||| |||| |||||||||||| || ||||||| ||||| ||||||||||    
T  27649253 cacataaagagtctaaaccctagattctattattgtattcactgcaagtacata 27649306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 21926629 - 21926753
Alignment:
Q  6 aggaggagcagagattcctgacatgtacataccgaggaaatagttcctcgaaattacgtctatttaacgagaaacaatggtttctcggaattttttggtc 105  Q
    ||||| ||||||||||||||||||||   ||||||||||| |||| |||| |||||| |||||||| ||||||||||||||| |||||||||||||||||    
T  21926629 aggagcagcagagattcctgacatgtgtgtaccgaggaaaaagttgctcggaattacctctatttagcgagaaacaatggttcctcggaattttttggtc 21926728  T
Q  106 ggaattgccttcgtttcttgtagtg 130  Q
    |||||| | ||| ||||||||||||    
T  21926729 ggaattactttcatttcttgtagtg 21926753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 222 - 460
Target Start/End: Original strand, 16696005 - 16696242
Alignment:
Q  222 accgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaaggcaccg 321  Q
    |||||||||||||||||||||   |   |||||||||||||| |||||||||| ||||||||||||| ||| ||||| |||| | || ||| || | |||    
T  16696005 accgtcaatatattcctaagggtctaagagccctctagaaaggcttaggcgccttccagaagggctcctgaagcctaggcgcgcccttccagagacgccg 16696104  T
Q  322 ccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggcta 421  Q
    ||| | |||||| | |||| ||||||||     |||||| ||| ||| |||||||||||||||   |||| ||| ||| |||||||||||||| ||||||    
T  16696105 cctcagccagcttctagaaacatctagaatcaagtaaaaagacctaaagcccagcttgcttggagcttaagtcacgctaaaacaagcccacaaggggcta 16696204  T
Q  422 taaatacccctcttaggatcattctcaaggcatcacaaa 460  Q
    || ||||||| ||| ||||||||||||||| ||| ||||    
T  16696205 tagatacccc-cttgggatcattctcaaggtatctcaaa 16696242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 401 - 506
Target Start/End: Original strand, 29810220 - 29810331
Alignment:
Q  401 aaacaagcccacaaagggctataaatacccctctta------ggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactc 494  Q
    |||||||||||||||||||| ||||||||||||||       |||||||||||||| ||||||||||| |||| ||||||||  || |||||||||||||    
T  29810220 aaacaagcccacaaagggctttaaatacccctcttgatcttgggatcattctcaagacatcacaaaaacagtctaaaccctaatttctaatattgtactc 29810319  T
Q  495 actacaagtaca 506  Q
    ||| ||||||||    
T  29810320 actgcaagtaca 29810331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 337 - 504
Target Start/End: Original strand, 25918521 - 25918688
Alignment:
Q  337 agaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacccctctta 436  Q
    |||||||||||   |||| |||||||||||||||| || ||| |||| |  |||| ||| ||  ||||||| ||||||||| |||||||||  | ||||     
T  25918521 agaagcatctaatgcttgataaaatgacttaaggcacaacttacttgaggcttaagtcacgcgaaaacaagtccacaaaggactataaatattcatcttg 25918620  T
Q  437 ggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagta 504  Q
    |||||||||||||||||||||| ||| || | ||||  ||  ||||||||||||||||||| ||||||    
T  25918621 ggatcattctcaaggcatcacataaacagactaaactttactttataatattgtactcactgcaagta 25918688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 337 - 506
Target Start/End: Complemental strand, 26067222 - 26067053
Alignment:
Q  337 agaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacccctctta 436  Q
    ||||||||||||| |  | ||||| ||| ||| ||| |||||| |||||  |||| ||| ||  |||||||||||| | ||| |||||||||| | |||     
T  26067222 agaagcatctagaaccagataaaaagacctaaagcctagcttgtttggggcttaagtcacgcaaaaacaagcccaccatgggttataaataccacccttt 26067123  T
Q  437 ggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagtaca 506  Q
    |||||||| |||||| ||| || ||| |||| ||||| ||||||||| ||||||| ||||  ||||||||    
T  26067122 ggatcattatcaaggaatctcataaacagtctaaaccatagattatattattgtattcacagcaagtaca 26067053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 337 - 493
Target Start/End: Original strand, 20568252 - 20568406
Alignment:
Q  337 agaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacccctctta 436  Q
    ||||||||||||| ||| |||||| ||| ||||||||  ||||||||||  |||| ||| |   ||||||||||||||||||||||||||||| |  ||     
T  20568252 agaagcatctagagcttagtaaaaagacgtaaggcccgacttgcttgggccttaagtca-gtaaaaacaagcccacaaagggctataaataccaccattg 20568350  T
Q  437 ggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtact 493  Q
     ||||||||||||||  ||  ||||| | || ||| ||||||||||| |||||||||    
T  20568351 agatcattctcaaggtgtctgaaaaacaatctaaa-cctagattatattattgtact 20568406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 458
Target Start/End: Original strand, 37654209 - 37654261
Alignment:
Q  406 agcccacaaagggctataaatacccctcttaggatcattctcaaggcatcaca 458  Q
    |||||||||||||||||||||||| || ||| ||||||||| |||||||||||    
T  37654209 agcccacaaagggctataaataccactattaagatcattcttaaggcatcaca 37654261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 406 - 458
Target Start/End: Original strand, 37551379 - 37551431
Alignment:
Q  406 agcccacaaagggctataaatacccctcttaggatcattctcaaggcatcaca 458  Q
    |||||||||||||||||||||||| || ||  ||||||||| |||||||||||    
T  37551379 agcccacaaagggctataaataccactattgagatcattcttaaggcatcaca 37551431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 406 - 458
Target Start/End: Original strand, 37606866 - 37606918
Alignment:
Q  406 agcccacaaagggctataaatacccctcttaggatcattctcaaggcatcaca 458  Q
    |||||||||||| ||||||||||| || ||  |||||||||||||||||||||    
T  37606866 agcccacaaaggactataaataccactattgagatcattctcaaggcatcaca 37606918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 406 - 458
Target Start/End: Original strand, 37779076 - 37779128
Alignment:
Q  406 agcccacaaagggctataaatacccctcttaggatcattctcaaggcatcaca 458  Q
    |||||||||||| ||||||||||| || ||  |||||||||||||||||||||    
T  37779076 agcccacaaaggactataaataccactattgagatcattctcaaggcatcaca 37779128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 5e-30; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 215 - 506
Target Start/End: Complemental strand, 22224766 - 22224477
Alignment:
Q  215 gttgtggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaa 314  Q
    |||||||||||||||||||||||||||| |    |  |||||||||||| |||||||  |||||||||   ||||||||||||||| ||||  | ||| |    
T  22224766 gttgtggaccgtcaatatattcctaagggctcaaataccctctagaaaggcttaggcatcctccagaaaa-ctcttgaggcctaagagcaccattccaga 22224668  T
Q  315 ggcaccgccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaa 414  Q
    ||  ||| || ||| |||| | ||||||||||||| ||| |||||| ||||||||||||| |||||||||   |||| ||| |    | ||||| |||      
T  22224667 ggagccggctcaactagcttctagaagcatctagagcttagtaaaaagacttaaggcccaacttgcttggagcttaagtcacgagagagcaagctcacgg 22224568  T
Q  415 agggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagtaca 506  Q
    |||||||||||||| ||||||  || ||||||||||||||| |||||| ||| | ||||||||||| || ||||||||||||  ||||||||    
T  22224567 agggctataaatacacctcttgagagcattctcaaggcatctcaaaaacagt-ataaccctagattctattattgtactcaccgcaagtaca 22224477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 506
Target Start/End: Complemental strand, 14434246 - 14434142
Alignment:
Q  401 aaacaagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactaca 500  Q
    |||||||||||| ||| ||||||||||||| ||||| || |||||||||||||| || |||| |  | |||||| || |||  |||||||||||||| ||    
T  14434246 aaacaagcccacgaagagctataaatacccatcttaagagcattctcaaggcatgacgaaaacatactaaaccc-agtttaagatattgtactcactgca 14434148  T
Q  501 agtaca 506  Q
    ||||||    
T  14434147 agtaca 14434142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 404 - 509
Target Start/End: Original strand, 23353327 - 23353432
Alignment:
Q  404 caagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagt 503  Q
    ||||||||| || |||||||||||||||||||  ||||||||||| ||| | ||||||| |  | ||||||||| ||   |||||||| ||||| |||||    
T  23353327 caagcccacgaaaggctataaatacccctcttgagatcattctcagggcgtgacaaaaacatactaaaccctagtttcagatattgtattcactgcaagt 23353426  T
Q  504 acatat 509  Q
    ||||||    
T  23353427 acatat 23353432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 41101016 - 41100896
Alignment:
Q  10 ggagcagagattcctgacatgtacataccgaggaaatagttcctcgaaattacgtctatttaacgagaaacaatggtttctcggaattttttggtcggaa 109  Q
    ||||||||||||||||||| || |||||||||||||| |||||||| ||   | |   ||||  ||||||  | | || |||| ||||||||||||||||    
T  41101016 ggagcagagattcctgacacgtgcataccgaggaaattgttcctcggaaaatctttattttagtgagaaatcaagtttcctcgaaattttttggtcggaa 41100917  T
Q  110 ttgccttcgtttcttgtagtg 130  Q
    || ||||| ||||||||||||    
T  41100916 ttaccttcatttcttgtagtg 41100896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 417 - 506
Target Start/End: Complemental strand, 52909550 - 52909461
Alignment:
Q  417 ggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagtaca 506  Q
    |||||||||||||||||||  || |||||||||||||| ||  ||| || | ||||||||| ||   |||||||||||||| ||||||||    
T  52909550 ggctataaatacccctcttgagagcattctcaaggcatgacctaaacagactaaaccctagttttagatattgtactcactgcaagtaca 52909461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 217 - 298
Target Start/End: Complemental strand, 52909740 - 52909659
Alignment:
Q  217 tgtggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggccta 298  Q
    |||||||||||||| ||||||||| | ||   | |||||| |||||| ||||||||||||| |||||||||| ||| |||||    
T  52909740 tgtggaccgtcaatctattcctaaaggcacaaatgccctccagaaaggcttaggcgccctctagaagggctcctgaagccta 52909659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 429
Target Start/End: Complemental strand, 51183810 - 51183718
Alignment:
Q  337 agaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacc 429  Q
    |||||||||| || ||  |||||||||||||||||||| |||| |||||  |||| |||  |  |||||||||| |||||| |||||||||||    
T  51183810 agaagcatctggagctcagtaaaatgacttaaggcccaacttgtttggggcttaagtcacacaaaaacaagcccgcaaaggactataaatacc 51183718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 401 - 455
Target Start/End: Complemental strand, 19453955 - 19453901
Alignment:
Q  401 aaacaagcccacaaagggctataaatacccctcttaggatcattctcaaggcatc 455  Q
    ||||||||||||||  ||||||||||||| | ||| |||||| ||||||||||||    
T  19453955 aaacaagcccacaataggctataaataccacccttgggatcagtctcaaggcatc 19453901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 476
Target Start/End: Original strand, 23348066 - 23348139
Alignment:
Q  403 acaagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaacccta 476  Q
    |||||| ||| || |||||||||||||||||||  |||| |||||| ||||| ||||||| || | ||||||||    
T  23348066 acaagctcacgaaaggctataaatacccctcttgagatcgttctcagggcatgacaaaaacagactaaacccta 23348139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 3089078 - 3089126
Alignment:
Q  255 tctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgc 303  Q
    ||||||||| |||||||||||||| ||||||||| | ||||||| ||||    
T  3089078 tctagaaaggcttaggcgccctccggaagggctcctaaggcctaggcgc 3089126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 438 - 506
Target Start/End: Original strand, 11990925 - 11990992
Alignment:
Q  438 gatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagtaca 506  Q
    |||| ||||||||||||| |||||| | || || ||||||||||| |||||||||||||| ||| ||||    
T  11990925 gatcgttctcaaggcatctcaaaaacaatctaa-ccctagattattatattgtactcactgcaaataca 11990992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 4e-24; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 401 - 506
Target Start/End: Original strand, 18298926 - 18299031
Alignment:
Q  401 aaacaagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactaca 500  Q
    ||||||||||||||||||||||||||||| | ||||  || |||||||||||||| || |||||||| |||||||||||| || ||||||||||| | ||    
T  18298926 aaacaagcccacaaagggctataaataccacccttaaaattattctcaaggcatctcataaatagtctaaaccctagattctattattgtactcaatgca 18299025  T
Q  501 agtaca 506  Q
    ||||||    
T  18299026 agtaca 18299031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 218 - 294
Target Start/End: Complemental strand, 12257497 - 12257421
Alignment:
Q  218 gtggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgagg 294  Q
    ||||||||||||||||||| ||||| | || ||||||||||||||| || ||||||||||| |||||||||||||||    
T  12257497 gtggaccgtcaatatattcataagggcctgaaagccctctagaaaggctcaggcgccctccggaagggctcttgagg 12257421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 215 - 506
Target Start/End: Complemental strand, 2592025 - 2591736
Alignment:
Q  215 gttgtggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaa 314  Q
    ||||| |||||||||||||||||||||| |    |  |||||||||||| |||||||| |||||||||   ||| ||||||||| |||||| || | | |    
T  2592025 gttgtagaccgtcaatatattcctaagggctcaaataccctctagaaaggcttaggcgtcctccagaaaa-ctcctgaggcctaggcgcacccttctaga 2591927  T
Q  315 ggcaccgccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaa 414  Q
    |   |||||| ||| |||| | | ||||||||||| ||| |||||| |||||||||| || |||| ||||   |||| ||  |   |||||||  |||      
T  2591926 gatgccgcctcaactagcttctaaaagcatctagagcttagtaaaaagacttaaggcacaacttgtttggagcttaagtcctgagaaaacaagttcacgg 2591827  T
Q  415 agggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagtaca 506  Q
    ||||||||| |||| ||||||  || |||| |||||||||| |||||| ||  | ||||||||||| || ||||||||||||| ||||||||    
T  2591826 agggctatatatacacctcttgagagcattgtcaaggcatctcaaaaacaga-ataaccctagattctattattgtactcactgcaagtaca 2591736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 404 - 506
Target Start/End: Complemental strand, 17345914 - 17345811
Alignment:
Q  404 caagcccacaaag-ggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaag 502  Q
    ||||||||||||  ||||||||||| ||||||| ||||||||| ||||||||| || ||| |||| |||||||||||   | ||||||||||||| ||||    
T  17345914 caagcccacaaaaaggctataaatatccctcttgggatcattcccaaggcatctcataaacagtctaaaccctagatacaattattgtactcactgcaag 17345815  T
Q  503 taca 506  Q
    ||||    
T  17345814 taca 17345811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 506
Target Start/End: Complemental strand, 4157792 - 4157690
Alignment:
Q  404 caagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagt 503  Q
    |||||||||  |||||||||||||| ||||||  || |||||||||||||||||| ||| | || ||||| || ||| || ||||||||||||| |||||    
T  4157792 caagcccacggagggctataaatacacctcttgagagcattctcaaggcatcacataaacaatctaaaccttaaattctattattgtactcactgcaagt 4157693  T
Q  504 aca 506  Q
    |||    
T  4157692 aca 4157690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 404 - 504
Target Start/End: Original strand, 15583062 - 15583162
Alignment:
Q  404 caagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagt 503  Q
    |||||||||  ||| | |||||||| ||||||| ||  ||||||||| ||||||| ||| |||| ||| |||||||| |||||||||||||||| |||||    
T  15583062 caagcccacggaggacaataaatacacctcttaagagaattctcaagccatcacataaacagtctaaagcctagattctaatattgtactcactccaagt 15583161  T
Q  504 a 504  Q
    |    
T  15583162 a 15583162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 506
Target Start/End: Complemental strand, 10302188 - 10301900
Alignment:
Q  215 gttgtggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaa 314  Q
    |||||||| || |||||||||||||||| |    |  |||||||||||| |||||||| |||||||||   ||||||||||| | |||||| || | | |    
T  10302188 gttgtggatcgccaatatattcctaagggctcaaataccctctagaaaggcttaggcgtcctccagaaaa-ctcttgaggccgaggcgcacccttcgaga 10302090  T
Q  315 ggcaccgccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaa 414  Q
    ||   ||||| ||| | || | ||||||||||||| |||  |||||  |||| ||||||| |||||||||  ||||| ||| |   |||||| | |||      
T  10302089 ggagtcgcctcaactatcttctagaagcatctagagcttaataaaaatacttgaggcccaacttgcttggagattaagtcacgagaaaacaaactcacgg 10301990  T
Q  415 agggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtactcactacaagtaca 506  Q
    || ||||||||||| ||||||  || ||||||||||||||| |||||| ||| | ||||| | ||| || ||||||||||||| ||||||||    
T  10301989 agagctataaatacacctcttgagagcattctcaaggcatctcaaaaacagt-ataaccc-atattctattattgtactcactgcaagtaca 10301900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 362 - 451
Target Start/End: Original strand, 27809544 - 27809633
Alignment:
Q  362 gacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaagggctataaatacccctcttaggatcattctcaagg 451  Q
    ||||||||||||| ||| ||||||| |||| ||| ||  |||||||||||| ||||| |||||||| || ||||  ||||||||||||||    
T  27809544 gacttaaggcccaactttcttgggagttaagtcatgcgaaaacaagcccactaagggttataaatatccatcttgagatcattctcaagg 27809633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 18298777 - 18298856
Alignment:
Q  219 tggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggccta 298  Q
    |||||||||||||||||||||||  |  | | ||||||||||||  || ||||| ||||||||||||||| |||||||||    
T  18298777 tggaccgtcaatatattcctaagagctcgaatgccctctagaaaagctcaggcgtcctccagaagggctcctgaggccta 18298856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 219 - 435
Target Start/End: Original strand, 23738250 - 23738465
Alignment:
Q  219 tggaccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctcttgaggcctaagcgcactctaccaaaggca 318  Q
    ||||||||||||||||| |||||||| |  ||  | ||||||||| || || || ||||||||||||||  | ||||||| ||||  ||  ||| |||||    
T  23738250 tggaccgtcaatatatttctaaggacttaaaaatcttctagaaaggctcagacgtcctccagaagggcttctaaggcctatgcgc-gtcccccagaggca 23738348  T
Q  319 ccgccttaaccagctcccagaagcatctagaccttggtaaaatgacttaaggcccagcttgcttgggaattaaatcaagctgaaacaagcccacaaaggg 418  Q
    ||| |||| |||||| | | || |||||||| || ||| ||| ||   || ||| |||||||||| || |||| ||| |||  ||| |||||||||||||    
T  23738349 ccgtcttagccagcttctaaaaacatctagaactgggtgaaaagatccaaagcctagcttgcttgagacttaagtcacgctataaccagcccacaaaggg 23738448  T
Q  419 ctataaatacccctctt 435  Q
     | |||||||| |||||    
T  23738449 ttgtaaataccactctt 23738465  T

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Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 406 - 451
Target Start/End: Complemental strand, 12257316 - 12257270
Alignment:
Q  406 agcccacaaagg-gctataaatacccctcttaggatcattctcaagg 451  Q
    |||||||||||| |||||||||||| ||||| |||||||||||||||    
T  12257316 agcccacaaaggagctataaataccactcttgggatcattctcaagg 12257270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 507
Target Start/End: Original strand, 18310714 - 18310752
Alignment:
Q  469 aaaccctagattataatattgtactcactacaagtacat 507  Q
    |||||||||||| || |||||||||||||||||||||||    
T  18310714 aaaccctagattttattattgtactcactacaagtacat 18310752  T

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Target: scaffold0838 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 493
Target Start/End: Original strand, 2657 - 2733
Alignment:
Q  417 ggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtact 493  Q
    |||||||||||||||| ||| ||||||||||| ||||| |||||||||||   |||||||  || ||||||||||||    
T  2657 ggctataaataccccttttaagatcattctcacggcatgacaaaaatagtactaaccctaatttctaatattgtact 2733  T

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Target: scaffold0832 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 493
Target Start/End: Original strand, 2688 - 2764
Alignment:
Q  417 ggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtact 493  Q
    |||||||||||||||| ||| ||||||||||| ||||| |||||||||||   |||||||  || ||||||||||||    
T  2688 ggctataaataccccttttaagatcattctcacggcatgacaaaaatagtactaaccctaatttctaatattgtact 2764  T

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Target: scaffold0474 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 223 - 288
Target Start/End: Original strand, 6329 - 6394
Alignment:
Q  223 ccgtcaatatattcctaaggacatgcaagccctctagaaagacttaggcgccctccagaagggctc 288  Q
    |||||||| ||||||||||| || | |  ||||||||||| ||||||||||||| |||||||||||    
T  6329 ccgtcaatctattcctaagggcacgaattccctctagaaatacttaggcgcccttcagaagggctc 6394  T

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Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 414 - 455
Target Start/End: Original strand, 58790 - 58831
Alignment:
Q  414 aagggctataaatacccctcttaggatcattctcaaggcatc 455  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  58790 aagggctataaatacccctcttgggatcattctctaggcatc 58831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 401 - 493
Target Start/End: Original strand, 25412 - 25504
Alignment:
Q  401 aaacaagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattataatattgtact 493  Q
    |||||| ||||||||||| ||||||||||    ||||||||||| |||| ||||| || ||| |||| |||||||||||| |  |||||||||    
T  25412 aaacaaacccacaaagggttataaataccatcattaggatcattatcaaagcatctcataaacagtctaaaccctagattcttttattgtact 25504  T

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Target: scaffold0374 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 466
Target Start/End: Original strand, 12328 - 12393
Alignment:
Q  401 aaacaagcccacaaagggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagt 466  Q
    ||||||| ||||||||| ||||||||||| |||||| || || ||||||| ||| || ||||||||    
T  12328 aaacaagtccacaaaggactataaatacctctcttaagaacactctcaagacatgactaaaatagt 12393  T

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Target: scaffold0056 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 19094 - 19143
Alignment:
Q  249 aagccctctagaaagacttaggcgccctccagaagggctcttgaggccta 298  Q
    |||||||||||||||  | || |||||||||||||||||| |||||||||    
T  19094 aagccctctagaaaggttcagacgccctccagaagggctcatgaggccta 19143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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