View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18064_high_5 (Length: 361)
Name: NF18064_high_5
Description: NF18064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18064_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 13 - 342
Target Start/End: Original strand, 35255484 - 35255813
Alignment:
| Q |
13 |
aatatccgcataagaaccctcccggcactaacccctaatatgaaatgatacatataaaaaagaagaataaaaatcagcaccaaaccattgcgatcgatat |
112 |
Q |
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| T |
35255484 |
aatatccgcataagaatcctcccggcactaacccctaatatgaaatgatacatataaaaaagaagaataaaaatcagcaccaaaccattgtgatcgatat |
35255583 |
T |
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| Q |
113 |
agttattctttacactaatctatgaattaaattaactaccaatgatttgatggtgattacacacattaaacgaattaaaaacagaatttttgttaaatag |
212 |
Q |
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| T |
35255584 |
agttattctttccactaatctatgaattaaattaactaccaatgatttgatggtgattacacacattaaacaaattaaaaacagaatttttgttaaatag |
35255683 |
T |
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| Q |
213 |
tccaagaatagcatgccagcaccttgatttcatcacttagctccatttgtcatgtttcttagaggttgtaggagatgaaacacaaccctctattccaatc |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35255684 |
tccaagaatagcatgccagcaccttgatttcatcacttagctccatttgtcatgtttcttagaggttgtaggagatgaaacacaaccctctattccaatc |
35255783 |
T |
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| Q |
313 |
acaaaaaacaattcaaactaacaaaagcta |
342 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
35255784 |
acaaaaaacaattcaaactaacaaaagcta |
35255813 |
T |
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