View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18068_high_6 (Length: 721)
Name: NF18068_high_6
Description: NF18068
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18068_high_6 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 663; Significance: 0; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 663; E-Value: 0
Query Start/End: Original strand, 11 - 705
Target Start/End: Complemental strand, 2885992 - 2885298
Alignment:
| Q |
11 |
taggcacaatcgtttctaagtattagagatggcaatgggaattggggaaatattgtcacaattaggctcaattgcggctagccttatgtttgtttatgcc |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2885992 |
taggcacaatcgtttctaagtattagagatggcaatgggaattggggaaatattgtcacaattaggctcaattgcggctagccttatgtttgtttatgcc |
2885893 |
T |
|
| Q |
111 |
atgtatgagcaattctgcccatctgatcttcgtaagtttgttgaaaactacaaacacaaatttgcagatcttatgtccccttacatccaaataactttca |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
2885892 |
atgtatgagcaattctgcccatctgatcttcgtaagtttgttgaaaactacaaacacaaatttacagatcttatgtccccttacatccaaataactttca |
2885793 |
T |
|
| Q |
211 |
atgaatcatcgggcgagcgtctcaaacaaagcgaaacttacacaatcatccaaacatatcttggtgcgaactcgagtaaacgagccaaacgacttgaagc |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2885792 |
atgaatcatcgggcgagcgtctcaaacaaagcgaaacttacacaatcatccaaacatatcttggtgcgaactcgagtaaacgagccaaacgacttgaagc |
2885693 |
T |
|
| Q |
311 |
cgaagttgtggaagatagccaatccccgcttgtccttagcatggacgacaacgaagagatcgaagatgagttcaatggagtcaaagtttggtggtctgca |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2885692 |
cgaagttgtggaagatagccaatccccgcttgtccttagcatggacgacaacgaagagatcgaagatgagttcaatggagtcaaagtttggtggtctgca |
2885593 |
T |
|
| Q |
411 |
aatagcaaagctccaagaagaaaagcatcttcaggaagatctttcgatgtggtaagatgcttcaccctaactttccacaaaaggcatcgcgatctcatta |
510 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2885592 |
aatagcaaagctccaagaagaaaagcatcttcaggaagatctttcgatgtggtaagatgcttcaccctaactttccacaaaaggcatcgcgatctcatta |
2885493 |
T |
|
| Q |
511 |
cttcctcttacatacaacatgtgttggaccaaggaaaggctattatatttaagaataggcgactaaagctttacaccaacaatagcggttgttggtggat |
610 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
2885492 |
cttcctcttacatacaacatgtgttggaacaaggaaaggctattatatttaagaataggcgactaaagctttacaccaacaatggtggttgttggtggat |
2885393 |
T |
|
| Q |
611 |
ctcaggatggagtcacacaaattttgcgcaccctgcaaggtttgaaacacttgctatggaaccggagaagaaagaagagatcataaacgatcttg |
705 |
Q |
| |
|
|| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2885392 |
gtcggggtggagtcacacaaattttgcacaccctgcaaggtttgaaacacttgctatggaaccggagaagaaagaagagatcataaacgatcttg |
2885298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 529; E-Value: 0
Query Start/End: Original strand, 11 - 705
Target Start/End: Complemental strand, 2866806 - 2866108
Alignment:
| Q |
11 |
taggcacaatcgtttctaagtattagagatggcaatgggaattggggaaatattgtcacaattaggctcaattgcggctagccttatgtttgtttatgcc |
110 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |
|
|
| T |
2866806 |
taggcacaatagtttctaagtattagagatggcaatgggaattggggaaatattgtcacaattaggctcaattgccgctagcctaatgtttctttatgcc |
2866707 |
T |
|
| Q |
111 |
atgtatgagcaattctgcccatctgatcttcgtaagtttgttgaaaactacaaacacaaatttgcagatcttatgtcccctta-catccaaataactttc |
209 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||| |||| |||||||||||||| | ||||||||||||| |
|
|
| T |
2866706 |
atgtatgagcaattctgcccatctgatcttcataagtttgttgaaaagcacatgaacaaatttacagaccttatgtccccttaacgtccaaataactttt |
2866607 |
T |
|
| Q |
210 |
aatgaatcatcgggcgagcgtctcaaacaaagcgaaacttacacaatcatccaaacatatcttggtgcgaactcgagtaaacgagccaaacgacttgaag |
309 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| || ||||||| ||||| ||| |
|
|
| T |
2866606 |
tatgaatcatcggacgagcgtctcaaacaaagcgaaacttacacaattatccaaacatatcttggtgctaactcgagtcaaagagccaagagacttaaag |
2866507 |
T |
|
| Q |
310 |
ccgaagttgtggaagatagccaatccccgcttgtccttagcatggacgacaacgaagagatcgaagatgagttcaatggagtcaaagtttggtggtctgc |
409 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| | |
|
|
| T |
2866506 |
ccgaagttgtggaagatagccaatcaccgcttgtccttagcatggacgacaaagaagagattgaggatgagttcaatggagtcaaagtttggtggtcttc |
2866407 |
T |
|
| Q |
410 |
aaatagcaaagctccaagaagaaaagcatcttcaggaagatct---ttcgatgtggtaagatgcttcaccctaactttccacaaaaggcatcgcgatctc |
506 |
Q |
| |
|
||| ||||||||||||| |||||||||||||||||||||| || |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
2866406 |
aaacagcaaagctccaacaagaaaagcatcttcaggaagacctaatttcgatgtggtaagatacttaaccctaactttccacaaaaggcatcgcgatctc |
2866307 |
T |
|
| Q |
507 |
attacttcctcttacatacaacatgtgttggaccaaggaaaggctattatatttaagaataggcgactaaagctttacaccaacaatagcggttgttggt |
606 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2866306 |
attacttcctcttacatacaacatgtgttggaccaaggaaaggctgttatatttaagaataggcgactaaagctttacaccaacaatagcggttgttggt |
2866207 |
T |
|
| Q |
607 |
ggatctcaggatggagtcacacaaattttgcgcaccctgcaaggtttgaaacacttgctatggaaccggagaagaaagaagagatcataaacgatcttg |
705 |
Q |
| |
|
|||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2866206 |
ggatgtcggggtggagtcacacaaattttgcgcaccctgcaaggtttgaaacacttgctatggaaccggagaagaaagaagagatcataaacgatcttg |
2866108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 491; E-Value: 0
Query Start/End: Original strand, 59 - 705
Target Start/End: Complemental strand, 2861380 - 2860729
Alignment:
| Q |
59 |
aatattgtcacaattaggctcaattgcggctagccttatgttt--gtttatgccatgtatgagcaattctgcccatctgatcttcgtaagtttgttgaaa |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
2861380 |
aatattgtcacaattaggctcaattgcggctagcctaatgtttttgtttatgccatgtatgagcaattctgcccatctgatcttcataagtttgttgaaa |
2861281 |
T |
|
| Q |
157 |
actacaaacacaaatttgcagatcttatgtccccttacatccaaataactttcaatgaatcatcgggcgagcgtctcaaacaaagcgaaacttacacaat |
256 |
Q |
| |
|
| ||| |||||||| |||| ||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2861280 |
agcacatgaacaaatttacagaccttatgtccccttacgtcgaaataactttttatgaatcatcgggcgagcgtctcaaacaaagcgaaacttacacaat |
2861181 |
T |
|
| Q |
257 |
catccaaacatatcttggtgcgaactcgagtaaacgagccaaacgacttgaagccgaagttgtggaagatagccaatccccgcttgtccttagcatggac |
356 |
Q |
| |
|
|||||||||||||||||||| ||||||||| || ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2861180 |
tatccaaacatatcttggtgctaactcgagtcaaagagccaagagacttaaagccgaagttgtggaagatagccaatcaccgcttgtccttagcatggac |
2861081 |
T |
|
| Q |
357 |
gacaacgaagagatcgaagatgagttcaatggagtcaaagtttggtggtctgcaaatagcaaagctccaagaagaaaagcatcttcaggaagatct---t |
453 |
Q |
| |
|
||||| |||||||| || ||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||| || | |
|
|
| T |
2861080 |
gacaaagaagagattgaggatgagttcaatggagtcaaagtttggtggtcttcaaacagcaaagctccaacaagaaaagcatcttcaggaagacctaatt |
2860981 |
T |
|
| Q |
454 |
tcgatgtggtaagatgcttcaccctaactttccacaaaaggcatcgcgatctcattacttcctcttacatacaacatgtgttggaccaaggaaaggctat |
553 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
2860980 |
tcgatgtggtaagatacttaaccctaactttccacaaaaggcatcgcgatctcattacttcctcttacatacaacatgtgttggaacaaggaaaggctat |
2860881 |
T |
|
| Q |
554 |
tatatttaagaataggcgactaaagctttacaccaacaatagcggttgttggtggatctcaggatggagtcacacaaattttgcgcaccctgcaaggttt |
653 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
2860880 |
tatatttaagaataggcgactaaagctttacaccaacaatagcggttgttggtggatgtcagggtggagtcacacaaattttgcacaccctgcaaggttt |
2860781 |
T |
|
| Q |
654 |
gaaacacttgctatggaaccggagaagaaagaagagatcataaacgatcttg |
705 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2860780 |
gaaacacttgctatggaaccggagaagaaagaagagatcataaacgatcttg |
2860729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 107 - 592
Target Start/End: Complemental strand, 2910744 - 2910271
Alignment:
| Q |
107 |
tgccatgtatgagcaattctgcccatctgatcttcgtaagtttgttgaaaactacaaacacaaatttgcagatcttatgtccccttacatccaaataact |
206 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||||| |||||| ||| || | |||||||||| ||| |||||||||||| ||| |||||||| | |
|
|
| T |
2910744 |
tgccttgtatgagcaattctgcccttctgatcttcgtagatttgttcgaaaataaacgcacaaatttgtagaccttatgtcccctcacagccaaataagt |
2910645 |
T |
|
| Q |
207 |
ttcaatgaatcatcgggcgagcgtctcaaacaaagcgaaacttacacaatcatccaaacatatcttggtgcgaactcgagtaaacgagccaaacgacttg |
306 |
Q |
| |
|
||| ||| | ||| || |||| ||| ||||||| |||||||||||| |||||||||||||||||||||| ||||||||| || |||||| |
|
|
| T |
2910644 |
ttctttgagttatctggagagcccctcgaacaaagtgaaacttacacagtcatccaaacatatcttggtgctaactcgagtgaaagagcca--------- |
2910554 |
T |
|
| Q |
307 |
aagccgaagttgtggaagatagccaatccccgcttgtccttagcatggacgacaacgaagagatcgaagatgagttcaatggagtcaaagtttggtggtc |
406 |
Q |
| |
|
||||||| |||||||||||| | ||| || || || |||| |||||||||||||||||| ||||| || || |||||| || |||||||||| |
|
|
| T |
2910553 |
------aagttgtcgaagatagccaaactccggttatctttggcatagacgacaacgaagagatcaccgatgattttaaaggagtcgaaatttggtggtc |
2910460 |
T |
|
| Q |
407 |
tgcaaatagcaaagctccaagaagaaaagcatcttcaggaagatct--ttc-gatgtggtaagatgcttcaccctaactttccacaaaaggcatcgcgat |
503 |
Q |
| |
|
|||||| |||| | ||||| | ||| || |||||||||| || ||| |||||| |||||| | | |||||||| ||| ||||||||||| | ||| |
|
|
| T |
2910459 |
tgcaaacagcacaattccaacggcacaagaattttcaggaagacctaattcggatgtgataagatacctaaccctaaccttcgacaaaaggcatggtgat |
2910360 |
T |
|
| Q |
504 |
ctcattacttcctcttacatacaacatgtgttggaccaaggaaaggctattatatttaagaataggcgactaaagctttacaccaacaa |
592 |
Q |
| |
|
||||| ||| |||| ||||| ||||||||||| || |||||||| ||||| | ||||| |||| |||||||||||||| ||||| |
|
|
| T |
2910359 |
ctcatcactacctcgtacatccaacatgtgttagaacaaggaaaacctattgcacagaagaagaggcagctaaagctttacactaacaa |
2910271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 618 - 705
Target Start/End: Complemental strand, 2910231 - 2910144
Alignment:
| Q |
618 |
tggagtcacacaaattttgcgcaccctgcaaggtttgaaacacttgctatggaaccggagaagaaagaagagatcataaacgatcttg |
705 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
2910231 |
tggagtcacacaacttttgagcaccctgcaaggtttgaaacacttgctatggaaccggagaagaaggaagagatcataaacgatcttg |
2910144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 211 - 409
Target Start/End: Complemental strand, 2833929 - 2833731
Alignment:
| Q |
211 |
atgaatcatcgggcgagcgtctcaaacaaagcgaaacttacacaatcatccaaacatatcttggtgcgaactcgagtaaacgagccaaacgacttgaagc |
310 |
Q |
| |
|
|||||| ||| || || |||||||||||||| |||||||||| ||||||||||||||||||| ||| ||||| || |||| | | ||||| |||| |
|
|
| T |
2833929 |
atgaattatccggtgaacgtctcaaacaaagtgaaacttacaaaatcatccaaacatatcttagtgataactcatcccaaagagctagaagacttaaagc |
2833830 |
T |
|
| Q |
311 |
cgaagttgtggaagatagccaatccccgcttgtccttagcatggacgacaacgaagagatcgaagatgagttcaatggagtcaaagtttggtggtctgc |
409 |
Q |
| |
|
|||||||| ||||||||||| ||| |||||||| |||||||| || || ||||| ||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
2833829 |
tgaagttgtcaaagatagccaaaacccacttgtcctaagcatggatgataatgaagaaatcatagatgagttcaatggagtcaaagtttggtggactgc |
2833731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 45 - 570
Target Start/End: Original strand, 2841525 - 2842053
Alignment:
| Q |
45 |
atgggaattggggaaatattgtcacaattaggctcaattgcggctagccttatgtttgtttatgccatgtatgagcaattctgcccatctgatcttcgta |
144 |
Q |
| |
|
||||||||| ||||||||| |||| | |||||||||| ||||||| | |||||||| ||||||||||||||| |||||| |||| | | ||||||| |
|
|
| T |
2841525 |
atgggaattagggaaatatggtcaaacctaggctcaataatggctagcataatgtttgtatatgccatgtatgagaaattcttcccaccagcacttcgta |
2841624 |
T |
|
| Q |
145 |
agtttgttgaaaactacaaacacaaatttgcagatcttatgtccccttacatccaaataactttcaatgaatcatcgggcgagcgtctcaaacaaagcga |
244 |
Q |
| |
|
| | || ||| |||| |||||||| | | | |||| |||||||||| ||||||| ||| |||| ||| || || ||||||||| | | | |
|
|
| T |
2841625 |
gatatcttcgaaaatacactcacaaattcaccaacttcatgtacccttacatcaaaataaccttctatgagaaatcaggagataatctcaaacacaacaa |
2841724 |
T |
|
| Q |
245 |
aacttacacaatcatccaaacatatcttggtgcgaactcgagtaaacgagccaaacgacttgaagccgaagttgtggaagatagccaatccccgcttgtc |
344 |
Q |
| |
|
||| ||||||| |||||||||||||||| |||| ||||| || |||| | | ||||| |||| |||||| | ||||||||||| || ||||| |
|
|
| T |
2841725 |
aacatacacaaccatccaaacatatcttagtgctaactcttcacaaagagctagaagacttaaagctgaagttatcaaagatagccaaaatccacttgtt |
2841824 |
T |
|
| Q |
345 |
cttagcatggacgacaacgaagagatcgaagatgagttcaatggagtcaaagtttggtggtctgcaaatagcaaagctccaagaagaaaagcatcttcag |
444 |
Q |
| |
|
|| |||||||| |||||| |||||||| ||||||||||||||| ||||||||||||||||| |||||| || | |||||| | || ||| |||| |
|
|
| T |
2841825 |
ctaagcatggatgacaaccaagagatcacagatgagttcaatggtgtcaaagtttggtggtcagcaaatcacatcacctcaagaacacaatcattttcaa |
2841924 |
T |
|
| Q |
445 |
gaagatct--ttc-gatgtggtaagatgcttcaccctaactttccacaaaaggcatcgcgatctcattacttcctcttacatacaacatgtgttggacca |
541 |
Q |
| |
|
| || ||| |||| | ||||| ||| |||||||||||||| ||||||||||| || ||||| ||| ||||||||||||||||||| ||||| || |
|
|
| T |
2841925 |
tataccctagttcagatgagaaaagattcttaaccctaactttccataaaaggcatcgtgaactcatcactacctcttacatacaacatgttttggaaca |
2842024 |
T |
|
| Q |
542 |
aggaaaggctattatatttaagaataggc |
570 |
Q |
| |
|
|||||||||||| | | | |||||||||| |
|
|
| T |
2842025 |
aggaaaggctataacaatgaagaataggc |
2842053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 618 - 705
Target Start/End: Original strand, 2842113 - 2842200
Alignment:
| Q |
618 |
tggagtcacacaaattttgcgcaccctgcaaggtttgaaacacttgctatggaaccggagaagaaagaagagatcataaacgatcttg |
705 |
Q |
| |
|
||||||||||||| ||||| |||||| ||||| ||||||||||||||| ||||||| | |||||||||||||| |||| ||||||| |
|
|
| T |
2842113 |
tggagtcacacaacttttgagcacccggcaagttttgaaacacttgctttggaaccaaaaaagaaagaagagattctaaatgatcttg |
2842200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 464 - 586
Target Start/End: Complemental strand, 2833673 - 2833551
Alignment:
| Q |
464 |
aagatgcttcaccctaactttccacaaaaggcatcgcgatctcattacttcctcttacatacaacatgtgttggaccaaggaaaggctattatatttaag |
563 |
Q |
| |
|
||||| ||| |||||||| ||||| |||| |||||| || |||| ||| |||||||||| |||||||||||||| ||||||| ||||||| ||| |
|
|
| T |
2833673 |
aagattcttaaccctaaccttccataaaaagcatcgtgaagtcatcactacctcttacattcaacatgtgttggatgaaggaaaatctattatgagcaag |
2833574 |
T |
|
| Q |
564 |
aataggcgactaaagctttacac |
586 |
Q |
| |
|
||||||| ||||||||||||||| |
|
|
| T |
2833573 |
aataggcaactaaagctttacac |
2833551 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 705
Target Start/End: Original strand, 14577872 - 14577938
Alignment:
| Q |
639 |
caccctgcaaggtttgaaacacttgctatggaaccggagaagaaagaagagatcataaacgatcttg |
705 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| | |||||||||||||||| ||| ||||||||| |
|
|
| T |
14577872 |
caccctgcaaggttcgaaacacttgctatggatgcaaagaagaaagaagagataatagacgatcttg |
14577938 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 474 - 592
Target Start/End: Original strand, 2828594 - 2828712
Alignment:
| Q |
474 |
accctaactttccacaaaaggcatcgcgatctcattacttcctcttacatacaacatgtgttggaccaaggaaaggctattatatttaagaataggcgac |
573 |
Q |
| |
|
|||||||| |||||||||| |||| || || |||||| ||||| || ||||||||||| || |||||||||||||||| ||| ||||||||| | |
|
|
| T |
2828594 |
accctaaccttccacaaaaaatatcgtgagcttattactaggtcttatatccaacatgtgttagaacaaggaaaggctattacattgaagaataggaagc |
2828693 |
T |
|
| Q |
574 |
taaagctttacaccaacaa |
592 |
Q |
| |
|
| |||||||| |||||||| |
|
|
| T |
2828694 |
ttaagctttataccaacaa |
2828712 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 554
Target Start/End: Original strand, 14577701 - 14577778
Alignment:
| Q |
477 |
ctaactttccacaaaaggcatcgcgatctcattacttcctcttacatacaacatgtgttggaccaaggaaaggctatt |
554 |
Q |
| |
|
||||| |||||||||||| | || | |||||| ||| |||||||||||||| |||||||||| ||||||| |||||| |
|
|
| T |
14577701 |
ctaaccttccacaaaaggtaccgtggtctcatcactacctcttacatacaatatgtgttggatgaaggaaaagctatt |
14577778 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 308 - 404
Target Start/End: Original strand, 2828448 - 2828544
Alignment:
| Q |
308 |
agccgaagttgtggaagatagccaatccccgcttgtccttagcatggacgacaacgaagagatcgaagatgagttcaatggagtcaaagtttggtgg |
404 |
Q |
| |
|
|||||||||||| ||| |||| ||| | || |||||||||| ||| || || || ||||||||| |||| | ||||||||||||||| |||||||| |
|
|
| T |
2828448 |
agccgaagttgtcgaaaatagtcaaactccacttgtccttaccattgatgataatgaagagatcatagataaattcaatggagtcaaaatttggtgg |
2828544 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 618 - 704
Target Start/End: Complemental strand, 2833507 - 2833421
Alignment:
| Q |
618 |
tggagtcacacaaattttgcgcaccctgcaaggtttgaaacacttgctatggaaccggagaagaaagaagagatcataaacgatctt |
704 |
Q |
| |
|
|||| |||||||| ||||| ||| |||||||| |||| ||| || ||||||||||| || |||||| ||||||| |||| |||||| |
|
|
| T |
2833507 |
tggaatcacacaacttttgagcatcctgcaagatttggaaccctagctatggaaccagaaaagaaacaagagattttaaatgatctt |
2833421 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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