View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1805_low_8 (Length: 306)
Name: NF1805_low_8
Description: NF1805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1805_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 19 - 280
Target Start/End: Complemental strand, 36698342 - 36698081
Alignment:
| Q |
19 |
atataacataggtcacacctcattaaccatgccatcaaaatgtatatttgaaaatcacgtatatttggacacaattgatcaacacctaaaagtaatggtt |
118 |
Q |
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| T |
36698342 |
atataacataggtcacacctcattaaccatgccatcaaaatgtatatttgaaaatcacgtatatttggacacaattgatcaacacctaaaagtaatggtt |
36698243 |
T |
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| Q |
119 |
aattaaacttgactaattgtattcactagatgattataagttgttatattaattaaccatttgttaaacgtacatattaatcatctaagttgttgtcgat |
218 |
Q |
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| T |
36698242 |
aatgaaacttgactaattgtattcactagatgattataagttgttatattaattaaccatttgttaaacttacatattaatcatctaagttgttgtcgat |
36698143 |
T |
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| Q |
219 |
ttttaatgttttatatcataactaaataacacaactatatatattgtcaatttgttaaggga |
280 |
Q |
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|||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
36698142 |
ttttgatgttttatatcataactaaataacacagctatatatattgtcaatttgttaaggga |
36698081 |
T |
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