View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18067_high_2 (Length: 272)
Name: NF18067_high_2
Description: NF18067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18067_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 8840243 - 8839988
Alignment:
| Q |
1 |
tctatcaacacgcgaaaatcttcttccaaaaacgccatcgctttctgttgaattttaccaacacgattggctattgactttcttctttcatctatggttt |
100 |
Q |
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| T |
8840243 |
tctatcaacacgcgaaaatcttcttccaaaaacgccatcgctttctgttgaattgtaccaacacgattggctattgactttcttctttcatctatggttt |
8840144 |
T |
|
| Q |
101 |
ctttttcatcatgaatcatcaacattttcttaagcttcgaaattcgatgcacagattcaagcaaccatttatctttctccataatctcttcccattttcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8840143 |
ctttttcatcatgaatcatcaacattttcttaagcttcgaaattcgatgcacagattcaagcaaccatttatctttctccataatctcttcccattttcc |
8840044 |
T |
|
| Q |
201 |
tttccgttctccagtttcattcttcaccatattctcctccacctgatccaaaaact |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8840043 |
tttccgttctccagtttcattcttcaccatattctcctccacctgatccaaaaact |
8839988 |
T |
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