View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18061_low_20 (Length: 274)
Name: NF18061_low_20
Description: NF18061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18061_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 4 - 259
Target Start/End: Original strand, 30493272 - 30493527
Alignment:
| Q |
4 |
aaaataaacttaaatccaagtgggtcaaatccagatggaccgtctaattaaattgagttctgctgaccctaaagagggaataagtgcccctattaaggta |
103 |
Q |
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| T |
30493272 |
aaaataaacttaaatccaagtgggtcaaatccagatggacagtctaattgaattgagttatgctgaccctaaagagggtataagtgcccctattaaggta |
30493371 |
T |
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| Q |
104 |
tgacttgattggcatttagtttcaaattaaaaactgtgtgccaactcacatatcacagtcacccacacacattcacttaattctctcttggatggggata |
203 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
30493372 |
tgacttgattggcatttggtttcaaattaaaaactgtgtgccaactcacatattacagtcacccacacacattcacttaattctctcttggatagggata |
30493471 |
T |
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| Q |
204 |
ccaactccccacattagccatacatgtgtcattctcataccatttctgtaagatgt |
259 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
30493472 |
ccaactccccacattagccatacatatgtcattctcataccatttctgtaagatgt |
30493527 |
T |
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