View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1805_high_13 (Length: 247)
Name: NF1805_high_13
Description: NF1805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1805_high_13 |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 24 - 231
Target Start/End: Original strand, 41870423 - 41870630
Alignment:
| Q |
24 |
aaaagcatggttcatccaatagactaagtgtttgaaactgaggaggtatgactacaaaactataacatactgcaatgacaaattagaaaaagagaacttt |
123 |
Q |
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| T |
41870423 |
aaaagcatggttcatccaatagactaagtgtttgaaactgaggaggtatgactacaaaactataacatactgcaatgacaaattagaaaaagagaacttt |
41870522 |
T |
|
| Q |
124 |
acctggacaaacattgtaggaactgttagctgtaacagtgtatcatctctaactgcaccattaattccctggaacgatggcaacaaaattgatgtaatac |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41870523 |
acctggacaaacattgtaggaactgttagctgtaacagtgtatcatctctaactgcaccattaattccctggaacgatggcaacaaaattgatgtaatac |
41870622 |
T |
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| Q |
224 |
ttaattat |
231 |
Q |
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|||||||| |
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| T |
41870623 |
ttaattat |
41870630 |
T |
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