View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1805_low_10 (Length: 283)
Name: NF1805_low_10
Description: NF1805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1805_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 36697824 - 36698070
Alignment:
| Q |
1 |
aggttgctagggtatgatggaagacgccccactatgcatggccaaatgataaagttgcaacttttatggaagctcctgagagtcttgtaggtgtagctca |
100 |
Q |
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| T |
36697824 |
aggttgctagggtatgatggaagacgccccactatgcatggccaaatgataaagttgcaacttttatggaagctcctgagagtcttgtaggtgtagctca |
36697923 |
T |
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| Q |
101 |
gtcgatggctacgacatacaacattatttaaagggattgtaggtattgctcaattgatagctaaatgagacattatttatagggtcaggatttaaaactc |
200 |
Q |
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||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36697924 |
gtcgatggctacgacatacaatattatttaaaaggattgtaggtattgctcaattgatagctaaatgagacattatttatagggtcaggatttaaaactc |
36698023 |
T |
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| Q |
201 |
tgaatttctcacacttaatgtgtatgaatctaaccattatactactt |
247 |
Q |
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| |||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
36698024 |
taaatttctcacacttaatgtgtatgaatctaactattatactactt |
36698070 |
T |
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