View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18068_high_63 (Length: 327)

Name: NF18068_high_63
Description: NF18068
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18068_high_63
NF18068_high_63
[»] chr7 (18 HSPs)
chr7 (1-319)||(46531412-46531730)
chr7 (28-312)||(46523852-46524140)
chr7 (85-122)||(31338471-31338508)
chr7 (79-122)||(31341151-31341194)
chr7 (79-120)||(5006581-5006622)
chr7 (90-122)||(819830-819862)
chr7 (78-122)||(7243600-7243644)
chr7 (79-122)||(39591537-39591580)
chr7 (84-122)||(30456520-30456558)
chr7 (84-122)||(45593789-45593827)
chr7 (79-120)||(1417221-1417262)
chr7 (78-119)||(17989096-17989137)
chr7 (79-120)||(18749882-18749923)
chr7 (79-120)||(24975861-24975902)
chr7 (83-112)||(30160970-30160999)
chr7 (79-119)||(9527163-9527203)
chr7 (84-120)||(23918919-23918955)
chr7 (79-119)||(45777244-45777284)
[»] chr4 (18 HSPs)
chr4 (84-122)||(46013370-46013408)
chr4 (86-121)||(19429559-19429594)
chr4 (84-119)||(46247180-46247215)
chr4 (78-120)||(43372041-43372083)
chr4 (84-122)||(56007648-56007686)
chr4 (78-119)||(50745956-50745997)
chr4 (84-120)||(54325109-54325145)
chr4 (79-114)||(3662305-3662340)
chr4 (78-123)||(437501-437546)
chr4 (79-112)||(3175908-3175941)
chr4 (79-120)||(27623592-27623633)
chr4 (78-115)||(30743321-30743358)
chr4 (79-120)||(51630068-51630109)
chr4 (79-120)||(54327521-54327562)
chr4 (84-120)||(927438-927474)
chr4 (88-120)||(2883940-2883972)
chr4 (78-122)||(10192240-10192284)
chr4 (84-120)||(32724081-32724117)
[»] chr3 (13 HSPs)
chr3 (84-122)||(31337471-31337509)
chr3 (79-120)||(49586988-49587029)
chr3 (85-120)||(1816546-1816581)
chr3 (126-173)||(7475774-7475821)
chr3 (79-118)||(38462238-38462277)
chr3 (79-121)||(22232783-22232825)
chr3 (78-119)||(33965564-33965605)
chr3 (79-120)||(42808936-42808977)
chr3 (84-116)||(659899-659931)
chr3 (79-119)||(20192679-20192719)
chr3 (81-113)||(34254888-34254920)
chr3 (84-112)||(40122832-40122860)
chr3 (79-119)||(54775085-54775125)
[»] chr2 (22 HSPs)
chr2 (79-119)||(13866846-13866886)
chr2 (78-119)||(3102649-3102690)
chr2 (79-120)||(10143129-10143170)
chr2 (81-113)||(44438918-44438950)
chr2 (87-122)||(33192158-33192193)
chr2 (78-120)||(3458613-3458655)
chr2 (86-120)||(5043632-5043666)
chr2 (78-120)||(6546934-6546976)
chr2 (84-122)||(14666510-14666548)
chr2 (78-120)||(18962110-18962152)
chr2 (79-120)||(5133729-5133770)
chr2 (87-120)||(7103555-7103588)
chr2 (79-120)||(17952773-17952814)
chr2 (85-122)||(36863695-36863732)
chr2 (84-120)||(11513860-11513896)
chr2 (84-120)||(14209239-14209275)
chr2 (84-120)||(28803578-28803614)
chr2 (84-112)||(29429837-29429865)
chr2 (79-119)||(33256697-33256737)
chr2 (84-112)||(33942112-33942140)
chr2 (90-122)||(37053562-37053594)
chr2 (87-119)||(43299476-43299508)
[»] chr8 (10 HSPs)
chr8 (79-122)||(8066911-8066954)
chr8 (79-116)||(20672729-20672766)
chr8 (79-122)||(2100762-2100805)
chr8 (79-113)||(40728497-40728531)
chr8 (79-112)||(3537111-3537144)
chr8 (79-112)||(10437842-10437875)
chr8 (75-120)||(45071156-45071200)
chr8 (86-118)||(26479743-26479775)
chr8 (82-122)||(29056061-29056101)
chr8 (79-115)||(38561683-38561719)
[»] chr6 (15 HSPs)
chr6 (79-122)||(10154178-10154221)
chr6 (79-120)||(29274301-29274342)
chr6 (78-122)||(9582668-9582712)
chr6 (85-120)||(32386171-32386206)
chr6 (84-122)||(8349734-8349772)
chr6 (87-121)||(9027542-9027576)
chr6 (85-122)||(323774-323811)
chr6 (78-119)||(2027479-2027520)
chr6 (79-120)||(4006671-4006712)
chr6 (79-120)||(7785814-7785855)
chr6 (79-111)||(4420574-4420606)
chr6 (84-120)||(4420607-4420643)
chr6 (79-119)||(5328931-5328971)
chr6 (84-120)||(7713987-7714023)
chr6 (84-120)||(9326918-9326954)
[»] chr5 (12 HSPs)
chr5 (79-120)||(14295463-14295504)
chr5 (79-119)||(28586839-28586879)
chr5 (86-122)||(41277420-41277456)
chr5 (79-122)||(37063144-37063187)
chr5 (78-120)||(583845-583887)
chr5 (84-122)||(39750105-39750143)
chr5 (79-112)||(29117010-29117043)
chr5 (87-120)||(32059661-32059694)
chr5 (79-120)||(32969189-32969230)
chr5 (79-120)||(35135734-35135775)
chr5 (84-112)||(985595-985623)
chr5 (84-120)||(36539708-36539744)
[»] chr1 (15 HSPs)
chr1 (79-120)||(15360851-15360892)
chr1 (85-121)||(4548684-4548720)
chr1 (66-110)||(15566718-15566762)
chr1 (86-122)||(43420222-43420258)
chr1 (78-122)||(46980199-46980243)
chr1 (80-119)||(4215330-4215369)
chr1 (79-122)||(48064266-48064309)
chr1 (86-120)||(40833907-40833941)
chr1 (78-119)||(11560622-11560663)
chr1 (82-119)||(15565905-15565942)
chr1 (84-120)||(2522598-2522634)
chr1 (84-120)||(27738252-27738288)
chr1 (84-120)||(28788610-28788646)
chr1 (85-117)||(38219873-38219905)
chr1 (82-122)||(51190821-51190861)
[»] scaffold0020 (1 HSPs)
scaffold0020 (79-108)||(160056-160085)


Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 319
Target Start/End: Original strand, 46531412 - 46531730
Alignment:
Q  1 aaactgagagattcaatattcttgtgtcaatttcggtgggctagttcgagttcttaaaaaataccttaatcaagtgcttatagcaaaagataaaataaag 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46531412 aaactgagagattcgatattcttgtgtcaatttcggtgggctagttcgagttcttaaaaaataccttaatcaagtgcttatagcaaaagataaaataaag 46531511  T
Q  101 tcaaactgtttttatataagtttggtattttcaaatgccatttgaagagcttatgaaaataagaatctcaaaagaacctcctaaattctattaaacaatc 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46531512 tcaaactgtttttatataagtttggtattttcagatgccatttgaagagcttatgaaaataagaatctcaaaagaacctcctaaattctattaaacaatc 46531611  T
Q  201 tcacaaaccgtaaatcctctcaattaaatctatcccaacaggcgtttggtaatccactgatcctacatcagtatcatgtcaatagcccacatcaaacacc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46531612 tcacaaaccgtaaatcctctcaattaaatctatcccaacaggcgtttagtaatccactgatcctacatcagtatcatgtcaatagcccacatcaaacacc 46531711  T
Q  301 actcaaactaaagtattat 319  Q
    |||||||| ||||||||||    
T  46531712 actcaaacaaaagtattat 46531730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 28 - 312
Target Start/End: Original strand, 46523852 - 46524140
Alignment:
Q  28 caatttcggtgggctagttcgagttctt-aaaaaataccttaatcaagtgcttatagcaaaagataaaataaagtcaaactgtttttatataagttt--- 123  Q
    ||||||||||  ||||||| ||  |||| |||||| | ||| ||||||||||||||| | |||||||| |||||| |||||||| || |||||||||       
T  46523852 caatttcggtctgctagtttgacatcttcaaaaaaaatcttgatcaagtgcttatagtagaagataaactaaagttaaactgttcttgtataagttttaa 46523951  T
Q  124 ggtattttcaaatgccatttgaagagcttatgaaaataagaatctcaaaagaacctcctaaattctattaaacaatctcacaaaccgtaaatcctctcaa 223  Q
    | |||||||| || | ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  46523952 gttattttcacatactattcgaagagcttatgaaaataagcatctcaaaacaacctcctaaattctattaaacaatctcacaaaccataaatcctctcaa 46524051  T
Q  224 ttaaatctatcccaacaggcgtttggtaatccactgatcctacatcagtatcatgtcaatagcccacatcaaacaccactcaaactaaa 312  Q
     ||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  46524052 ataaatctatccaaacaggcgtttagtaatccactaatcctacatcagtatcatgtcaataacccacataaaaaaccactcaaactaaa 46524140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 31338471 - 31338508
Alignment:
Q  85 aaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31338471 aaaagataaaataaagtcaaactgtttttatataagtt 31338508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 31341151 - 31341194
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    |||| ||||||||||||||||||||||||| |||||||||||||    
T  31341151 tataacaaaagataaaataaagtcaaactggttttatataagtt 31341194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 5006622 - 5006581
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||| ||||||||||||||||||||||||||||| |||||||    
T  5006622 tataacaaaagataaaataaagtcaaactgttttcatataag 5006581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 819862 - 819830
Alignment:
Q  90 ataaaataaagtcaaactgtttttatataagtt 122  Q
    |||||||||||||||||||||||||||||||||    
T  819862 ataaaataaagtcaaactgtttttatataagtt 819830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 7243600 - 7243644
Alignment:
Q  78 ttatagcaaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||||    
T  7243600 ttataacaaaagataaaataacgtcaaacagtttttatataagtt 7243644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 39591580 - 39591537
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    |||| |||||||||||||||||||||| |||||| |||||||||    
T  39591580 tataacaaaagataaaataaagtcaaattgttttcatataagtt 39591537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 30456558 - 30456520
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  30456558 caaaagataaaataaagtcaaattgttttcatataagtt 30456520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 45593827 - 45593789
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  45593827 caaaacataaaataaagtcaaactgttttcatataagtt 45593789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 1417221 - 1417262
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||| |||||||||||||||||||||| |||||| |||||||    
T  1417221 tataacaaaagataaaataaagtcaaattgttttcatataag 1417262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 119
Target Start/End: Complemental strand, 17989137 - 17989096
Alignment:
Q  78 ttatagcaaaagataaaataaagtcaaactgtttttatataa 119  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||    
T  17989137 ttataacaaaatataaaataaagtcaaactgttttcatataa 17989096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 18749923 - 18749882
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||| ||||||||||| |||||||||||| ||||||||||||    
T  18749923 tataacaaaagataaagtaaagtcaaactatttttatataag 18749882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 24975861 - 24975902
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||| ||||||||||||||||| | |||||||||||||||||    
T  24975861 tataacaaaagataaaataaaggcgaactgtttttatataag 24975902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 112
Target Start/End: Complemental strand, 30160999 - 30160970
Alignment:
Q  83 gcaaaagataaaataaagtcaaactgtttt 112  Q
    ||||||||||||||||||||||||||||||    
T  30160999 gcaaaagataaaataaagtcaaactgtttt 30160970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 9527203 - 9527163
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataa 119  Q
    |||| ||||||||| ||||||||||||||||||| ||||||    
T  9527203 tataacaaaagatataataaagtcaaactgttttcatataa 9527163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 23918919 - 23918955
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||||||||||||||||||||| |||||| |||||||    
T  23918919 caaaagataaaataaagtcaaattgttttcatataag 23918955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 45777284 - 45777244
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataa 119  Q
    |||| ||||||||||||| ||||||||||||||| ||||||    
T  45777284 tataacaaaagataaaattaagtcaaactgttttcatataa 45777244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 46013408 - 46013370
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  46013408 caaaagataaaataaagtcaaactgtttttatataagtt 46013370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 121
Target Start/End: Complemental strand, 19429594 - 19429559
Alignment:
Q  86 aaagataaaataaagtcaaactgtttttatataagt 121  Q
    ||||||||||||||||||||||||||||||||||||    
T  19429594 aaagataaaataaagtcaaactgtttttatataagt 19429559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 119
Target Start/End: Original strand, 46247180 - 46247215
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataa 119  Q
    ||||||||||||||||||||||||||||||||||||    
T  46247180 caaaagataaaataaagtcaaactgtttttatataa 46247215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 43372083 - 43372041
Alignment:
Q  78 ttatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    ||||| |||||||||||||| ||||||||||||||||||||||    
T  43372083 ttataacaaaagataaaatacagtcaaactgtttttatataag 43372041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 56007648 - 56007686
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  56007648 caaaagaaaaaataaagtcaaactgtttttatataagtt 56007686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 119
Target Start/End: Original strand, 50745956 - 50745997
Alignment:
Q  78 ttatagcaaaagataaaataaagtcaaactgtttttatataa 119  Q
    ||||| |||||||||||||||| |||||||||||||||||||    
T  50745956 ttataacaaaagataaaataaaatcaaactgtttttatataa 50745997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 54325145 - 54325109
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataag 120  Q
    ||||||||||||||||||||||||||||| |||||||    
T  54325145 caaaagataaaataaagtcaaactgttttcatataag 54325109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 114
Target Start/End: Original strand, 3662305 - 3662340
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgttttta 114  Q
    |||| |||||||||||||||||||||||||||||||    
T  3662305 tataacaaaagataaaataaagtcaaactgttttta 3662340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 437546 - 437501
Alignment:
Q  78 ttatagcaaaagataaaataaagtcaaactgtttttatataagttt 123  Q
    |||||||||||||||||||||||| ||| ||| || ||||||||||    
T  437546 ttatagcaaaagataaaataaagttaaattgtgttcatataagttt 437501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 112
Target Start/End: Original strand, 3175908 - 3175941
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttt 112  Q
    ||||||||||||||||||||||||||| ||||||    
T  3175908 tatagcaaaagataaaataaagtcaaattgtttt 3175941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 27623592 - 27623633
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||| |||||||||||||||||||||||| |||| |||||||    
T  27623592 tataacaaaagataaaataaagtcaaactattttaatataag 27623633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 30743321 - 30743358
Alignment:
Q  78 ttatagcaaaagataaaataaagtcaaactgtttttat 115  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  30743321 ttataacaaaagataaaataaagtcaaactgtctttat 30743358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 51630068 - 51630109
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    ||||||||||||||||||||||| ||| |||||| |||||||    
T  51630068 tatagcaaaagataaaataaagttaaattgttttgatataag 51630109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 54327562 - 54327521
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||| |||||||||||| |||||||||||||||| |||||||    
T  54327562 tataacaaaagataaaacaaagtcaaactgttttcatataag 54327521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 927438 - 927474
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||||||| |||||||||||||||||||| |||||||    
T  927438 caaaagatgaaataaagtcaaactgttttcatataag 927474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 2883972 - 2883940
Alignment:
Q  88 agataaaataaagtcaaactgtttttatataag 120  Q
    ||||||||||||||||||| |||||||||||||    
T  2883972 agataaaataaagtcaaacagtttttatataag 2883940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 10192240 - 10192284
Alignment:
Q  78 ttatagcaaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    ||||| ||||||||| |||||||||||| |||||| |||||||||    
T  10192240 ttataacaaaagatagaataaagtcaaattgttttcatataagtt 10192284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 32724081 - 32724117
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||||||||||||||||||||||| |||| |||||||    
T  32724081 caaaagataaaataaagtcaaactattttcatataag 32724117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 31337509 - 31337471
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31337509 caaaagataaaataaagtcaaactgtttttatataagtt 31337471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 49587029 - 49586988
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||| ||||||||||||||||||||||||||||| |||||||    
T  49587029 tataacaaaagataaaataaagtcaaactgttttcatataag 49586988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 120
Target Start/End: Original strand, 1816546 - 1816581
Alignment:
Q  85 aaaagataaaataaagtcaaactgtttttatataag 120  Q
    ||||||||||||||||||||||||||||| ||||||    
T  1816546 aaaagataaaataaagtcaaactgtttttgtataag 1816581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 7475821 - 7475774
Alignment:
Q  126 tattttcaaatgccatttgaagagcttatgaaaataagaatctcaaaa 173  Q
    ||||||||  ||| |||||||||||||||||||||||| |||||||||    
T  7475821 tattttcatgtgctatttgaagagcttatgaaaataagcatctcaaaa 7475774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 38462238 - 38462277
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatata 118  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  38462238 tataccaaaagataaaataaagtcaaactgttttcatata 38462277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 121
Target Start/End: Original strand, 22232783 - 22232825
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataagt 121  Q
    |||| |||| |||||||||||||||||||||||| ||||||||    
T  22232783 tataacaaatgataaaataaagtcaaactgttttcatataagt 22232825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 119
Target Start/End: Complemental strand, 33965605 - 33965564
Alignment:
Q  78 ttatagcaaaagataaaataaagtcaaactgtttttatataa 119  Q
    ||||| |||||| |||||||||||||||||||||| ||||||    
T  33965605 ttataacaaaaggtaaaataaagtcaaactgttttcatataa 33965564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 42808936 - 42808977
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||| |||||||||||||||||| ||| ||||||||||||||    
T  42808936 tataacaaaagataaaataaagttaaattgtttttatataag 42808977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 659931 - 659899
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttata 116  Q
    |||||||||||||||||||||||| ||||||||    
T  659931 caaaagataaaataaagtcaaactatttttata 659899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 20192719 - 20192679
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataa 119  Q
    |||| ||||||||||||||||||||||| ||||| ||||||    
T  20192719 tataacaaaagataaaataaagtcaaacagttttcatataa 20192679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 113
Target Start/End: Complemental strand, 34254920 - 34254888
Alignment:
Q  81 tagcaaaagataaaataaagtcaaactgttttt 113  Q
    ||||||| |||||||||||||||||||||||||    
T  34254920 tagcaaatgataaaataaagtcaaactgttttt 34254888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 112
Target Start/End: Complemental strand, 40122860 - 40122832
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttt 112  Q
    |||||||||||||||||||||||||||||    
T  40122860 caaaagataaaataaagtcaaactgtttt 40122832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 54775085 - 54775125
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataa 119  Q
    |||| |||||||||||||||||||||||  |||||||||||    
T  54775085 tataacaaaagataaaataaagtcaaaccatttttatataa 54775125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000008; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 13866846 - 13866886
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataa 119  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  13866846 tatagcaaaagataaaattaagtcaaactgtttttatataa 13866886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 119
Target Start/End: Original strand, 3102649 - 3102690
Alignment:
Q  78 ttatagcaaaagataaaataaagtcaaactgtttttatataa 119  Q
    ||||||||||| |||||||||||||||||| |||||||||||    
T  3102649 ttatagcaaaatataaaataaagtcaaactatttttatataa 3102690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 10143129 - 10143170
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||| ||||||||||||| |||||||||||||||||||||||    
T  10143129 tataacaaaagataaaattaagtcaaactgtttttatataag 10143170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 113
Target Start/End: Complemental strand, 44438950 - 44438918
Alignment:
Q  81 tagcaaaagataaaataaagtcaaactgttttt 113  Q
    |||||||||||||||||||||||||||||||||    
T  44438950 tagcaaaagataaaataaagtcaaactgttttt 44438918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 33192158 - 33192193
Alignment:
Q  87 aagataaaataaagtcaaactgtttttatataagtt 122  Q
    |||||||||||||||||||||||||| |||||||||    
T  33192158 aagataaaataaagtcaaactgttttcatataagtt 33192193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 3458613 - 3458655
Alignment:
Q  78 ttatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    ||||| |||||||||||||||||||||||| |||| |||||||    
T  3458613 ttataacaaaagataaaataaagtcaaacttttttcatataag 3458655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 120
Target Start/End: Complemental strand, 5043666 - 5043632
Alignment:
Q  86 aaagataaaataaagtcaaactgtttttatataag 120  Q
    ||||||||||||||||||||||||||| |||||||    
T  5043666 aaagataaaataaagtcaaactgttttcatataag 5043632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 6546934 - 6546976
Alignment:
Q  78 ttatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||    
T  6546934 ttataacaaaagataaaataaagtcaaattgtttatatataag 6546976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 14666510 - 14666548
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  14666510 caaaagataaaataaagtcaaactgatttcatataagtt 14666548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 18962152 - 18962110
Alignment:
Q  78 ttatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    ||||| |||||||||||||||||| |||||||||| |||||||    
T  18962152 ttataacaaaagataaaataaagttaaactgttttcatataag 18962110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 5133729 - 5133770
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||| |||||||||||||||||  ||||||||||||||||||    
T  5133729 tataacaaaagataaaataaagataaactgtttttatataag 5133770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 120
Target Start/End: Complemental strand, 7103588 - 7103555
Alignment:
Q  87 aagataaaataaagtcaaactgtttttatataag 120  Q
    |||||||||||||||||||||||||| |||||||    
T  7103588 aagataaaataaagtcaaactgttttaatataag 7103555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 17952814 - 17952773
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||| |||||||||||||||||||||||| |||| |||||||    
T  17952814 tataacaaaagataaaataaagtcaaactattttcatataag 17952773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 36863732 - 36863695
Alignment:
Q  85 aaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  36863732 aaaagataaaataaagtcaaacaatttttatataagtt 36863695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 11513860 - 11513896
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||||||||||||||||||||| |||||| |||||||    
T  11513860 caaaagataaaataaagtcaaattgttttcatataag 11513896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 14209239 - 14209275
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||||||||||||||| |||||||||||| |||||||    
T  14209239 caaaagataaaataaattcaaactgttttcatataag 14209275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 28803614 - 28803578
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataag 120  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  28803614 caaaagataaaataaagtcaaactgatttcatataag 28803578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 112
Target Start/End: Complemental strand, 29429865 - 29429837
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttt 112  Q
    |||||||||||||||||||||||||||||    
T  29429865 caaaagataaaataaagtcaaactgtttt 29429837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 33256697 - 33256737
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataa 119  Q
    |||| ||| ||||||||||||||||||||||||| ||||||    
T  33256697 tataacaatagataaaataaagtcaaactgttttcatataa 33256737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 112
Target Start/End: Original strand, 33942112 - 33942140
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttt 112  Q
    |||||||||||||||||||||||||||||    
T  33942112 caaaagataaaataaagtcaaactgtttt 33942140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 122
Target Start/End: Original strand, 37053562 - 37053594
Alignment:
Q  90 ataaaataaagtcaaactgtttttatataagtt 122  Q
    ||||||||||||||||||||||| |||||||||    
T  37053562 ataaaataaagtcaaactgttttcatataagtt 37053594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 119
Target Start/End: Complemental strand, 43299508 - 43299476
Alignment:
Q  87 aagataaaataaagtcaaactgtttttatataa 119  Q
    ||||||||||||||||||||||||||| |||||    
T  43299508 aagataaaataaagtcaaactgtttttgtataa 43299476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 8066954 - 8066911
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    |||| ||||||||||||||||||||||||| |||||||||||||    
T  8066954 tataacaaaagataaaataaagtcaaactggttttatataagtt 8066911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 20672729 - 20672766
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttata 116  Q
    |||| |||||||||||||||||||||||||||||||||    
T  20672729 tataacaaaagataaaataaagtcaaactgtttttata 20672766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 2100762 - 2100805
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    ||||||||||||||||||||||||||| | |||| |||||||||    
T  2100762 tatagcaaaagataaaataaagtcaaaatattttcatataagtt 2100805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 113
Target Start/End: Complemental strand, 40728531 - 40728497
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgttttt 113  Q
    |||| ||||||||||||||||||||||||||||||    
T  40728531 tataacaaaagataaaataaagtcaaactgttttt 40728497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 112
Target Start/End: Complemental strand, 3537144 - 3537111
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttt 112  Q
    ||||||||||||||||||||||||||| ||||||    
T  3537144 tatagcaaaagataaaataaagtcaaattgtttt 3537111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 112
Target Start/End: Original strand, 10437842 - 10437875
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttt 112  Q
    |||| |||||||||||||||||||||||||||||    
T  10437842 tataacaaaagataaaataaagtcaaactgtttt 10437875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 45071156 - 45071200
Alignment:
Q  75 tgcttatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||||||| ||||||| |||||||||||||| ||||||||||||||    
T  45071156 tgcttata-caaaagacaaaataaagtcaaattgtttttatataag 45071200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 118
Target Start/End: Original strand, 26479743 - 26479775
Alignment:
Q  86 aaagataaaataaagtcaaactgtttttatata 118  Q
    |||||||||||||| ||||||||||||||||||    
T  26479743 aaagataaaataaaatcaaactgtttttatata 26479775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 29056101 - 29056061
Alignment:
Q  82 agcaaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    |||||||||||||||||||||||  |||||| |||||||||    
T  29056101 agcaaaagataaaataaagtcaatttgttttcatataagtt 29056061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 38561683 - 38561719
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttat 115  Q
    |||| |||||||||||||||||||||||| |||||||    
T  38561683 tataacaaaagataaaataaagtcaaactatttttat 38561719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 10154178 - 10154221
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    ||||| |||||||||||||||||||||||||||| |||||||||    
T  10154178 tatagaaaaagataaaataaagtcaaactgttttcatataagtt 10154221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 29274342 - 29274301
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    ||||||||||||||||||||||||||| |||||| |||||||    
T  29274342 tatagcaaaagataaaataaagtcaaattgttttcatataag 29274301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 9582712 - 9582668
Alignment:
Q  78 ttatagcaaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||||    
T  9582712 ttataacaaaagataaaataaagtgaaattgtttttatataagtt 9582668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 120
Target Start/End: Complemental strand, 32386206 - 32386171
Alignment:
Q  85 aaaagataaaataaagtcaaactgtttttatataag 120  Q
    ||||||||||||||||| ||||||||||||||||||    
T  32386206 aaaagataaaataaagtaaaactgtttttatataag 32386171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 8349772 - 8349734
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  8349772 caaaagataaaataaagttaaattgtttttatataagtt 8349734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 121
Target Start/End: Original strand, 9027542 - 9027576
Alignment:
Q  87 aagataaaataaagtcaaactgtttttatataagt 121  Q
    |||||||||||||||||||||||||| ||||||||    
T  9027542 aagataaaataaagtcaaactgttttaatataagt 9027576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 323774 - 323811
Alignment:
Q  85 aaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    ||||||||||||||| |||||||||||| |||||||||    
T  323774 aaaagataaaataaattcaaactgttttcatataagtt 323811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 119
Target Start/End: Complemental strand, 2027520 - 2027479
Alignment:
Q  78 ttatagcaaaagataaaataaagtcaaactgtttttatataa 119  Q
    ||||| |||||||||||||||||||||||| |||| ||||||    
T  2027520 ttataacaaaagataaaataaagtcaaactattttcatataa 2027479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 4006671 - 4006712
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||| |||| ||||||||||||||||| ||||||||||||||    
T  4006671 tataacaaatgataaaataaagtcaaattgtttttatataag 4006712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 7785855 - 7785814
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||| |||||||||||||||||||||||| |||| |||||||    
T  7785855 tataccaaaagataaaataaagtcaaactcttttcatataag 7785814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 4420574 - 4420606
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgttt 111  Q
    |||| ||||||||||||||||||||||||||||    
T  4420574 tataacaaaagataaaataaagtcaaactgttt 4420606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 4420607 - 4420643
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  4420607 caaaagataaaataaagtcaaactatttttgtataag 4420643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 5328931 - 5328971
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataa 119  Q
    |||| |||||||||||||||||||||||  |||||||||||    
T  5328931 tataacaaaagataaaataaagtcaaaccatttttatataa 5328971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 7713987 - 7714023
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||||||||||||||||||||| |||||| |||||||    
T  7713987 caaaagataaaataaagtcaaattgttttcatataag 7714023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 9326918 - 9326954
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||| |||| |||||||||||||||||||||||||||    
T  9326918 caaatgatataataaagtcaaactgtttttatataag 9326954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000005; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 14295463 - 14295504
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||| ||||||||||||||||||||||||||||| |||||||    
T  14295463 tataacaaaagataaaataaagtcaaactgttttcatataag 14295504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 28586879 - 28586839
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataa 119  Q
    |||| ||||||||||||||||||||||||||||| ||||||    
T  28586879 tataacaaaagataaaataaagtcaaactgttttcatataa 28586839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 41277456 - 41277420
Alignment:
Q  86 aaagataaaataaagtcaaactgtttttatataagtt 122  Q
    ||||||||||||||||||||||||||| |||||||||    
T  41277456 aaagataaaataaagtcaaactgttttcatataagtt 41277420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 37063187 - 37063144
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    |||| |||||||||||||||||||||||| |||| |||||||||    
T  37063187 tataacaaaagataaaataaagtcaaactattttcatataagtt 37063144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 583887 - 583845
Alignment:
Q  78 ttatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    ||||| || |||||||||||||||||||||||||| |||||||    
T  583887 ttataacagaagataaaataaagtcaaactgttttcatataag 583845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 39750105 - 39750143
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  39750105 caaaagataaaataaagtcaaactattttcatataagtt 39750143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 112
Target Start/End: Complemental strand, 29117043 - 29117010
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttt 112  Q
    |||| |||||||||||||||||||||||||||||    
T  29117043 tataacaaaagataaaataaagtcaaactgtttt 29117010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 120
Target Start/End: Complemental strand, 32059694 - 32059661
Alignment:
Q  87 aagataaaataaagtcaaactgtttttatataag 120  Q
    |||||||||||||||||||||||||| |||||||    
T  32059694 aagataaaataaagtcaaactgttttcatataag 32059661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 32969230 - 32969189
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||| |||||||||||||||||||||| | ||||||||||||    
T  32969230 tataacaaaagataaaataaagtcaaattatttttatataag 32969189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 35135775 - 35135734
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||| |||||||||||||||||||||||| |||| |||||||    
T  35135775 tataacaaaagataaaataaagtcaaactattttcatataag 35135734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 112
Target Start/End: Original strand, 985595 - 985623
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttt 112  Q
    |||||||||||||||||||||||||||||    
T  985595 caaaagataaaataaagtcaaactgtttt 985623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 36539708 - 36539744
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataag 120  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  36539708 caaaagataaaataaagtcaacctgttttcatataag 36539744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000005; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 15360851 - 15360892
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||| ||||||||||||||||||||||||||||| |||||||    
T  15360851 tataacaaaagataaaataaagtcaaactgttttcatataag 15360892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 4548684 - 4548720
Alignment:
Q  85 aaaagataaaataaagtcaaactgtttttatataagt 121  Q
    |||||||||||||||||||||||||||||||| ||||    
T  4548684 aaaagataaaataaagtcaaactgtttttatacaagt 4548720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 15566762 - 15566718
Alignment:
Q  66 ttaatcaagtgcttatagcaaaagataaaataaagtcaaactgtt 110  Q
    ||||| ||| |||||||||| ||||||||||||||||||||||||    
T  15566762 ttaattaagagcttatagcataagataaaataaagtcaaactgtt 15566718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 43420222 - 43420258
Alignment:
Q  86 aaagataaaataaagtcaaactgtttttatataagtt 122  Q
    |||||||||||||||||||||| ||||||||||||||    
T  43420222 aaagataaaataaagtcaaactttttttatataagtt 43420258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 46980243 - 46980199
Alignment:
Q  78 ttatagcaaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||    
T  46980243 ttatatcaaaagataaaataaagacaaactgttttcatataagtt 46980199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 119
Target Start/End: Original strand, 4215330 - 4215369
Alignment:
Q  80 atagcaaaagataaaataaagtcaaactgtttttatataa 119  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  4215330 atagcaaatgataaaataaagtcaaactgttttcatataa 4215369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 48064266 - 48064309
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||    
T  48064266 tatagcaaaagataaaataaagtaaaactatttttgtataagtt 48064309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 120
Target Start/End: Complemental strand, 40833941 - 40833907
Alignment:
Q  86 aaagataaaataaagtcaaactgtttttatataag 120  Q
    |||||||||||||| ||||||||||||||||||||    
T  40833941 aaagataaaataaaatcaaactgtttttatataag 40833907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 119
Target Start/End: Complemental strand, 11560663 - 11560622
Alignment:
Q  78 ttatagcaaaagataaaataaagtcaaactgtttttatataa 119  Q
    ||||||||||||||||||| || ||||| |||||||||||||    
T  11560663 ttatagcaaaagataaaatcaaatcaaattgtttttatataa 11560622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 15565942 - 15565905
Alignment:
Q  82 agcaaaagataaaataaagtcaaactgtttttatataa 119  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  15565942 agcaaaagataaaataaagtcaaactatttttgtataa 15565905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 2522598 - 2522634
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||||||||||||||||| |||||| |||||||||||    
T  2522598 caaaagataaaataaagttaaactgattttatataag 2522634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 27738288 - 27738252
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||||||||||||||||||||| |||||| |||||||    
T  27738288 caaaagataaaataaagtcaaattgttttcatataag 27738252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 28788646 - 28788610
Alignment:
Q  84 caaaagataaaataaagtcaaactgtttttatataag 120  Q
    |||| |||||||||||||||||||||||| |||||||    
T  28788646 caaaggataaaataaagtcaaactgttttcatataag 28788610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 38219873 - 38219905
Alignment:
Q  85 aaaagataaaataaagtcaaactgtttttatat 117  Q
    ||||||||||||||||||||| |||||||||||    
T  38219873 aaaagataaaataaagtcaaattgtttttatat 38219905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 51190821 - 51190861
Alignment:
Q  82 agcaaaagataaaataaagtcaaactgtttttatataagtt 122  Q
    |||||||||||||||||||| ||| ||||||| ||||||||    
T  51190821 agcaaaagataaaataaagttaaattgtttttgtataagtt 51190861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 160085 - 160056
Alignment:
Q  79 tatagcaaaagataaaataaagtcaaactg 108  Q
    ||||||||||||||||||||||||||||||    
T  160085 tatagcaaaagataaaataaagtcaaactg 160056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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