View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18060_high_11 (Length: 261)
Name: NF18060_high_11
Description: NF18060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18060_high_11 |
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Alignment Details
Target: chr1 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 39272068 - 39271826
Alignment:
| Q |
1 |
ctgcatgtttgctgtccctttaactgttgaagttattgatattaacattttatcactttttcctttatctaatgtaacccttgtttttgtgaacttaact |
100 |
Q |
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| T |
39272068 |
ctgcatgtttgctgtccctttaactgttgaagttattgatattaacattttatcactttttcctttatctaatgtaacccttgtttttgtgaacttaact |
39271969 |
T |
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| Q |
101 |
ggacagatacatgtgccgcttgacccgcctcagtggaccttggatccaagaaaattgcttacatcaattactgagagaactaaagccattatactgaata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39271968 |
ggacagatacatgtgccgcttgacccgcctcagtggaccttggatccaagaaaattgcttacatcaattactgagagaactaaagccattatactgaata |
39271869 |
T |
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| Q |
201 |
ggttagaaattacacataaataatctcaaatgatttcatattt |
243 |
Q |
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| T |
39271868 |
ggttagaaattacacataaataatctcaaatgatttcatattt |
39271826 |
T |
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