View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18065_high_14 (Length: 368)
Name: NF18065_high_14
Description: NF18065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18065_high_14 |
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Alignment Details
Target: chr1 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 349
Target Start/End: Complemental strand, 6723256 - 6722906
Alignment:
| Q |
1 |
accaacctataagcgtgatccattttgatagctctaacaaataaaaaaggtgatcataaattaacaattgtaatggtacgagcatcaatgacttgatcca |
100 |
Q |
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| T |
6723256 |
accaacctataagcctgatccattttgatagctctaacaaataaaaaaggtgatcataaattaacaattgtaatggtacgagcatcaaggactcgatcca |
6723157 |
T |
|
| Q |
101 |
attatcatctatgttccaacaatgaatttcactg-aaaaaataatgatcaaacttgataaagggaacaaaatcacgttagtttgtgttgaccactttgcc |
199 |
Q |
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| T |
6723156 |
attatcatttatgttccaacaatgaatttcactggaaaaaataatgatcaaacttgataaagggaacaaaatcacgttagtttgtgttgaccactttgcc |
6723057 |
T |
|
| Q |
200 |
tcaaagcatggtgcagcacatgattgtagatcctgcaccatctcaagaaacatcacgcctcataccgatatgcaaatcatgatttacacctcttgcattg |
299 |
Q |
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|||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
6723056 |
tcaaagcatggtgcagcacatgattgtagatcctccaacatctcaagaaacatcacgcctcataccgatatgcaaaccatgatttacacctcttgcattg |
6722957 |
T |
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| Q |
300 |
tcttcaagaatcatctcgttcaatgt-aggaaaacattgagtaccaacatg |
349 |
Q |
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|| ||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
6722956 |
tcgtcaagaatcatctcgttcaatgtcaggaaaacattgagtaccaacatg |
6722906 |
T |
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