View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18060_low_6 (Length: 364)
Name: NF18060_low_6
Description: NF18060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18060_low_6 |
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Alignment Details
Target: chr6 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 12 - 350
Target Start/End: Complemental strand, 13271267 - 13270929
Alignment:
| Q |
12 |
agaagggtacaaaatgaaatcgccacctgaaagaagtgataatgttggaagtgttaataagcagcaaattgaagaatatcttgaattgcatcttgctaca |
111 |
Q |
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| T |
13271267 |
agaagagtacaaaatgaaatcgccacctgaaagaagtgataatgttggaagtgttaataagcagcaaattgaagaatatcttgaattgaatcttgctaca |
13271168 |
T |
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| Q |
112 |
ccaagtgaaggtggaaatgttttggaacaatttggcaactatatgatgatgggaggatttgagatgttcagcgaatatactgatgtccatcagagatcaa |
211 |
Q |
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| T |
13271167 |
ccaactgaaagtggaattgttttggaacaatttggcaactatatgatgatgggagcatttgagatgtcgagtgaatatactgatgtccatcagaggtcaa |
13271068 |
T |
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| Q |
212 |
tcatagagaatgtgaatcttttatatgtttctccaatggaatacagtgactattcagttgatcaagttcacaaatcacaagatgctacaacatgtgttga |
311 |
Q |
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| T |
13271067 |
tcatagagaatgtgaatcttttatatgtttctccaatggaatacagtgactattcagttgatcaagttcacaaatcacaagatgctacaacatgtgttga |
13270968 |
T |
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| Q |
312 |
tacatcttcgggtgcgaatggtccattaaatgatgttga |
350 |
Q |
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| T |
13270967 |
tacatcttcgggtgcgaaaggtccattaaatgatgttga |
13270929 |
T |
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